Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTGAATTAAAAAAAAAAATGCGGTCAGTGAAGAAGGAAAGGAAAAAGAGAGAAAAAACCCTAGCCTCCATTGATCTCTTCGCCGGCAAGCCTCAGACGGCGACGGCCCACACGAAGTCACGTTGACACGAGCGGAAAGCCAGGCGTTGAAGGTGTTACTCACGAACCCACCTTCTCTCCCTCACAGATATATCAGGTCTGCAATGTCTTTGTTTTGTGTGTGGAATTCGAATAAAATTAAGATGATAGGAAATTAGAAAATGATGTTGGCCTTCAATTTGGATGTAGTTGGATAAGTGAGCATTCTAATGGCAACAAATGATTCTGATGCTGAAACTGAAGAAAATTATTTGGAGACAAGAAACAACGATACTCCGCCAAATTCATCCTCAAAGTCAAAACGTGGAAGAGAAGAAGATGAAAAATGCAGTGCTGAGATAAAGGAGGAATCAAATAAATTTAAAAAAAAGGCTTTTCATTGGAATTGGGGTGACGAATGTACCATCTTGGAGAATTTGTATGAATTTGCAGGTAAAAAACTAACTATTGTGACTCTTTGATCTATCTGTTCTAATGTCCAAATGATTTATTTATTATATATTATGAATACACAGGCAAAAACGGGAGTTATTCAAAGGAGTTCTACCACTTTGTGAAGGGGAAGTTGAGTAGTGAGGTATCGAATTCTCAATTGTCAGATAAAGTGTATAGGTTGAGGAAGAAATTCTTGAAGTATAAATGTAAGATGGAATTAGATGGAAAAATGAGTAAATTTTCAGATAGTAATAAGGAGAAGTTGTTTGAGTTATGGAGCAACATTTGGGGCGACCAAAACCCTAAAACTACTGGACCCCCATATTCTTCAATAATTCAATGGAAGCCTGAAGAAGTTGATCGGTTCTATGAGAAAAGGTTTAAAATTTTTGTTGAAAGTATCAAGCTTGACATCACCTGCATTCCACCTGATGTTTTGCAACACATTAGAAAAGAATGGGAAGATGTGAGGAGTGCTAGGAATGATTATGAGTTCAAGAATGCCAAGTTACTTGTGGAAATCTCTGATATAAGATGTAGTCAGAATAAGTGCTAGCTAATCAACACTTTAATCTCTTTTTCTGATCTTTTCTACTTTCTCAACATTAATTTGTTATCACTTCCCCCCTACTCTATTCTTTATGTTATCCTATCTAAGGGGGATAATTAGCCCCATATTATTATTGATCATTATATTGCTTCAATTTAAGTCACATCTCTCACTACCTAA
mRNA sequence
TCTGAATTAAAAAAAAAAATGCGGTCAGTGAAGAAGGAAAGGAAAAAGAGAGAAAAAACCCTAGCCTCCATTGATCTCTTCGCCGGCAAGCCTCAGACGGCGACGGCCCACACGAAGTCACGTTGACACGAGCGGAAAGCCAGGCGTTGAAGGTGTTACTCACGAACCCACCTTCTCTCCCTCACAGATATATCAGTTGGATAAGTGAGCATTCTAATGGCAACAAATGATTCTGATGCTGAAACTGAAGAAAATTATTTGGAGACAAGAAACAACGATACTCCGCCAAATTCATCCTCAAAGTCAAAACGTGGAAGAGAAGAAGATGAAAAATGCAGTGCTGAGATAAAGGAGGAATCAAATAAATTTAAAAAAAAGGCTTTTCATTGGAATTGGGGTGACGAATGTACCATCTTGGAGAATTTGTATGAATTTGCAGGCAAAAACGGGAGTTATTCAAAGGAGTTCTACCACTTTGTGAAGGGGAAGTTGAGTAGTGAGGTATCGAATTCTCAATTGTCAGATAAAGTGTATAGGTTGAGGAAGAAATTCTTGAAGTATAAATGTAAGATGGAATTAGATGGAAAAATGAGTAAATTTTCAGATAGTAATAAGGAGAAGTTGTTTGAGTTATGGAGCAACATTTGGGGCGACCAAAACCCTAAAACTACTGGACCCCCATATTCTTCAATAATTCAATGGAAGCCTGAAGAAGTTGATCGGTTCTATGAGAAAAGGTTTAAAATTTTTGTTGAAAGTATCAAGCTTGACATCACCTGCATTCCACCTGATGTTTTGCAACACATTAGAAAAGAATGGGAAGATGTGAGGAGTGCTAGGAATGATTATGAGTTCAAGAATGCCAAGTTACTTGTGGAAATCTCTGATATAAGATGTAGTCAGAATAAGTGCTAGCTAATCAACACTTTAATCTCTTTTTCTGATCTTTTCTACTTTCTCAACATTAATTTGTTATCACTTCCCCCCTACTCTATTCTTTATGTTATCCTATCTAAGGGGGATAATTAGCCCCATATTATTATTGATCATTATATTGCTTCAATTTAAGTCACATCTCTCACTACCTAA
