Lsi01G020270 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G020270
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Golgi SNAP receptor complex member 1
Location	chr01: 27753816 .. 27763461 (-)
RNA-Seq Expression	Lsi01G020270
Synteny	Lsi01G020270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATTTTCATTTTTATCAATATATTTTTGTAAAATTTGAAAATTCAATTCAATCAACATTATTTATTTATTTATTAATTTAATTTGAAACAGTAGAATTTTGGGGGGTTTGTATGAAAAGGGTAATTAAGCATTTGTGATAGTGATAACTAAAGCAAAATGGGTTTTGGAGGGTGAATTTTGTGGATGGCAATGACGGATCAGAGCCTTGAGTTGCAGGAGTCCGGTTGGGAGGAGCTGAGGCGTGAGGCTCGAAAGATCGAGGGCGATCTCGATGTCAAGCTCTCCTCTTATGCAAAGCTCGGTACCAGGTTCACTCAAGGAGGTTTGTTCATTTCACTATCCTCTCATTCCTTACCCCTTTTATGCTTTACAATCTCTATATGCAAATTCCTACTTGGAATTCACTGAATTCACTGAATTTCATATATGTCTTATGCCCCCATTGCTTCAAAACCATATTCATCATTTGTGTTATTCATTCCATACTGCTAATTAAAGTTAAGTCAATTGTCTTGTGTTCTTAATTTGTTTAATGTCCCCAAAACATTACATCCACCTTGCAGCTTATAAATTGCTCCAGAACATATATATATATATATATATATATATATATATATATTTTAAGTTAATAAACGAATATCCACAACCCTAATCTTTCTATGCACCTCTTAAACACCACTAAATGGGAAAGAATATTTTGCCTCAATCTAAAGCAATGCTAATGATTTGAATCTTTCTACTTCTAGTCCTAATTTCTGCACTACTTTGTTTGAGCTGACTAAATGTAAACCCTATATATACATATATATATTATTTGAGTAGCTATACTGGGTTCTGTAGTAGTCTTTGTTCTTAGATGAGGTTATATGGTTGATAGTTTATGTGCTTGTGATCAGGTTATGTGGATTCTGGTTCACCATCTGTTGGTTCCAACAGATCATGGAAGTCTATGGAAATGGAAATCGAATCTTTACTTGAGAAATTGTTGGACGTTAATGATTCAATGAGTCGATGTGCTGCATCTGCGGCATCAGCTACCTCCATAAATCAAAAACTAGCAAGACACAGGGATATCCTCCATGAATTTACACAGGTTTTGACTTTCTTTTTCTGTTTTTATATCTTTTTTTTTTTTTAATTATTGTTTTTATGATTAAGATCCTAATGAGCTCATTTAAATAAATTAAAAAAAAGAAAAAGAAAAAAGGAGCCTAACAAGTATTAATGATTTGTAGTTCCAAATTCTTTGGGCTATTTATTTTGAAGTTTATAAAATGCTATTTGGAGAAATGCATATTTACTGGGAGGAAAGGGTTGAGTTAGCAAGAAAATATGTGACTTCTTGGAGTACATTGTATTTGATTTTACTTGTGAAGCTTTCGAAACACTTCTCCTTTTCCTCTTTGACACAATCCCAATTTTCTTAAACGATTTATCTTATTACTATCCCATCTAAAAACTCCCTTTTTAACCTCTCTTAAGGTTTCACCGTTTGTTATCATGTTTCTGCCAAGGCCCTTCCCCTTTCATCGTTTATATCTCCCCATGTTTGCTATATTAGAGATTCTTTACCACTACCAGGCTTTGATCAATTAACTACATGATTGAGATCAAGATGCTATCTTAGATCATTTAAAATTTTAGCCAGTTAGGGGTCGGCAACATGTAAAACATCCTGCTGATTTCCATTGTAAGGATGTTTAGTTTTAGCCTTTAGGTTGGTGACCAAATTTTCCTTAAGCTCCAACCATACATACTTGGGTTGAGTTATTATTATTATTATTATTATTATTATTATTATTATTATTATAATTAATTCTTTAATTATATTTTAATGATATGATTGGACTGAGAAATTGTCTCCTCGGTTTTATTGTTCCTCTCCTACGGAAGCAAGAGATGCCCTTTATGTAATTTCTCTTTAAAATTGAAAACAACAACAAAACAACCCCTCATGGCCTTGCATCTGTAAACCAGAAGGTGAAAATCTAATTAAACTTTATTCATTTCCCATTTCATTTTCATCAAAAGAAACTAAAGTGAAACAGAATGAAAGAAGAAAGTTCCCCAAAATGCTCCACGACAGAAATAAAAAACACAGAAAATGGAAAAAAGCTGAAAAAAAGACAAGAAGTCGAGATCAAGACCAAAAAAAAGAAAAGATCAAAAGCGCCATTCAGAAGAAATGTCCAATTGGACATGAAAGAGAAGGATACCCACTACAAAAATCATCATCAAAACGTTATAGAGAAAGAGGAATTAAAAGAAAACACAACCACAATGGGTCAATGGGAATTTATTGTTACGGCCATTGTGCTTTGCAGTATTGTGTTTGGTGATTAGTGCTGCATAAAGCACTTTACTGTTACGATTTGAAGTTTATGATGATAAGTCTTAGTTTGTAGTTAGTTAAATCACTAATGAACCCAAAAACTTTAGCTAATAGGTTATGGTAAATTGAATCTCTTATCTATACGTTGACACTCCCTGGGCTTGAAAATTTGCACAAGACCCTACAAGGGAATCAATATTATTAGGAGAGGAAATGACTTTACAGAGGTTCAAACACAGAACCTCGTGCTCTATTACCTACTAGAATTTTTAAGAAGTAAAATTGTTATCTTTCTTCAATATAATTTGAATCAAGTACATGTCTTCTATGATAGGAGAAAAACCACCTGCAGATAAGGAAAAATACTACAAATTTAAATACTAGATAAATCCAACAAATGTGTTAGAAGGTAGAAGGAGGAGAAGATGGAGAGGTGTTGAGTAGGGTAGTAGACACTAGACAGCTTGTCTGGTGAAAGATCAGACCCTCGCTACAAGTCTGGAAATTGTATCTCTCATTGTCTTTTTAAAAATCTTTTTGCGACATTCTTTCTTTGCTATTGGTTGACTTTTCTGTGAATATACCTGTCACAGATACCAGAACTGTGGAAAAATTGCTAAGCTGAATTTGGTTTTCTAAGAACGAACAAGATAGAGGTTGTGAGGTTTGGGGATGTATGAGAGTTGTGATGTTCCCGTTTCTTTATTATGGTTAATTGGAGTATTTTTTTTCTTTATAACATTTATTCGGTGATGCAAGTTTGAGATGGTCTAGTTCTCCCTTCCCCCTCTATTTCGATTAGTTGGAGATGATGAGAGTGCTAAGGAGGTGTCAACATAGTTGAGATGTTCTGGTGCACTCGTTAATTCCTTGTTCTTTTTGCTCTTGTATCTCTCTATGTAACTTGAGCATTAGTCTCATTTCATTATTTCAATGAACAGATTCGTTTCCCTTTTTTCAAAAAAATTTCAAAGGACATTCACGCCTTTTGTCTTAAAAATAAATCCTTCTTCAATGATTTAAAGTTGTGAAATGGGTAGTTCATGTGGAATAATATTGTAAAATATGTTTGCTCAATAAACGTTTTCAGTGTCACAAATGTGCCTCCAGTCCTTGTTTAGTTGAGAAGGATCTGAGTATAAAGGTTTCACATTCCAATGACATTTGATAGGATTGGTCATTGTAGTAGTGGTTTTGGAATATTATTAGGGTGCTAAGGGGATATTAGTAATTAAATAAGGAGTTTGTTAGGGAGAGTTGTTATATATAGAGTGAGGGAAAAAGGTTTGAAGGCAAGCATTGATTTAGTTGGCTTTCGGCTTGAGTGAGAGTACCCAAGAGAGGGAGGGTCCAAGTACCTTGGATTCTTGGGCTTATCTTGTACTTCTTTTATCTTTTGTATTTCAACATATTTGGGGTTCTAACATGATGTTATCACCTATGTAGTAGACCCCCTACCCAGTTGGCTGTCACACGATGCTTGTGCTAATGCCATCCTTCATCATGCCTATATCCGTCCGTTGTTTACCACACATTTGTTTGTCCTCCATCTCCACTACTATTGCTGATTATAGTTAATTAATTGAAAGTCACTCACCCCATCAAATGGATCCAGTTGCACTTTGTAGTACCAAATGTTTGAAAGGTTAAAAGTCAAATTTCTTGAGGGTGTTAGATGTGACCTTGGGGATTGGGTTATGTTAATTTGTTTATTGAATAAAAGTAGAAGAGAGAAAGAAAGAAAGAAAGAAAAGTGAACAGGAAAAAGAAAAAGAAAGAAAGAAAGAAATAGAAGTGAAGAGGACAAAAAAGAGAGAGATTACATATTCCATCTACTTTTTTAAAAATCTCTTGCAAGGAAACCTATTGTTTAACTAGACAAGGTGTGTTTCAAGGCAGGTAGGTAACGATAGAAGTGTTGTCAGAGTAATTAGGAATATTTTTAAAGTATTAAGTGTTATTGGAGTACTTAGAAATATTTAAGGTGTCAAGGGTATATTGGTCATCAACCAAGGAATTGGTTATAATTGGAGGGAGAATGAGGGAGTGAAGATAGGCAATTGTTTAATTGATTTTCACTCAAGAAGGGGGTTCTATGTACCTATCTATGTATCTATGCTAAGAAGCACAGACACTTTAGTTTGGCTAGCATGTCCGTGTCCGATACGTGTCGGACACTCCGACACTTCGACACTTGTTGGACACGTATCGGACACTTGTTAGTGCAACAAATATGTTAGACATGCATTGAACACTTGTTGAGTAGACTAAAAAGAAACATATATAACAATAATAATAACTTTTGAGTGTAAAATACATCAAGGGCTAGTCTTTTAAGCATATAAATGTATCAACTCATTTACTTTCAATTTTATTTTGGTATGTAAATGATATATATTTTTAAAAATGTATATTTAAATAAACGTGTCCTTGCCGTGTCGTGTCTTAGATATTTAAAATATGGCATGTCGCTGTGTCCGTGTCGTGTCGTATCCGTATCCGTGCTTCTTAATATCTATGTATCTATCTATATGTGTATATATATAAGAAAGAAAGCTGAAATATATTAGTGCAGAAAGATCATAAAAAAGGCAAGATGAGATGTCCCCTCAAGCCAGGGTTATGCAATGGATCTTCAATTGGCAAAAACTAGTTCACAATCTAGTTACAAGAAAGTCCAGAATGAGAAGAGAAGTTGGATGTGTGTTTCATAGAAATTCCGCAGGGATGCGATGCCATTACCGTGCTAGGCTAGAGGATTTTAGCCGATCTATGAAAAGGAACAGCATTAAGCTGGATCAAGGGCCTCATTGTCTTCTCTGGAGAAGCTCCAGCTAATCCCAAAAGCGCTGGGGTTCTTGGGCCTAATAACATTTGCTTAAGTACAGTGGAGAAGAAGGTAATGATGATCCTTTGAAGTTCTGTTACACAAAATGCACCAGCTTGGAGAATGGGAAAGATTGGGACACCTCCTTTGCAGCAAGTCATAAGTATTCAACTTCACTTGAACAAACACAAGAAAACCCTTCACCTCCTGAGGAATACTGGCCTTCTTAAATGATTTTGATTATTGCATCTTCGAACGGGGCATGCATGTGTAAGGCCCCAATTAAGCATATTTATGAGAAGAGTGGTAAAAAAAGATGGATGAAAAGGATTTCATAGAAGAGCTATTGGATGAGTTACATCGGTCTATGATTTACTCAAAGCTTGACCTTCGATCTGGATATCTGTTAGGTTCCTTTTATCCTGCACTCAGTAAACCCAACAAGGAAACAGATAGAATGGAGCAACAGAACTCTGTGATATGCACTATTGAAGAAAAAAATGATTACAATGTATTTACAAGGCCTCCAAGGACAGCAAACACCAAATAGCAGTGATAAAGATAACCTAAATGGAAATAACAAGAAATGAGAATGAAAATAGCAAAACCAGCACGTTGAAGAGAGTTGGTGGTCCTTTCCTTCCTAAAAGTGATGTAAGAAGAATAGGGGTTAATTGGGTAATTAAGTAATATTCTAGATTAATTCCCTTTTTACCCCACTTGTAATAAAGCTCTATAAATAGAAATCTTCCCCTTTTGTATCAAACACATTATTCATTCTAATAAAAGATTCACAAGCTTGATTCTTGGAAAGATCCAGAATTAATTTCTTCTTACATCAATTTAGGCTACATCAATTACCAAATTGATGCAGCCTAAAGAGATAAAATGAGAAATCTCTCCAAGAATCAAGATTGTGGATCTTTTATTAGAATGAATAATGTGTTTGATACAAGAGAGAAGATTCCTATTTATAGAGCTTTATTACAAGTGGGGTAAAAAGGGAATTAATCTAGAATATTACTTAATTATCCAATTAATCCCTATTCTTCTTACATCAAAAAGCCACTCTGAGCCTTTACCAAAATAAGTCTGCCTCCCTGATTCCCATGCTTCCCTATTTGTAGTAATATTCCTGGTACCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCAACGGGGATTACATTTTTACCTTTTACCATTGAGCTAAAGGTACCTTCCCTTCCCCCCCCCCCCCCCCCCCCCCCAAGGTCATTCTTCCTCAATAACGTCCTTGGCAGCCGTTGTCTTCTGTGAAGTTCCTCTTCTCCGTTTGTAAGTATATAATATTGGGGTTTAGCAATATCACTCGATAAGGATGGATGAAAAGAATATCTACAAGACAACATTTTTTACCCACGAGGGACATTACGAGTTCAAGGTTATGCCGTTTGGACTAACGAATGCCCCAGCCATCTTCCAGTCATTGATAAATCAAATCTTCAGACCCTACTTGAAGGTTTAGCTTGGTGTTATTTGATGATATATTGGTGTACTTAGATACTCACGAAAAACATCTAGGATTCTTTTCAATATCCTTACAGATAATGAGTTATACGCTAATAGGAAGAAATGTTTTTTTTAATAATGGTTCTTCTGTACCATATTCTAATTTCTGATTGACACTTGAAATTGCGTACGTCATTTGCTTTAATGATTTATGCATCCACCTTGCTACTTCCTTGATAGAAATGCTTTACTCAACAACATTGAAGTAATAAAGAATGAAAGATATCTATGTACTTCAGGAATTCAAACGAATCAAAGGAAACATTAATTCAATGAGGGAACATGCAGAACTTTTGAGTTCTGTTAGGGATGACATCAACGAGTATAAGGTTAGCATGACCACGCCTGTTGACATTGTTACATGGAATATGTTTATATTCAATGCATGTTAAAAAGTAACTCCCACCCAATTTGTTTCGTACAGTCACCTGGAACCATGTCTCCAAGGGTGCAATTACTGCGGGAAAGAGCTGCTATTCATGGAAGTATTGCTCATGTAAGCGTCAATAAAATTTATTGCTGATCTAGTCTCTTTCTTCAATTCCCTTGCCAAGTGTAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGAAGTAAAATGTTATATTTAGGATTTGATATGTTGTTTAGCATTATGATATTATATTAAATAGCCATTTTAATCATGGATTTCGATGTTTTGCCGCACTTCATGTTTTTCTTTTCCTTTTTAATTTATCTTCTGTAGATGGACGAAGTAATAAGTCAAGCCCAAACTACAAGGGCAGTCTTAGGTAACCAAAGGGCCTTATTCGGAGATGTTCAAGGAAAAGTGAAGCTTCTAAGTGACAAATTCCCAGTAATACGCGGCCTTCTAGGTAATTTATAAACATTGGATAAACTGTGCCTCTATTATTTCTGCTCCGTTTGGGCTAATAGTAGTTAGTTTCTGATGTCATAATCAGGTTCAATTAGAAGAAGGCGGTCAAGGGACACACTTATTCTGTCTGGAGTCGTTGCAGCATGTACCTTGTTTCTTATTATCTATTGGCTTTCAAAATGACAAGGTGCAAATTTGAAAATTTGGGGGTTTTGCTTTTGTAACTTTCTTTAAGTAAGCAACATCGAGATTGAAGATTTCTAGTGTTTCTTGCGTCATTAAATTCGGGTGTCTTTTTCTTACCTTCAATAATACCACCATTTTGCCATTTCGATTGGAGGTAAAACTTTGAAGCCTACATGCTAGCATCTTATCCTGGGAATCCTCACAGGATTTGTACTTGTACAGTAATAACAAAGCAAATAGAAAGATTGCCTTCCTATTGATGGAATCTTACTCTCCTCCTGGGAAAGATGGAAGCAGTGCTCAACATTGATAGACTCCTTTATTCTTGTCTGGCTTGCCCAGTACTAAAATACAGCCGACAAATATTAGTGATTACTCAAAAGGTAGAACTGACTGAATTGGGAAAGGCTGAAGTAGCCACTTGGATTTTCAAACCCAGCCTATGAAGAATCAATACTCCTTCCATTACTTGACTGAGGTTAGACGGAAAACTATGATGCGGCCTTTTTGTTTTTACCCATGTGATAGGAATCGATATTGAGAAGTATTATTCAAGAGAAAACGATTGGCCTAGGGCAAGTTACAATATCCAGCCTCACTCGGAAGCAAGGATCCAATCCTCGCCCTCTCGATTACTATTGGATGATGAAGCCACACTCCCCATTACATAAGCCATTCTCTCTTTACCCTTCCTATGATATTGTAATAGAATTGGTGGCCAAACACCATGCTCCTAGAGAAGAGGTAGAAACAAGGGTTCAACTTCGGATGGTTATACTCCAAGAATTTGAGTCATTATGATAGTAGGGGACAGTGTTGTGTCCACATAACATAGCACGACCCTAAAGTGACGACCATGATTATGCTCGTCTTGTTACCAAACACCATGGTTTTGCACTAAGATGGATGGAGTAAATGGACTAGAGGTTAGTTGATGACTTGGGAAAAGGGCAAGTGCAACAATGGAGAGTGAAATGCCTCATGTGTATAGTCTTTTTAAGGCAGCATCAAAATGAAGTTATGACACACAACCGAAGTGACACTCTCGCTCAACCGGATGTAGCTCGTTTGAGTGCGTGGAATATGGCTTGTCGCTTAGGGCGAACTATTGGGACCTTGGATATGTGGGAGGAAAGAGTGATTGATAATGAGCACAACCTAAGCTAAGCTGGTCAACAAAAGGTCCACGGACTTAAGTTGAGCAAGACATTGGCAGATGTGAAGTGAGATATATGTCTCGAATATATGGCACCATTCGTTTTGTTGACTCTTTTTTGTTGAGACGAGATATGTTAACATCTATTCGCAATTGGCAACCATATTTTTTTTT

