Lsi01G020760 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G020760
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Nodulin-like domain-containing protein
Location	chr01: 29276903 .. 29277775 (-)
RNA-Seq Expression	Lsi01G020760
Synteny	Lsi01G020760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGATACCAGTACAACCACCGTCACTGCAACCAACGATAACGATGAGTCATTGGTACAAAAACATCTTCACGGGACGACCCCCGCTCGGAGACGACCACACCATCTTGCAAGCAATTTTGAGTGTGGAAATGGCAATTCTATTCATGGCGACAACGTGCGGTGTCGGAGGAGCGTTGACGGTGGTCGATAACGTTGCACAAATCGGTGCTTCGTTAGACTATCCAGCTCGTAGCATTTCGAGTTTTGTGTCACTAATGAGCATTTGGAACTTCCTAGGTCGTGTAATGGCAGGGTATGTTTCTGAATTTCTTTTGATAAAGTATGGATTAGCTCGACCGTTGATGCTCACTTTTGTAATATTAATGTCTTGCATTGGCCATATTCTGATTGCGTTTGGTGTCCCAAACTCTCTCTATTTTGCCTCCATCATTACTGGATTCTGCTTGGGAGCGCAACTACCATTAACGGCCACGATCATATCCGATCTTTTTGGATTGAAACATTATTCGACGTTGTACAACGTGGGATCCGTGTCGAGCCCTGTCGGATCGTACATTTTCAATGTTAGAGTGGCGGGTAGGGTTTATGATAGAGAAGGGGAAAGGCAGATGAGTGATGATATCACAAAAGCATGTAAAGGGGTGGGATGTTATAGGCTTAGTTTTTTAATAATCATAGGGGCTTGTGTTTTTGGGACTTTAGTTTCGGTGGTTTTGGTGCATAGGACAAGAGCGTTTTACAAAGATGATATTTATGCGAGGTTTAGAGAGAGAGAAGAAATTACAACACCAAACACTACTACTACCACTCTTTCTACTTCTACTACTCTTCCCCTTACACAACAAACAGAATCGAGTAAATGTGTGTAA

mRNA sequence

ATGTCGATACCAGTACAACCACCGTCACTGCAACCAACGATAACGATGAGTCATTGGTACAAAAACATCTTCACGGGACGACCCCCGCTCGGAGACGACCACACCATCTTGCAAGCAATTTTGAGTGTGGAAATGGCAATTCTATTCATGGCGACAACGTGCGGTGTCGGAGGAGCGTTGACGGTGGTCGATAACGTTGCACAAATCGGTGCTTCGTTAGACTATCCAGCTCGTAGCATTTCGAGTTTTGTGTCACTAATGAGCATTTGGAACTTCCTAGGTCGTGTAATGGCAGGGTATGTTTCTGAATTTCTTTTGATAAAGTATGGATTAGCTCGACCGTTGATGCTCACTTTTGTAATATTAATGTCTTGCATTGGCCATATTCTGATTGCGTTTGGTGTCCCAAACTCTCTCTATTTTGCCTCCATCATTACTGGATTCTGCTTGGGAGCGCAACTACCATTAACGGCCACGATCATATCCGATCTTTTTGGATTGAAACATTATTCGACGTTGTACAACGTGGGATCCGTGTCGAGCCCTGTCGGATCGTACATTTTCAATGTTAGAGTGGCGGGTAGGGTTTATGATAGAGAAGGGGAAAGGCAGATGAGTGATGATATCACAAAAGCATGTAAAGGGGTGGGATGTTATAGGCTTAGTTTTTTAATAATCATAGGGGCTTGTGTTTTTGGGACTTTAGTTTCGGTGGTTTTGGTGCATAGGACAAGAGCGTTTTACAAAGATGATATTTATGCGAGGTTTAGAGAGAGAGAAGAAATTACAACACCAAACACTACTACTACCACTCTTTCTACTTCTACTACTCTTCCCCTTACACAACAAACAGAATCGAGTAAATGTGTGTAA

Coding sequence (CDS)

ATGTCGATACCAGTACAACCACCGTCACTGCAACCAACGATAACGATGAGTCATTGGTACAAAAACATCTTCACGGGACGACCCCCGCTCGGAGACGACCACACCATCTTGCAAGCAATTTTGAGTGTGGAAATGGCAATTCTATTCATGGCGACAACGTGCGGTGTCGGAGGAGCGTTGACGGTGGTCGATAACGTTGCACAAATCGGTGCTTCGTTAGACTATCCAGCTCGTAGCATTTCGAGTTTTGTGTCACTAATGAGCATTTGGAACTTCCTAGGTCGTGTAATGGCAGGGTATGTTTCTGAATTTCTTTTGATAAAGTATGGATTAGCTCGACCGTTGATGCTCACTTTTGTAATATTAATGTCTTGCATTGGCCATATTCTGATTGCGTTTGGTGTCCCAAACTCTCTCTATTTTGCCTCCATCATTACTGGATTCTGCTTGGGAGCGCAACTACCATTAACGGCCACGATCATATCCGATCTTTTTGGATTGAAACATTATTCGACGTTGTACAACGTGGGATCCGTGTCGAGCCCTGTCGGATCGTACATTTTCAATGTTAGAGTGGCGGGTAGGGTTTATGATAGAGAAGGGGAAAGGCAGATGAGTGATGATATCACAAAAGCATGTAAAGGGGTGGGATGTTATAGGCTTAGTTTTTTAATAATCATAGGGGCTTGTGTTTTTGGGACTTTAGTTTCGGTGGTTTTGGTGCATAGGACAAGAGCGTTTTACAAAGATGATATTTATGCGAGGTTTAGAGAGAGAGAAGAAATTACAACACCAAACACTACTACTACCACTCTTTCTACTTCTACTACTCTTCCCCTTACACAACAAACAGAATCGAGTAAATGTGTGTAA

