Lsi01G020120 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi01G020120
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr01: 27470067 .. 27480237 (+)
RNA-Seq ExpressionLsi01G020120
SyntenyLsi01G020120
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGATGTCAACACTGTGCGGGTCCTCTTTCAAAGGATATGGTCCTGTCCTTCATTCTGAATTTTTTTCCATTGTCTTGACCTCCACAGAGTCTCACTTTAATCTGTAATTCTGTATGTATATTACAGGAAACAAGTGCTTGGACAATTCCTCCTCTTATTAGGGATAGTTTCTCTATGGTATTATTCTTTTTTCTTACGTCACCTTGCATTCATGATCTTCCTTACTCTCTAAATATAGACCATTTAGAAAATTGTAAAATGATCTTGCTTCCTTTCATGTTGTACTGACCTGTGCATGTTTGTGATACTCCACTTTATTGTTGGGATGTTTTTGTACATCTCGTAGATTGGCTCTGCTGTTGGTGGTACTGCTAGTGCTTTCTATGGATTTAACAATGGTAATGTACACCTTCCCTTTCAATGAATACAACAAATTCAATACGAGCTATTATCCAAACGCTCTACTAAATTACATGATCAACATTAAAACCATCCTACGTAATCTTTACTGTATTCTGTTTTTTTTTTTTTTTTTTTTTTGTTAAATAGCTCATCTTTTAATGCCTTTGCAGTGATGCCTGTTGTTCAGAGATCAGTGAAAGGGCCAATGTGGTTGCATTTTCTTATTGGTGTAAGTACCTTTCTGCTTTCCAATTTGTTATGATTATGAACTGTTACAAAATCTGTCTCCAGATACTTTTGAATCTTAGATTTTTTATGGTTATTCTTTTGGTGTGATAGAAGTTGTAAGAGTCTGTATAATCTTGGTTAATATCGGGTTTCGGCATTGTTGTTCTTTTACTTGAGATATAAACTAATAGTTAAAGAAATCTTTATTTTGGAGACAAATTTTGGATATTTTGTTTCTTTGTAAATGAGCTATTGCTCTTGTCATTATATCAATGAAAAGTACCGTTTCGTTTATAGAAAAAAAAACTAACAGTGAAAGAAATCTTTTTTCTGCACAAACATGAGGGTTTCAACACTTCAATTGACACTGTTATAGTGCTAATATTAAGGTTATTTTACTACTGTAAATATCTTTTGTTATATTGTACCATTGGGTCTTTTTACTTTCTCCTACTTAGGTTACTCTTGTACAGTTGTATATATATATATATATCTTTAGTGGATGGTATAGAATATTTAGATTCTCTCAAACCTAAGAGTTTAAAATGGTATCAGAGCAGGTGGTCCAGGGAGGTCATGTGTTTAAACTCTTGCATTGTTATTCCTTCCCCAATTAATATTGATTTCCACCTGTTGTTGGGTCTTCTTCATATTTCAAAGATGATATGACATTAAATTTGCCCATCAACTTAAGCTTTTAGGTCGATCAATGATTTGAAATGGTATTAGAGCCAGATCTATGACAATAATAGCAAACATCATCTCCTGAATTTGATCTTTGGTTGGTGGGATAACCTTTGGAGCTATTTGATCCAACCCTTTATTACCTCTATAGTCATTTTTGTGCCCAATCAAAACACGGCTAGAATCAGACGACAAAATTACTTATGGCTTCTCTATATGAAGTATTCGAGTATAAGCTTCTTCCAACGATGAGATATTTGAGCTGTCATCTCATATTTAGGAGCAAGACCAACTAAGAAACTCATGATAAACAATTTCTCTCGTTGAGTCATCAACCATAAGGTAACTTGTAAAAGATTTCTGTCATTGATTAAGTTGATATAGAGTCTTACATACGTCAAACACTATATTGATGTTCTCTTTTCTAGAATAGAGAAAATCCAAAAATTTAGTAGGTCTTTAACAGATTTGCAATAATTAACTAACCCAACGATCTCACGCTCAATAGAATTCTTGATTTGTATAAGCATTCTTGAATCGTCCCGCAACCAAATCTTTGTGAGCCAGTATATTTCATGTCCTACAGTTGATCATTGGGCTGCATTGGAACAAATTCTATATTATTTGAAGGTTGCTCCTGGGTGTGGTTTATTATATAAGGATTATATGGTCATACTAATATTAAATGTTTCTCAGACGCCAATTGGGCATGATCTAAAGAAGATAGAAGATCAACTTTAGGATATTGTGTTTTTTTCGGTAGTAACTTGATTTCTTGGAAGAGTAAGGATCATGTTCAGGTGTTGAATTAGAATATAGAGCAATGATACAGTCTGTGTGTGAATTAGTTTGAATATATCAACTTCTTGTTGAGTTGGGATTTGACATTAGCACACCAAAATTGTAGTGTGATAATCAGCACTTAGCAAACCACAAGAAAGGAGATCTTTTGAGTTCTCTTGGCAACTACATGTATCAATGAAGGTGTACACAAACTGACACATTGAGCATAATGGGAAAACTAAAAAAACTAAAAAAAAACACAACCTTTATTTGTCTTTTAGTTTTAGGAAGTATCTCATCAAAAGGGTTTCATGGGCTCTCTCCTCTCCTACCCCCCTACCTCAACCATAGCTTCGACAACCCTTTCTCCCTGCCCTGTCCATAGTTCCAACGACCCTGAATTGACCATAGCACCAAAGACCCTTCCTCACCTCTGATCAGCAAGTGTCCAGTCAACCGTCTCCATCACTTCTCCACCTGAACCCAACCATACTTACCAAACTCGCATTGCAAACAATGGATATCAAAAGTTGCAATATCAATACCAGACACTACTGCATTTGGGTTGATGATTCTAGATTTTCGGTCGAAGATTTGGAAAGAGGTCAGAAGGTTCTTTCTTCTCGGATGATGGAGTGGTTTGTAGAAAACCTTAGCAACATGATCAAGGACCAAGTTCAAGCCTTCTTTTTAGATAAAACCAGAAATGGTCGTGGTATTTCTCGGCCGGCCAAGTTTTGCTCTAAAGAGGAATGGTTAGTAGAATGTGCCTTTTGGCCTTCCTCGGGTGGTAAAAAAAATATCCATATTCCAACCGGAAGAAATAAGCAAGGTTGGCTCTCTTTAAACAGAGCTTTTTCAGGAATAGCTACAGCTAAAGTGCGATCATAATCTAAAAAAATCAGCCAAGATAGTTTTGAAAGCTTGAAGGATAATCAGATACACTTCACTAATTCTTCAATTTGGGTGGAAAAGGAGAAAGATATGCTGAATATGGGTTTTCATTCCCTTCTCGTGGTGATGAAACTAATGGAATATTACTCTTGGAAAGATGTTAAAATCACCCTCGAAGAATTCTTCCAAGTCTCCATTTCAATTAACCCTTATTTAACTGATAAGGCCTTGATCAAGTTCAATAAACAGATCGACTCAAATTTTACAAATGGAAAATGGTTTGAATATGAAAATTTTCACCTCAAGATGGAGCATTGGTCCAAAATGAACCACAATCTACCGGAAGTGATTAATTATTACGAGAGTTGGATTTCCATCAAGAATCTACCTTTGCCCTTTTGGAAAAAGTTCGTGTTTGAAGCTATTGGGTATTATTTGGGTGGTTTGATAGAGATTTCTTCACAAACGCTAAATTTTTTAGTTTGTTCTTCAGCAATTATTAAAGTTCAAAGTTATGTATGTGGTTTCATCCCAACATCCCTACCTATTGAAGATTCAAGTTTGGGGAAACTTTTGATCCATTTTGAAGGCAAGGACTCTTTGGCGGATCAGAATAAAGTTCTACCCAAAAGAAGCAGCTTTTTGGCATCTGACTTTTCCAATTCTCTGGATATTATTAGAATTAAAGCTGCCATGACAAATGAGGGCTTCTCAGTAGAGATGTTTGAACAAAAAGATGACGTTGAAAAGGAAGTTGAAATGTTACAACCAATTGGAGTCGAGACAAACTCAAGAGATATTACATTGGAAAATGGATCCGGCTGCTTGAATATTGAATAAACAGCACAAACCTTGGAGAATGAAAAGGCAGATCCAAGTACAATGGGTGCATTTAATCAGATCCTTCCTCTCTCCTCCGAATTAATGAGAAACGAAACACAAGACACATTGGCAAAAGGGAAGCAGACGATTCATCCATCCTCTTCCTTTATTCGAGACTACAACATTCAAGAAGGAAATTTAAAAGACAAGGCAGCTCGACAAGAAGGAGAATATGATTCAAATGTGAACGACCATATTCTCACTCTTGGCCAACTCAGCCTCTCTCTCCAAATTCACCTTTCCCAAGCACCCAACTGGAAGTGAAGGAGTCTGACCGGGGTTTTCAAAAAGATTTTAATGAGATAGCAAGTCCTCGAAGCAACATCGATACACCCACATTTTCTAGCTAACAAAAATTCAAATCCTCAGTTGATTCATTATTAAATCATTCGAAAAATTTCGATTCCTTGGAGGATATTTGTGTTCATGCTCTGGTTCCACAAAGTAAAAGTCCACCAAGGACAAGACATTCTACTGCTGTGTTCGTCCCAATTTCAACATCCCTGGTTCACAAGTTTCTTTTGTCCAAAGCACCTTCTCTCAAGATTACAAGAAACAAACAACCCATGATTTAGAGGATGAGTCCATTGATGAGTAAATGTCAATGTAAGTAGTGAAGAAGCCACAACTGAGGGGGAAATCTTGCTGGATCAAATAGGGGAAGACTGTAGAACTCTCTTCCTACAACAACAGTGCTCCTCGGTCAGAGATTTCTACTTATCTCCTCCTCAAATTCCCTTTCAATTTCTTCTTTAGTGGCTGCGTGTGACTTTCAAAGGCAGGAAATTGCATCTCCAAGGGAGGTGCTTCAAACATGAAGATGATTTCTTGGAACATAAGGGGCCTCAATGATAAATCGAAACAGACAGCCTTGAAACATTTTATACAAAGTCAACACCCAGATCTAGAGATCATTCAAGAAACCAATTGTCAGGAGTTTGACCAACCGTTCATTAAGGCGATATGGAGTTCAAATGGAATCGGTTGGATATCCGTGGAAGACTATGGCAAATCTAGAGGCCTATTAATCATGTGGGATGAAAGTAAAATCATTCCTCTGGAATTCCTCAAGGGTGGTTATTCACTTTTATCAAAATCATGACCATTTGCAAAAATACTTGTTGGGTGACTAATGTTTTTCAAAATCTGTTGGAACTATCACTTTCTGCACGATGCATAACCTTTTCAAGTACCGTGATAAGACAATGGTCTTCATCTACTTTTCGTTTGGATTAAGTGAAGTCATGTTTTCATTTTTGATTTCTACATTCTTCAAACGAGTGAAAATTGTTGTGGCAGTGGAAACACCTTTTCTAGGGTACATTAACTTTGCGAATTATGAACGTGCTCGTGCTAGACTTTGATGGAGAAACTTATGGAGGGCCCCTCTGAAGTAAACCACGTTGCTATACTGTACAATTGGTCTTTACATGGATAAGCTTATTTGGCGTTGTTCTTCTCTTTTAACTGCTGGTCGCAAGAGCATTTTTTTTTATCTTCGGGAGCGTTTGCCTATCCTGGGATTGGGATTCCATGTCATGGGATTTTATTTGTTCGGCATCAAAGTTGTATATTTGGCTACTTAGCAATGGTTTCTTATTCTATCGAGCTCAAAATTCGGGGTTCATCCCTTATCAACATTTGGTTTGTTGCAGCCGTTGTTTTCTTCTTCTTTGGGTTTGGTTTTTCGTCAATCATGCTTGTGGGCTCTTCGTAATTCTCAAGTTCAACCTTGGAAGCTTTCTTCTATTTGTTTCGGGCTTGATCGAGTTAAAGTCTTCTGGTATGTGTTTCTTGAGTTATGTGTTGGATTGTTTTTCTTTTTCTCCAGAGTTTTAGTCTTTATGATATAATTTGGTTCTAGCCTTGTATTGGCATGTTTGAAGTTTTAACGTTGTATCCGCTTATGTGCTTTGAGCATTAGGCTATTTCATTATATCAATAAATAGTCTTGTTTCCGTTTCCAAAAAAAAAAGAAAGATAATCAAGCAGCACATCATATCACATCTAATCTAGTATTCTACGAGAGGACTAAACATATTGAAGTCGATTGTCATTTTATACGCGAGAAAATTCAACGAGATTTGGTATCTACAGGATATGTGGAGACTGGAGAACAATTAGGATCTTCACGAAAGCATTGAATGGAGCACATATAGATTATCTATGTAATAAGTAGGGCATGATTAACATATATGCTCCAACTTGAGGGGAGTGTTATAGTGCTAATATTAGGGTTATTTTACTATTTTAAACATCTTTGTTATATTGTTCTTTATGGTTTTTTTACTTTCTCCTACTTAGGTTATTCTTGTACACTTGTGTGTATGTATATATATATATGTATATATCTTTAGCGAATGGAATAGAATATTTAGATTCTCTCAAACCAATATCTTTAGCGAATGGAATAGAATATTTAGATTCTCTCAAACCTAAGAGTTTAACAAAGATATATAACGTTGATTAATTAGGGGTGAGCATAATGGACCAAAAAATTGAGTTGACTAATCAAACCCGACCGACGGACTTTGGTCGGTCGGTTTAATGTTATATATCGGGCGGAGTTGGTTTTGCACATGCAAAACAAACTTTTAGGTCGATCGGTGGGTCAATAAAGGTTGAGTCCGACCAAATTGACTGACCTTTTAAAAAAAAAACTAAATTGAATGCAACTTGCCTTGGGAAGATCGAGAACTGATGAGTTCTGTGCATGGGAAGACTACACCTTGGGAAGACACAACTTATGTCATGTGCATGGAGACTCCTTTAAATGGATTTCTATTTCTGTGTTATTCTAATCCATCGGTTTATCGTTTTGAAGATGCAAGGATATACACTTCCCCTTAGTGCCATCTTTCTAAGATTCTTATGTATTTTTCGGTACAAATATTTTTTGAAAAATATATTATTTTTTCTCCCTTTTCTCATTTAGTCATTCTGATGCAGCCTAAAAGATAAAAGGAGATAAATCTCCAATAATAAAATCAAAGTTATCAATACAAGAAGGCAGTTACTCTATTTATAGAGAATTGGAAACCAAACTAATCCTAATCCTAATAAACCCAGGAAACTAATCCTAATCCTAATCAATCAAGGAAATTAATTCTAATCCTAACGAATCAAAGATTTGACCAAGATACTCCAAGTCACTCTAATCCTACTACATCATTCTATTTCTAAAGAAAAAAAAAACTAGTCGTCGAGTTTAAAAAGAAAATGAAGAATACAATTTTTTTCCCGATGATTTGTTAAAATCTCAAATAAAATCCTTGTCATGTGGAAATCTTGCACGACAACTACAAAGATTGAAAGGCCCCATAAAAATTTGCGAACGGTCATCAAAATTTTTCTTTGATTGCTAAGAACCGTATAGATGTCCGCCACCAAGATTTTGCTCAACCACTTTAGTCAAAGTTGGAGTATCAAAGCAACTCATAAACCTATTTGAAAATTTGTTGTTGCATAACTCAGAATTTGTGAAGAAATGAGTTGAAATAAACCCACAAAAAGGGATTCAGTAGATCAAAACTGGGGAGGATTGAACTTGGGTCGGATCGCGTGGAACACATGCTAGGAATTGAGCATGGATGTTAGGTCGAATTGCATGGGTCGGTTCAAATGGATCATGTGTTTCCACGTATTCTTTCTCGTTCCAAGCAATCGATTGCAACCAGAGATTCAAATTTCTTCAAATTGGGTTGCCCGTGGTTGTAATCTTCTTCGCCAAAATTGCCTCTGTCTATTATTACGTATTCTTTCTTCAACACGACTTTCTTAGCTTTTGCTCTAGATTTTTCCTCGCTCGTTTTTTCTTATTTGCTCGATTCGTCCATGTGTGGGTTCCAAATTTCTTTTGGGTTTTCCATCTTATGTGTTTTTGGCAAGATTCCCCAACCTTGGTTGAATTCTTGATCTTCCTTTAATCTAGCAAGCTCTTGGTTTTGATTTTCTTGAATTATTTCTTTTTTTTTTTAACTCTTGCATTGTTCTGAAAGTTGTTCTATGTTCTGAGTTATCTTTTCTGACAAACGCTGGATCTATTTTACTCCCTTCTTCATTTTCTCCAATACTTCAAGATATACAAATTGGGTGCTCTTAAATAAGTTTCAACCTCATAGTTGTTATAGGGTTGATTCTTGGATTTTCTTGAATATGTTTCAACCTCTCTTGGTCGTTCTTCATAACCAAGATAATGATTTCTCCCTTAAACATATTAGTTCTGCTATAAAATTCCATTATTGGATGACCCTTCAAATTTCTTCTCGCACTTCTTTAATTTAAAGGGTTCAACCTAGTTAGGTATGTGTTGTTTGACAACCAGCACAACTCACGAAGCTCCATCTTGTGATCAACGTTACCAAGAGTTTCTTGGTCTTCCACCGGCGGTAGTCAACATTGGCCCAGACGGCTGCTCTGATACCAAATTGATGTAGCCTAAAAGATAAAAAGAGAGAAATCTCCAATAATAAAATCAAAGTTTTTATGAATTAAAAGTTATCAATACAAGAAGACAATTACTATATTTATATAGAATTGGAAAGTAAATTAATCCTAATCTTAATAAAAGAAACTCATTCTAATCCTAATAAACCAAAGAAATTAATCCTAATCAATCAAGGAAACTAATTCTAATCCTAACCAATCAAAGATTTGACCAAGATACTCCAAGTCACTCTAATCCTACTACATCATCAGTTTCCAACCATAATTTTTCATCTCTTTCTTATCTTCTTCTTTTCTCCGATCTAGTTTCCCCCAAAATAAATCTTGCGTCAATCAATCGTGGAGATCTTGTTCTACCTTCTATTTATAGATAAGGAGGGTGTCATGAAACAATTGCCTTTTTTAAGCTATTTTGTGGTATATTTGGTTTGAGAAAATCAAAAGATTTTTTTAGAAGTGGAGATGTCTTGGGGAAGGTTTGGTCTTTCAATTGGGTTTGCCTTTGTTGCTTGGTTTGACTGTTGATAAAAACTGGCAACGATAATTTTCAGAATGACCGAACCTACTGCTGCTTGATTGGTGATATGGATTATGCTCTCACTGGATAGCTAAGTTTGGAAGCAAGTGTGCTTAAGAAAATTACAAGGGTGTTATAGGGTGGGGCTTTTTGGAGGACTGTTTTTGTTTTTATTTTTATCCGTTGGAATTTCTACTATTTATGAATGATTATGTGTTATTATTGTGTATAATATTTAGTCTTTATTGTCTTATTCTTTTCATATTTATAATCGGTATTTATTCTGTATAAGAATACCTAATTTGCACATTGAATTATCAAAAAGATTTTGAAATAATCTGAGGTTTGTCCTTAGATTTATCACCCTAGCTTTTGGGCGTTTGCATCGTAGAATTTTTGTGATTATTTTTTAGGTCTTATTCTCTTAGATTGAGTCGTTTTCTTCTCTGTTAGGCTAGTCCCTTTTTGGTACACTTTCCCCCTCAATGAGAATTTCATTTTTCAAAAAAAAAAAAATGCTGGTGCACGTAGGGTGCAAGTACGGGTCCTTAAGATGAATTTTAATGTTTTAGTCCTCTTTTGAGTGGAAACAATTTATCTCACTTGCAGGCTCCTCCTGTGATCGTATTTTCTTCAGCCTGTGCAGGAATGACAGGTTAGTTACCCCCCAACAAATGAGTGCTTTACTTCTTTAGGATGGAGTAGTAGTGATGTGAAATGCAATTTTGTTTAGTATTTGGTAATAGGAACATATTCGAAGTAATTCTTAAATTACCGATTGACCTAAAAACTTAAGCTAAATCTTAAGTTGATGGGTGAAAGCAAATTTAATATCATATTATTTTACACTTCTTCTCACTTGTGGGCTTGAAATATGAAGAAGACCCAACAAGTGGAAATCAATATAAATTGGGAAGGAAATAACATTGCAGGAGTTTGACCGATACCATCTTGAATCACCAATCGGCCTAAAAGCTTAAGCTTTTGGGTCAATCGGCAATTTAACATTACCTTAAGAAAAATGACTTTGATAGCGATTGTTAGTGATATTTTCATTTGAAGGTGGTATTGAATACAAAAGTTGTTTCTAAATGAATGGTTACAGGTGGTGCTGTTCCAGCTTTGGCGCAACTCGTTGCCTCATCTTATCATTCGGCTGTGTCTCCTTTGTTAACATTGTCTTCAAAAAATGATAAGGCTTAGAATTCAAGATCTTCTTCTACCTTGTAATGGTAATGTATATGGTGGTGATTCTTATAGTATAGGTTTATATATACATAGCTTATATTTTGCTCGAGGATAAGACGATTTTTATTTATTTATTTACTTTTT