Coding sequence (CDS)
ATGGCAACAAATGATTCTGATGCTGAAACTGAAGAAAATTATTTGGAGACAAGAAACAACGATACTCCGCCAAATTCATCCTCAAAGTCAAAACGTGGAAGAGAAGAAGATGAAAAATGCAGTGCTGAGATAAAGGAGGAATCAAATAAATTTAAAAAAAAGGCTTTTCATTGGAATTGGGGTGACGAATGTACCATCTTGGAGAATTTGTATGAATTTGCAGGCAAAAACGGGAGTTATTCAAAGGAGTTCTACCACTTTGTGAAGGGGAAGTTGAGTAGTGAGGTATCGAATTCTCAATTGTCAGATAAAGTGTATAGGTTGAGGAAGAAATTCTTGAAGTATAAATGTAAGATGGAATTAGATGGAAAAATGAGTAAATTTTCAGATAGTAATAAGGAGAAGTTGTTTGAGTTATGGAGCAACATTTGGGGCGACCAAAACCCTAAAACTACTGGACCCCCATATTCTTCAATAATTCAATGGAAGCCTGAAGAAGTTGATCGGTTCTATGAGAAAAGGTTTAAAATTTTTGTTGAAAGTATCAAGCTTGACATCACCTGCATTCCACCTGATGTTTTGCAACACATTAGAAAAGAATGGGAAGATGTGAGGAGTGCTAGGAATGATTATGAGTTCAAGAATGCCAAGTTACTTGTGGAAATCTCTGATATAAGATGTAGTCAGAATAAGTGCTAG
Protein sequence
MATNDSDAETEENYLETRNNDTPPNSSSKSKRGREEDEKCSAEIKEESNKFKKKAFHWNWGDECTILENLYEFAGKNGSYSKEFYHFVKGKLSSEVSNSQLSDKVYRLRKKFLKYKCKMELDGKMSKFSDSNKEKLFELWSNIWGDQNPKTTGPPYSSIIQWKPEEVDRFYEKRFKIFVESIKLDITCIPPDVLQHIRKEWEDVRSARNDYEFKNAKLLVEISDIRCSQNKC
Homology
BLAST of Lsi01G020280 vs. ExPASy Swiss-Prot
Match:
O23063 (Probable transcription factor At4g00390 OS=Arabidopsis thaliana OX=3702 GN=At4g00390 PE=1 SV=1)
HSP 1 Score: 48.1 bits (113), Expect = 1.5e-04
Identity = 57/207 (27.54%), Postives = 92/207 (44.44%), Query Frame = 0
Query: 2 ATNDSDAETE-ENYLETRNNDTPPNSSSKSKRGREEDEKCSA------------------ 61
A DSD+ +E E ++ + D P + S K+ +++D+ S+
Sbjct: 75 AAADSDSGSESETDSDSESTDPPKSGSGKTIASKKKDDPSSSTATLALPAVKSGAKRAAS 134
Query: 62 --------EIKEESNKFKKKAFH---WNWGDECTILENLYEFAGKNG----SYSKEFYHF 121
+K++ KK A W+ DE ++L+ + ++ G + + FY F
Sbjct: 135 EAATTSTKRVKKDEESVKKPALFQRLWSDDDEISMLQGMIDYHADTGKSPSADTNAFYEF 194
Query: 122 VKGKLSSEVSNSQLSDKVYRLRKKFLKYKCKMELDGKMSKFSDSNKEKLFELWSNIWG-- 169
K +S EVS SQ SDKV LRKK+ + K E +F ++ +K FEL IWG
Sbjct: 195 QKKSISFEVSKSQFSDKVRSLRKKYRAKEGKDE-----PRFVKAHDKKAFELSKFIWGPK 254
BLAST of Lsi01G020280 vs. ExPASy Swiss-Prot