Protein sequence

MSIPVQPPSLQPTITMSHWYKNIFTGRPPLGDDHTILQAILSVEMAILFMATTCGVGGALTVVDNVAQIGASLDYPARSISSFVSLMSIWNFLGRVMAGYVSEFLLIKYGLARPLMLTFVILMSCIGHILIAFGVPNSLYFASIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSVSSPVGSYIFNVRVAGRVYDREGERQMSDDITKACKGVGCYRLSFLIIIGACVFGTLVSVVLVHRTRAFYKDDIYARFREREEITTPNTTTTTLSTSTTLPLTQQTESSKCV

Homology

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BLAST of Lsi01G020760 vs. ExPASy Swiss-Prot
Match: Q6CGU8 (Probable transporter MCH1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=MCH1 PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 3.6e-11
Identity = 55/207 (26.57%), Postives = 110/207 (53.14%), Query Frame = 0


Query: 31  GDDHTILQAILSVEMAILFMATTCGVGGALTVVDNVAQIGASLD------YPARSISSFV 90
           G +   L+   + + A LF+     +GG   +  N   +GA LD        + S S+ V
Sbjct: 259 GHEGATLKEFFTDKTAWLFLLCFVFIGGPFEMFQN--NMGAILDTVTVENADSPSFSTHV 318

Query: 91  SLMSIWNFLGRVMAGYVSEFLLIKYGLARPLMLTFVILMSCIGHILIAFGV----PNSLY 150
           SL + ++ + R++ G+ SE   ++  ++RP++L+ + L++   H+++  G+     N+ Y
Sbjct: 319 SLFATFSTVSRLVVGFSSE--AMESHVSRPVLLSVIALVAACIHLMVPSGIFTVFDNAKY 378

Query: 151 FA--SIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSVSSPVGSYIFNVRVAGRVYD 210
           F+  +I+ GF  G+   L  TI++ ++G+ +  T++    ++  VGS  + +  A +VYD
Sbjct: 379 FSVVTIVNGFSYGSSFTLVPTIVTKVWGIANLGTIWGSFILALAVGSLGYGLLFA-KVYD 438

Query: 211 REGERQMSDDITKACKGVGCYRLSFLI 226
              E  +   +++ C GV CY L+F+I
Sbjct: 439 AASEVGVG-SMSQVCSGVHCYGLTFVI 459

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BLAST of Lsi01G020760 vs. ExPASy Swiss-Prot
Match: Q96TW9 (Probable transporter MCH1 OS=Wickerhamomyces anomalus OX=4927 GN=MCH1 PE=3 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.7e-05
Identity = 40/164 (24.39%), Postives = 81/164 (49.39%), Query Frame = 0


Query: 37  LQAILSVEMAILFMATTCGVGGALTVVDNVAQIGASLDYPARSISSFVSLMSIWNFLGRV 96
           L+ I  +   +L  +    +G +   + N+  +  ++  P   IS  V++ ++++ L R+
Sbjct: 256 LKFIKDISTYVLLFSLLLSIGPSEMYITNMGSLVKAIT-PNSLISDQVAIHAVFSTLSRL 315

Query: 97  MAGYVSEFLLIKYGLARPLMLTFVILMSCIGHILIAFG--VPNSLYFASIITGFCLGAQL 156
             G +S+FL+  Y ++R  +L  +I++     I IA    V +  Y  S ++GF  G   
Sbjct: 316 SLGALSDFLVTNYQISRSWLLLSIIVLGFFTQIFIATSTFVKDQYYIISALSGFSYGGLF 375

Query: 157 PLTATIISDLFGLKHYSTLYNVGSVSSPVGSYIFNVRVAGRVYD 199
            L  T+I  ++G + + + +    ++  +GS  F + V G VYD
Sbjct: 376 TLYPTVIFSIWGPEIFGSAWGSFMIAPAIGSTTFGM-VFGLVYD 417

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BLAST of Lsi01G020760 vs. ExPASy TrEMBL
Match: A0A0A0L178 (Nodulin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G507390 PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 1.3e-93
Identity = 184/205 (89.76%), Postives = 191/205 (93.17%), Query Frame = 0


Query: 2   SIPVQPPSLQPTI--TMSHWYKNIFTGRPPLGDDHTILQAILSVEMAILFMATTCGVGGA 61
           SI VQ PS Q T     S+WYKNIFTGRP LGDDHTILQAILSV+MAILF+ TTCGVGGA
Sbjct: 282 SILVQSPSPQLTTMSRSSNWYKNIFTGRPMLGDDHTILQAILSVDMAILFVVTTCGVGGA 341

Query: 62  LTVVDNVAQIGASLDYPARSISSFVSLMSIWNFLGRVMAGYVSEFLLIKYGLARPLMLTF 121
           LTVVDNVAQIGASLDYP RSISSFVSLMSIWNFLGRVMAGYVSEFLLIKY L RPLMLTF
Sbjct: 342 LTVVDNVAQIGASLDYPTRSISSFVSLMSIWNFLGRVMAGYVSEFLLIKYRLPRPLMLTF 401