mRNA sequence

AAAATTTTCATTTTTATCAATATATTTTTGTAAAATTTGAAAATTCAATTCAATCAACATTATTTATTTATTTATTAATTTAATTTGAAACAGTAGAATTTTGGGGGGTTTGTATGAAAAGGGTAATTAAGCATTTGTGATAGTGATAACTAAAGCAAAATGGGTTTTGGAGGGTGAATTTTGTGGATGGCAATGACGGATCAGAGCCTTGAGTTGCAGGAGTCCGGTTGGGAGGAGCTGAGGCGTGAGGCTCGAAAGATCGAGGGCGATCTCGATGTCAAGCTCTCCTCTTATGCAAAGCTCGGTACCAGGTTCACTCAAGGAGGTTATGTGGATTCTGGTTCACCATCTGTTGGTTCCAACAGATCATGGAAGTCTATGGAAATGGAAATCGAATCTTTACTTGAGAAATTGTTGGACGTTAATGATTCAATGAGTCGATGTGCTGCATCTGCGGCATCAGCTACCTCCATAAATCAAAAACTAGCAAGACACAGGGATATCCTCCATGAATTTACACAGGAATTCAAACGAATCAAAGGAAACATTAATTCAATGAGGGAACATGCAGAACTTTTGAGTTCTGTTAGGGATGACATCAACGAGTATAAGTCACCTGGAACCATGTCTCCAAGGGTGCAATTACTGCGGGAAAGAGCTGCTATTCATGGAAGTATTGCTCATATGGACGAAGTAATAAGTCAAGCCCAAACTACAAGGGCAGTCTTAGGTAACCAAAGGGCCTTATTCGGAGATGTTCAAGGAAAAGTGAAGCTTCTAAGTGACAAATTCCCAGTAATACGCGGCCTTCTAGGTTCAATTAGAAGAAGGCGGTCAAGGGACACACTTATTCTGTCTGGAGTCGTTGCAGCATGTACCTTGTTTCTTATTATCTATTGGCTTTCAAAATGACAAGGTGCAAATTTGAAAATTTGGGGGTTTTGCTTTTGTAACTTTCTTTAAGTAAGCAACATCGAGATTGAAGATTTCTAGTGTTTCTTGCGTCATTAAATTCGGGTGTCTTTTTCTTACCTTCAATAATACCACCATTTTGCCATTTCGATTGGAGGTAAAACTTTGAAGCCTACATGCTAGCATCTTATCCTGGGAATCCTCACAGGATTTGTACTTGTACAGTAATAACAAAGCAAATAGAAAGATTGCCTTCCTATTGATGGAATCTTACTCTCCTCCTGGGAAAGATGGAAGCAGTGCTCAACATTGATAGACTCCTTTATTCTTGTCTGGCTTGCCCAGTACTAAAATACAGCCGACAAATATTAGTGATTACTCAAAAGGTAGAACTGACTGAATTGGGAAAGGCTGAAGTAGCCACTTGGATTTTCAAACCCAGCCTATGAAGAATCAATACTCCTTCCATTACTTGACTGAGGTTAGACGGAAAACTATGATGCGGCCTTTTTGTTTTTACCCATGTGATAGGAATCGATATTGAGAAGTATTATTCAAGAGAAAACGATTGGCCTAGGGCAAGTTACAATATCCAGCCTCACTCGGAAGCAAGGATCCAATCCTCGCCCTCTCGATTACTATTGGATGATGAAGCCACACTCCCCATTACATAAGCCATTCTCTCTTTACCCTTCCTATGATATTGTAATAGAATTGGTGGCCAAACACCATGCTCCTAGAGAAGAGGTAGAAACAAGGGTTCAACTTCGGATGGTTATACTCCAAGAATTTGAGTCATTATGATAGTAGGGGACAGTGTTGTGTCCACATAACATAGCACGACCCTAAAGTGACGACCATGATTATGCTCGTCTTGTTACCAAACACCATGGTTTTGCACTAAGATGGATGGAGTAAATGGACTAGAGGTTAGTTGATGACTTGGGAAAAGGGCAAGTGCAACAATGGAGAGTGAAATGCCTCATGTGTATAGTCTTTTTAAGGCAGCATCAAAATGAAGTTATGACACACAACCGAAGTGACACTCTCGCTCAACCGGATGTAGCTCGTTTGAGTGCGTGGAATATGGCTTGTCGCTTAGGGCGAACTATTGGGACCTTGGATATGTGGGAGGAAAGAGTGATTGATAATGAGCACAACCTAAGCTAAGCTGGTCAACAAAAGGTCCACGGACTTAAGTTGAGCAAGACATTGGCAGATGTGAAGTGAGATATATGTCTCGAATATATGGCACCATTCGTTTTGTTGACTCTTTTTTGTTGAGACGAGATATGTTAACATCTATTCGCAATTGGCAACCATATTTTTTTTT

Coding sequence (CDS)

