Lsi01G020250 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G020250
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	FRIGIDA-like protein
Location	chr01: 27734955 .. 27739509 (-)
RNA-Seq Expression	Lsi01G020250
Synteny	Lsi01G020250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGGTATCTGCCTCTTGAAAATACTATTCAAACACACAAGATTTCCTTAAGGCAAATTCCAAGTTCTTCAGCCTATTGTAGAAGACTGAGATCTCCGTCTCTCTCACCCTTAAGAAAGATAACCAAAAACAAGCCTACCTCTCACCCTCCTCCTCGAATTACATTGTCAATTCCTTTCTTACCCCTATGGCAATGTTTAAATATAATTGGAGGCCTAATAGCATGTTTCCTCGTCCATGGCCACCTGAGCGTCGAGTGATGCATGCCATATATTTCTTAATAATGACCAAAGAAGCATGGTTATGGAGATTAGACCGACATGGACATGGTGACATGTCATTTTTTAAAAAATTTAGAGCATTGATAATGATACAACAAAGACACATTTAGTTAAATATACATTTTTTAAAATATATATAATTAAGAAATTTAAAATCATTAAGTTTATGTATGCCTTAAACTTCATATGATGAAGGTTTTTTTATCTCATCCTTTATGGATTGGCTTGTATCTTTTCTTTCCCCTCATTGTATATCCTAGTTTGTATCTTTCATTTGGGATTTGCTTTTGTTTTGTATTTGGGTGTTTTTCCTATTGGATTATGTTAGGAACCAAGGTAGTATGGGTTCCCTTTGTCCCACATCAGTTAGAATGGGATGACCAATGTGGTACTTTAGTGGCTTGACTCTCTCACCTTAATAGTTGGCTTTTGGGATGTGGTTCTCCAAGGTGCTTAAGTACCTAATAATGGTATCAGAGTTGGTTGTTGACGTTCCAAAGGGGAGCACAGGGAGGGTTTTGATCGGGTGTTTTCGAGTGAAGCATCATCAGTTTAGCTGCCGGGTTGTTTGCTTTTCAATAGTGGAGTATTGTTAGGAACCAAGGTAGTATGGTTACCTTTGTCCTACATCGGTTAGAATGGGATGACCAATGTGGTACTTAAGTAGCTTGGCTCTCTCATCTCAATAGCTGGCTTTTGGGGTGTGGTTCTTCAAGGTGCTTAAGTACCTAACAGATTATCTCCATTGTACTCTTTGGATATTTCACATCAATGAAATTGTTTCTTATCCAAAAAAAAAGTTTGCCTTGAAAATGACGTATTTTTCCCTCAAAATTTATTAATCTTGTTCCACATTACTATTTGTTTCCTTATGCTTCACCAATGTTTGATACATGTCTAGCAAATTTTGGACCCACACTTTATACAACTAGTATTTGAACACAACTATTGTGCTAGCTAGTATTCGCTACCTGTCCAACAAGTGTACATTACCCAAACTTCGCTCATCTTTTGGGATTTGATGCTATCCACCCTCAGCTGGTTCACAACCTCATCAAAGGAGCCACCACATGCACACACAACATGCTATCTTTTGTCCTTGAAGCATCCTTTGACGAGGGAGGAAAACCCTTGAGCCCATCTATCAGGACATTGTTATGGTCCACTGAGAAAGAAAGAAGCAACCAAATGCTCAATGAAAAGAAGAAAACTTTTGATAGTTTGAATCTTTGTCGTTTTTGCCCTCACTTAGTGTGGAAATTATCCTCAATTTCAGAGTATTAGCATGCTTTCTCTTTTGTCCAGTTGGAGGTGTTCTTTGTAAACCTCCCTTGGATTGGGGAATTACTTTTCTCCCCCTTAACATTTTGTAATTCCGTCTCATCAGTTCTTGTTTCCTATCAAAATAAAAAAATAAAAAATAAAAATAAAAGCGAGTCAACTTTAAATTGCATTTTCTCCACAATTAAGAATTTGACTTTCAGGTATTTTATATGCTGATAATGCATAAGTAGTAACGAAGATTTCAATTTCCTTAATATCTGTAAGTTGCTTGTTCAACCTTGGAGTCTGATTGGCATATGTTTGATTGCCTCTGCTAGTTTAGATCAATTCCCATTCTCATTTGGCTGCTTGACTATTATATAACAGACATTATAAAGGGGATGATGAAGAACAGTAAGAATGTTGAAGCTGTTGATATTATTTATGCTTTTGGTATGGAGGATGTATTTCCACCACAGGAAATTCTGTTGTCATTTCTCCAAGAGTGTGATGAAACGTGGAAAAAAAGAATAAATGAAGTACGAGGTTCAACCATGCAACTGGTATGGTTTATCTCGACCTATGGGCATTAATTTAGTCTTTATAAATTATAATTAATTTATTCTTAAATTATAATTAATTTATTCTTTCTTCTTTTTTTTCTTTTTTTCTTTTTTTCTTCTTGAACATAACTTTTCATTGATTAGTGAAAAGTTACAATATCAGGACTAATTTCCCAACTTTCTAGTGTAAGACCAATTGAATATCCCATCGCTTCTAATAACCTGCCTGACCCAAACTTGAATACGAAGGTAATAGAGTTCTGAAAATATTTGGAAAGAGTACACCAAGAAGCTCTTTCCTTCCTAAGTTGGGATTGGATTCTTTAAGTTTCTCTGAGAATGATACCATTCATTTAATTTGTAATGTTCTCTCCTTTCAAGGTTTTATGTTCCCCATCCAGAAAAATTAAAAGCAAAAGCAAAAGCAAAAACAAAAATAAACTGCTATACTATTACATATGTAGGATTTTTTTTGTTAATTATATATCTCATCCTTAGGATGTTTTGATTGGTCTTTATCGTAAGCCTAAGCAGCATGTGAGTTGAGTTGTATTTGATGCTTTATGGGTTTTGGGTTTTTTGTATTTGTTTATTCCTATTGAGTTATTTTCTTCTTTTGTCAGATGTAACTTATTTTTGTTTTTTTGAAATGGAGTGATTTTCACAAGTTTCAATTATATTCTCGAACCTTTGATTAGTTTTAGTCGAGTTTTTGTTATCAAATAAACAATAATGAAGCCAATATGTACCATAATTAGGAATTTGATGTGATTGGGTATTTGAAAATATCGACTATTGTGTATAACAAAATGAAGTCTAGTTCATTTGCCACATCGAGGGGAAAACCTCATTTTATAAGAAACATATTAACCGATGTTTTGAAGATAATCTTCCATACCGTATCCACATTTGATTTATTTAGAGCAGGAAGTCTTAGTGAAGAGTTCAATTGAAAATTTTAGATTAGAATAAATGCATAGTTAATGGGTGAAATTTGGGATTTGGAGATGGTTTTTCAAACCCTTGAAGTAGTGGAAAACTGAACCCTATGTTTACCACTGATATTTATTTTATTTTATTTATTTATTTTTAATTCTCTCAATGTGTGGTTTTGTTTAGTTTTCGTTGTCAAGCCTTGCCCAATTTGTTAGTTTTGCTCAGTGAATTTAGTTATGTTCTCTGAGGTTTCTCTTGGCAAATTCTGCTCCAACATCATTAACTTGTTCTTCTGCCTCTTGTTGAAATTACTTACCTTCTAGTTACATGGTTTTTGTCAGAGACGAGTGAGTGAAGAGAAATTGGCTTCTCTGAAATGTGTTCTGAAGTGTTTGGAAGATCACAAGTTGGATCCTGTGAAGTCTCTTCCTGGATGGAAAATTCACGAAATGATAAAAAATTTGGAGAAGGATATTGTGGAACTTGGGAAAAGAATGGAAGATAATGCGAGTATGAAGAGAAAAACAGATGAAGCTTCAACGCAGAAGTATCTGAGTCAGGAAATAAAGCGATCGCGAATGGCAGCAAGTAAAGGAGGATTCCCTGTTATGTCTTATCCAGTGAATGGGTTGTTGGAACAAAAGGCAGCCACATTTTTGGAGGACAAGAGCTGTTTTAGTAGTAGTAGTAGTTCGATGCCACAAAAGTTATTGGATGGTGGACGTGCTGCTCAGTTGGGTACTTACCAAATTGCTTCGTCTTTGCGTGGACCTGGTTTGGTTGAAACTAAAGTTTTGCCTTCCGACATTGGTAGTACTATCTCCATCTCCAATGCTGCCTCATTCCCAAGAGGAATGGGAATGGGAATGGGAAGGGACAGCAATGAGGCTTCCATTTACAAAATGGGGCCAACTCGTGAGTTAGCTTACAAAGATACATCAGTAGGCCAAAGCTTTATTCAACAAGCTATGCCTACAATTACGACAACGCCTACACCTACACCGCCGCCACCCGTAGAGTCTTATTCAGCTGTAGACGGGTTCATGGGACACACCACAAGCAATCATTTTGATCTGTATCATTTTGCTGATGCGGCCGTGTTTGAAAATGATGCACCCAAGAGCAGCAGCACTCAAACTGGTACTTTGTCTCGTCTTCGGCTGCCGCCCCATCATCACCATCCTCCCTACTTTTACAATTGATCCTAAATATCACTTCATTTCATAATATAACAAAAATAGCTGCTTCGACTTCAACTTTTGGATAGGATTTGTTGAAACACATTTTCTTGTCTCATCAGCAAAGGGATGGATGTATTAGTCTTTAAATTTATTAGGCAGGCTGATAGAATGTTCTTTACTTAACTTATGCATGTGAACTTTACATTTCAGTTATAACAATGTTATTCATCTGTTCCTGTTTATATCTCAATAGTAGTGTCATTTTTGTGCTTTGTTTTTTCCTCTCCTTTTCAACTTATGCCAAAACCGCTCTTTATTTATAGTTGGT