Query: 122 VILMSCIGHILIAFGVPNSLYFASIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSV 181
           VIL+SCIGHI+IAFGVPNSLYFASIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSV
Sbjct: 402 VILLSCIGHIMIAFGVPNSLYFASIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSV 461

Query: 182 SSPVGSYIFNVRVAGRVYDREGERQ 205
           SSPVGSYIFNVR+AGR+YDREGERQ
Sbjct: 462 SSPVGSYIFNVRLAGRIYDREGERQ 486

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BLAST of Lsi01G020760 vs. ExPASy TrEMBL
Match: A0A5D3C4Y9 (Protein NUCLEAR FUSION DEFECTIVE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G001510 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 7.4e-92
Identity = 177/197 (89.85%), Postives = 182/197 (92.39%), Query Frame = 0


Query: 8   PSLQPTITMSHWYKNIFTGRPPLGDDHTILQAILSVEMAILFMATTCGVGGALTVVDNVA 67
           P L      S+WYKNIFTGRP  GDDHTILQAILSV+MAILFMATTCGVGG LTVVDNVA
Sbjct: 290 PHLTTMSRSSNWYKNIFTGRPVFGDDHTILQAILSVDMAILFMATTCGVGGVLTVVDNVA 349

Query: 68  QIGASLDYPARSISSFVSLMSIWNFLGRVMAGYVSEFLLIKYGLARPLMLTFVILMSCIG 127
           QIGASLDYP RSISSFVSLMSIWNFLGRVMAGYVSEFLL+KY   RPLMLTFVIL+SCIG
Sbjct: 350 QIGASLDYPTRSISSFVSLMSIWNFLGRVMAGYVSEFLLMKYRFPRPLMLTFVILLSCIG 409

Query: 128 HILIAFGVPNSLYFASIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSVSSPVGSYI 187
           HI+IAFGVPNSLYF SIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSVSSPVGSYI
Sbjct: 410 HIMIAFGVPNSLYFVSIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSVSSPVGSYI 469

Query: 188 FNVRVAGRVYDREGERQ 205
           FNVRVAGRVYDREGERQ
Sbjct: 470 FNVRVAGRVYDREGERQ 486

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BLAST of Lsi01G020760 vs. ExPASy TrEMBL
Match: A0A6J1AS77 (protein NUCLEAR FUSION DEFECTIVE 4-like OS=Herrania umbratica OX=108875 GN=LOC110420692 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 6.7e-85
Identity = 163/247 (65.99%), Postives = 197/247 (79.76%), Query Frame = 0


Query: 21  KNIFTGRPPLGDDHTILQAILSVEMAILFMATTCGVGGALTVVDNVAQIGASLDYPARSI 80
           KN+F   P  G+D+TILQAI S++M ILF+AT CG GGALTV+DN+ Q+G SL YP  SI
Sbjct: 301 KNMFK-PPDRGEDYTILQAIFSIDMLILFLATACGTGGALTVIDNLGQLGKSLGYPTHSI 360

Query: 81  SSFVSLMSIWNFLGRVMAGYVSEFLLIKYGLARPLMLTFVILMSCIGHILIAFGVPNSLY 140
           S+F+SL+SIWNFLGRV+AGY+SE +L KY   RPLMLTFVIL+SC+GH+LIAF VPNSLY
Sbjct: 361 STFISLVSIWNFLGRVLAGYLSEIVLTKYNFPRPLMLTFVILLSCVGHLLIAFAVPNSLY 420

Query: 141 FASIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSVSSPVGSYIFNVRVAGRVYDRE 200
           FAS++TGFCLGAQLPL   IIS+LFGLKHYST+YNVGSVSSPVGSYIFNVRVAG +YD+E
Sbjct: 421 FASVMTGFCLGAQLPLLCAIISELFGLKHYSTMYNVGSVSSPVGSYIFNVRVAGHLYDKE 480

Query: 201 GERQM---------SDDITKACKGVGCYRLSFLIIIGACVFGTLVSVVLVHRTRAFYKDD 259
             +QM           D+   C G  CYRL+FLII  A +FG++VS++LV RTR FYK D
Sbjct: 481 AVKQMEALGRTREPGQDLN--CSGAKCYRLAFLIITAATLFGSIVSLILVFRTRTFYKGD 540

[Close]

BLAST of Lsi01G020760 vs. ExPASy TrEMBL
Match: A0A6P6AMM9 (uncharacterized protein LOC111311019 OS=Durio zibethinus OX=66656 GN=LOC111311019 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 8.7e-85
Identity = 166/250 (66.40%), Postives = 197/250 (78.80%), Query Frame = 0


Query: 21  KNIFTGRPPLGDDHTILQAILSVEMAILFMATTCGVGGALTVVDNVAQIGASLDYPARSI 80
           KNIF   P  G+D+TILQAI S +M ILF+AT CG GGALTV DN+ Q+G SL YP  SI
Sbjct: 319 KNIFK-PPERGEDYTILQAIFSTDMLILFIATACGTGGALTVFDNLGQLGKSLGYPTHSI 378

Query: 81  SSFVSLMSIWNFLGRVMAGYVSEFLLIKYGLARPLMLTFVILMSCIGHILIAFGVPNSLY 140
           S+F+SL+SIWNFLGRV+AGY+SE +L KY   RPLMLTFVIL+SC+GH+LIAF VPNSLY
Sbjct: 379 STFISLVSIWNFLGRVLAGYLSEIVLTKYNFPRPLMLTFVILLSCVGHLLIAFAVPNSLY 438