Match:
Q94IK2 (STOREKEEPER protein OS=Solanum tuberosum OX=4113 GN=STK PE=2 SV=1)
HSP 1 Score: 46.2 bits (108), Expect = 5.8e-04
Identity = 47/161 (29.19%), Postives = 73/161 (45.34%), Query Frame = 0
Query: 4 NDSDAETEENYLETRNND--TPPNSSSKSKRGREEDEKCSAEIKEESNKFKKKAFH---- 63
+DS+AE+ + +D PN ++K+ + K E ++E K K K
Sbjct: 91 SDSEAESGNSLPSPSASDFTVKPNVAAKAATPSKPAAKRPQEAQKEKGKKKPKIAEEEEK 150
Query: 64 ---------WNWGDECTILENLYEFAGKNG----SYSKEFYHFVKGKLSSEVSNSQLSDK 123
W+ D+ +L+ + E+ G + F+ F++GKL +EVS SQ+SDK
Sbjct: 151 KSPATPRSLWSDDDQLALLKGILEYKTVKGMEPSADMSAFHEFIRGKLQAEVSKSQISDK 210
Query: 124 VYRLRKKFLKYKCKMELDGKMSKFSDSNKEKLFELWSNIWG 146
V RL+KKFL DG+ F +FE IWG
Sbjct: 211 VRRLKKKFL----TNVKDGEEPVFKKGQDFLIFEHSKRIWG 247
BLAST of Lsi01G020280 vs. ExPASy TrEMBL
Match:
A0A6J1DXL5 (probable transcription factor At4g01260 OS=Momordica charantia OX=3673 GN=LOC111025442 PE=3 SV=1)
HSP 1 Score: 226.9 bits (577), Expect = 8.9e-56
Identity = 125/236 (52.97%), Postives = 166/236 (70.34%), Query Frame = 0
Query: 1 MATNDSDAETEENYLETRNNDTPPNSSSKS----KRGREED-EKCSA-EIKEESNKFKKK 60
MATN + E +++ ++ + S+ KRGRE+D EKCS+ KEES K KK
Sbjct: 1 MATNRYEIEGDDSGTNSKTGSETEDEGSRKMSSLKRGREKDEEKCSSPNSKEESKKSKKM 60
Query: 61 AFHWNWGDECTILENLYEFAGKNGSYSKEFYHFVKGKLSSEVSNSQLSDKVYRLRKKFLK 120
FHW+W DEC IL+N YEFAGKNGSYSK+FYHFVK KLS +VSNSQLSDKVYRLRK+FLK
Sbjct: 61 GFHWSWSDECVILKNFYEFAGKNGSYSKDFYHFVKNKLSVDVSNSQLSDKVYRLRKRFLK 120
Query: 121 YKCKMELDGKMSKFSDSNKEKLFELWSNIWGDQNPKTTGPPYSSIIQWKPEEVDRFYEKR 180
+CK ++ K SK + EKL+E+ +NIWG + T S QWK E V+R E+
Sbjct: 121 DECKGKIRMKFSK--GNQLEKLYEMSNNIWGSNS--NTQNTQSGGNQWKAEAVNRLCEEM 180
Query: 181 FKIFVESIKLDITCIPPDVLQHIRKEWEDVRSARNDYEFKNAKLLVEISDIRCSQN 231
F+ +E++K+DI+CIPP+VL IRK+WE ++ A+++YE KNA LL++IS IRC+QN
Sbjct: 181 FERVIENVKVDISCIPPNVLXDIRKDWEQMKMAQDEYELKNANLLLQISHIRCTQN 232
BLAST of Lsi01G020280 vs. ExPASy TrEMBL
Match:
A0A0A0L833 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G498910 PE=3 SV=1)
HSP 1 Score: 149.8 bits (377), Expect = 1.4e-32
Identity = 104/227 (45.81%), Postives = 130/227 (57.27%), Query Frame = 0
Query: 1 MATNDSDAETEENYLETRNNDTPPNSSSKSKRGREEDEKCSAEIKEESNKFKKKAFHWNW 60