mRNA sequence

ATGAAAGACATTATAAAGGGGATGATGAAGAACAGTAAGAATGTTGAAGCTGTTGATATTATTTATGCTTTTGGTATGGAGGATGTATTTCCACCACAGGAAATTCTGTTGTCATTTCTCCAAGAGTGTGATGAAACGTGGAAAAAAAGAATAAATGAAGTACGAGGTTCAACCATGCAACTGAGACGAGTGAGTGAAGAGAAATTGGCTTCTCTGAAATGTGTTCTGAAGTGTTTGGAAGATCACAAGTTGGATCCTGTGAAGTCTCTTCCTGGATGGAAAATTCACGAAATGATAAAAAATTTGGAGAAGGATATTGTGGAACTTGGGAAAAGAATGGAAGATAATGCGAGTATGAAGAGAAAAACAGATGAAGCTTCAACGCAGAAGTATCTGAGTCAGGAAATAAAGCGATCGCGAATGGCAGCAAGTAAAGGAGGATTCCCTGTTATGTCTTATCCAGTGAATGGGTTGTTGGAACAAAAGGCAGCCACATTTTTGGAGGACAAGAGCTGTTTTAGTAGTAGTAGTAGTTCGATGCCACAAAAGTTATTGGATGGTGGACGTGCTGCTCAGTTGGGTACTTACCAAATTGCTTCGTCTTTGCGTGGACCTGGTTTGGTTGAAACTAAAGTTTTGCCTTCCGACATTGGTAGTACTATCTCCATCTCCAATGCTGCCTCATTCCCAAGAGGAATGGGAATGGGAATGGGAAGGGACAGCAATGAGGCTTCCATTTACAAAATGGGGCCAACTCGTGAGTTAGCTTACAAAGATACATCAGTAGGCCAAAGCTTTATTCAACAAGCTATGCCTACAATTACGACAACGCCTACACCTACACCGCCGCCACCCGTAGAGTCTTATTCAGCTGTAGACGGGTTCATGGGACACACCACAAGCAATCATTTTGATCTGTATCATTTTGCTGATGCGGCCGTGTTTGAAAATGATGCACCCAAGAGCAGCAGCACTCAAACTGGTACTTTGTCTCGTCTTCGGCTGCCGCCCCATCATCACCATCCTCCCTACTTTTACAATTGATCCTAAATATCACTTCATTTCATAATATAACAAAAATAGCTGCTTCGACTTCAACTTTTGGATAGGATTTGTTGAAACACATTTTCTTGTCTCATCAGCAAAGGGATGGATGTATTAGTCTTTAAATTTATTAGGCAGGCTGATAGAATGTTCTTTACTTAACTTATGCATGTGAACTTTACATTTCAGTTATAACAATGTTATTCATCTGTTCCTGTTTATATCTCAATAGTAGTGTCATTTTTGTGCTTTGTTTTTTCCTCTCCTTTTCAACTTATGCCAAAACCGCTCTTTATTTATAGTTGGT

Coding sequence (CDS)