Query: 141 FASIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSVSSPVGSYIFNVRVAGRVYDRE 200
           FAS++TGFCLGAQLPL   IIS+LFGLKHYST+YNVGSVSSPVGSYIFNVRVAG +YD+E
Sbjct: 439 FASVMTGFCLGAQLPLLCAIISELFGLKHYSTMYNVGSVSSPVGSYIFNVRVAGHLYDKE 498

Query: 201 GERQM---------SDDITKACKGVGCYRLSFLIIIGACVFGTLVSVVLVHRTRAFYKDD 260
             +QM           D+T  C G  CYRL+FLII  A +FG++VS++LV RTR FYK D
Sbjct: 499 ALKQMEALGLGRKPGQDLT--CSGAICYRLAFLIITAASLFGSIVSLILVFRTRTFYKGD 558

Query: 261 IYARFREREE 262
           IY +F+E  E
Sbjct: 559 IYKKFQEEVE 565

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BLAST of Lsi01G020760 vs. ExPASy TrEMBL
Match: A0A061EU62 (Major facilitator superfamily protein, putative OS=Theobroma cacao OX=3641 GN=TCM_022284 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.6e-83
Identity = 159/240 (66.25%), Postives = 192/240 (80.00%), Query Frame = 0


Query: 28  PPLGDDHTILQAILSVEMAILFMATTCGVGGALTVVDNVAQIGASLDYPARSISSFVSLM 87
           P  G+D+TILQAI S++M ILF+AT CG GGALTV+DN+ Q+G SL YP  SIS+F+SL+
Sbjct: 274 PDRGEDYTILQAIFSIDMLILFIATACGTGGALTVIDNLGQLGKSLGYPTHSISAFISLV 333

Query: 88  SIWNFLGRVMAGYVSEFLLIKYGLARPLMLTFVILMSCIGHILIAFGVPNSLYFASIITG 147
           SIWNFLGRV+AGY+SE +L KY   RPLMLTFVIL+SC+GH+LIAF VPNSLYFAS++TG
Sbjct: 334 SIWNFLGRVLAGYLSEIVLTKYNFPRPLMLTFVILLSCVGHLLIAFAVPNSLYFASVMTG 393

Query: 148 FCLGAQLPLTATIISDLFGLKHYSTLYNVGSVSSPVGSYIFNVRVAGRVYDREGERQM-- 207
           FCLGAQLPL   IIS+LFGLKHYST+YNVGSVSSPVGSYIFNVRVAG +YD+E  +Q   
Sbjct: 394 FCLGAQLPLLCAIISELFGLKHYSTMYNVGSVSSPVGSYIFNVRVAGHLYDKEAVKQTEA 453

Query: 208 -------SDDITKACKGVGCYRLSFLIIIGACVFGTLVSVVLVHRTRAFYKDDIYARFRE 259
                    D+   C G  CYRL+FLII  A +FG++VS++LV RTR FYK DIY +F+E
Sbjct: 454 LGRTRKPGQDLN--CSGAKCYRLAFLIITAATLFGSIVSLILVFRTRTFYKGDIYKKFKE 511

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BLAST of Lsi01G020760 vs. NCBI nr
Match: XP_004146405.3 (protein NUCLEAR FUSION DEFECTIVE 4 [Cucumis sativus] >KAE8649721.1 hypothetical protein Csa_011975 [Cucumis sativus])

HSP 1 Score: 433.3 bits (1113), Expect = 1.6e-117
Identity = 231/279 (82.80%), Postives = 249/279 (89.25%), Query Frame = 0


Query: 2   SIPVQPPSLQPTI--TMSHWYKNIFTGRPPLGDDHTILQAILSVEMAILFMATTCGVGGA 61
           SI VQ PS Q T     S+WYKNIFTGRP LGDDHTILQAILSV+MAILF+ TTCGVGGA
Sbjct: 282 SILVQSPSPQLTTMSRSSNWYKNIFTGRPMLGDDHTILQAILSVDMAILFVVTTCGVGGA 341

Query: 62  LTVVDNVAQIGASLDYPARSISSFVSLMSIWNFLGRVMAGYVSEFLLIKYGLARPLMLTF 121
           LTVVDNVAQIGASLDYP RSISSFVSLMSIWNFLGRVMAGYVSEFLLIKY L RPLMLTF
Sbjct: 342 LTVVDNVAQIGASLDYPTRSISSFVSLMSIWNFLGRVMAGYVSEFLLIKYRLPRPLMLTF 401

Query: 122 VILMSCIGHILIAFGVPNSLYFASIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSV 181
           VIL+SCIGHI+IAFGVPNSLYFASIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSV
Sbjct: 402 VILLSCIGHIMIAFGVPNSLYFASIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSV 461

Query: 182 SSPVGSYIFNVRVAGRVYDREGERQMSDDITKACKGVGCYRLSFLIIIGACVFGTLVSVV 241
           SSPVGSYIFNVR+AGR+YDREGERQ  + +   CKGV CYR+SF+IIIGACVFG+LVSV+
Sbjct: 462 SSPVGSYIFNVRLAGRIYDREGERQ-RNVMRNVCKGVRCYRVSFIIIIGACVFGSLVSVI 521

Query: 242 LVHRTRAFYKDDIYARFREREEITTPNTTTTTLSTSTTL 279
           LV RTR FYKDDIYARFR+ EEI +P   TTT +T+ +L
Sbjct: 522 LVLRTRNFYKDDIYARFRKGEEIKSPLQDTTTTTTTFSL 559