ATGGCAATGACGGATCAGAGCCTTGAGTTGCAGGAGTCCGGTTGGGAGGAGCTGAGGCGTGAGGCTCGAAAGATCGAGGGCGATCTCGATGTCAAGCTCTCCTCTTATGCAAAGCTCGGTACCAGGTTCACTCAAGGAGGTTATGTGGATTCTGGTTCACCATCTGTTGGTTCCAACAGATCATGGAAGTCTATGGAAATGGAAATCGAATCTTTACTTGAGAAATTGTTGGACGTTAATGATTCAATGAGTCGATGTGCTGCATCTGCGGCATCAGCTACCTCCATAAATCAAAAACTAGCAAGACACAGGGATATCCTCCATGAATTTACACAGGAATTCAAACGAATCAAAGGAAACATTAATTCAATGAGGGAACATGCAGAACTTTTGAGTTCTGTTAGGGATGACATCAACGAGTATAAGTCACCTGGAACCATGTCTCCAAGGGTGCAATTACTGCGGGAAAGAGCTGCTATTCATGGAAGTATTGCTCATATGGACGAAGTAATAAGTCAAGCCCAAACTACAAGGGCAGTCTTAGGTAACCAAAGGGCCTTATTCGGAGATGTTCAAGGAAAAGTGAAGCTTCTAAGTGACAAATTCCCAGTAATACGCGGCCTTCTAGGTTCAATTAGAAGAAGGCGGTCAAGGGACACACTTATTCTGTCTGGAGTCGTTGCAGCATGTACCTTGTTTCTTATTATCTATTGGCTTTCAAAATGA

Protein sequence

MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSGSPSVGSNRSWKSMEMEIESLLEKLLDVNDSMSRCAASAASATSINQKLARHRDILHEFTQEFKRIKGNINSMREHAELLSSVRDDINEYKSPGTMSPRVQLLRERAAIHGSIAHMDEVISQAQTTRAVLGNQRALFGDVQGKVKLLSDKFPVIRGLLGSIRRRRSRDTLILSGVVAACTLFLIIYWLSK

Homology

[Close]

BLAST of Lsi01G020270 vs. ExPASy Swiss-Prot
Match: O22151 (Golgi SNAP receptor complex member 1-2 OS=Arabidopsis thaliana OX=3702 GN=GOS12 PE=1 SV=2)

HSP 1 Score: 391.7 bits (1005), Expect = 5.9e-108
Identity = 202/257 (78.60%), Postives = 225/257 (87.55%), Query Frame = 0


Query: 3   MTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQG---------------- 62
           MT+ SL+LQESGWEELRREARKIEGDLDVKLSSYAKLG RFTQG                
Sbjct: 1   MTESSLDLQESGWEELRREARKIEGDLDVKLSSYAKLGARFTQGDTDLVMNYEKVLKCVL 60

Query: 63  --GYVDSGSPSVGSNRSWKSMEMEIESLLEKLLDVNDSMSRCAASAASATSINQKLARHR 122
             GYVD+GSP+VGS RSWKSMEMEI+SLLEKLLD+NDSMSRCAASAA  TS+ QKLARHR
Sbjct: 61  VSGYVDTGSPTVGSGRSWKSMEMEIQSLLEKLLDINDSMSRCAASAAPTTSVTQKLARHR 120

Query: 123 DILHEFTQEFKRIKGNINSMREHAELLSSVRDDINEYKSPGTMSPRVQLLRERAAIHGSI 182
           DILHE+TQEF+RIKGNINS+REHAELLSSVRDDI+EYK+ G+MSP VQ+LRERA+IHGSI
Sbjct: 121 DILHEYTQEFRRIKGNINSLREHAELLSSVRDDISEYKASGSMSPGVQVLRERASIHGSI 180

Query: 183 AHMDEVISQAQTTRAVLGNQRALFGDVQGKVKLLSDKFPVIRGLLGSIRRRRSRDTLILS 242
           +H+D+VI QAQ TRAVLG+QR+LF DVQGKVK L DKFPVIRGLLGSI+R+RSRDTLILS
Sbjct: 181 SHIDDVIGQAQATRAVLGSQRSLFSDVQGKVKNLGDKFPVIRGLLGSIKRKRSRDTLILS 240

[Close]

BLAST of Lsi01G020270 vs. ExPASy Swiss-Prot
Match: O88630 (Golgi SNAP receptor complex member 1 OS=Mus musculus OX=10090 GN=Gosr1 PE=1 SV=2)

HSP 1 Score: 149.4 bits (376), Expect = 5.1e-35
Identity = 87/239 (36.40%), Postives = 137/239 (57.32%), Query Frame = 0


Query: 15  WEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSGSPSVGS-----------NRSWK 74
           WE+LR++AR++E +LD+KL S++KL T ++  G  D G     S           +R ++
Sbjct: 9   WEDLRKQARQLENELDLKLVSFSKLCTSYSHSGSRDGGRDRYSSDTTPLLNGSSQDRMFE 68

Query: 75  SMEMEIESLLEKLLDVNDSMSRCAASAASAT---SINQKLARHRDILHEFTQEFKRIKGN 134
           +M +EIE LL +L  VND M+    SA   +   ++   L RHRDIL ++T EF + K N
Sbjct: 69  TMAIEIEQLLARLTGVNDKMAEYTHSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKAN 128

Query: 135 INSMREHAELLSSVRDDINEYKS-PGTMSPRVQL-LRERAAIHGSIAHMDEVISQAQTTR 194
             ++RE   L+ SVR DI  YKS  G  + R +L L+E   +  S   ++E IS A  T+
Sbjct: 129 FTAIRERENLMGSVRKDIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMATK 188

Query: 195 AVLGNQRALFGDVQGKVKLLSDKFPVIRGLLGSIRRRRSRDTLILSGVVAACTLFLIIY 238
             + +QR +   +  K+  L+++FP +  L+  I  R+ RD+LIL GV+  CT+ L++Y
Sbjct: 189 ENMTSQRGMLKSIHSKMNTLANRFPAVNSLIQRINLRKRRDSLILGGVIGICTILLLLY 247

[Close]

BLAST of Lsi01G020270 vs. ExPASy Swiss-Prot
Match: O08522 (Golgi SNAP receptor complex member 1 OS=Cricetulus griseus OX=10029 GN=GOSR1 PE=1 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 4.3e-34
Identity = 86/239 (35.98%), Postives = 136/239 (56.90%), Query Frame = 0


Query: 15  WEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSGSPSVGS-----------NRSWK 74
           WE+LR++AR++E +LD+KL S++KL T ++     D G     S           +R ++
Sbjct: 9   WEDLRKQARQLENELDLKLVSFSKLCTSYSHSSARDGGRDRYSSDTTPLLNGSSQDRMFE 68

Query: 75  SMEMEIESLLEKLLDVNDSMSRCAASAASAT---SINQKLARHRDILHEFTQEFKRIKGN 134
           +M +EIE LL +L  VND M+    SA   +   ++   L RHRDIL ++T EF + K N
Sbjct: 69  TMAIEIEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKAN 128

Query: 135 INSMREHAELLSSVRDDINEYKS-PGTMSPRVQL-LRERAAIHGSIAHMDEVISQAQTTR 194
             ++RE   L+ SVR DI  YKS  G  + R +L L+E   +  S   ++E IS A  T+
Sbjct: 129 FMAIRERENLMGSVRKDIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMATK 188

Query: 195 AVLGNQRALFGDVQGKVKLLSDKFPVIRGLLGSIRRRRSRDTLILSGVVAACTLFLIIY 238
             + +QR +   +  K+  L+++FP +  L+  I  R+ RD+LIL GV+  CT+ L++Y
Sbjct: 189 ENMTSQRGMLKSIHSKMNTLANRFPAVNSLIQRINLRKRRDSLILGGVIGICTILLLLY 247

[Close]

BLAST of Lsi01G020270 vs. ExPASy Swiss-Prot
Match: Q5RBL6 (Golgi SNAP receptor complex member 1 OS=Pongo abelii OX=9601 GN=GOSR1 PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 4.3e-34
Identity = 88/237 (37.13%), Postives = 138/237 (58.23%), Query Frame = 0


Query: 15  WEELRREARKIEGDLDVKLSSYAKLGTRF----TQGGYVDSGSPS-----VGSNRSWKSM 74
           WE+LR++AR++E +LD+KL S++KL T +    T+ G  DS   +        +R +++M
Sbjct: 9   WEDLRKQARQLENELDLKLVSFSKLCTSYSHSSTRDGRRDSSDTTPLLNGSSQDRMFETM 68

