Lsi01G020150 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi01G020150
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Descriptionalcohol dehydrogenase
Locationchr01: 27537594 .. 27538723 (+)
RNA-Seq ExpressionLsi01G020150
SyntenyLsi01G020150
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGAAATAAGAAATTTAAAAATGAAAGCTCCGCTTAGTTTGGCGTCAACGCCGATCTTAAAATATAGAAATCCAACTCAACAAACCATCATGCTCATCCCAATCCTTCCATCCATCCATCTCTCTCTCTCCGGATTCCAACAATGGCGTTTTCTCCCTTCATCCGAAGAGCCATTTCCACTGCACTCTTCTCTCAATCCCATCTTCTTCGATCTCCCTCAACCTTCCATCATTCAATTACACGCATCCATCACTCCCCTGCTTCTTCTTCCTCTTCTTCTTCATATTCTTCCTTGCCCTCATACATGCGTGCTGCTGTGTTTTCCGAGCCCAATAAGCCACTTACCATTCAAGAATTCCACATGCCCCGTCCCAAAGCTGGAGAAGTCCTCATCAAAATCAAAGGTTTTCCCCCCCTTTTCATCCCTTTTATTGTTTCTCTTTGTAATTATGCTTTTATGGGAATTTGATACTCTGAATCGCGAATCACTTCTTCATAATTTGTGTTTCCCATTTTGGTTTTTGTTGTAATTTAGACATTTTCTTCTGCATGTGATCGTGGGAGTGATACTTTTTTTTGTTTACTCTTCAACTTCCACTTACTTTTTCTTCAATGCCATTACGTTTTCAAATGCAGCTTGTGGAGTTTGCCATTCTGATCTGCACGTTATGAAGGGCGAGATTCCATTCCCTATCCCTTGTGTAGTCGGGCATGAGATCACTGGTGAAGTTGTCGAACATGGACCTCTCACAGACAGGAAAACAATAGAAAGGTTTTGTTCTCGTGATGATTTTAAATATAGTTATTATTTAGATGTGACTTTGCAGTGAAATGAAATATTTCAACCTGTTGCTCATTGTAGGTAATTTAAGATAGTTAAGCAAGCTTTTGGTTATATGCTATAAATAAGGGAAATAACGAACAAACTTATTTGTGCAAGGATGGTTGAATAAAAAGGGAGTTACAGGTTTATTAGTTACGTTTTCTGCTTTTTCAGACTTCCAATTGGAGCTCATGTTGTAGGAGCTTTCATCATGCCTTGTGGAAACTGTTCCTACTGTTCAAAGGTTAGTACTATTTTCATGCTCGTGCTTCTCTTCAGTTTATCTATTATAATCCTTCAATCCTGA

mRNA sequence

GTGAAATAAGAAATTTAAAAATGAAAGCTCCGCTTAGTTTGGCGTCAACGCCGATCTTAAAATATAGAAATCCAACTCAACAAACCATCATGCTCATCCCAATCCTTCCATCCATCCATCTCTCTCTCTCCGGATTCCAACAATGGCGTTTTCTCCCTTCATCCGAAGAGCCATTTCCACTGCACTCTTCTCTCAATCCCATCTTCTTCGATCTCCCTCAACCTTCCATCATTCAATTACACGCATCCATCACTCCCCTGCTTCTTCTTCCTCTTCTTCTTCATATTCTTCCTTGCCCTCATACATGCGTGCTGCTGTGTTTTCCGAGCCCAATAAGCCACTTACCATTCAAGAATTCCACATGCCCCGTCCCAAAGCTGGAGAAGTCCTCATCAAAATCAAAGCTTGTGGAGTTTGCCATTCTGATCTGCACGTTATGAAGGGCGAGATTCCATTCCCTATCCCTTGTGTAGTCGGGCATGAGATCACTGGTGAAGTTGTCGAACATGGACCTCTCACAGACAGGAAAACAATAGAAAGACTTCCAATTGGAGCTCATGTTGTAGGAGCTTTCATCATGCCTTGTGGAAACTGTTCCTACTGTTCAAAGGTTAGTACTATTTTCATGCTCGTGCTTCTCTTCAGTTTATCTATTATAATCCTTCAATCCTGA

Coding sequence (CDS)