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BLAST of Lsi01G020760 vs. NCBI nr
Match: TYK05449.1 (protein NUCLEAR FUSION DEFECTIVE 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 347.1 bits (889), Expect = 1.5e-91
Identity = 177/197 (89.85%), Postives = 182/197 (92.39%), Query Frame = 0


Query: 8   PSLQPTITMSHWYKNIFTGRPPLGDDHTILQAILSVEMAILFMATTCGVGGALTVVDNVA 67
           P L      S+WYKNIFTGRP  GDDHTILQAILSV+MAILFMATTCGVGG LTVVDNVA
Sbjct: 290 PHLTTMSRSSNWYKNIFTGRPVFGDDHTILQAILSVDMAILFMATTCGVGGVLTVVDNVA 349

Query: 68  QIGASLDYPARSISSFVSLMSIWNFLGRVMAGYVSEFLLIKYGLARPLMLTFVILMSCIG 127
           QIGASLDYP RSISSFVSLMSIWNFLGRVMAGYVSEFLL+KY   RPLMLTFVIL+SCIG
Sbjct: 350 QIGASLDYPTRSISSFVSLMSIWNFLGRVMAGYVSEFLLMKYRFPRPLMLTFVILLSCIG 409

Query: 128 HILIAFGVPNSLYFASIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSVSSPVGSYI 187
           HI+IAFGVPNSLYF SIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSVSSPVGSYI
Sbjct: 410 HIMIAFGVPNSLYFVSIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSVSSPVGSYI 469

Query: 188 FNVRVAGRVYDREGERQ 205
           FNVRVAGRVYDREGERQ
Sbjct: 470 FNVRVAGRVYDREGERQ 486

[Close]

BLAST of Lsi01G020760 vs. NCBI nr
Match: XP_021289741.1 (protein NUCLEAR FUSION DEFECTIVE 4-like [Herrania umbratica])

HSP 1 Score: 323.9 bits (829), Expect = 1.4e-84
Identity = 163/247 (65.99%), Postives = 197/247 (79.76%), Query Frame = 0


Query: 21  KNIFTGRPPLGDDHTILQAILSVEMAILFMATTCGVGGALTVVDNVAQIGASLDYPARSI 80
           KN+F   P  G+D+TILQAI S++M ILF+AT CG GGALTV+DN+ Q+G SL YP  SI
Sbjct: 301 KNMFK-PPDRGEDYTILQAIFSIDMLILFLATACGTGGALTVIDNLGQLGKSLGYPTHSI 360

Query: 81  SSFVSLMSIWNFLGRVMAGYVSEFLLIKYGLARPLMLTFVILMSCIGHILIAFGVPNSLY 140
           S+F+SL+SIWNFLGRV+AGY+SE +L KY   RPLMLTFVIL+SC+GH+LIAF VPNSLY
Sbjct: 361 STFISLVSIWNFLGRVLAGYLSEIVLTKYNFPRPLMLTFVILLSCVGHLLIAFAVPNSLY 420

Query: 141 FASIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSVSSPVGSYIFNVRVAGRVYDRE 200
           FAS++TGFCLGAQLPL   IIS+LFGLKHYST+YNVGSVSSPVGSYIFNVRVAG +YD+E
Sbjct: 421 FASVMTGFCLGAQLPLLCAIISELFGLKHYSTMYNVGSVSSPVGSYIFNVRVAGHLYDKE 480

Query: 201 GERQM---------SDDITKACKGVGCYRLSFLIIIGACVFGTLVSVVLVHRTRAFYKDD 259
             +QM           D+   C G  CYRL+FLII  A +FG++VS++LV RTR FYK D
Sbjct: 481 AVKQMEALGRTREPGQDLN--CSGAKCYRLAFLIITAATLFGSIVSLILVFRTRTFYKGD 540

[Close]

BLAST of Lsi01G020760 vs. NCBI nr
Match: XP_022766129.1 (uncharacterized protein LOC111311019 [Durio zibethinus])

HSP 1 Score: 323.6 bits (828), Expect = 1.8e-84
Identity = 166/250 (66.40%), Postives = 197/250 (78.80%), Query Frame = 0


Query: 21  KNIFTGRPPLGDDHTILQAILSVEMAILFMATTCGVGGALTVVDNVAQIGASLDYPARSI 80
           KNIF   P  G+D+TILQAI S +M ILF+AT CG GGALTV DN+ Q+G SL YP  SI
Sbjct: 319 KNIFK-PPERGEDYTILQAIFSTDMLILFIATACGTGGALTVFDNLGQLGKSLGYPTHSI 378

Query: 81  SSFVSLMSIWNFLGRVMAGYVSEFLLIKYGLARPLMLTFVILMSCIGHILIAFGVPNSLY 140
           S+F+SL+SIWNFLGRV+AGY+SE +L KY   RPLMLTFVIL+SC+GH+LIAF VPNSLY
Sbjct: 379 STFISLVSIWNFLGRVLAGYLSEIVLTKYNFPRPLMLTFVILLSCVGHLLIAFAVPNSLY 438

Query: 141 FASIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSVSSPVGSYIFNVRVAGRVYDRE 200
           FAS++TGFCLGAQLPL   IIS+LFGLKHYST+YNVGSVSSPVGSYIFNVRVAG +YD+E
Sbjct: 439 FASVMTGFCLGAQLPLLCAIISELFGLKHYSTMYNVGSVSSPVGSYIFNVRVAGHLYDKE 498