ATGAAAGACATTATAAAGGGGATGATGAAGAACAGTAAGAATGTTGAAGCTGTTGATATTATTTATGCTTTTGGTATGGAGGATGTATTTCCACCACAGGAAATTCTGTTGTCATTTCTCCAAGAGTGTGATGAAACGTGGAAAAAAAGAATAAATGAAGTACGAGGTTCAACCATGCAACTGAGACGAGTGAGTGAAGAGAAATTGGCTTCTCTGAAATGTGTTCTGAAGTGTTTGGAAGATCACAAGTTGGATCCTGTGAAGTCTCTTCCTGGATGGAAAATTCACGAAATGATAAAAAATTTGGAGAAGGATATTGTGGAACTTGGGAAAAGAATGGAAGATAATGCGAGTATGAAGAGAAAAACAGATGAAGCTTCAACGCAGAAGTATCTGAGTCAGGAAATAAAGCGATCGCGAATGGCAGCAAGTAAAGGAGGATTCCCTGTTATGTCTTATCCAGTGAATGGGTTGTTGGAACAAAAGGCAGCCACATTTTTGGAGGACAAGAGCTGTTTTAGTAGTAGTAGTAGTTCGATGCCACAAAAGTTATTGGATGGTGGACGTGCTGCTCAGTTGGGTACTTACCAAATTGCTTCGTCTTTGCGTGGACCTGGTTTGGTTGAAACTAAAGTTTTGCCTTCCGACATTGGTAGTACTATCTCCATCTCCAATGCTGCCTCATTCCCAAGAGGAATGGGAATGGGAATGGGAAGGGACAGCAATGAGGCTTCCATTTACAAAATGGGGCCAACTCGTGAGTTAGCTTACAAAGATACATCAGTAGGCCAAAGCTTTATTCAACAAGCTATGCCTACAATTACGACAACGCCTACACCTACACCGCCGCCACCCGTAGAGTCTTATTCAGCTGTAGACGGGTTCATGGGACACACCACAAGCAATCATTTTGATCTGTATCATTTTGCTGATGCGGCCGTGTTTGAAAATGATGCACCCAAGAGCAGCAGCACTCAAACTGGTACTTTGTCTCGTCTTCGGCTGCCGCCCCATCATCACCATCCTCCCTACTTTTACAATTGA

Protein sequence

MKDIIKGMMKNSKNVEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLRRVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELGKRMEDNASMKRKTDEASTQKYLSQEIKRSRMAASKGGFPVMSYPVNGLLEQKAATFLEDKSCFSSSSSSMPQKLLDGGRAAQLGTYQIASSLRGPGLVETKVLPSDIGSTISISNAASFPRGMGMGMGRDSNEASIYKMGPTRELAYKDTSVGQSFIQQAMPTITTTPTPTPPPPVESYSAVDGFMGHTTSNHFDLYHFADAAVFENDAPKSSSTQTGTLSRLRLPPHHHHPPYFYN

Homology

[Close]

BLAST of Lsi01G020250 vs. ExPASy Swiss-Prot
Match: P0DH90 (Protein FRIGIDA OS=Arabidopsis thaliana OX=3702 GN=FRI PE=1 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 3.0e-20
Identity = 53/140 (37.86%), Postives = 90/140 (64.29%), Query Frame = 0


Query: 4   IIKGMMKNSKNVEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLRR 63
           I++  +K   ++EA++++Y FGMED F    +L SFL+   E++++   + + S +  + 
Sbjct: 320 IVESSIKRGMHIEALEMVYTFGMEDKFSAALVLTSFLKMSKESFERAKRKAQ-SPLAFKE 379

Query: 64  VSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELGKRMEDNASMKRKT 123
            + ++LA L  V++C+E HKLDP K LPGW+I E I +LEKD ++L K ME+ A      
Sbjct: 380 AATKQLAVLSSVMQCMETHKLDPAKELPGWQIKEQIVSLEKDTLQLDKEMEEKARSLSLM 439

Query: 124 DEASTQKYL-SQEIKRSRMA 143
           +EA+  K + +Q+IKR R++
Sbjct: 440 EEAALAKRMYNQQIKRPRLS 458

[Close]

BLAST of Lsi01G020250 vs. ExPASy Swiss-Prot
Match: Q9LUV4 (FRIGIDA-like protein 4a OS=Arabidopsis thaliana OX=3702 GN=FRL4A PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 5.4e-06
Identity = 29/111 (26.13%), Postives = 60/111 (54.05%), Query Frame = 0


Query: 1   MKDIIKGMMKNSKNVEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQ 60
           M D+I+ ++   + ++AV   Y  G+ D FPP  +L ++L++  ++    + +   +   
Sbjct: 303 MPDMIEELISRGQQLDAVHFTYEVGLVDKFPPVPLLKAYLRDAKKSAASIMEDSSNTGRA 362

Query: 61  LRRVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELGK 112
              V+ ++ ++LK VLKC+E++KL+  +  P   + + +  LEK   E  K
Sbjct: 363 THLVARKEQSALKAVLKCIEEYKLE--EEFPPENLKKRLDQLEKTKTEKRK 411

[Close]

BLAST of Lsi01G020250 vs. ExPASy Swiss-Prot
Match: Q67ZB3 (FRIGIDA-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=FRL3 PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.0e-04
Identity = 30/104 (28.85%), Postives = 55/104 (52.88%), Query Frame = 0


Query: 1   MKDIIKGMMKNSKNVEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQ 60
           M  +I+ ++ + K ++AV++ +AF + + F P  +L S+L E   +   +      S   
Sbjct: 353 MPGVIEVLVNSGKQIDAVNLAFAFELTEQFSPVSLLKSYLIEARRS-SPQGRPGNASPAV 412

Query: 61  LRRVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEK 105
               +E +L  LK V+KC+E+H L+  +  P   +H+ I  LEK
Sbjct: 413 QDEFNERELIGLKTVIKCIEEHSLE--EQYPVEPLHKRILQLEK 453

[Close]

BLAST of Lsi01G020250 vs. ExPASy Swiss-Prot
Match: Q940H8 (FRIGIDA-like protein 4b OS=Arabidopsis thaliana OX=3702 GN=FRL4B PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.3e-04
Identity = 27/111 (24.32%), Postives = 59/111 (53.15%), Query Frame = 0


Query: 1   MKDIIKGMMKNSKNVEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQ 60
           M D+I+ ++   + ++AV   +  G+  +FPP  +L ++L++  +      ++   S   
Sbjct: 301 MPDMIEELIIRGQQLDAVHFTFEVGLVHLFPPVPLLKAYLRDAKKATALITDDSNNSGRS 360