MAT+ SDAETE+NYLE++ +SS+ SK GR+EDE + E++++
Sbjct: 1 MATSFSDAETEDNYLESKFESPQISSSNNSKCGRQEDESWNPEMEDQE------------ 60
Query: 61 GDECTILENLYEFAGKNGSYSKEFYHFVKGKLSSEVSNSQLSDKVYRLRKKFLKYKCKME 120
++GKLS EVSNSQLSDKVYRL+K+F+ K
Sbjct: 61 ---------------------------LEGKLSVEVSNSQLSDKVYRLKKRFILMKANKS 120
Query: 121 LD-GKMSKFSDSNKEKLFELWSNIWGD-QNPKTTGPPYSSIIQWKPEEVDRFY--EKRFK 180
D KM FSDSN +KLFEL SNIWGD +NPK + P FY EK F+
Sbjct: 121 CDNNKMRTFSDSNYKKLFELSSNIWGDEENPKLSEDP----------SARGFYNDEKVFQ 178
Query: 181 IFVESIKLDITCIPPDVLQHIRKEWEDVRSARNDYEFKNAKLLVEIS 224
+ +E +K+DIT IPP LQ+IRKEWEDV SARN YE K AKLL EIS
Sbjct: 181 MALEKLKVDITFIPPHDLQNIRKEWEDVMSARNGYELKYAKLLEEIS 178
BLAST of Lsi01G020280 vs. ExPASy TrEMBL
Match:
A0A6J1GK86 (probable transcription factor At1g66420 OS=Cucurbita moschata OX=3662 GN=LOC111454655 PE=3 SV=1)
HSP 1 Score: 104.4 bits (259), Expect = 6.6e-19
Identity = 67/207 (32.37%), Postives = 111/207 (53.62%), Query Frame = 0
Query: 25 NSSSKSKRGREEDEKCSAEIKEESN----KFKKKAFHWNWGDECTILENLYEFAGKNGSY 84
NS S+ K E E+ + K +N + K++ W DE +L+ LY+F G N SY
Sbjct: 18 NSDSEYKIEEESSEESEEQSKSNNNSSKKRIKRRVLEWEEEDEIIVLQQLYQFGGSNASY 77
Query: 85 SKEFYHFVKGKL-SSEVSNSQLSDKVYRLRKKFLKYKCKMELDGKMSKFSDSNKEKLFEL 144
SK FY FVK +L +++VS QLS+K+ R +K++LK +C+ + + KFS+ ++ ++F L
Sbjct: 78 SKAFYEFVKKRLNNNQVSMHQLSNKIDRFKKEYLKNECRKKEND--LKFSEYHEFEVFML 137
Query: 145 WSNIWGDQNPKTTGPPYSSIIQWKPEEVDRFYEKRFKIFVESIKLDITCIPPDVLQHIRK 204
IWG + K+ G Y K F ++E + +DI C+ P L+H +K
Sbjct: 138 SRRIWGGKRSKSNGGRMK-------------YAKGFLEYLEEMDIDIDCLTPSCLEHFKK 197
Query: 205 EWE-------DVRSARNDYEFKNAKLL 220
EWE ++ S ++ ++ K +LL
Sbjct: 198 EWEVQLLMYIELLSKKSKFDAKLMELL 209
BLAST of Lsi01G020280 vs. ExPASy TrEMBL
Match:
A0A6J1I882 (probable transcription factor At1g61730 OS=Cucurbita maxima OX=3661 GN=LOC111471848 PE=3 SV=1)
HSP 1 Score: 104.0 bits (258), Expect = 8.7e-19
Identity = 65/183 (35.52%), Postives = 98/183 (53.55%), Query Frame = 0
Query: 25 NSSSKSKRGREEDEKCSAEIKEESNKFKK----KAFHWNWGDECTILENLYEFAGKNGSY 84
NS SK K E E+ + K ++ KK + W DE +L+ LYEF G N SY
Sbjct: 18 NSDSKYKIEEESSEESEEQSKSNNHSIKKRIKRRVLEWQEEDEIIVLQQLYEFGGSNASY 77
Query: 85 SKEFYHFVKGKLS-SEVSNSQLSDKVYRLRKKFLKYKCKMELDGKMSKFSDSNKEKLFEL 144