Query: 201 GERQM---------SDDITKACKGVGCYRLSFLIIIGACVFGTLVSVVLVHRTRAFYKDD 260
             +QM           D+T  C G  CYRL+FLII  A +FG++VS++LV RTR FYK D
Sbjct: 499 ALKQMEALGLGRKPGQDLT--CSGAICYRLAFLIITAASLFGSIVSLILVFRTRTFYKGD 558

Query: 261 IYARFREREE 262
           IY +F+E  E
Sbjct: 559 IYKKFQEEVE 565

[Close]

BLAST of Lsi01G020760 vs. NCBI nr
Match: EOY07952.1 (Major facilitator superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 319.3 bits (817), Expect = 3.4e-83
Identity = 159/240 (66.25%), Postives = 192/240 (80.00%), Query Frame = 0


Query: 28  PPLGDDHTILQAILSVEMAILFMATTCGVGGALTVVDNVAQIGASLDYPARSISSFVSLM 87
           P  G+D+TILQAI S++M ILF+AT CG GGALTV+DN+ Q+G SL YP  SIS+F+SL+
Sbjct: 274 PDRGEDYTILQAIFSIDMLILFIATACGTGGALTVIDNLGQLGKSLGYPTHSISAFISLV 333

Query: 88  SIWNFLGRVMAGYVSEFLLIKYGLARPLMLTFVILMSCIGHILIAFGVPNSLYFASIITG 147
           SIWNFLGRV+AGY+SE +L KY   RPLMLTFVIL+SC+GH+LIAF VPNSLYFAS++TG
Sbjct: 334 SIWNFLGRVLAGYLSEIVLTKYNFPRPLMLTFVILLSCVGHLLIAFAVPNSLYFASVMTG 393

Query: 148 FCLGAQLPLTATIISDLFGLKHYSTLYNVGSVSSPVGSYIFNVRVAGRVYDREGERQM-- 207
           FCLGAQLPL   IIS+LFGLKHYST+YNVGSVSSPVGSYIFNVRVAG +YD+E  +Q   
Sbjct: 394 FCLGAQLPLLCAIISELFGLKHYSTMYNVGSVSSPVGSYIFNVRVAGHLYDKEAVKQTEA 453

Query: 208 -------SDDITKACKGVGCYRLSFLIIIGACVFGTLVSVVLVHRTRAFYKDDIYARFRE 259
                    D+   C G  CYRL+FLII  A +FG++VS++LV RTR FYK DIY +F+E
Sbjct: 454 LGRTRKPGQDLN--CSGAKCYRLAFLIITAATLFGSIVSLILVFRTRTFYKGDIYKKFKE 511

[Close]

BLAST of Lsi01G020760 vs. TAIR 10
Match: AT2G39210.1 (Major facilitator superfamily protein )

HSP 1 Score: 280.0 bits (715), Expect = 2.1e-75
Identity = 147/258 (56.98%), Postives = 184/258 (71.32%), Query Frame = 0


Query: 28  PPLGDDHTILQAILSVEMAILFMATTCGVGGALTVVDNVAQIGASLDYPARSISSFVSLM 87
           P  GDD+TILQA+ SV+M ILF+AT CGVGG LT +DN+ QIG SL YP RS+S+FVSL+
Sbjct: 328 PERGDDYTILQALFSVDMLILFLATICGVGGTLTAIDNLGQIGNSLGYPKRSVSTFVSLV 387

Query: 88  SIWNFLGRVMAGYVSEFLLIKYGLARPLMLTFVILMSCIGHILIAFGVPNSLYFASIITG 147
           SIWN+ GRV++G VSE  LIKY   RPLMLT V+L+SC GH+LIAF VP  LY AS+I G
Sbjct: 388 SIWNYYGRVVSGVVSEIFLIKYKFPRPLMLTMVLLLSCAGHLLIAFNVPGGLYVASVIIG 447

Query: 148 FCLGAQLPLTATIISDLFGLKHYSTLYNVGSVSSPVGSYIFNVRVAGRVYDREGERQMS- 207
           FC GAQ PL   IIS++FGLK+YSTLYN GSV+SP+GSY+ NVRVAG +YD E  +Q   
Sbjct: 448 FCFGAQWPLLFAIISEIFGLKYYSTLYNFGSVASPIGSYLLNVRVAGYLYDVEAGKQYKA 507

Query: 208 ------DDITKACKGVGCYRLSFLIIIGACVFGTLVSVVLVHRTRAFYKDDIYARFRERE 267
                 +     C G  C++LSF+II    +FG LVS+VLV RT+ FYK DIY +FRE+ 
Sbjct: 508 LGKTRVEGQDLNCIGTSCFKLSFIIIAAVTLFGVLVSMVLVIRTKKFYKSDIYKKFREKA 567

Query: 268 -----EITTPNTTTTTLS 274
                E+  P    +T++
Sbjct: 568 LAAEMEMAAPAAARSTVA 585

[Close]

BLAST of Lsi01G020760 vs. TAIR 10
Match: AT2G28120.1 (Major facilitator superfamily protein )

HSP 1 Score: 275.0 bits (702), Expect = 6.8e-74
Identity = 141/241 (58.51%), Postives = 177/241 (73.44%), Query Frame = 0


Query: 28  PPLGDDHTILQAILSVEMAILFMATTCGVGGALTVVDNVAQIGASLDYPARSISSFVSLM 87
           PP G+D+TILQA+LS +M ILF+AT CG+G +LT VDN+ QIG SL YP  ++SSFVSL+
Sbjct: 319 PPRGEDYTILQALLSTDMIILFVATFCGLGSSLTAVDNLGQIGESLGYPNHTVSSFVSLV 378