Query: 61  LRRVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELGK 112
              V+ ++ ++L+ VLKC+E++KL+  +  P   + + +  LEK   E  K
Sbjct: 361 AHLVARKEQSALRAVLKCIEEYKLE--EEFPPENLKKRLDQLEKTKTEKRK 409

[Close]

BLAST of Lsi01G020250 vs. ExPASy TrEMBL
Match: A0A1S3BM50 (FRIGIDA-like protein OS=Cucumis melo OX=3656 GN=LOC103491359 PE=3 SV=1)

HSP 1 Score: 590.9 bits (1522), Expect = 3.5e-165
Identity = 308/345 (89.28%), Postives = 325/345 (94.20%), Query Frame = 0


Query: 3   DIIKGMMKNSKNVEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLR 62
           DIIKGM K+SKN+EAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLR
Sbjct: 342 DIIKGMTKSSKNIEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLR 401

Query: 63  RVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELGKRMEDNASMKRK 122
           RVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVEL KRMEDNAS+KRK
Sbjct: 402 RVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELRKRMEDNASLKRK 461

Query: 123 TDEASTQKYLSQEIKRSRMAASKGGFPVMSYPVNGLLEQKAATFLEDKSCFSSSSSSMPQ 182
           TDEASTQKYLSQEIKRSR+ ASKGGFPVMSYPVNGLLEQ AATFLEDKSCFS+SSSSMPQ
Sbjct: 462 TDEASTQKYLSQEIKRSRL-ASKGGFPVMSYPVNGLLEQNAATFLEDKSCFSTSSSSMPQ 521

Query: 183 KLLDGGRAAQLGTYQIASSLRGPGLVETKVLPSDIGSTISISNAASFPRGMGMGMGRDSN 242
           KLLDGGRA+QLG YQIASSLRGPGL+ET VLP+DIGS I+ + AASFPR  GMG GRDSN
Sbjct: 522 KLLDGGRASQLGNYQIASSLRGPGLLETTVLPADIGSGIT-NAAASFPR--GMGRGRDSN 581

Query: 243 EASIYKMGPTRELAYKDTSVGQSFIQQAMPTITTTPTPTPPPPVESYSAVDGFMGHTTSN 302
           EASIYKMGPTRELAYKD SVGQSFIQQAMPT+ TTPTP PP  VE YSAVDGFMGH+TSN
Sbjct: 582 EASIYKMGPTRELAYKDISVGQSFIQQAMPTLATTPTP-PPTTVEPYSAVDGFMGHSTSN 641

Query: 303 HFDLYHFADAAVFENDAPKSSSTQTGTLSRLRLPPHHHHPPYFYN 348
           +FDLYHFADAAVFEND PK+S++QTGTLSRLRL PH+HHPPYFYN
Sbjct: 642 NFDLYHFADAAVFENDLPKNSTSQTGTLSRLRL-PHNHHPPYFYN 680

[Close]

BLAST of Lsi01G020250 vs. ExPASy TrEMBL
Match: A0A0A0KYX9 (FRIGIDA-like protein OS=Cucumis sativus OX=3659 GN=Csa_4G437530 PE=3 SV=1)

HSP 1 Score: 589.3 bits (1518), Expect = 1.0e-164
Identity = 306/346 (88.44%), Postives = 321/346 (92.77%), Query Frame = 0


Query: 3   DIIKGMMKNSKNVEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLR 62
           DIIKGM K+SKN+EAVDIIYAFGME+VFPPQEILLSFLQECDETWKKRIN+VRGSTMQLR
Sbjct: 270 DIIKGMTKSSKNIEAVDIIYAFGMENVFPPQEILLSFLQECDETWKKRINKVRGSTMQLR 329

Query: 63  RVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELGKRMEDNASMKRK 122
           RVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELGKRMEDNAS+KRK
Sbjct: 330 RVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELGKRMEDNASLKRK 389

Query: 123 TDEASTQKYLSQEIKRSRMAASKGGFPVMSYPVNGLLEQKAATFLEDKSCFSSSSSSMPQ 182
           TDEASTQKYLSQEIKRSRM+A+KGGFPVMSYPVNGLLEQ A TFLEDKSCFS+SSSSMP 
Sbjct: 390 TDEASTQKYLSQEIKRSRMSANKGGFPVMSYPVNGLLEQNATTFLEDKSCFSTSSSSMPL 449

Query: 183 KLLDGGRAAQLGTYQIASSLRGPGLVETKVLPSD-IGSTISISNAASFPRGMGMGMGRDS 242
           KLLDGGRA+QLG YQIASSLRGPGLVET VLP+D IGS IS + AA FPRGMG G GRDS
Sbjct: 450 KLLDGGRASQLGNYQIASSLRGPGLVETTVLPADIIGSGIS-NAAAPFPRGMGWGRGRDS 509

Query: 243 NEASIYKMGPTRELAYKDTSVGQSFIQQAMPTITTTPTPTPPPPVESYSAVDGFMGHTTS 302
           NEASIYKMGPTRE AYKD SVGQSFIQQAMPT+ TTPTP PP  VE YSAV GFMGH+TS
Sbjct: 510 NEASIYKMGPTREFAYKDISVGQSFIQQAMPTLATTPTP-PPTTVEPYSAVYGFMGHSTS 569

Query: 303 NHFDLYHFADAAVFENDAPKSSSTQTGTLSRLRLPPHHHHPPYFYN 348
           N+FDLYHFADAAVFEND PK+ STQTGTLSRLRL PHHHHP YFYN
Sbjct: 570 NNFDLYHFADAAVFENDLPKNRSTQTGTLSRLRL-PHHHHPSYFYN 612

[Close]

BLAST of Lsi01G020250 vs. ExPASy TrEMBL
Match: A0A5D3DV89 (FRIGIDA-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G001270 PE=3 SV=1)

HSP 1 Score: 587.0 bits (1512), Expect = 5.1e-164
Identity = 307/345 (88.99%), Postives = 324/345 (93.91%), Query Frame = 0


Query: 3   DIIKGMMKNSKNVEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLR 62
           DIIKGM K+SKN+EAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLR
Sbjct: 342 DIIKGMTKSSKNIEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLR 401

Query: 63  RVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELGKRMEDNASMKRK 122
           RVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVEL KRMEDNAS+KRK
Sbjct: 402 RVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELRKRMEDNASLKRK 461

Query: 123 TDEASTQKYLSQEIKRSRMAASKGGFPVMSYPVNGLLEQKAATFLEDKSCFSSSSSSMPQ 182
           TDEASTQKYLSQEIKRSR+ ASKGGFPVMSYPVNGLLEQ AATFLEDKSCFS+SSSSMPQ
Sbjct: 462 TDEASTQKYLSQEIKRSRL-ASKGGFPVMSYPVNGLLEQNAATFLEDKSCFSTSSSSMPQ 521

Query: 183 KLLDGGRAAQLGTYQIASSLRGPGLVETKVLPSDIGSTISISNAASFPRGMGMGMGRDSN 242
           KLLDGGRA+QLG YQIASSLRGPGL+ET VLP+DIGS I+ + AASF R  GMG GRDSN
Sbjct: 522 KLLDGGRASQLGNYQIASSLRGPGLLETTVLPADIGSGIT-NAAASFLR--GMGRGRDSN 581

Query: 243 EASIYKMGPTRELAYKDTSVGQSFIQQAMPTITTTPTPTPPPPVESYSAVDGFMGHTTSN 302
           EASIYKMGPTRELAYKD SVGQSFIQQAMPT+ TTPTP PP  VE YSAVDGFMGH+TSN
Sbjct: 582 EASIYKMGPTRELAYKDISVGQSFIQQAMPTLATTPTP-PPTTVEPYSAVDGFMGHSTSN 641

Query: 303 HFDLYHFADAAVFENDAPKSSSTQTGTLSRLRLPPHHHHPPYFYN 348
           +FDLYHFADAAVFEND PK+S++QTGTLSRLRL PH+HHPPYFYN
Sbjct: 642 NFDLYHFADAAVFENDLPKNSTSQTGTLSRLRL-PHNHHPPYFYN 680

[Close]

BLAST of Lsi01G020250 vs. ExPASy TrEMBL
Match: A0A6J1DVP1 (FRIGIDA-like protein OS=Momordica charantia OX=3673 GN=LOC111024877 PE=3 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 7.8e-141
Identity = 267/344 (77.62%), Postives = 289/344 (84.01%), Query Frame = 0


Query: 3   DIIKGMMKNSKNVEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLR 62
           DIIKGM K S NVEAVDI+YAFG+ED F PQEILLSFLQECDETWK++INEVRGSTMQLR
Sbjct: 315 DIIKGMTKKSMNVEAVDIVYAFGLEDSFSPQEILLSFLQECDETWKRKINEVRGSTMQLR 374

Query: 63  RVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELGKRMEDNASMKRK 122
           RV+EEKLASLKCVLKCL+DHKLDPVK LPGWKIHEMIKNLEKDI EL KRMED  SMKRK
Sbjct: 375 RVNEEKLASLKCVLKCLKDHKLDPVKFLPGWKIHEMIKNLEKDIAELEKRMEDKVSMKRK 434

Query: 123 TDEASTQKYLSQEIKRSRMAASKGGFPVMSYPVNGLLEQKAATFLEDKSCFSSSSSSMPQ 182
           TDE  TQKY SQEIKRSRMA S+GGFP MS+PVNGLLEQ AA +LED + F SSSS+MPQ
Sbjct: 435 TDEVCTQKYQSQEIKRSRMAVSQGGFPTMSFPVNGLLEQNAAAYLEDNTAF-SSSSTMPQ 494

Query: 183 KLLDGGRAAQLGTYQIASSLRGPGLVETKVLPSDIGSTISISNAASFPRGMGMGMGRDSN 242
           KLLDGGRAA L  YQIASSLR PGLVE  VLP++I S   IS A SFPRGMGMG GRD+N
Sbjct: 495 KLLDGGRAAHLSNYQIASSLRAPGLVENAVLPAEISSI--ISKAGSFPRGMGMGRGRDNN 554

Query: 243 EASIYKMGPTRELAYKDTSVGQSFIQQAMPTITTTPTPTPPPPVESYSAVDGFMGHTTSN 302
            ASIYKMG T ELA+KD S GQSF+QQAMPT+    TPT  PPVESYSA++GF+G  TSN
Sbjct: 555 GASIYKMGSTHELAFKDISGGQSFVQQAMPTL----TPTRTPPVESYSAIEGFVGRKTSN 614

Query: 303 HFDLYHFADAAVFENDAPKSSSTQTGTLSRLRLPPHHHHPPYFY 347
           HFDLYHFADAAVFENDA KS+STQTG L RL+      HPPYFY
Sbjct: 615 HFDLYHFADAAVFENDAAKSNSTQTGALPRLQ------HPPYFY 645

[Close]

BLAST of Lsi01G020250 vs. ExPASy TrEMBL
Match: A0A6J1EYU0 (FRIGIDA-like protein OS=Cucurbita moschata OX=3662 GN=LOC111439873 PE=3 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 1.5e-115
Identity = 243/346 (70.23%), Postives = 257/346 (74.28%), Query Frame = 0


Query: 3   DIIKGMMKNSKNVEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLR 62
           DIIKGM+K S NVEAVDIIYAFG+EDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLR
Sbjct: 360 DIIKGMVKKSMNVEAVDIIYAFGLEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLR 419

Query: 63  RVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELGKRMEDNASMKRK 122
           RVSEEKL SLKCVLKCLEDHKLDPVKSLPGW+IHEMIKNLE DIVELGKRMEDNASMKRK
Sbjct: 420 RVSEEKLGSLKCVLKCLEDHKLDPVKSLPGWEIHEMIKNLENDIVELGKRMEDNASMKRK 479

Query: 123 TDEASTQKYLSQEIKRSRMAASKGGFPVMSY-PVNGLLEQKAATFLEDKSCFSSSSSSMP 182
           TDEASTQKY SQE KRSR   SKGGFPV SY PVNGLLEQ AA                 
Sbjct: 480 TDEASTQKYPSQETKRSRTVESKGGFPVTSYPPVNGLLEQNAAA---------------- 539

Query: 183 QKLLDGGRAAQLGTYQIASSLRGPGLVETKVLPSDIGSTISISNAASFPRGMGMGMGRDS 242
             L DG    Q G YQ++SSLRG  LVET VLP+D+   ISISNA           G DS
Sbjct: 540 -TLFDGAGVDQFGNYQMSSSLRGSSLVETAVLPADM--DISISNA-----------GMDS 599

Query: 243 NEASIYKMGPTRELAYKDTSVGQSFIQQAMPTITTTPTPTPPPPVESYSAVDGFMGHTTS 302
           +     +MG TRELA+KD SVGQSFIQQ MPT T T TPTPPPPV S+SAV+G       
Sbjct: 600 SN----EMGQTRELAFKDVSVGQSFIQQPMPT-TLTTTPTPPPPVVSHSAVEG------- 659