SK FY FVK +LS ++VS Q S+K+ R +K++LK +C+ + + KFS+ ++ ++F L
Sbjct: 78 SKAFYEFVKKRLSNNQVSMHQTSNKIDRFKKEYLKNECRKKEND--LKFSEYHEFEVFML 137
Query: 145 WSNIWGDQNPKTTGPPYSSIIQWKPEEVDRFYEKRFKIFVESIKLDITCIPPDVLQHIRK 203
IWG + K+ G Y K F ++E + +DI C+ P L+H +K
Sbjct: 138 SKRIWGARRSKSNGGGMK-------------YAKGFLEYLEEMDIDIDCLTPSCLEHFKK 185
BLAST of Lsi01G020280 vs. ExPASy TrEMBL
Match:
A0A6J1E125 (probable transcription factor At4g00610 OS=Momordica charantia OX=3673 GN=LOC111025438 PE=3 SV=1)
HSP 1 Score: 82.0 bits (201), Expect = 3.5e-12
Identity = 61/199 (30.65%), Postives = 103/199 (51.76%), Query Frame = 0
Query: 16 ETRNNDTPPNSSSKSKRGREEDEKCSAEIKEESN-KFKKK----AFHWNWGDECTILENL 75
+ R++DT S+S+ E++++ + + K KKK +F W DE +L+ L
Sbjct: 11 DERSSDTEYRVESESESDSEDEQRRRRRRRRHTKPKTKKKKAALSFKWREEDEVFVLKQL 70
Query: 76 YEFAGKNGSYSKEFYHFVKGKLSSEVSNSQLSDKVYRLRKKFLKYKCKMELDGK--MSKF 135
YEF+GKN +YS+EFY FVK KL +VS Q+ +K+ LR+K+L+ E +G
Sbjct: 71 YEFSGKNATYSEEFYEFVKKKLGGQVSMHQMRNKIRGLRRKYLE---NDECNGLKFCGSG 130
Query: 136 SDSNKEKLFELWSNIWG-----DQNPKTTGPPYSSIIQWKPEEVDRFYEKRFKIFVESIK 195
S ++ K+ IWG ++N G S+ Q YE+ F +E ++
Sbjct: 131 SQQHQRKVLAWSKRIWGAAENENENKNKNGGGTRSVEQ---------YERGFVESLEEME 190
Query: 196 LDITCIPPDVLQHIRKEWE 203
+++ C+ P L+ + K+WE
Sbjct: 191 IEMDCLKPSCLEFLYKDWE 197
BLAST of Lsi01G020280 vs. NCBI nr
Match:
XP_038877618.1 (STOREKEEPER protein-like [Benincasa hispida])
HSP 1 Score: 241.5 bits (615), Expect = 7.2e-60
Identity = 130/197 (65.99%), Postives = 149/197 (75.63%), Query Frame = 0
Query: 44 IKEESNKFKKKAFHWNWGDECTILENLYEFAGKNGSYSKEFYHFVKGKLSSEVSNSQLSD 103
++EE +K F W+ DECTILEN YEFAGKNG+YSK FYHFVKGKLS EVSNSQLS
Sbjct: 1 MEEEKESKEKMPFRWSSTDECTILENFYEFAGKNGNYSKAFYHFVKGKLSGEVSNSQLST 60
Query: 104 KVYRLRKKFLKYKCKMELDGKM-SKFSDSNKEKLFELWSNIWGD--QNPKTT----GPPY 163
KVYRLRK+F+K K + M KF D EK+FEL NIWGD +NPK+T GP
Sbjct: 61 KVYRLRKRFMKNKRNDNNNNNMREKFPD---EKVFELSRNIWGDDQENPKSTIGGGGPSS 120
Query: 164 SS---IIQWKPEEVDRFYEKRFKIFVESIKLDITCIPPDVLQHIRKEWEDVRSARNDYEF 223
SS IIQWKPEEV+RFYEKRFKIF+E++KLD+T IP VL+ +RKEWEDVR ARNDYE
Sbjct: 121 SSSINIIQWKPEEVERFYEKRFKIFLENMKLDVTSIPTHVLEDVRKEWEDVRRARNDYEL 180
Query: 224 KNAKLLVEISDIRCSQN 231