Query: 88  SIWNFLGRVMAGYVSEFLLIKYGLARPLMLTFVILMSCIGHILIAFGVPNSLYFASIITG 147
           SIWN+ GRV +G+VSE+LL KY L RPLM+T V+L+SC GH+LIAF VP S+Y ASI+ G
Sbjct: 379 SIWNYFGRVFSGFVSEYLLAKYKLPRPLMMTLVLLLSCAGHLLIAFPVPGSVYIASILMG 438

Query: 148 FCLGAQLPLTATIISDLFGLKHYSTLYNVGSVSSPVGSYIFNVRVAGRVYDREGERQMS- 207
           F  GAQLPL   IIS+LFGLK+YSTL+N G ++SP+GSYI NVRV G +YD+E  +Q++ 
Sbjct: 439 FSFGAQLPLLFAIISELFGLKYYSTLFNCGQLASPLGSYILNVRVTGMLYDKEALKQLTA 498

Query: 208 ------DDITKACKGVGCYRLSFLIIIGACVFGTLVSVVLVHRTRAFYKDDIYARFRERE 262
                 D     C G  CY+L FLI+     FG LVS+ L  RTR FYK DIY +FRE  
Sbjct: 499 RGLTRKDVKDLTCLGSQCYKLPFLILAAVTFFGALVSLGLAIRTREFYKGDIYKKFRESP 558

[Close]

BLAST of Lsi01G020760 vs. TAIR 10
Match: AT1G74780.1 (Nodulin-like / Major Facilitator Superfamily protein )

HSP 1 Score: 187.6 bits (475), Expect = 1.4e-47
Identity = 99/230 (43.04%), Postives = 142/230 (61.74%), Query Frame = 0


Query: 30  LGDDHTILQAILSVEMAILFMATTCGVGGALTVVDNVAQIGASLDYPARSISSFVSLMSI 89
           L ++  +LQA+  +   +LF+A  CG+G  L+ ++N+ QIG SL Y +  I+S VSL SI
Sbjct: 309 LSENLNLLQAMKKLSFWLLFLAMICGMGSGLSTINNIRQIGESLRYSSVEINSLVSLWSI 368

Query: 90  WNFLGRVMAGYVSEFLLIKYGLARPLMLTFVILMSCIGHILIAFGVPNSLYFASIITGFC 149
           WNFLGR  AGY S+ LL K G  RPL++   +    IGH++IA G   +LY  S+I G C
Sbjct: 369 WNFLGRFGAGYASDALLHKKGWPRPLLMAATLGTMSIGHLIIASGFQGNLYVGSVIVGVC 428

Query: 150 LGAQLPLTATIISDLFGLKHYSTLYNVGSVSSPVGSYIFNVRVAGRVYDREGERQMSDDI 209
            G+Q  L  TI S+LFG++H  T++N  SV+SP+GSYIF+VR+ G +YD+    +     
Sbjct: 429 YGSQWSLMPTITSELFGIRHMGTIFNTISVASPIGSYIFSVRLIGYIYDKTASGE----- 488

Query: 210 TKACKGVGCYRLSFLIIIGACVFGTLVSVVLVHRTRAFYKDDIYARFRER 260
              C G  C+RLSF+I+     FG LV++VL  RT+  Y+  +  R   R
Sbjct: 489 GNTCYGSHCFRLSFIIMASVAFFGFLVAIVLFFRTKTLYRQILVKRLHHR 533

[Close]

BLAST of Lsi01G020760 vs. TAIR 10
Match: AT2G16660.1 (Major facilitator superfamily protein )

HSP 1 Score: 179.1 bits (453), Expect = 5.1e-45
Identity = 93/222 (41.89%), Postives = 143/222 (64.41%), Query Frame = 0


Query: 27  RPPLGDDHTILQAILSVEMAILFMATTCGVGGALTVVDNVAQIGASLDYPARSISSFVSL 86
           +P LG+DHTI++A+L+V+  +LF++  CGVG  L V++N+ QIG +L Y   ++S FVS+
Sbjct: 312 KPVLGEDHTIMEAVLTVDFWVLFVSFLCGVGTGLAVMNNMGQIGLALGY--TNVSIFVSM 371

Query: 87  MSIWNFLGRVMAGYVSEFLLIKYGLARPLMLTFVILMSCIGHILIAFGVPNSLYFASIIT 146
            SIW F GR+++G +SE+ L K G  RPL      ++  +G+IL+A  VPNSLY  S++ 
Sbjct: 372 TSIWGFFGRILSGTLSEYFLKKAGTPRPLWNAASQILMAVGYILMALAVPNSLYIGSMVV 431

Query: 147 GFCLGAQLPLTATIISDLFGLKHYSTLYNVGSVSSPVGSYIFNVRVAGRVYDREGERQMS 206
           G C G +L +T    S+LFGLK+Y  +YN+  ++ P+GS++F+  +AG +YD E      
Sbjct: 432 GVCYGVRLAITVPTASELFGLKYYGLIYNILVLNLPLGSFLFSGLLAGFLYDAEATPTPG 491

Query: 207 DDITKACKGVGCYRLSFLIIIGACVFGTLVSVVLVHRTRAFY 249
              T  C G  CYRL F+++  A V G  + +VL +RT+  Y
Sbjct: 492 GGNT--CVGAHCYRLIFIVMALASVIGVGLDLVLAYRTKEIY 529