Query: 75  EMEIESLLEKLLDVNDSMSRCAASAASAT---SINQKLARHRDILHEFTQEFKRIKGNIN 134
            +EIE LL +L  VND M+    SA   +   ++   L RHRDIL ++T EF + K N  
Sbjct: 69  AIEIEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFM 128

Query: 135 SMREHAELLSSVRDDINEYKS-PGTMSPRVQL-LRERAAIHGSIAHMDEVISQAQTTRAV 194
           S+RE   L+ SVR DI  YKS  G  + R +L L+E   +  S   ++E IS A  T+  
Sbjct: 129 SIRERENLMGSVRKDIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMATKEN 188

Query: 195 LGNQRALFGDVQGKVKLLSDKFPVIRGLLGSIRRRRSRDTLILSGVVAACTLFLIIY 238
           + +QR +   +  K+  L+++FP +  L+  I  R+ RD+LIL GV+  CT+ L++Y
Sbjct: 189 MTSQRGMLKSIHSKMNTLANRFPAVNSLIQRINLRKRRDSLILGGVIGICTILLLLY 245

[Close]

BLAST of Lsi01G020270 vs. ExPASy Swiss-Prot
Match: Q62931 (Golgi SNAP receptor complex member 1 OS=Rattus norvegicus OX=10116 GN=Gosr1 PE=1 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 4.3e-34
Identity = 86/239 (35.98%), Postives = 136/239 (56.90%), Query Frame = 0


Query: 15  WEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSGSPSVGS-----------NRSWK 74
           WE+LR++AR++E +LD+KL S++KL T ++     D G     S           +R ++
Sbjct: 9   WEDLRKQARQLENELDLKLVSFSKLCTSYSHSSARDGGRDRYSSDTTPLLNGSSQDRMFE 68

Query: 75  SMEMEIESLLEKLLDVNDSMSRCAASAASAT---SINQKLARHRDILHEFTQEFKRIKGN 134
           +M +EIE LL +L  VND M+    SA   +   ++   L RHRDIL ++T EF + K N
Sbjct: 69  TMAIEIEQLLARLTGVNDKMAEYTHSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKAN 128

Query: 135 INSMREHAELLSSVRDDINEYKS-PGTMSPRVQL-LRERAAIHGSIAHMDEVISQAQTTR 194
             ++RE   L+ SVR DI  YKS  G  + R +L L+E   +  S   ++E IS A  T+
Sbjct: 129 FMAIRERENLMGSVRKDIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMATK 188

Query: 195 AVLGNQRALFGDVQGKVKLLSDKFPVIRGLLGSIRRRRSRDTLILSGVVAACTLFLIIY 238
             + +QR +   +  K+  L+++FP +  L+  I  R+ RD+LIL GV+  CT+ L++Y
Sbjct: 189 ENMTSQRGMLKSIHSKMNTLANRFPAVNSLIQRINLRKRRDSLILGGVIGICTILLLLY 247

[Close]

BLAST of Lsi01G020270 vs. ExPASy TrEMBL
Match: A0A0A0L102 (Golgi SNAP receptor complex member 1 OS=Cucumis sativus OX=3659 GN=Csa_4G438030 PE=3 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 7.2e-125
Identity = 235/241 (97.51%), Postives = 239/241 (99.17%), Query Frame = 0


Query: 1   MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSGSPSVGSNR 60
           MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSGSPSVGSNR
Sbjct: 1   MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSGSPSVGSNR 60

Query: 61  SWKSMEMEIESLLEKLLDVNDSMSRCAASAASATSINQKLARHRDILHEFTQEFKRIKGN 120
           SWKSMEMEI+SLLEKLLDVNDSMSRCAASA  ATSINQKLARHRDILHEFTQEFKRIKGN
Sbjct: 61  SWKSMEMEIQSLLEKLLDVNDSMSRCAASATPATSINQKLARHRDILHEFTQEFKRIKGN 120

Query: 121 INSMREHAELLSSVRDDINEYKSPGTMSPRVQLLRERAAIHGSIAHMDEVISQAQTTRAV 180
           INSMREHAELLSSVRDDINEYKSPGTMSPRVQLLRERAAIHGSIAHMDEVISQAQTTRAV
Sbjct: 121 INSMREHAELLSSVRDDINEYKSPGTMSPRVQLLRERAAIHGSIAHMDEVISQAQTTRAV 180

Query: 181 LGNQRALFGDVQGKVKLLSDKFPVIRGLLGSIRRRRSRDTLILSGVVAACTLFLIIYWLS 240
           LGNQRALFGDVQGKVK+LSDKFPVIRGLLGSIRRRRSRDT+ILSGV+AACTLFLIIYWLS
Sbjct: 181 LGNQRALFGDVQGKVKVLSDKFPVIRGLLGSIRRRRSRDTIILSGVIAACTLFLIIYWLS 240

Query: 241 K 242
           K
Sbjct: 241 K 241

[Close]

BLAST of Lsi01G020270 vs. ExPASy TrEMBL
Match: A0A1S3BN37 (Golgi SNAP receptor complex member 1 OS=Cucumis melo OX=3656 GN=LOC103491367 PE=3 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 7.9e-124
Identity = 234/241 (97.10%), Postives = 237/241 (98.34%), Query Frame = 0


Query: 1   MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSGSPSVGSNR 60
           MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSGS SVGSNR
Sbjct: 1   MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSGSSSVGSNR 60

Query: 61  SWKSMEMEIESLLEKLLDVNDSMSRCAASAASATSINQKLARHRDILHEFTQEFKRIKGN 120
           SWKSMEMEI+SLLEKLLDVNDSMSRCAASA  ATSINQKLARHRDILHEFTQEFKRIKGN
Sbjct: 61  SWKSMEMEIQSLLEKLLDVNDSMSRCAASATPATSINQKLARHRDILHEFTQEFKRIKGN 120

Query: 121 INSMREHAELLSSVRDDINEYKSPGTMSPRVQLLRERAAIHGSIAHMDEVISQAQTTRAV 180
           INSMREHAELLSSVRDDINEYKSPGTMSPRVQLLRERAAIHGSIAHMDEVISQAQTTRAV
Sbjct: 121 INSMREHAELLSSVRDDINEYKSPGTMSPRVQLLRERAAIHGSIAHMDEVISQAQTTRAV 180

Query: 181 LGNQRALFGDVQGKVKLLSDKFPVIRGLLGSIRRRRSRDTLILSGVVAACTLFLIIYWLS 240
           LGNQR LFGDVQGKVKLLSDKFPVIRGLLGSIRRRRSRDT+ILSGV+AACTLFLIIYWLS
Sbjct: 181 LGNQRVLFGDVQGKVKLLSDKFPVIRGLLGSIRRRRSRDTIILSGVIAACTLFLIIYWLS 240

Query: 241 K 242
           K
Sbjct: 241 K 241

[Close]

BLAST of Lsi01G020270 vs. ExPASy TrEMBL
Match: A0A6J1HNF7 (Golgi SNAP receptor complex member 1 OS=Cucurbita maxima OX=3661 GN=LOC111466232 PE=3 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 1.3e-123
Identity = 234/241 (97.10%), Postives = 237/241 (98.34%), Query Frame = 0


Query: 1   MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSGSPSVGSNR 60
           MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDS SPSVG NR
Sbjct: 1   MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSSSPSVGPNR 60

Query: 61  SWKSMEMEIESLLEKLLDVNDSMSRCAASAASATSINQKLARHRDILHEFTQEFKRIKGN 120
           SWKSMEMEI+SLLEKLLDVNDSMSRCAA AA ATSINQKLARHRDILHEFTQEFKRIKGN
Sbjct: 61  SWKSMEMEIQSLLEKLLDVNDSMSRCAAFAAPATSINQKLARHRDILHEFTQEFKRIKGN 120

Query: 121 INSMREHAELLSSVRDDINEYKSPGTMSPRVQLLRERAAIHGSIAHMDEVISQAQTTRAV 180
           INSMREHAELLSSVRDDINEYKSPGTMSPR+QLLRERAAIHGSIAHMDEVISQAQTTRAV
Sbjct: 121 INSMREHAELLSSVRDDINEYKSPGTMSPRMQLLRERAAIHGSIAHMDEVISQAQTTRAV 180