Query: 303 NHFDLYHFADAAVFENDAPKSSSTQTGTLSRLRLPPHHHHPPYFYN 348
              DLYHF DA V END PKSSST+T TL  +RL   H HPPYFYN
Sbjct: 660 GFVDLYHFGDAVVLENDVPKSSSTETSTLPHVRL-SSHPHPPYFYN 662

[Close]

BLAST of Lsi01G020250 vs. NCBI nr
Match: XP_008449489.1 (PREDICTED: protein FRIGIDA [Cucumis melo])

HSP 1 Score: 590.9 bits (1522), Expect = 7.2e-165
Identity = 308/345 (89.28%), Postives = 325/345 (94.20%), Query Frame = 0


Query: 3   DIIKGMMKNSKNVEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLR 62
           DIIKGM K+SKN+EAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLR
Sbjct: 342 DIIKGMTKSSKNIEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLR 401

Query: 63  RVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELGKRMEDNASMKRK 122
           RVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVEL KRMEDNAS+KRK
Sbjct: 402 RVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELRKRMEDNASLKRK 461

Query: 123 TDEASTQKYLSQEIKRSRMAASKGGFPVMSYPVNGLLEQKAATFLEDKSCFSSSSSSMPQ 182
           TDEASTQKYLSQEIKRSR+ ASKGGFPVMSYPVNGLLEQ AATFLEDKSCFS+SSSSMPQ
Sbjct: 462 TDEASTQKYLSQEIKRSRL-ASKGGFPVMSYPVNGLLEQNAATFLEDKSCFSTSSSSMPQ 521

Query: 183 KLLDGGRAAQLGTYQIASSLRGPGLVETKVLPSDIGSTISISNAASFPRGMGMGMGRDSN 242
           KLLDGGRA+QLG YQIASSLRGPGL+ET VLP+DIGS I+ + AASFPR  GMG GRDSN
Sbjct: 522 KLLDGGRASQLGNYQIASSLRGPGLLETTVLPADIGSGIT-NAAASFPR--GMGRGRDSN 581

Query: 243 EASIYKMGPTRELAYKDTSVGQSFIQQAMPTITTTPTPTPPPPVESYSAVDGFMGHTTSN 302
           EASIYKMGPTRELAYKD SVGQSFIQQAMPT+ TTPTP PP  VE YSAVDGFMGH+TSN
Sbjct: 582 EASIYKMGPTRELAYKDISVGQSFIQQAMPTLATTPTP-PPTTVEPYSAVDGFMGHSTSN 641

Query: 303 HFDLYHFADAAVFENDAPKSSSTQTGTLSRLRLPPHHHHPPYFYN 348
           +FDLYHFADAAVFEND PK+S++QTGTLSRLRL PH+HHPPYFYN
Sbjct: 642 NFDLYHFADAAVFENDLPKNSTSQTGTLSRLRL-PHNHHPPYFYN 680

[Close]

BLAST of Lsi01G020250 vs. NCBI nr
Match: XP_004144340.1 (protein FRIGIDA [Cucumis sativus] >KGN54733.1 hypothetical protein Csa_012637 [Cucumis sativus])

HSP 1 Score: 589.3 bits (1518), Expect = 2.1e-164
Identity = 306/346 (88.44%), Postives = 321/346 (92.77%), Query Frame = 0


Query: 3   DIIKGMMKNSKNVEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLR 62
           DIIKGM K+SKN+EAVDIIYAFGME+VFPPQEILLSFLQECDETWKKRIN+VRGSTMQLR
Sbjct: 270 DIIKGMTKSSKNIEAVDIIYAFGMENVFPPQEILLSFLQECDETWKKRINKVRGSTMQLR 329

Query: 63  RVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELGKRMEDNASMKRK 122
           RVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELGKRMEDNAS+KRK
Sbjct: 330 RVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELGKRMEDNASLKRK 389

Query: 123 TDEASTQKYLSQEIKRSRMAASKGGFPVMSYPVNGLLEQKAATFLEDKSCFSSSSSSMPQ 182
           TDEASTQKYLSQEIKRSRM+A+KGGFPVMSYPVNGLLEQ A TFLEDKSCFS+SSSSMP 
Sbjct: 390 TDEASTQKYLSQEIKRSRMSANKGGFPVMSYPVNGLLEQNATTFLEDKSCFSTSSSSMPL 449

Query: 183 KLLDGGRAAQLGTYQIASSLRGPGLVETKVLPSD-IGSTISISNAASFPRGMGMGMGRDS 242
           KLLDGGRA+QLG YQIASSLRGPGLVET VLP+D IGS IS + AA FPRGMG G GRDS
Sbjct: 450 KLLDGGRASQLGNYQIASSLRGPGLVETTVLPADIIGSGIS-NAAAPFPRGMGWGRGRDS 509

Query: 243 NEASIYKMGPTRELAYKDTSVGQSFIQQAMPTITTTPTPTPPPPVESYSAVDGFMGHTTS 302
           NEASIYKMGPTRE AYKD SVGQSFIQQAMPT+ TTPTP PP  VE YSAV GFMGH+TS
Sbjct: 510 NEASIYKMGPTREFAYKDISVGQSFIQQAMPTLATTPTP-PPTTVEPYSAVYGFMGHSTS 569

Query: 303 NHFDLYHFADAAVFENDAPKSSSTQTGTLSRLRLPPHHHHPPYFYN 348
           N+FDLYHFADAAVFEND PK+ STQTGTLSRLRL PHHHHP YFYN
Sbjct: 570 NNFDLYHFADAAVFENDLPKNRSTQTGTLSRLRL-PHHHHPSYFYN 612

[Close]

BLAST of Lsi01G020250 vs. NCBI nr
Match: KAA0062451.1 (protein FRIGIDA [Cucumis melo var. makuwa] >TYK27432.1 protein FRIGIDA [Cucumis melo var. makuwa])

HSP 1 Score: 587.0 bits (1512), Expect = 1.0e-163
Identity = 307/345 (88.99%), Postives = 324/345 (93.91%), Query Frame = 0


Query: 3   DIIKGMMKNSKNVEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLR 62
           DIIKGM K+SKN+EAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLR
Sbjct: 342 DIIKGMTKSSKNIEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLR 401

Query: 63  RVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELGKRMEDNASMKRK 122
           RVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVEL KRMEDNAS+KRK
Sbjct: 402 RVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELRKRMEDNASLKRK 461

Query: 123 TDEASTQKYLSQEIKRSRMAASKGGFPVMSYPVNGLLEQKAATFLEDKSCFSSSSSSMPQ 182
           TDEASTQKYLSQEIKRSR+ ASKGGFPVMSYPVNGLLEQ AATFLEDKSCFS+SSSSMPQ
Sbjct: 462 TDEASTQKYLSQEIKRSRL-ASKGGFPVMSYPVNGLLEQNAATFLEDKSCFSTSSSSMPQ 521

Query: 183 KLLDGGRAAQLGTYQIASSLRGPGLVETKVLPSDIGSTISISNAASFPRGMGMGMGRDSN 242
           KLLDGGRA+QLG YQIASSLRGPGL+ET VLP+DIGS I+ + AASF R  GMG GRDSN
Sbjct: 522 KLLDGGRASQLGNYQIASSLRGPGLLETTVLPADIGSGIT-NAAASFLR--GMGRGRDSN 581

Query: 243 EASIYKMGPTRELAYKDTSVGQSFIQQAMPTITTTPTPTPPPPVESYSAVDGFMGHTTSN 302
           EASIYKMGPTRELAYKD SVGQSFIQQAMPT+ TTPTP PP  VE YSAVDGFMGH+TSN
Sbjct: 582 EASIYKMGPTRELAYKDISVGQSFIQQAMPTLATTPTP-PPTTVEPYSAVDGFMGHSTSN 641

Query: 303 HFDLYHFADAAVFENDAPKSSSTQTGTLSRLRLPPHHHHPPYFYN 348
           +FDLYHFADAAVFEND PK+S++QTGTLSRLRL PH+HHPPYFYN
Sbjct: 642 NFDLYHFADAAVFENDLPKNSTSQTGTLSRLRL-PHNHHPPYFYN 680

[Close]

BLAST of Lsi01G020250 vs. NCBI nr
Match: XP_038890349.1 (protein FRIGIDA [Benincasa hispida])

HSP 1 Score: 580.1 bits (1494), Expect = 1.3e-161
Identity = 308/348 (88.51%), Postives = 322/348 (92.53%), Query Frame = 0


Query: 3   DIIKGMMKNSKNVEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLR 62
           DIIKGMM +SKNVEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQL+
Sbjct: 325 DIIKGMMNSSKNVEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLK 384

Query: 63  RVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELGKRMEDNASMKRK 122
           RVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELGKRMEDNASMKRK
Sbjct: 385 RVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELGKRMEDNASMKRK 444

Query: 123 TDEASTQKYLSQEIKR-SRMAASKGGFPVMSYPVNGLLEQKAATFLEDKSCFSSSSSSMP 182
            DEASTQKYLSQEIKR  R+AASKGGFP MSYPVNGLLEQ AATFLEDKSCFSS SSS+P
Sbjct: 445 IDEASTQKYLSQEIKRLRRVAASKGGFPDMSYPVNGLLEQNAATFLEDKSCFSSGSSSIP 504

Query: 183 QKLLDGGRAAQLGTYQIASSLRGPGLVETKVLPSDIGSTISISNAASFPRGMGMGMGRDS 242
           QK+L+GGR+A+LG YQ A SLRGPGLVET VLP+DIGS+IS S AASFPR  G+  GRDS
Sbjct: 505 QKILEGGRSARLGNYQTALSLRGPGLVETTVLPADIGSSIS-SAAASFPR--GIAKGRDS 564

Query: 243 NEASIY-KMGPTREL-AYKDTSVGQSFIQQAMPTITTTPTPTPPPPVESYSAVDGFMGHT 302
            EASIY KMGPTREL AYKD SVGQSFIQQAMPT+ TTPTP PPP VESYSAVDGFMGHT
Sbjct: 565 IEASIYNKMGPTRELAAYKDISVGQSFIQQAMPTLKTTPTP-PPPTVESYSAVDGFMGHT 624

Query: 303 TSNHFDLYHFADAAVFENDAPKSSSTQTGTLSRLRLPPHHHHPPYFYN 348
           TSNHFDLYHFAD+AVF+NDAPKSSSTQTG LSRLRL PHHHHPPYFYN
Sbjct: 625 TSNHFDLYHFADSAVFDNDAPKSSSTQTGNLSRLRL-PHHHHPPYFYN 667

[Close]

BLAST of Lsi01G020250 vs. NCBI nr
Match: XP_022158380.1 (protein FRIGIDA [Momordica charantia])

HSP 1 Score: 510.0 bits (1312), Expect = 1.6e-140
Identity = 267/344 (77.62%), Postives = 289/344 (84.01%), Query Frame = 0


Query: 3   DIIKGMMKNSKNVEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQLR 62
           DIIKGM K S NVEAVDI+YAFG+ED F PQEILLSFLQECDETWK++INEVRGSTMQLR
Sbjct: 315 DIIKGMTKKSMNVEAVDIVYAFGLEDSFSPQEILLSFLQECDETWKRKINEVRGSTMQLR 374

Query: 63  RVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELGKRMEDNASMKRK 122
           RV+EEKLASLKCVLKCL+DHKLDPVK LPGWKIHEMIKNLEKDI EL KRMED  SMKRK
Sbjct: 375 RVNEEKLASLKCVLKCLKDHKLDPVKFLPGWKIHEMIKNLEKDIAELEKRMEDKVSMKRK 434

Query: 123 TDEASTQKYLSQEIKRSRMAASKGGFPVMSYPVNGLLEQKAATFLEDKSCFSSSSSSMPQ 182
           TDE  TQKY SQEIKRSRMA S+GGFP MS+PVNGLLEQ AA +LED + F SSSS+MPQ
Sbjct: 435 TDEVCTQKYQSQEIKRSRMAVSQGGFPTMSFPVNGLLEQNAAAYLEDNTAF-SSSSTMPQ 494

Query: 183 KLLDGGRAAQLGTYQIASSLRGPGLVETKVLPSDIGSTISISNAASFPRGMGMGMGRDSN 242
           KLLDGGRAA L  YQIASSLR PGLVE  VLP++I S   IS A SFPRGMGMG GRD+N
Sbjct: 495 KLLDGGRAAHLSNYQIASSLRAPGLVENAVLPAEISSI--ISKAGSFPRGMGMGRGRDNN 554

Query: 243 EASIYKMGPTRELAYKDTSVGQSFIQQAMPTITTTPTPTPPPPVESYSAVDGFMGHTTSN 302
            ASIYKMG T ELA+KD S GQSF+QQAMPT+    TPT  PPVESYSA++GF+G  TSN
Sbjct: 555 GASIYKMGSTHELAFKDISGGQSFVQQAMPTL----TPTRTPPVESYSAIEGFVGRKTSN 614