[Close]

BLAST of Lsi01G020760 vs. TAIR 10
Match: AT2G34355.1 (Major facilitator superfamily protein )

HSP 1 Score: 179.1 bits (453), Expect = 5.1e-45
Identity = 99/249 (39.76%), Postives = 148/249 (59.44%), Query Frame = 0


Query: 8   PSLQPTITMSHWYKNIF-TGRPPLGDDHTILQAILSVEMAILFMATTCGVGGALTVVDNV 67
           P L  +  +     NIF  G   + +D  IL+A+ +V   +LF+A  CG+G     V+N+
Sbjct: 277 PVLDTSALLDPPSSNIFPDGDHLVAEDSNILEAMSTVNFWLLFLAMLCGMGSGFATVNNM 336

Query: 68  AQIGASLDYPARSISSFVSLMSIWNFLGRVMAGYVSEFLLIKYGLARPLMLTFVILMSCI 127
            QIG SL Y +  ++S VSL SIWNFLGR  AGYVS+  L K+   RP+ +   + +  I
Sbjct: 337 RQIGESLRYSSVQLNSLVSLWSIWNFLGRFGAGYVSDTFLHKHSWPRPIFMAITLGVMAI 396

Query: 128 GHILIAFGVPNSLYFASIITGFCLGAQLPLTATIISDLFGLKHYSTLYNVGSVSSPVGSY 187
           GHI++A GV  SLY  S++ G   G+Q  L  TI S++FG++H  T+Y   S++ P+GSY
Sbjct: 397 GHIIVASGVQGSLYAGSVLIGMAYGSQWSLMPTITSEIFGIRHMGTIYFTISIAGPIGSY 456

Query: 188 IFNVRVAGRVYDREGERQMSDDITKACKGVGCYRLSFLIIIGACVFGTLVSVVLVHRTRA 247
           I +V+V G  YD+     ++ +   +C G  C+R SF+I+    +FG+LV+ VL  RT  
Sbjct: 457 ILSVKVIGYFYDK-----VASEDDNSCFGSQCFRTSFMIMASVALFGSLVASVLFFRTHK 516

Query: 248 FYKDDIYAR 256
           FYK+ +  R
Sbjct: 517 FYKNLVAKR 520

The following BLAST results are available for this feature:

BLAST of Lsi01G020760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6CGU8	3.6e-11	26.57	Probable transporter MCH1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=28...	[more]
Q96TW9	1.7e-05	24.39	Probable transporter MCH1 OS=Wickerhamomyces anomalus OX=4927 GN=MCH1 PE=3 SV=1	[more]

BLAST of Lsi01G020760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L178	1.3e-93	89.76	Nodulin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G50739...	[more]
A0A5D3C4Y9	7.4e-92	89.85	Protein NUCLEAR FUSION DEFECTIVE 4-like OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A6J1AS77	6.7e-85	65.99	protein NUCLEAR FUSION DEFECTIVE 4-like OS=Herrania umbratica OX=108875 GN=LOC11...	[more]
A0A6P6AMM9	8.7e-85	66.40	uncharacterized protein LOC111311019 OS=Durio zibethinus OX=66656 GN=LOC11131101...	[more]
A0A061EU62	1.6e-83	66.25	Major facilitator superfamily protein, putative OS=Theobroma cacao OX=3641 GN=TC...	[more]

BLAST of Lsi01G020760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146405.3	1.6e-117	82.80	protein NUCLEAR FUSION DEFECTIVE 4 [Cucumis sativus] >KAE8649721.1 hypothetical ...	[more]
TYK05449.1	1.5e-91	89.85	protein NUCLEAR FUSION DEFECTIVE 4-like [Cucumis melo var. makuwa]	[more]
XP_021289741.1	1.4e-84	65.99	protein NUCLEAR FUSION DEFECTIVE 4-like [Herrania umbratica]	[more]
XP_022766129.1	1.8e-84	66.40	uncharacterized protein LOC111311019 [Durio zibethinus]	[more]
EOY07952.1	3.4e-83	66.25	Major facilitator superfamily protein, putative [Theobroma cacao]	[more]

BLAST of Lsi01G020760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39210.1	2.1e-75	56.98	Major facilitator superfamily protein	[more]
AT2G28120.1	6.8e-74	58.51	Major facilitator superfamily protein	[more]
AT1G74780.1	1.4e-47	43.04	Nodulin-like / Major Facilitator Superfamily protein	[more]
AT2G16660.1	5.1e-45	41.89	Major facilitator superfamily protein	[more]
AT2G34355.1	5.1e-45	39.76	Major facilitator superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011701	Major facilitator superfamily	PFAM	PF07690	MFS_1	coord: 68..245 e-value: 7.1E-11 score: 41.6
IPR036259	MFS transporter superfamily	GENE3D	1.20.1250.20	MFS general substrate transporter like domains	coord: 39..249 e-value: 1.2E-9 score: 39.9
IPR036259	MFS transporter superfamily	SUPERFAMILY	103473	MFS general substrate transporter	coord: 35..249
None	No IPR available	PANTHER	PTHR21576	UNCHARACTERIZED NODULIN-LIKE PROTEIN	coord: 17..272
None	No IPR available	PANTHER	PTHR21576:SF80	FACILITATOR SUPERFAMILY PROTEIN, PUTATIVE-RELATED	coord: 17..272

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G020760.1	Lsi01G020760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0022857	transmembrane transporter activity