ATGGCGTTTTCTCCCTTCATCCGAAGAGCCATTTCCACTGCACTCTTCTCTCAATCCCATCTTCTTCGATCTCCCTCAACCTTCCATCATTCAATTACACGCATCCATCACTCCCCTGCTTCTTCTTCCTCTTCTTCTTCATATTCTTCCTTGCCCTCATACATGCGTGCTGCTGTGTTTTCCGAGCCCAATAAGCCACTTACCATTCAAGAATTCCACATGCCCCGTCCCAAAGCTGGAGAAGTCCTCATCAAAATCAAAGCTTGTGGAGTTTGCCATTCTGATCTGCACGTTATGAAGGGCGAGATTCCATTCCCTATCCCTTGTGTAGTCGGGCATGAGATCACTGGTGAAGTTGTCGAACATGGACCTCTCACAGACAGGAAAACAATAGAAAGACTTCCAATTGGAGCTCATGTTGTAGGAGCTTTCATCATGCCTTGTGGAAACTGTTCCTACTGTTCAAAGGTTAGTACTATTTTCATGCTCGTGCTTCTCTTCAGTTTATCTATTATAATCCTTCAATCCTGA

Protein sequence

MAFSPFIRRAISTALFSQSHLLRSPSTFHHSITRIHHSPASSSSSSSYSSLPSYMRAAVFSEPNKPLTIQEFHMPRPKAGEVLIKIKACGVCHSDLHVMKGEIPFPIPCVVGHEITGEVVEHGPLTDRKTIERLPIGAHVVGAFIMPCGNCSYCSKVSTIFMLVLLFSLSIIILQS
Homology
[Close]
BLAST of Lsi01G020150 vs. ExPASy Swiss-Prot
Match: A4YGN0 (Succinate-semialdehyde dehydrogenase (acetylating) OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348 / JCM 9185 / NBRC 15509 / TH2) OX=399549 GN=Msed_1424 PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.4e-20
Identity = 48/100 (48.00%), Postives = 66/100 (66.00%), Query Frame = 0 

Query: 55  MRAAVFSEPNKPLTIQEFHMPRPKAGEVLIKIKACGVCHSDLHVMKGEIPFPIPCVVGHE 114
           M+AAV     +PL+I++ ++ +PKAGEV IK+KA G+CHSD++V +G+ P P P V GHE
Sbjct: 1   MKAAVLHTYKEPLSIEDVNISQPKAGEVKIKVKATGLCHSDVNVFEGKTPVPPPVVAGHE 60

Query: 115 ITGEVVEHGPLTDRKTIERLPIGAHVVGAFIMPCGNCSYC 155
           I+G V E GP      + R+  G  V+ AFI PCG C  C
Sbjct: 61  ISGIVEEVGP-----GVTRVKPGDRVISAFIHPCGKCGNC 95

[Close]
BLAST of Lsi01G020150 vs. ExPASy Swiss-Prot
Match: P9WQB8 (Putative alcohol dehydrogenase D OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=adhD PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.1e-15
Identity = 43/98 (43.88%), Postives = 55/98 (56.12%), Query Frame = 0 

Query: 57  AAVFSEPNKPLTIQEFHMPRPKAGEVLIKIKACGVCHSDLHVMKGEIPFPIPCVVGHEIT 116
           AAV  E  KP  + E  +  P  GEVL+K  A G+CHSDLH+  G++P   P V GHE +
Sbjct: 5   AAVLFEAGKPFELMELDLDGPGPGEVLVKYTAAGLCHSDLHLTDGDLPPRFPIVGGHEGS 64

Query: 117 GEVVEHGPLTDRKTIERLPIGAHVVGAFIMPCGNCSYC 155
           G + E G       + R+  G HVV +FI  CG C YC
Sbjct: 65  GVIEEVG-----AGVTRVKPGDHVVCSFIPNCGTCRYC 97

[Close]
BLAST of Lsi01G020150 vs. ExPASy Swiss-Prot
Match: P9WQB9 (Putative alcohol dehydrogenase D OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=adhD PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.1e-15
Identity = 43/98 (43.88%), Postives = 55/98 (56.12%), Query Frame = 0 

Query: 57  AAVFSEPNKPLTIQEFHMPRPKAGEVLIKIKACGVCHSDLHVMKGEIPFPIPCVVGHEIT 116
           AAV  E  KP  + E  +  P  GEVL+K  A G+CHSDLH+  G++P   P V GHE +
Sbjct: 5   AAVLFEAGKPFELMELDLDGPGPGEVLVKYTAAGLCHSDLHLTDGDLPPRFPIVGGHEGS 64

Query: 117 GEVVEHGPLTDRKTIERLPIGAHVVGAFIMPCGNCSYC 155
           G + E G       + R+  G HVV +FI  CG C YC
Sbjct: 65  GVIEEVG-----AGVTRVKPGDHVVCSFIPNCGTCRYC 97

[Close]
BLAST of Lsi01G020150 vs. ExPASy Swiss-Prot
Match: P80175 (NDMA-dependent alcohol dehydrogenase OS=Amycolatopsis methanolica OX=1814 PE=1 SV=2)