mRNA sequence

ATGAGATGTCAACACTGTGCGGGTCCTCTTTCAAAGGATATGGAAACAAGTGCTTGGACAATTCCTCCTCTTATTAGGGATAGTTTCTCTATGATTGGCTCTGCTGTTGGTGGTACTGCTAGTGCTTTCTATGGATTTAACAATGTGATGCCTGTTGTTCAGAGATCAGTGAAAGGGCCAATGTGGTTGCATTTTCTTATTGGTCCGTTGTTTTCTTCTTCTTTGGGTTTGGTTTTTCGTCAATCATGCTTGTGGGCTCTTCGTAATTCTCAAGTTCAACCTTGGAAGCTTTCTTCTATTTGTTTCGGGCTTGATCGAGTTAAAGTCTTCTGGCTCCTCCTGTGATCGTATTTTCTTCAGCCTGTGCAGGAATGACAGGTGGTGCTGTTCCAGCTTTGGCGCAACTCGTTGCCTCATCTTATCATTCGGCTGTGTCTCCTTTGTTAACATTGTCTTCAAAAAATGATAAGGCTTAGAATTCAAGATCTTCTTCTACCTTGTAATGGTAATGTATATGGTGGTGATTCTTATAGTATAGGTTTATATATACATAGCTTATATTTTGCTCGAGGATAAGACGATTTTTATTTATTTATTTACTTTTT

Coding sequence (CDS)

ATGAGATGTCAACACTGTGCGGGTCCTCTTTCAAAGGATATGGAAACAAGTGCTTGGACAATTCCTCCTCTTATTAGGGATAGTTTCTCTATGATTGGCTCTGCTGTTGGTGGTACTGCTAGTGCTTTCTATGGATTTAACAATGTGATGCCTGTTGTTCAGAGATCAGTGAAAGGGCCAATGTGGTTGCATTTTCTTATTGGTCCGTTGTTTTCTTCTTCTTTGGGTTTGGTTTTTCGTCAATCATGCTTGTGGGCTCTTCGTAATTCTCAAGTTCAACCTTGGAAGCTTTCTTCTATTTGTTTCGGGCTTGATCGAGTTAAAGTCTTCTGGCTCCTCCTGTGA

Protein sequence

MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPMWLHFLIGPLFSSSLGLVFRQSCLWALRNSQVQPWKLSSICFGLDRVKVFWLLL
Homology
[Close]
BLAST of Lsi01G020120 vs. ExPASy TrEMBL
Match: A0A6J1EAN3 (uncharacterized protein LOC111432392 OS=Cucurbita moschata OX=3662 GN=LOC111432392 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 9.8e-32
Identity = 67/68 (98.53%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1   MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGP 60
           MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFN+VMPVVQRSVKGP
Sbjct: 34  MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGP 93