Query: 181 LGNQRALFGDVQGKVKLLSDKFPVIRGLLGSIRRRRSRDTLILSGVVAACTLFLIIYWLS 240
           LGNQRALFGDVQGKVKLLSDKFPVIRGLLGSIRRRRSRDTLILSGV+AACTLFLIIYWLS
Sbjct: 181 LGNQRALFGDVQGKVKLLSDKFPVIRGLLGSIRRRRSRDTLILSGVIAACTLFLIIYWLS 240

Query: 241 K 242
           K
Sbjct: 241 K 241

[Close]

BLAST of Lsi01G020270 vs. ExPASy TrEMBL
Match: A0A6J1EHC9 (Golgi SNAP receptor complex member 1 OS=Cucurbita moschata OX=3662 GN=LOC111432538 PE=3 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 1.3e-123
Identity = 234/241 (97.10%), Postives = 237/241 (98.34%), Query Frame = 0


Query: 1   MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSGSPSVGSNR 60
           MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDS SPSVG NR
Sbjct: 1   MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSSSPSVGPNR 60

Query: 61  SWKSMEMEIESLLEKLLDVNDSMSRCAASAASATSINQKLARHRDILHEFTQEFKRIKGN 120
           SWKSMEMEI+SLLEKLLDVNDSMSRCAA AA ATSINQKLARHRDILHEFTQEFKRIKGN
Sbjct: 61  SWKSMEMEIQSLLEKLLDVNDSMSRCAAFAAPATSINQKLARHRDILHEFTQEFKRIKGN 120

Query: 121 INSMREHAELLSSVRDDINEYKSPGTMSPRVQLLRERAAIHGSIAHMDEVISQAQTTRAV 180
           INSMREHAELLSSVRDDINEYKSPGTMSPR+QLLRERAAIHGSIAHMDEVISQAQTTRAV
Sbjct: 121 INSMREHAELLSSVRDDINEYKSPGTMSPRMQLLRERAAIHGSIAHMDEVISQAQTTRAV 180

Query: 181 LGNQRALFGDVQGKVKLLSDKFPVIRGLLGSIRRRRSRDTLILSGVVAACTLFLIIYWLS 240
           LGNQRALFGDVQGKVKLLSDKFPVIRGLLGSIRRRRSRDTLILSGV+AACTLFLIIYWLS
Sbjct: 181 LGNQRALFGDVQGKVKLLSDKFPVIRGLLGSIRRRRSRDTLILSGVIAACTLFLIIYWLS 240

Query: 241 K 242
           K
Sbjct: 241 K 241

[Close]

BLAST of Lsi01G020270 vs. ExPASy TrEMBL
Match: A0A6J1E2K9 (Golgi SNAP receptor complex member 1 OS=Momordica charantia OX=3673 GN=LOC111025439 PE=3 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 2.6e-119
Identity = 223/241 (92.53%), Postives = 235/241 (97.51%), Query Frame = 0


Query: 1   MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSGSPSVGSNR 60
           M MTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSGS  VGSNR
Sbjct: 1   MPMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSGSSPVGSNR 60

Query: 61  SWKSMEMEIESLLEKLLDVNDSMSRCAASAASATSINQKLARHRDILHEFTQEFKRIKGN 120
           SWKSMEMEI+SLLEKLLD NDSMSRCAASA+ ATS+NQKLARHRDILH+FTQEFKRIKGN
Sbjct: 61  SWKSMEMEIQSLLEKLLDANDSMSRCAASASPATSVNQKLARHRDILHDFTQEFKRIKGN 120

Query: 121 INSMREHAELLSSVRDDINEYKSPGTMSPRVQLLRERAAIHGSIAHMDEVISQAQTTRAV 180
           INSMREHAELLSSVRDDI+EYKS GTMSP++QLLRERA+IHGSIAHMDEVISQAQTTRAV
Sbjct: 121 INSMREHAELLSSVRDDISEYKSSGTMSPKMQLLRERASIHGSIAHMDEVISQAQTTRAV 180

Query: 181 LGNQRALFGDVQGKVKLLSDKFPVIRGLLGSIRRRRSRDTLILSGVVAACTLFLIIYWLS 240
           LGNQRA+FGDVQGKVKLLSDKFPVIRGLLGSIRR+RSRDTLILSGV+AACTLFLI+YWLS
Sbjct: 181 LGNQRAMFGDVQGKVKLLSDKFPVIRGLLGSIRRKRSRDTLILSGVIAACTLFLIVYWLS 240

Query: 241 K 242
           K
Sbjct: 241 K 241

[Close]

BLAST of Lsi01G020270 vs. NCBI nr
Match: XP_011653862.1 (Golgi SNAP receptor complex member 1-2 [Cucumis sativus] >KGN54734.1 hypothetical protein Csa_012293 [Cucumis sativus])

HSP 1 Score: 456.4 bits (1173), Expect = 1.5e-124
Identity = 235/241 (97.51%), Postives = 239/241 (99.17%), Query Frame = 0


Query: 1   MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSGSPSVGSNR 60
           MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSGSPSVGSNR
Sbjct: 1   MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSGSPSVGSNR 60

Query: 61  SWKSMEMEIESLLEKLLDVNDSMSRCAASAASATSINQKLARHRDILHEFTQEFKRIKGN 120
           SWKSMEMEI+SLLEKLLDVNDSMSRCAASA  ATSINQKLARHRDILHEFTQEFKRIKGN
Sbjct: 61  SWKSMEMEIQSLLEKLLDVNDSMSRCAASATPATSINQKLARHRDILHEFTQEFKRIKGN 120

Query: 121 INSMREHAELLSSVRDDINEYKSPGTMSPRVQLLRERAAIHGSIAHMDEVISQAQTTRAV 180
           INSMREHAELLSSVRDDINEYKSPGTMSPRVQLLRERAAIHGSIAHMDEVISQAQTTRAV
Sbjct: 121 INSMREHAELLSSVRDDINEYKSPGTMSPRVQLLRERAAIHGSIAHMDEVISQAQTTRAV 180

Query: 181 LGNQRALFGDVQGKVKLLSDKFPVIRGLLGSIRRRRSRDTLILSGVVAACTLFLIIYWLS 240
           LGNQRALFGDVQGKVK+LSDKFPVIRGLLGSIRRRRSRDT+ILSGV+AACTLFLIIYWLS
Sbjct: 181 LGNQRALFGDVQGKVKVLSDKFPVIRGLLGSIRRRRSRDTIILSGVIAACTLFLIIYWLS 240

Query: 241 K 242
           K
Sbjct: 241 K 241

[Close]

BLAST of Lsi01G020270 vs. NCBI nr
Match: XP_038880891.1 (Golgi SNAP receptor complex member 1-2-like isoform X3 [Benincasa hispida])

HSP 1 Score: 453.8 bits (1166), Expect = 9.6e-124
Identity = 233/241 (96.68%), Postives = 239/241 (99.17%), Query Frame = 0


Query: 1   MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSGSPSVGSNR 60
           MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLG RFTQGG+VDSGSPSVGSNR
Sbjct: 1   MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGPRFTQGGFVDSGSPSVGSNR 60

Query: 61  SWKSMEMEIESLLEKLLDVNDSMSRCAASAASATSINQKLARHRDILHEFTQEFKRIKGN 120
           SWKSMEMEI+SLLEKLLDVNDSMSRCAASAA ATSINQKLARHRDILHEFTQEFKRIKGN
Sbjct: 61  SWKSMEMEIQSLLEKLLDVNDSMSRCAASAAPATSINQKLARHRDILHEFTQEFKRIKGN 120

Query: 121 INSMREHAELLSSVRDDINEYKSPGTMSPRVQLLRERAAIHGSIAHMDEVISQAQTTRAV 180
           INSMREHAELL+SVRDDINEYKSPGTMSPRVQLLRERAAIHGSIAHMDEVISQAQTTRAV
Sbjct: 121 INSMREHAELLNSVRDDINEYKSPGTMSPRVQLLRERAAIHGSIAHMDEVISQAQTTRAV 180