HSP 1 Score: 83.6 bits (205), Expect = 2.5e-15
Identity = 41/100 (41.00%), Postives = 57/100 (57.00%), Query Frame = 0 

Query: 56  RAAVFSEPNKPLTIQEFHMPRPKAGEVLIKIKACGVCHSDLHVMKGEIPFPIPCVVGHEI 115
           +AAV     KP  I+E  +  P+ GEVLIK  A G+CHSDLH++  ++    P V GHE 
Sbjct: 4   KAAVLHSAGKPFEIEELELDGPREGEVLIKYTAAGLCHSDLHLIDNDLVPRFPIVGGHEG 63

Query: 116 TGEVVEHGPLTDRKTIERLPIGAHVVGAFIMPCGNCSYCS 156
            G + + GP      + ++  G HVV +FI  CG C YC+
Sbjct: 64  AGVIEDVGP-----GVTKVKPGDHVVCSFIPNCGTCRYCA 98

[Close]
BLAST of Lsi01G020150 vs. ExPASy Swiss-Prot
Match: P12311 (Alcohol dehydrogenase OS=Geobacillus stearothermophilus OX=1422 GN=adhT PE=1 SV=2)

HSP 1 Score: 81.3 bits (199), Expect = 1.2e-14
Identity = 42/103 (40.78%), Postives = 58/103 (56.31%), Query Frame = 0 

Query: 55  MRAAVFSEPNKPLTIQEFHMPRPKAGEVLIKIKACGVCHSDLHVMKGEIPF--PIPCVVG 114
           M+AAV  +  KPL ++E   P+   GEVL++IKACGVCH+DLH   G+ P    +P + G
Sbjct: 1   MKAAVVEQFKKPLQVKEVEKPKISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPG 60

Query: 115 HEITGEVVEHGPLTDRKTIERLPIGAHV-VGAFIMPCGNCSYC 155
           HE  G + E GP      +  L +G  V +      CG+C YC
Sbjct: 61  HEGVGVIEEVGP-----GVTHLKVGDRVGIPWLYSACGHCDYC 98

[Close]
BLAST of Lsi01G020150 vs. ExPASy TrEMBL
Match: A0A0A0L305 (Oxidoreductase OS=Cucumis sativus OX=3659 GN=Csa_4G337920 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.6e-73
Identity = 143/158 (90.51%), Postives = 148/158 (93.67%), Query Frame = 0 

Query: 1   MAFSPFIRRAISTALFS--QSHLLRSPSTFHHSITRIHHSPASSSSSSSYSSLPSYMRAA 60
           MAFSPFIRRAIS+ LFS  +S+LLRSPSTFHH+ TRI+HSP     SSSYSSLPSYMRAA
Sbjct: 1   MAFSPFIRRAISSKLFSVHKSYLLRSPSTFHHAPTRINHSP-----SSSYSSLPSYMRAA 60

Query: 61  VFSEPNKPLTIQEFHMPRPKAGEVLIKIKACGVCHSDLHVMKGEIPFPIPCVVGHEITGE 120
           VFSEPNKPLTIQEFHMPRPKAGEVLIKIKACGVCHSDLHVMKGEIPFP PCVVGHEITGE
Sbjct: 61  VFSEPNKPLTIQEFHMPRPKAGEVLIKIKACGVCHSDLHVMKGEIPFPSPCVVGHEITGE 120

Query: 121 VVEHGPLTDRKTIERLPIGAHVVGAFIMPCGNCSYCSK 157
           VVEHGPLTDRKTIERLPIGAHVVGAFIMPCGNCSYCSK
Sbjct: 121 VVEHGPLTDRKTIERLPIGAHVVGAFIMPCGNCSYCSK 153

[Close]
BLAST of Lsi01G020150 vs. ExPASy TrEMBL
Match: A0A5A7V7N1 (Alcohol dehydrogenase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G001550 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 1.0e-72
Identity = 140/158 (88.61%), Postives = 146/158 (92.41%), Query Frame = 0 

Query: 1   MAFSPFIRRAISTALFS--QSHLLRSPSTFHHSITRIHHSPASSSSSSSYSSLPSYMRAA 60
           M F PFIRRAIS+  FS  +SHLLRSPSTFHH++TRI+HSP     SSSYSSLPSYMRAA
Sbjct: 1   MTFYPFIRRAISSKFFSVHKSHLLRSPSTFHHALTRINHSP-----SSSYSSLPSYMRAA 60

Query: 61  VFSEPNKPLTIQEFHMPRPKAGEVLIKIKACGVCHSDLHVMKGEIPFPIPCVVGHEITGE 120
           VFSEPNKPLTIQEFHMPRPKAGEVLIKIKACGVCHSDLHV+KGEIPFP PCVVGHEITGE
Sbjct: 61  VFSEPNKPLTIQEFHMPRPKAGEVLIKIKACGVCHSDLHVIKGEIPFPSPCVVGHEITGE 120