Query: 303 HFDLYHFADAAVFENDAPKSSSTQTGTLSRLRLPPHHHHPPYFY 347
           HFDLYHFADAAVFENDA KS+STQTG L RL+      HPPYFY
Sbjct: 615 HFDLYHFADAAVFENDAAKSNSTQTGALPRLQ------HPPYFY 645

[Close]

BLAST of Lsi01G020250 vs. TAIR 10
Match: AT3G22440.1 (FRIGIDA-like protein )

HSP 1 Score: 53.5 bits (127), Expect = 3.9e-07
Identity = 29/111 (26.13%), Postives = 60/111 (54.05%), Query Frame = 0


Query: 1   MKDIIKGMMKNSKNVEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQ 60
           M D+I+ ++   + ++AV   Y  G+ D FPP  +L ++L++  ++    + +   +   
Sbjct: 303 MPDMIEELISRGQQLDAVHFTYEVGLVDKFPPVPLLKAYLRDAKKSAASIMEDSSNTGRA 362

Query: 61  LRRVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELGK 112
              V+ ++ ++LK VLKC+E++KL+  +  P   + + +  LEK   E  K
Sbjct: 363 THLVARKEQSALKAVLKCIEEYKLE--EEFPPENLKKRLDQLEKTKTEKRK 411

[Close]

BLAST of Lsi01G020250 vs. TAIR 10
Match: AT5G48385.1 (FRIGIDA-like protein )

HSP 1 Score: 49.3 bits (116), Expect = 7.3e-06
Identity = 30/104 (28.85%), Postives = 55/104 (52.88%), Query Frame = 0


Query: 1   MKDIIKGMMKNSKNVEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQ 60
           M  +I+ ++ + K ++AV++ +AF + + F P  +L S+L E   +   +      S   
Sbjct: 353 MPGVIEVLVNSGKQIDAVNLAFAFELTEQFSPVSLLKSYLIEARRS-SPQGRPGNASPAV 412

Query: 61  LRRVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEK 105
               +E +L  LK V+KC+E+H L+  +  P   +H+ I  LEK
Sbjct: 413 QDEFNERELIGLKTVIKCIEEHSLE--EQYPVEPLHKRILQLEK 453

[Close]

BLAST of Lsi01G020250 vs. TAIR 10
Match: AT4G14900.1 (FRIGIDA-like protein )

HSP 1 Score: 48.9 bits (115), Expect = 9.5e-06
Identity = 27/111 (24.32%), Postives = 59/111 (53.15%), Query Frame = 0


Query: 1   MKDIIKGMMKNSKNVEAVDIIYAFGMEDVFPPQEILLSFLQECDETWKKRINEVRGSTMQ 60
           M D+I+ ++   + ++AV   +  G+  +FPP  +L ++L++  +      ++   S   
Sbjct: 301 MPDMIEELIIRGQQLDAVHFTFEVGLVHLFPPVPLLKAYLRDAKKATALITDDSNNSGRS 360

Query: 61  LRRVSEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELGK 112
              V+ ++ ++L+ VLKC+E++KL+  +  P   + + +  LEK   E  K
Sbjct: 361 AHLVARKEQSALRAVLKCIEEYKLE--EEFPPENLKKRLDQLEKTKTEKRK 409

The following BLAST results are available for this feature:

BLAST of Lsi01G020250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0DH90	3.0e-20	37.86	Protein FRIGIDA OS=Arabidopsis thaliana OX=3702 GN=FRI PE=1 SV=1	[more]
Q9LUV4	5.4e-06	26.13	FRIGIDA-like protein 4a OS=Arabidopsis thaliana OX=3702 GN=FRL4A PE=2 SV=1	[more]
Q67ZB3	1.0e-04	28.85	FRIGIDA-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=FRL3 PE=1 SV=1	[more]
Q940H8	1.3e-04	24.32	FRIGIDA-like protein 4b OS=Arabidopsis thaliana OX=3702 GN=FRL4B PE=1 SV=1	[more]

BLAST of Lsi01G020250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BM50	3.5e-165	89.28	FRIGIDA-like protein OS=Cucumis melo OX=3656 GN=LOC103491359 PE=3 SV=1	[more]
A0A0A0KYX9	1.0e-164	88.44	FRIGIDA-like protein OS=Cucumis sativus OX=3659 GN=Csa_4G437530 PE=3 SV=1	[more]
A0A5D3DV89	5.1e-164	88.99	FRIGIDA-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325...	[more]
A0A6J1DVP1	7.8e-141	77.62	FRIGIDA-like protein OS=Momordica charantia OX=3673 GN=LOC111024877 PE=3 SV=1	[more]
A0A6J1EYU0	1.5e-115	70.23	FRIGIDA-like protein OS=Cucurbita moschata OX=3662 GN=LOC111439873 PE=3 SV=1	[more]

BLAST of Lsi01G020250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449489.1	7.2e-165	89.28	PREDICTED: protein FRIGIDA [Cucumis melo]	[more]
XP_004144340.1	2.1e-164	88.44	protein FRIGIDA [Cucumis sativus] >KGN54733.1 hypothetical protein Csa_012637 [C...	[more]
KAA0062451.1	1.0e-163	88.99	protein FRIGIDA [Cucumis melo var. makuwa] >TYK27432.1 protein FRIGIDA [Cucumis ...	[more]
XP_038890349.1	1.3e-161	88.51	protein FRIGIDA [Benincasa hispida]	[more]
XP_022158380.1	1.6e-140	77.62	protein FRIGIDA [Momordica charantia]	[more]

BLAST of Lsi01G020250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22440.1	3.9e-07	26.13	FRIGIDA-like protein	[more]
AT5G48385.1	7.3e-06	28.85	FRIGIDA-like protein	[more]
AT4G14900.1	9.5e-06	24.32	FRIGIDA-like protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012474	Frigida-like	PFAM	PF07899	Frigida	coord: 1..110 e-value: 2.1E-27 score: 96.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 319..347
None	No IPR available	PANTHER	PTHR31791	FRIGIDA-LIKE PROTEIN 3-RELATED	coord: 1..183
None	No IPR available	PANTHER	PTHR31791:SF49	INACTIVE PROTEIN FRIGIDA	coord: 1..183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G020250.1	Lsi01G020250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030154	cell differentiation
biological_process	GO:0009908	flower development