KNA LL EISDIRC+QN
Sbjct: 181 KNADLLEEISDIRCTQN 194
BLAST of Lsi01G020280 vs. NCBI nr
Match:
XP_022158998.1 (probable transcription factor At4g01260 [Momordica charantia])
HSP 1 Score: 226.9 bits (577), Expect = 1.8e-55
Identity = 125/236 (52.97%), Postives = 166/236 (70.34%), Query Frame = 0
Query: 1 MATNDSDAETEENYLETRNNDTPPNSSSKS----KRGREED-EKCSA-EIKEESNKFKKK 60
MATN + E +++ ++ + S+ KRGRE+D EKCS+ KEES K KK
Sbjct: 1 MATNRYEIEGDDSGTNSKTGSETEDEGSRKMSSLKRGREKDEEKCSSPNSKEESKKSKKM 60
Query: 61 AFHWNWGDECTILENLYEFAGKNGSYSKEFYHFVKGKLSSEVSNSQLSDKVYRLRKKFLK 120
FHW+W DEC IL+N YEFAGKNGSYSK+FYHFVK KLS +VSNSQLSDKVYRLRK+FLK
Sbjct: 61 GFHWSWSDECVILKNFYEFAGKNGSYSKDFYHFVKNKLSVDVSNSQLSDKVYRLRKRFLK 120
Query: 121 YKCKMELDGKMSKFSDSNKEKLFELWSNIWGDQNPKTTGPPYSSIIQWKPEEVDRFYEKR 180
+CK ++ K SK + EKL+E+ +NIWG + T S QWK E V+R E+
Sbjct: 121 DECKGKIRMKFSK--GNQLEKLYEMSNNIWGSNS--NTQNTQSGGNQWKAEAVNRLCEEM 180
Query: 181 FKIFVESIKLDITCIPPDVLQHIRKEWEDVRSARNDYEFKNAKLLVEISDIRCSQN 231
F+ +E++K+DI+CIPP+VL IRK+WE ++ A+++YE KNA LL++IS IRC+QN
Sbjct: 181 FERVIENVKVDISCIPPNVLXDIRKDWEQMKMAQDEYELKNANLLLQISHIRCTQN 232
BLAST of Lsi01G020280 vs. NCBI nr
Match:
XP_023521141.1 (probable transcription factor At1g61730 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 106.7 bits (265), Expect = 2.8e-19
Identity = 66/207 (31.88%), Postives = 113/207 (54.59%), Query Frame = 0
Query: 25 NSSSKSKRGREEDEKCSAEIKEESN----KFKKKAFHWNWGDECTILENLYEFAGKNGSY 84
NS S+ K E E+ + K +N + K++ W DE +L+ LY+F G N SY
Sbjct: 18 NSDSEYKIEEESSEESEEQSKRNNNSSKKRIKRRVLEWEEEDEIIVLQQLYQFGGSNASY 77
Query: 85 SKEFYHFVKGKL-SSEVSNSQLSDKVYRLRKKFLKYKCKMELDGKMSKFSDSNKEKLFEL 144
SK FY FVK +L +++VS +Q+S+K+ R +K++LK +C+ +++ KFS+ ++ ++F L
Sbjct: 78 SKAFYEFVKKRLNNNQVSMNQMSNKIDRFKKEYLKNECRKKVND--LKFSEYHEFEVFML 137
Query: 145 WSNIWGDQNPKTTGPPYSSIIQWKPEEVDRFYEKRFKIFVESIKLDITCIPPDVLQHIRK 204
IWG + K+ G Y K F ++E + +DI C+ P L+H +K
Sbjct: 138 SRRIWGGKRSKSNGGRMK-------------YAKGFSEYLEEMDIDIDCLTPSCLEHFKK 197
Query: 205 EWE-------DVRSARNDYEFKNAKLL 220
EWE ++ S ++ ++ K +LL
Sbjct: 198 EWEVQLLMYIELLSKKSKFDAKLMELL 209
BLAST of Lsi01G020280 vs. NCBI nr
Match:
XP_022951915.1 (probable transcription factor At1g66420 [Cucurbita moschata])