Query: 121 VVEHGPLTDRKTIERLPIGAHVVGAFIMPCGNCSYCSK 157
           VVEHGPLTDRKTIERLPIGAHVVGAFIMPCGNCSYCSK
Sbjct: 121 VVEHGPLTDRKTIERLPIGAHVVGAFIMPCGNCSYCSK 153

[Close]
BLAST of Lsi01G020150 vs. ExPASy TrEMBL
Match: A0A1S3BLX2 (alcohol dehydrogenase OS=Cucumis melo OX=3656 GN=LOC103491279 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 1.0e-72
Identity = 140/158 (88.61%), Postives = 146/158 (92.41%), Query Frame = 0 

Query: 1   MAFSPFIRRAISTALFS--QSHLLRSPSTFHHSITRIHHSPASSSSSSSYSSLPSYMRAA 60
           M F PFIRRAIS+  FS  +SHLLRSPSTFHH++TRI+HSP     SSSYSSLPSYMRAA
Sbjct: 1   MTFYPFIRRAISSKFFSVHKSHLLRSPSTFHHALTRINHSP-----SSSYSSLPSYMRAA 60

Query: 61  VFSEPNKPLTIQEFHMPRPKAGEVLIKIKACGVCHSDLHVMKGEIPFPIPCVVGHEITGE 120
           VFSEPNKPLTIQEFHMPRPKAGEVLIKIKACGVCHSDLHV+KGEIPFP PCVVGHEITGE
Sbjct: 61  VFSEPNKPLTIQEFHMPRPKAGEVLIKIKACGVCHSDLHVIKGEIPFPSPCVVGHEITGE 120

Query: 121 VVEHGPLTDRKTIERLPIGAHVVGAFIMPCGNCSYCSK 157
           VVEHGPLTDRKTIERLPIGAHVVGAFIMPCGNCSYCSK
Sbjct: 121 VVEHGPLTDRKTIERLPIGAHVVGAFIMPCGNCSYCSK 153

[Close]
BLAST of Lsi01G020150 vs. ExPASy TrEMBL
Match: A0A6J1E0R2 (alcohol dehydrogenase 1B OS=Momordica charantia OX=3673 GN=LOC111024875 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 5.7e-63
Identity = 133/173 (76.88%), Postives = 137/173 (79.19%), Query Frame = 0 

Query: 1   MAFSPFIRRAISTALFSQ-------SHLLRSPSTFHHSIT-----RIHHSPASSSSSSSY 60
           MAFSPFIRR IS  L SQ       SHLL S S FHH +T     RI   PASS S  S 
Sbjct: 1   MAFSPFIRRTISRTLLSQSHFSLPKSHLLPSSSFFHHPLTSDDHKRIDRVPASSHSLHSQ 60

Query: 61  SS-----LPSYMRAAVFSEPNKPLTIQEFHMPRPKAGEVLIKIKACGVCHSDLHVMKGEI 120
            +     LPSYMRAAVF EPNKPLTI+EFHMPRPKAGEVLIK KACGVCHSDLHVMKGEI
Sbjct: 61  GAAPAGDLPSYMRAAVFWEPNKPLTIEEFHMPRPKAGEVLIKTKACGVCHSDLHVMKGEI 120

Query: 121 PFPIPCVVGHEITGEVVEHGPLTDRKTIERLPIGAHVVGAFIMPCGNCSYCSK 157
           PFP PCVVGHEITGEVVEHGPLTDRKTIERLPIGAHVVG+FIMPCGNCSYCSK
Sbjct: 121 PFPSPCVVGHEITGEVVEHGPLTDRKTIERLPIGAHVVGSFIMPCGNCSYCSK 173

[Close]
BLAST of Lsi01G020150 vs. ExPASy TrEMBL
Match: A0A6J1HTG6 (alcohol dehydrogenase 1 OS=Cucurbita maxima OX=3661 GN=LOC111466018 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 8.5e-59
Identity = 122/157 (77.71%), Postives = 129/157 (82.17%), Query Frame = 0 

Query: 1   MAFSPFIRRAISTALFSQSHLLRSPSTFHHSITRIHHSPASSSSS-SSYSSLPSYMRAAV 60
           MAF PFIRRAIS  L SQSH   S S  H        SPASSS S  S   L SYMRAA+
Sbjct: 1   MAFFPFIRRAISAKLLSQSHCSVSKSLLH------RFSPASSSHSFHSRGELASYMRAAM 60