Query: 61  MWLHFLIG 69
           MWLHFLIG
Sbjct: 94  MWLHFLIG 101

[Close]
BLAST of Lsi01G020120 vs. ExPASy TrEMBL
Match: A0A1S4E0V5 (uncharacterized protein LOC103495968 OS=Cucumis melo OX=3656 GN=LOC103495968 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.3e-31
Identity = 67/68 (98.53%), Postives = 67/68 (98.53%), Query Frame = 0 

Query: 1  MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGP 60
          MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFN VMPVVQRSVKGP
Sbjct: 4  MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNTVMPVVQRSVKGP 63

Query: 61 MWLHFLIG 69
          MWLHFLIG
Sbjct: 64 MWLHFLIG 71

[Close]
BLAST of Lsi01G020120 vs. ExPASy TrEMBL
Match: A0A6J1HN28 (uncharacterized protein LOC111466117 OS=Cucurbita maxima OX=3661 GN=LOC111466117 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.8e-31
Identity = 66/68 (97.06%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1   MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGP 60
           +RCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFN+VMPVVQRSVKGP
Sbjct: 34  IRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGP 93

Query: 61  MWLHFLIG 69
           MWLHFLIG
Sbjct: 94  MWLHFLIG 101

[Close]
BLAST of Lsi01G020120 vs. ExPASy TrEMBL
Match: A0A6J1D6Q7 (uncharacterized protein LOC111018136 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018136 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 3.7e-31
Identity = 65/68 (95.59%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1  MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGP 60
          MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFN+VMP+V+RSVKGP
Sbjct: 4  MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPIVRRSVKGP 63

Query: 61 MWLHFLIG 69
          MWLHFLIG
Sbjct: 64 MWLHFLIG 71

[Close]
BLAST of Lsi01G020120 vs. ExPASy TrEMBL
Match: A0A6J1D7Q1 (uncharacterized protein LOC111018136 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018136 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 3.7e-31
Identity = 65/68 (95.59%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1   MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGP 60
           MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFN+VMP+V+RSVKGP
Sbjct: 53  MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPIVRRSVKGP 112

Query: 61  MWLHFLIG 69
           MWLHFLIG
Sbjct: 113 MWLHFLIG 120

[Close]
BLAST of Lsi01G020120 vs. NCBI nr
Match: XP_011658376.1 (uncharacterized protein LOC105435977 isoform X1 [Cucumis sativus] >XP_031744137.1 uncharacterized protein LOC105435977 isoform X1 [Cucumis sativus])

HSP 1 Score: 148.3 bits (373), Expect = 4.1e-32
Identity = 71/78 (91.03%), Postives = 73/78 (93.59%), Query Frame = 0 

Query: 1  MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGP 60
          MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGP
Sbjct: 4  MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGP 63

Query: 61 MWLHFLIGP----LFSSS 75
          MWLHFLIG     +FSS+
Sbjct: 64 MWLHFLIGAPPVIIFSSA 81

[Close]
BLAST of Lsi01G020120 vs. NCBI nr
Match: XP_031744138.1 (uncharacterized protein LOC105435977 isoform X2 [Cucumis sativus])

HSP 1 Score: 148.3 bits (373), Expect = 4.1e-32
Identity = 71/78 (91.03%), Postives = 73/78 (93.59%), Query Frame = 0 

Query: 1  MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGP 60
          MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGP
Sbjct: 4  MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGP 63

Query: 61 MWLHFLIGP----LFSSS 75
          MWLHFLIG     +FSS+
Sbjct: 64 MWLHFLIGAPPVIIFSSA 81

[Close]
BLAST of Lsi01G020120 vs. NCBI nr
Match: KAE8647791.1 (hypothetical protein Csa_004224 [Cucumis sativus])

HSP 1 Score: 148.3 bits (373), Expect = 4.1e-32
Identity = 71/78 (91.03%), Postives = 73/78 (93.59%), Query Frame = 0 

Query: 1   MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGP 60
           MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGP
Sbjct: 59  MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGP 118