Query: 181 LGNQRALFGDVQGKVKLLSDKFPVIRGLLGSIRRRRSRDTLILSGVVAACTLFLIIYWLS 240
           LGNQRALFGDVQGKVKLLSDKFPVIRGLLGSIRRRRSRDT+ILSGV+AACTLFL+IYWLS
Sbjct: 181 LGNQRALFGDVQGKVKLLSDKFPVIRGLLGSIRRRRSRDTIILSGVIAACTLFLVIYWLS 240

Query: 241 K 242
           K
Sbjct: 241 K 241

[Close]

BLAST of Lsi01G020270 vs. NCBI nr
Match: XP_008449502.1 (PREDICTED: Golgi SNAP receptor complex member 1-2 [Cucumis melo])

HSP 1 Score: 453.0 bits (1164), Expect = 1.6e-123
Identity = 234/241 (97.10%), Postives = 237/241 (98.34%), Query Frame = 0


Query: 1   MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSGSPSVGSNR 60
           MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSGS SVGSNR
Sbjct: 1   MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSGSSSVGSNR 60

Query: 61  SWKSMEMEIESLLEKLLDVNDSMSRCAASAASATSINQKLARHRDILHEFTQEFKRIKGN 120
           SWKSMEMEI+SLLEKLLDVNDSMSRCAASA  ATSINQKLARHRDILHEFTQEFKRIKGN
Sbjct: 61  SWKSMEMEIQSLLEKLLDVNDSMSRCAASATPATSINQKLARHRDILHEFTQEFKRIKGN 120

Query: 121 INSMREHAELLSSVRDDINEYKSPGTMSPRVQLLRERAAIHGSIAHMDEVISQAQTTRAV 180
           INSMREHAELLSSVRDDINEYKSPGTMSPRVQLLRERAAIHGSIAHMDEVISQAQTTRAV
Sbjct: 121 INSMREHAELLSSVRDDINEYKSPGTMSPRVQLLRERAAIHGSIAHMDEVISQAQTTRAV 180

Query: 181 LGNQRALFGDVQGKVKLLSDKFPVIRGLLGSIRRRRSRDTLILSGVVAACTLFLIIYWLS 240
           LGNQR LFGDVQGKVKLLSDKFPVIRGLLGSIRRRRSRDT+ILSGV+AACTLFLIIYWLS
Sbjct: 181 LGNQRVLFGDVQGKVKLLSDKFPVIRGLLGSIRRRRSRDTIILSGVIAACTLFLIIYWLS 240

Query: 241 K 242
           K
Sbjct: 241 K 241

[Close]

BLAST of Lsi01G020270 vs. NCBI nr
Match: XP_022925235.1 (Golgi SNAP receptor complex member 1-2 [Cucurbita moschata] >XP_022966602.1 Golgi SNAP receptor complex member 1-2 [Cucurbita maxima] >XP_023518706.1 Golgi SNAP receptor complex member 1-2 [Cucurbita pepo subsp. pepo] >KAG6595719.1 Golgi SNAP receptor complex member 1-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027683.1 Golgi SNAP receptor complex member 1-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 452.2 bits (1162), Expect = 2.8e-123
Identity = 234/241 (97.10%), Postives = 237/241 (98.34%), Query Frame = 0


Query: 1   MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSGSPSVGSNR 60
           MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDS SPSVG NR
Sbjct: 1   MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSSSPSVGPNR 60

Query: 61  SWKSMEMEIESLLEKLLDVNDSMSRCAASAASATSINQKLARHRDILHEFTQEFKRIKGN 120
           SWKSMEMEI+SLLEKLLDVNDSMSRCAA AA ATSINQKLARHRDILHEFTQEFKRIKGN
Sbjct: 61  SWKSMEMEIQSLLEKLLDVNDSMSRCAAFAAPATSINQKLARHRDILHEFTQEFKRIKGN 120

Query: 121 INSMREHAELLSSVRDDINEYKSPGTMSPRVQLLRERAAIHGSIAHMDEVISQAQTTRAV 180
           INSMREHAELLSSVRDDINEYKSPGTMSPR+QLLRERAAIHGSIAHMDEVISQAQTTRAV
Sbjct: 121 INSMREHAELLSSVRDDINEYKSPGTMSPRMQLLRERAAIHGSIAHMDEVISQAQTTRAV 180

Query: 181 LGNQRALFGDVQGKVKLLSDKFPVIRGLLGSIRRRRSRDTLILSGVVAACTLFLIIYWLS 240
           LGNQRALFGDVQGKVKLLSDKFPVIRGLLGSIRRRRSRDTLILSGV+AACTLFLIIYWLS
Sbjct: 181 LGNQRALFGDVQGKVKLLSDKFPVIRGLLGSIRRRRSRDTLILSGVIAACTLFLIIYWLS 240

Query: 241 K 242
           K
Sbjct: 241 K 241

[Close]

BLAST of Lsi01G020270 vs. NCBI nr
Match: XP_038889826.1 (Golgi SNAP receptor complex member 1-2-like [Benincasa hispida])

HSP 1 Score: 443.0 bits (1138), Expect = 1.7e-120
Identity = 229/241 (95.02%), Postives = 234/241 (97.10%), Query Frame = 0


Query: 1   MAMTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSGSPSVGSNR 60
           MAM DQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQG YVDS S SVGSNR
Sbjct: 1   MAMKDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGAYVDSSSQSVGSNR 60

Query: 61  SWKSMEMEIESLLEKLLDVNDSMSRCAASAASATSINQKLARHRDILHEFTQEFKRIKGN 120
           SWKSMEMEI+SLLEKLLDVNDSMSRCA SAA ATSINQKLARH+DILHEFTQEFKRIKGN
Sbjct: 61  SWKSMEMEIQSLLEKLLDVNDSMSRCAVSAAPATSINQKLARHKDILHEFTQEFKRIKGN 120

Query: 121 INSMREHAELLSSVRDDINEYKSPGTMSPRVQLLRERAAIHGSIAHMDEVISQAQTTRAV 180
           INSMREHAELLSSVRDDINEYK PGTMSPRVQL+RERAAIHGSIAHMDEVISQAQTTRAV
Sbjct: 121 INSMREHAELLSSVRDDINEYKLPGTMSPRVQLVRERAAIHGSIAHMDEVISQAQTTRAV 180

Query: 181 LGNQRALFGDVQGKVKLLSDKFPVIRGLLGSIRRRRSRDTLILSGVVAACTLFLIIYWLS 240
           LGNQRALFGDVQGKVKLLSDKFPVIRGLLGSIRRRRSRDT+ILSGV+AACTLFLIIYWLS
Sbjct: 181 LGNQRALFGDVQGKVKLLSDKFPVIRGLLGSIRRRRSRDTIILSGVIAACTLFLIIYWLS 240

Query: 241 K 242
           K
Sbjct: 241 K 241

[Close]

BLAST of Lsi01G020270 vs. TAIR 10
Match: AT2G45200.1 (golgi snare 12 )

HSP 1 Score: 402.9 bits (1034), Expect = 1.8e-112
Identity = 202/239 (84.52%), Postives = 225/239 (94.14%), Query Frame = 0


Query: 3   MTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSGSPSVGSNRSW 62
           MT+ SL+LQESGWEELRREARKIEGDLDVKLSSYAKLG RFTQGGYVD+GSP+VGS RSW
Sbjct: 1   MTESSLDLQESGWEELRREARKIEGDLDVKLSSYAKLGARFTQGGYVDTGSPTVGSGRSW 60

Query: 63  KSMEMEIESLLEKLLDVNDSMSRCAASAASATSINQKLARHRDILHEFTQEFKRIKGNIN 122
           KSMEMEI+SLLEKLLD+NDSMSRCAASAA  TS+ QKLARHRDILHE+TQEF+RIKGNIN
Sbjct: 61  KSMEMEIQSLLEKLLDINDSMSRCAASAAPTTSVTQKLARHRDILHEYTQEFRRIKGNIN 120

Query: 123 SMREHAELLSSVRDDINEYKSPGTMSPRVQLLRERAAIHGSIAHMDEVISQAQTTRAVLG 182
           S+REHAELLSSVRDDI+EYK+ G+MSP VQ+LRERA+IHGSI+H+D+VI QAQ TRAVLG
Sbjct: 121 SLREHAELLSSVRDDISEYKASGSMSPGVQVLRERASIHGSISHIDDVIGQAQATRAVLG 180