Query: 61  FSEPNKPLTIQEFHMPRPKAGEVLIKIKACGVCHSDLHVMKGEIPFPIPCVVGHEITGEV 120
           F++PNKPLTI+EF+MPRPKAGEVLIK+KACGVCHSDLHVMKGE+PFP PCVVGHEITGEV
Sbjct: 61  FTDPNKPLTIEEFNMPRPKAGEVLIKVKACGVCHSDLHVMKGELPFPSPCVVGHEITGEV 120

Query: 121 VEHGPLTDRKTIERLPIGAHVVGAFIMPCGNCSYCSK 157
           VEHGPLTD KTIERLPIGAHVVGAFIMPCGNCS CSK
Sbjct: 121 VEHGPLTDSKTIERLPIGAHVVGAFIMPCGNCSCCSK 151

[Close]
BLAST of Lsi01G020150 vs. NCBI nr
Match: XP_038903768.1 (alcohol dehydrogenase [Benincasa hispida])

HSP 1 Score: 293.9 bits (751), Expect = 9.3e-76
Identity = 145/156 (92.95%), Postives = 149/156 (95.51%), Query Frame = 0 

Query: 1   MAFSPFIRRAISTALFSQSHLLRSPSTFHHSITRIHHSPASSSSSSSYSSLPSYMRAAVF 60
           MAFSPFIRRAIST    + HLLRS STFHH++TRIHHSPASSSSSSSYSSLPSYMRAAVF
Sbjct: 22  MAFSPFIRRAIST----RFHLLRSSSTFHHALTRIHHSPASSSSSSSYSSLPSYMRAAVF 81

Query: 61  SEPNKPLTIQEFHMPRPKAGEVLIKIKACGVCHSDLHVMKGEIPFPIPCVVGHEITGEVV 120
           SEPNKPLTIQEFHMPRPKAGEVLIKIKACGVCHSDLHVMKGEIPFP PCVVGHEITGEVV
Sbjct: 82  SEPNKPLTIQEFHMPRPKAGEVLIKIKACGVCHSDLHVMKGEIPFPSPCVVGHEITGEVV 141

Query: 121 EHGPLTDRKTIERLPIGAHVVGAFIMPCGNCSYCSK 157
           EHGPLTDRKT+ERLPIGAHVVGAFIMPCGNCSYCSK
Sbjct: 142 EHGPLTDRKTMERLPIGAHVVGAFIMPCGNCSYCSK 173

[Close]
BLAST of Lsi01G020150 vs. NCBI nr
Match: XP_004142661.1 (uncharacterized protein LOC101207246 [Cucumis sativus] >KAE8649602.1 hypothetical protein Csa_012208 [Cucumis sativus])

HSP 1 Score: 285.4 bits (729), Expect = 3.3e-73
Identity = 143/158 (90.51%), Postives = 148/158 (93.67%), Query Frame = 0 

Query: 1   MAFSPFIRRAISTALFS--QSHLLRSPSTFHHSITRIHHSPASSSSSSSYSSLPSYMRAA 60
           MAFSPFIRRAIS+ LFS  +S+LLRSPSTFHH+ TRI+HSP     SSSYSSLPSYMRAA
Sbjct: 1   MAFSPFIRRAISSKLFSVHKSYLLRSPSTFHHAPTRINHSP-----SSSYSSLPSYMRAA 60

Query: 61  VFSEPNKPLTIQEFHMPRPKAGEVLIKIKACGVCHSDLHVMKGEIPFPIPCVVGHEITGE 120
           VFSEPNKPLTIQEFHMPRPKAGEVLIKIKACGVCHSDLHVMKGEIPFP PCVVGHEITGE
Sbjct: 61  VFSEPNKPLTIQEFHMPRPKAGEVLIKIKACGVCHSDLHVMKGEIPFPSPCVVGHEITGE 120

Query: 121 VVEHGPLTDRKTIERLPIGAHVVGAFIMPCGNCSYCSK 157
           VVEHGPLTDRKTIERLPIGAHVVGAFIMPCGNCSYCSK
Sbjct: 121 VVEHGPLTDRKTIERLPIGAHVVGAFIMPCGNCSYCSK 153

[Close]
BLAST of Lsi01G020150 vs. NCBI nr
Match: XP_008449387.1 (PREDICTED: alcohol dehydrogenase [Cucumis melo])

HSP 1 Score: 282.7 bits (722), Expect = 2.1e-72
Identity = 140/158 (88.61%), Postives = 146/158 (92.41%), Query Frame = 0 

Query: 1   MAFSPFIRRAISTALFS--QSHLLRSPSTFHHSITRIHHSPASSSSSSSYSSLPSYMRAA 60
           M F PFIRRAIS+  FS  +SHLLRSPSTFHH++TRI+HSP     SSSYSSLPSYMRAA
Sbjct: 1   MTFYPFIRRAISSKFFSVHKSHLLRSPSTFHHALTRINHSP-----SSSYSSLPSYMRAA 60