HSP 1 Score: 104.4 bits (259), Expect = 1.4e-18
Identity = 67/207 (32.37%), Postives = 111/207 (53.62%), Query Frame = 0
Query: 25 NSSSKSKRGREEDEKCSAEIKEESN----KFKKKAFHWNWGDECTILENLYEFAGKNGSY 84
NS S+ K E E+ + K +N + K++ W DE +L+ LY+F G N SY
Sbjct: 18 NSDSEYKIEEESSEESEEQSKSNNNSSKKRIKRRVLEWEEEDEIIVLQQLYQFGGSNASY 77
Query: 85 SKEFYHFVKGKL-SSEVSNSQLSDKVYRLRKKFLKYKCKMELDGKMSKFSDSNKEKLFEL 144
SK FY FVK +L +++VS QLS+K+ R +K++LK +C+ + + KFS+ ++ ++F L
Sbjct: 78 SKAFYEFVKKRLNNNQVSMHQLSNKIDRFKKEYLKNECRKKEND--LKFSEYHEFEVFML 137
Query: 145 WSNIWGDQNPKTTGPPYSSIIQWKPEEVDRFYEKRFKIFVESIKLDITCIPPDVLQHIRK 204
IWG + K+ G Y K F ++E + +DI C+ P L+H +K
Sbjct: 138 SRRIWGGKRSKSNGGRMK-------------YAKGFLEYLEEMDIDIDCLTPSCLEHFKK 197
Query: 205 EWE-------DVRSARNDYEFKNAKLL 220
EWE ++ S ++ ++ K +LL
Sbjct: 198 EWEVQLLMYIELLSKKSKFDAKLMELL 209
BLAST of Lsi01G020280 vs. NCBI nr
Match:
KAG6585873.1 (putative transcription factor, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 104.0 bits (258), Expect = 1.8e-18
Identity = 68/207 (32.85%), Postives = 110/207 (53.14%), Query Frame = 0
Query: 25 NSSSKSKRGREEDEKCSAEIKEESNKFKK----KAFHWNWGDECTILENLYEFAGKNGSY 84
NS S+ K E E+ + K +N KK + W DE +L+ LY+F G N SY
Sbjct: 18 NSDSEYKIEEESSEESEEQSKSNNNSSKKRIKGRVLEWEEEDEIIVLQQLYQFGGSNASY 77
Query: 85 SKEFYHFVKGKL-SSEVSNSQLSDKVYRLRKKFLKYKCKMELDGKMSKFSDSNKEKLFEL 144
SK FY FVK +L +++VS QLS+K+ R +K++LK +C+ + + KFS+ ++ ++F L
Sbjct: 78 SKAFYEFVKKRLNNNQVSMHQLSNKIDRFKKEYLKNECRKKEND--LKFSEYHEFEVFML 137
Query: 145 WSNIWGDQNPKTTGPPYSSIIQWKPEEVDRFYEKRFKIFVESIKLDITCIPPDVLQHIRK 204
IWG + K+ G Y K F ++E + +DI C+ P L+H +K
Sbjct: 138 SRRIWGGKRSKSNGGRMK-------------YAKGFLEYLEEMDIDIDCLTPSCLEHFKK 197
Query: 205 EWE-------DVRSARNDYEFKNAKLL 220
EWE ++ S ++ ++ K +LL
Sbjct: 198 EWEVQLLMYIELLSKKSKFDAKLMELL 209
BLAST of Lsi01G020280 vs. TAIR 10
Match:
AT4G00390.1 (DNA-binding storekeeper protein-related transcriptional regulator )
HSP 1 Score: 48.1 bits (113), Expect = 1.1e-05
Identity = 57/207 (27.54%), Postives = 92/207 (44.44%), Query Frame = 0
Query: 2 ATNDSDAETE-ENYLETRNNDTPPNSSSKSKRGREEDEKCSA------------------ 61
A DSD+ +E E ++ + D P + S K+ +++D+ S+