Query: 183 NQRALFGDVQGKVKLLSDKFPVIRGLLGSIRRRRSRDTLILSGVVAACTLFLIIYWLSK 242
           +QR+LF DVQGKVK L DKFPVIRGLLGSI+R+RSRDTLILS V+AACTLFLIIYWLSK
Sbjct: 181 SQRSLFSDVQGKVKNLGDKFPVIRGLLGSIKRKRSRDTLILSAVIAACTLFLIIYWLSK 239

[Close]

BLAST of Lsi01G020270 vs. TAIR 10
Match: AT2G45200.2 (golgi snare 12 )

HSP 1 Score: 391.7 bits (1005), Expect = 4.2e-109
Identity = 202/257 (78.60%), Postives = 225/257 (87.55%), Query Frame = 0


Query: 3   MTDQSLELQESGWEELRREARKIEGDLDVKLSSYAKLGTRFTQG---------------- 62
           MT+ SL+LQESGWEELRREARKIEGDLDVKLSSYAKLG RFTQG                
Sbjct: 1   MTESSLDLQESGWEELRREARKIEGDLDVKLSSYAKLGARFTQGDTDLVMNYEKVLKCVL 60

Query: 63  --GYVDSGSPSVGSNRSWKSMEMEIESLLEKLLDVNDSMSRCAASAASATSINQKLARHR 122
             GYVD+GSP+VGS RSWKSMEMEI+SLLEKLLD+NDSMSRCAASAA  TS+ QKLARHR
Sbjct: 61  VSGYVDTGSPTVGSGRSWKSMEMEIQSLLEKLLDINDSMSRCAASAAPTTSVTQKLARHR 120

Query: 123 DILHEFTQEFKRIKGNINSMREHAELLSSVRDDINEYKSPGTMSPRVQLLRERAAIHGSI 182
           DILHE+TQEF+RIKGNINS+REHAELLSSVRDDI+EYK+ G+MSP VQ+LRERA+IHGSI
Sbjct: 121 DILHEYTQEFRRIKGNINSLREHAELLSSVRDDISEYKASGSMSPGVQVLRERASIHGSI 180

Query: 183 AHMDEVISQAQTTRAVLGNQRALFGDVQGKVKLLSDKFPVIRGLLGSIRRRRSRDTLILS 242
           +H+D+VI QAQ TRAVLG+QR+LF DVQGKVK L DKFPVIRGLLGSI+R+RSRDTLILS
Sbjct: 181 SHIDDVIGQAQATRAVLGSQRSLFSDVQGKVKNLGDKFPVIRGLLGSIKRKRSRDTLILS 240

[Close]

BLAST of Lsi01G020270 vs. TAIR 10
Match: AT1G15880.1 (golgi snare 11 )

HSP 1 Score: 131.3 bits (329), Expect = 1.0e-30
Identity = 81/230 (35.22%), Postives = 125/230 (54.35%), Query Frame = 0


Query: 13  SGWEELRREARKIEGDLDVKLSSYAKLGTRFTQGGYVDSGSPSVGSNRSWKSMEMEIESL 72
           S W+ LR++ARKIE  LD ++ SY +L +  T+      G+ S         +E  I+ L
Sbjct: 5   SSWDALRKQARKIEAQLDEQMHSYRRLVS--TKALSKSDGNES--------DLEAGIDLL 64

Query: 73  LEKLLDVNDSMSRCAASAASATSINQKLARHRDILHEFTQEFKRIKGNINSMREHAELLS 132
           L +L  VN  M    +S  S   ++  L RH++IL + TQEF R + ++ + +EHA LL 
Sbjct: 65  LRQLQQVNAQMQAWVSSGGS-EMVSHTLTRHQEILQDLTQEFYRHRSSLRAKQEHASLLE 124

Query: 133 SVRD-DINEYKSPGTMSPRVQLLRERAAIHGSIAHMDEVISQAQTTRAVLGNQRALFGDV 192
             R+ D               L++E   I+ + A MD VISQAQ T   L  QR+ FG +
Sbjct: 125 DFREFDRTRLDLEDGYGSEQALIKEHMGINRNTAQMDGVISQAQATLGTLVFQRSTFGGI 184

Query: 193 QGKVKLLSDKFPVIRGLLGSIRRRRSRDTLILSGVVAACTLFLIIYWLSK 242
             K+  ++ + P +  +L +I+R++S DT+ILS V A CT  + IYW++K
Sbjct: 185 NSKLSNVASRLPTVNTILAAIKRKKSMDTIILSLVAAVCTFLIFIYWITK 223

The following BLAST results are available for this feature:

BLAST of Lsi01G020270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22151	5.9e-108	78.60	Golgi SNAP receptor complex member 1-2 OS=Arabidopsis thaliana OX=3702 GN=GOS12 ...	[more]
O88630	5.1e-35	36.40	Golgi SNAP receptor complex member 1 OS=Mus musculus OX=10090 GN=Gosr1 PE=1 SV=2	[more]
O08522	4.3e-34	35.98	Golgi SNAP receptor complex member 1 OS=Cricetulus griseus OX=10029 GN=GOSR1 PE=...	[more]
Q5RBL6	4.3e-34	37.13	Golgi SNAP receptor complex member 1 OS=Pongo abelii OX=9601 GN=GOSR1 PE=2 SV=1	[more]
Q62931	4.3e-34	35.98	Golgi SNAP receptor complex member 1 OS=Rattus norvegicus OX=10116 GN=Gosr1 PE=1...	[more]

BLAST of Lsi01G020270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L102	7.2e-125	97.51	Golgi SNAP receptor complex member 1 OS=Cucumis sativus OX=3659 GN=Csa_4G438030 ...	[more]
A0A1S3BN37	7.9e-124	97.10	Golgi SNAP receptor complex member 1 OS=Cucumis melo OX=3656 GN=LOC103491367 PE=...	[more]
A0A6J1HNF7	1.3e-123	97.10	Golgi SNAP receptor complex member 1 OS=Cucurbita maxima OX=3661 GN=LOC111466232...	[more]
A0A6J1EHC9	1.3e-123	97.10	Golgi SNAP receptor complex member 1 OS=Cucurbita moschata OX=3662 GN=LOC1114325...	[more]
A0A6J1E2K9	2.6e-119	92.53	Golgi SNAP receptor complex member 1 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]

BLAST of Lsi01G020270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653862.1	1.5e-124	97.51	Golgi SNAP receptor complex member 1-2 [Cucumis sativus] >KGN54734.1 hypothetica...	[more]
XP_038880891.1	9.6e-124	96.68	Golgi SNAP receptor complex member 1-2-like isoform X3 [Benincasa hispida]	[more]
XP_008449502.1	1.6e-123	97.10	PREDICTED: Golgi SNAP receptor complex member 1-2 [Cucumis melo]	[more]
XP_022925235.1	2.8e-123	97.10	Golgi SNAP receptor complex member 1-2 [Cucurbita moschata] >XP_022966602.1 Golg...	[more]
XP_038889826.1	1.7e-120	95.02	Golgi SNAP receptor complex member 1-2-like [Benincasa hispida]	[more]

BLAST of Lsi01G020270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45200.1	1.8e-112	84.52	golgi snare 12	[more]
AT2G45200.2	4.2e-109	78.60	golgi snare 12	[more]
AT1G15880.1	1.0e-30	35.22	golgi snare 11	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023601	Golgi SNAP receptor complex, subunit 1	PIRSF	PIRSF027109	Golgi_SNARE	coord: 2..240 e-value: 2.5E-76 score: 254.2
IPR023601	Golgi SNAP receptor complex, subunit 1	PANTHER	PTHR21094	GOS-28 SNARE- RELATED	coord: 5..241
None	No IPR available	PFAM	PF12352	V-SNARE_C	coord: 152..216 e-value: 3.4E-15 score: 56.1
None	No IPR available	PANTHER	PTHR21094:SF2	GOLGI SNAP RECEPTOR COMPLEX MEMBER 1-2	coord: 5..241

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G020270.1	Lsi01G020270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0015031	protein transport
biological_process	GO:0006906	vesicle fusion
cellular_component	GO:0005801	cis-Golgi network
cellular_component	GO:0005797	Golgi medial cisterna
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031201	SNARE complex
molecular_function	GO:0005484	SNAP receptor activity