Query: 61  VFSEPNKPLTIQEFHMPRPKAGEVLIKIKACGVCHSDLHVMKGEIPFPIPCVVGHEITGE 120
           VFSEPNKPLTIQEFHMPRPKAGEVLIKIKACGVCHSDLHV+KGEIPFP PCVVGHEITGE
Sbjct: 61  VFSEPNKPLTIQEFHMPRPKAGEVLIKIKACGVCHSDLHVIKGEIPFPSPCVVGHEITGE 120

Query: 121 VVEHGPLTDRKTIERLPIGAHVVGAFIMPCGNCSYCSK 157
           VVEHGPLTDRKTIERLPIGAHVVGAFIMPCGNCSYCSK
Sbjct: 121 VVEHGPLTDRKTIERLPIGAHVVGAFIMPCGNCSYCSK 153

[Close]
BLAST of Lsi01G020150 vs. NCBI nr
Match: KAA0062426.1 (alcohol dehydrogenase [Cucumis melo var. makuwa] >TYK27455.1 alcohol dehydrogenase [Cucumis melo var. makuwa])

HSP 1 Score: 282.7 bits (722), Expect = 2.1e-72
Identity = 140/158 (88.61%), Postives = 146/158 (92.41%), Query Frame = 0 

Query: 1   MAFSPFIRRAISTALFS--QSHLLRSPSTFHHSITRIHHSPASSSSSSSYSSLPSYMRAA 60
           M F PFIRRAIS+  FS  +SHLLRSPSTFHH++TRI+HSP     SSSYSSLPSYMRAA
Sbjct: 1   MTFYPFIRRAISSKFFSVHKSHLLRSPSTFHHALTRINHSP-----SSSYSSLPSYMRAA 60

Query: 61  VFSEPNKPLTIQEFHMPRPKAGEVLIKIKACGVCHSDLHVMKGEIPFPIPCVVGHEITGE 120
           VFSEPNKPLTIQEFHMPRPKAGEVLIKIKACGVCHSDLHV+KGEIPFP PCVVGHEITGE
Sbjct: 61  VFSEPNKPLTIQEFHMPRPKAGEVLIKIKACGVCHSDLHVIKGEIPFPSPCVVGHEITGE 120

Query: 121 VVEHGPLTDRKTIERLPIGAHVVGAFIMPCGNCSYCSK 157
           VVEHGPLTDRKTIERLPIGAHVVGAFIMPCGNCSYCSK
Sbjct: 121 VVEHGPLTDRKTIERLPIGAHVVGAFIMPCGNCSYCSK 153

[Close]
BLAST of Lsi01G020150 vs. NCBI nr
Match: XP_022158376.1 (alcohol dehydrogenase 1B [Momordica charantia])

HSP 1 Score: 250.4 bits (638), Expect = 1.2e-62
Identity = 133/173 (76.88%), Postives = 137/173 (79.19%), Query Frame = 0 

Query: 1   MAFSPFIRRAISTALFSQ-------SHLLRSPSTFHHSIT-----RIHHSPASSSSSSSY 60
           MAFSPFIRR IS  L SQ       SHLL S S FHH +T     RI   PASS S  S 
Sbjct: 1   MAFSPFIRRTISRTLLSQSHFSLPKSHLLPSSSFFHHPLTSDDHKRIDRVPASSHSLHSQ 60

Query: 61  SS-----LPSYMRAAVFSEPNKPLTIQEFHMPRPKAGEVLIKIKACGVCHSDLHVMKGEI 120
            +     LPSYMRAAVF EPNKPLTI+EFHMPRPKAGEVLIK KACGVCHSDLHVMKGEI
Sbjct: 61  GAAPAGDLPSYMRAAVFWEPNKPLTIEEFHMPRPKAGEVLIKTKACGVCHSDLHVMKGEI 120

Query: 121 PFPIPCVVGHEITGEVVEHGPLTDRKTIERLPIGAHVVGAFIMPCGNCSYCSK 157
           PFP PCVVGHEITGEVVEHGPLTDRKTIERLPIGAHVVG+FIMPCGNCSYCSK
Sbjct: 121 PFPSPCVVGHEITGEVVEHGPLTDRKTIERLPIGAHVVGSFIMPCGNCSYCSK 173

[Close]
BLAST of Lsi01G020150 vs. TAIR 10
Match: AT5G63620.1 (GroES-like zinc-binding alcohol dehydrogenase family protein )

HSP 1 Score: 193.0 bits (489), Expect = 2.1e-49
Identity = 97/157 (61.78%), Postives = 113/157 (71.97%), Query Frame = 0 