Sbjct: 75 AAADSDSGSESETDSDSESTDPPKSGSGKTIASKKKDDPSSSTATLALPAVKSGAKRAAS 134
Query: 62 --------EIKEESNKFKKKAFH---WNWGDECTILENLYEFAGKNG----SYSKEFYHF 121
+K++ KK A W+ DE ++L+ + ++ G + + FY F
Sbjct: 135 EAATTSTKRVKKDEESVKKPALFQRLWSDDDEISMLQGMIDYHADTGKSPSADTNAFYEF 194
Query: 122 VKGKLSSEVSNSQLSDKVYRLRKKFLKYKCKMELDGKMSKFSDSNKEKLFELWSNIWG-- 169
K +S EVS SQ SDKV LRKK+ + K E +F ++ +K FEL IWG
Sbjct: 195 QKKSISFEVSKSQFSDKVRSLRKKYRAKEGKDE-----PRFVKAHDKKAFELSKFIWGPK 254
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
O23063 | 1.5e-04 | 27.54 | Probable transcription factor At4g00390 OS=Arabidopsis thaliana OX=3702 GN=At4g0... | [more] |
Q94IK2 | 5.8e-04 | 29.19 | STOREKEEPER protein OS=Solanum tuberosum OX=4113 GN=STK PE=2 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1DXL5 | 8.9e-56 | 52.97 | probable transcription factor At4g01260 OS=Momordica charantia OX=3673 GN=LOC111... | [more] |
A0A0A0L833 | 1.4e-32 | 45.81 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G498910 PE=3 SV=1 | [more] |
A0A6J1GK86 | 6.6e-19 | 32.37 | probable transcription factor At1g66420 OS=Cucurbita moschata OX=3662 GN=LOC1114... | [more] |
A0A6J1I882 | 8.7e-19 | 35.52 | probable transcription factor At1g61730 OS=Cucurbita maxima OX=3661 GN=LOC111471... | [more] |
A0A6J1E125 | 3.5e-12 | 30.65 | probable transcription factor At4g00610 OS=Momordica charantia OX=3673 GN=LOC111... | [more] |
Match Name | E-value | Identity | Description | |
XP_038877618.1 | 7.2e-60 | 65.99 | STOREKEEPER protein-like [Benincasa hispida] | [more] |
XP_022158998.1 | 1.8e-55 | 52.97 | probable transcription factor At4g01260 [Momordica charantia] | [more] |
XP_023521141.1 | 2.8e-19 | 31.88 | probable transcription factor At1g61730 [Cucurbita pepo subsp. pepo] | [more] |
XP_022951915.1 | 1.4e-18 | 32.37 | probable transcription factor At1g66420 [Cucurbita moschata] | [more] |
KAG6585873.1 | 1.8e-18 | 32.85 | putative transcription factor, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
Match Name | E-value | Identity | Description | |
AT4G00390.1 | 1.1e-05 | 27.54 | DNA-binding storekeeper protein-related transcriptional regulator | [more] |