Query: 1   MAFSPFIRRAISTA-LFSQSHLLRSPSTFHHSITRIHHSPASSSSSSSYSSLPSYMRAAV 60
           MAF+P +RRA +   LFS + L    +    S+        S S    + S   +MR AV
Sbjct: 1   MAFAPILRRASAVKNLFSLTRLAVGSALSTRSLQTGASGDDSQSMGGYHVSPGGFMRGAV 60

Query: 61  FSEPNKPLTIQEFHMPRPKAGEVLIKIKACGVCHSDLHVMKGEIPFPIPCVVGHEITGEV 120
           + EPNKPLTI+EFH+PRPK+ E+LIK KACGVCHSDLHVMKGEIPF  PCV+GHEITGEV
Sbjct: 61  YREPNKPLTIEEFHIPRPKSNEILIKTKACGVCHSDLHVMKGEIPFASPCVIGHEITGEV 120

Query: 121 VEHGPLTDRKTIERLPIGAHVVGAFIMPCGNCSYCSK 157
           VEHGPLTD K I R PIG+ VVGAFIMPCG CSYC+K
Sbjct: 121 VEHGPLTDHKIINRFPIGSRVVGAFIMPCGTCSYCAK 157

[Close]
BLAST of Lsi01G020150 vs. TAIR 10
Match: AT5G63620.2 (GroES-like zinc-binding alcohol dehydrogenase family protein )

HSP 1 Score: 193.0 bits (489), Expect = 2.1e-49
Identity = 97/157 (61.78%), Postives = 113/157 (71.97%), Query Frame = 0 

Query: 1   MAFSPFIRRAISTA-LFSQSHLLRSPSTFHHSITRIHHSPASSSSSSSYSSLPSYMRAAV 60
           MAF+P +RRA +   LFS + L    +    S+        S S    + S   +MR AV
Sbjct: 1   MAFAPILRRASAVKNLFSLTRLAVGSALSTRSLQTGASGDDSQSMGGYHVSPGGFMRGAV 60

Query: 61  FSEPNKPLTIQEFHMPRPKAGEVLIKIKACGVCHSDLHVMKGEIPFPIPCVVGHEITGEV 120
           + EPNKPLTI+EFH+PRPK+ E+LIK KACGVCHSDLHVMKGEIPF  PCV+GHEITGEV
Sbjct: 61  YREPNKPLTIEEFHIPRPKSNEILIKTKACGVCHSDLHVMKGEIPFASPCVIGHEITGEV 120

Query: 121 VEHGPLTDRKTIERLPIGAHVVGAFIMPCGNCSYCSK 157
           VEHGPLTD K I R PIG+ VVGAFIMPCG CSYC+K
Sbjct: 121 VEHGPLTDHKIINRFPIGSRVVGAFIMPCGTCSYCAK 157

[Close]
BLAST of Lsi01G020150 vs. TAIR 10
Match: AT5G43940.1 (GroES-like zinc-binding dehydrogenase family protein )

HSP 1 Score: 75.5 bits (184), Expect = 4.8e-14
Identity = 38/105 (36.19%), Postives = 56/105 (53.33%), Query Frame = 0 

Query: 56  RAAVFSEPNKPLTIQEFHMPRPKAGEVLIKIKACGVCHSDLHVMKGEIPFPI-PCVVGHE 115
           +AAV  EPNKPL I++  +  P+AGEV IKI    +CH+D +   G+ P  + PC++GHE
Sbjct: 11  KAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHE 70

Query: 116 ITGEVVEHGPLTDRKTIERLPIGAHVVGAFIMPCGNCSYCSKVST 160
             G V   G     + +  +  G HV+  +   C  C +C    T
Sbjct: 71  AAGIVESVG-----EGVTEVQAGDHVIPCYQAECRECKFCKSGKT 110

[Close]
BLAST of Lsi01G020150 vs. TAIR 10
Match: AT5G43940.2 (GroES-like zinc-binding dehydrogenase family protein )

HSP 1 Score: 73.6 bits (179), Expect = 1.8e-13
Identity = 37/104 (35.58%), Postives = 55/104 (52.88%), Query Frame = 0 

Query: 57  AAVFSEPNKPLTIQEFHMPRPKAGEVLIKIKACGVCHSDLHVMKGEIPFPI-PCVVGHEI 116
           +AV  EPNKPL I++  +  P+AGEV IKI    +CH+D +   G+ P  + PC++GHE 
Sbjct: 24  SAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEA 83

Query: 117 TGEVVEHGPLTDRKTIERLPIGAHVVGAFIMPCGNCSYCSKVST 160
            G V   G     + +  +  G HV+  +   C  C +C    T
Sbjct: 84  AGIVESVG-----EGVTEVQAGDHVIPCYQAECRECKFCKSGKT 122

[Close]
BLAST of Lsi01G020150 vs. TAIR 10
Match: AT3G19450.1 (GroES-like zinc-binding alcohol dehydrogenase family protein )

HSP 1 Score: 62.0 bits (149), Expect = 5.5e-10
Identity = 32/96 (33.33%), Postives = 52/96 (54.17%), Query Frame = 0 

Query: 62  EPNKPLTIQEFHMPRPKAGEVLIKIKACGVCHSDLHVMKGEIPFP-IPCVVGHEITGEVV 121
           +P+  L+   + +    A +V IK+  CG+CH+D+H +K ++     P V GHE+ GEV+
Sbjct: 18  DPSGVLSPYSYTLRSTGADDVYIKVICCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVL 77

Query: 122 EHGPLTDRKTIERLPIGAHV-VGAFIMPCGNCSYCS 156
           E G       + +  +G  V VG  +  CG+C  CS
Sbjct: 78  EVG-----SDVSKFTVGDVVGVGVVVGCCGSCKPCS 108

The following BLAST results are available for this feature:
BLAST of Lsi01G020150 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
A4YGN03.4e-2048.00Succinate-semialdehyde dehydrogenase (acetylating) OS=Metallosphaera sedula (str... [more]
P9WQB81.1e-1543.88Putative alcohol dehydrogenase D OS=Mycobacterium tuberculosis (strain CDC 1551 ... [more]
P9WQB91.1e-1543.88Putative alcohol dehydrogenase D OS=Mycobacterium tuberculosis (strain ATCC 2561... [more]
P801752.5e-1541.00NDMA-dependent alcohol dehydrogenase OS=Amycolatopsis methanolica OX=1814 PE=1 S... [more]
P123111.2e-1440.78Alcohol dehydrogenase OS=Geobacillus stearothermophilus OX=1422 GN=adhT PE=1 SV=... [more]
BLAST of Lsi01G020150 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L3051.6e-7390.51Oxidoreductase OS=Cucumis sativus OX=3659 GN=Csa_4G337920 PE=4 SV=1[more]
A0A5A7V7N11.0e-7288.61Alcohol dehydrogenase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32... [more]
A0A1S3BLX21.0e-7288.61alcohol dehydrogenase OS=Cucumis melo OX=3656 GN=LOC103491279 PE=4 SV=1[more]
A0A6J1E0R25.7e-6376.88alcohol dehydrogenase 1B OS=Momordica charantia OX=3673 GN=LOC111024875 PE=4 SV=... [more]
A0A6J1HTG68.5e-5977.71alcohol dehydrogenase 1 OS=Cucurbita maxima OX=3661 GN=LOC111466018 PE=4 SV=1[more]
BLAST of Lsi01G020150 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038903768.19.3e-7692.95alcohol dehydrogenase [Benincasa hispida][more]
XP_004142661.13.3e-7390.51uncharacterized protein LOC101207246 [Cucumis sativus] >KAE8649602.1 hypothetica... [more]
XP_008449387.12.1e-7288.61PREDICTED: alcohol dehydrogenase [Cucumis melo][more]
KAA0062426.12.1e-7288.61alcohol dehydrogenase [Cucumis melo var. makuwa] >TYK27455.1 alcohol dehydrogena... [more]
XP_022158376.11.2e-6276.88alcohol dehydrogenase 1B [Momordica charantia][more]
BLAST of Lsi01G020150 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G63620.12.1e-4961.78GroES-like zinc-binding alcohol dehydrogenase family protein [more]
AT5G63620.22.1e-4961.78GroES-like zinc-binding alcohol dehydrogenase family protein [more]
AT5G43940.14.8e-1436.19GroES-like zinc-binding dehydrogenase family protein [more]
AT5G43940.21.8e-1335.58GroES-like zinc-binding dehydrogenase family protein [more]
AT3G19450.15.5e-1033.33GroES-like zinc-binding alcohol dehydrogenase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013154Alcohol dehydrogenase, N-terminalPFAMPF08240ADH_Ncoord: 80..156
e-value: 3.9E-23
score: 81.4
NoneNo IPR availableGENE3D3.90.180.10coord: 42..160
e-value: 4.5E-38
score: 133.2
NoneNo IPR availablePANTHERPTHR43350:SF2NAD-DEPENDENT ALCOHOL DEHYDROGENASEcoord: 55..156
NoneNo IPR availablePANTHERPTHR43350NAD-DEPENDENT ALCOHOL DEHYDROGENASEcoord: 55..156
IPR011032GroES-like superfamilySUPERFAMILY50129GroES-likecoord: 52..155

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G020150.1Lsi01G020150.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010033 response to organic substance
cellular_component GO:0005739 mitochondrion
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016491 oxidoreductase activity