Query: 61  MWLHFLIGP----LFSSS 75
           MWLHFLIG     +FSS+
Sbjct: 119 MWLHFLIGAPPVIIFSSA 136

[Close]
BLAST of Lsi01G020120 vs. NCBI nr
Match: KAG7027560.1 (hypothetical protein SDJN02_11574 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 146.4 bits (368), Expect = 1.5e-31
Identity = 70/83 (84.34%), Postives = 75/83 (90.36%), Query Frame = 0 

Query: 1   MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGP 60
           MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFN+VMPVVQRSVKGP
Sbjct: 34  MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGP 93

Query: 61  MWLHFLIGPLFSSSLGLVFRQSC 84
           MWLHFLIG + +  L +V   +C
Sbjct: 94  MWLHFLIG-VSTLLLSIVIIMNC 115

[Close]
BLAST of Lsi01G020120 vs. NCBI nr
Match: XP_038882424.1 (uncharacterized protein LOC120073695 [Benincasa hispida])

HSP 1 Score: 146.0 bits (367), Expect = 2.0e-31
Identity = 67/68 (98.53%), Postives = 67/68 (98.53%), Query Frame = 0 

Query: 1   MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGP 60
           MRCQHCAGPLSKDMETSAWT PPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGP
Sbjct: 377 MRCQHCAGPLSKDMETSAWTTPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGP 436

Query: 61  MWLHFLIG 69
           MWLHFLIG
Sbjct: 437 MWLHFLIG 444

[Close]
BLAST of Lsi01G020120 vs. TAIR 10
Match: AT5G18250.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 119.0 bits (297), Expect = 2.5e-27
Identity = 49/68 (72.06%), Postives = 61/68 (89.71%), Query Frame = 0 

Query: 1  MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGP 60
          +RC HCAGPL++++ETS WT+ P IRDSFSMIGSAVGGTASAF GFN+ MP+V++ +KGP
Sbjct: 10 IRCHHCAGPLTRNLETSKWTVDPFIRDSFSMIGSAVGGTASAFIGFNHAMPIVRKWIKGP 69

Query: 61 MWLHFLIG 69
          MWLHFL+G
Sbjct: 70 MWLHFLVG 77

[Close]
BLAST of Lsi01G020120 vs. TAIR 10
Match: AT3G04040.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18250.1); Has 58 Blast hits to 58 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 118.2 bits (295), Expect = 4.2e-27
Identity = 49/67 (73.13%), Postives = 61/67 (91.04%), Query Frame = 0 

Query: 2  RCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPM 61
          RC HCAGPL+K++ET+ WT+ P IRDSFSMIGSAVGGTASAF GF++VMP+V++ +KGPM
Sbjct: 15 RCHHCAGPLTKNLETNEWTVAPFIRDSFSMIGSAVGGTASAFIGFHHVMPIVRKWIKGPM 74

Query: 62 WLHFLIG 69
          WLHFL+G
Sbjct: 75 WLHFLVG 81

[Close]
BLAST of Lsi01G020120 vs. TAIR 10
Match: AT2G41945.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18250.1); Has 57 Blast hits to 57 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 60.5 bits (145), Expect = 1.0e-09
Identity = 30/84 (35.71%), Postives = 44/84 (52.38%), Query Frame = 0 

Query: 2   RCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPM 61
           RC  C   L+ + E   WTI P++ D+ ++ GS +GG  SA + FN  +P +Q    G  
Sbjct: 30  RCPRCLSLLNPNSEKGEWTITPVLHDAAAVAGSGIGGLLSAVHAFNTGIPYLQNRFSGSK 89

Query: 62  WLHFLIGP---LFSSSLGLVFRQS 83
            L FL+G    L  S +G  F +S
Sbjct: 90  RLSFLVGVPLLLVYSGVGAAFGES 113

[Close]
BLAST of Lsi01G020120 vs. TAIR 10
Match: AT2G41945.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 58.2 bits (139), Expect = 5.2e-09
Identity = 29/81 (35.80%), Postives = 42/81 (51.85%), Query Frame = 0 

Query: 2   RCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPM 61
           RC  C   L+ + E   WTI P++ D+ ++ GS +GG  SA + FN  +P +Q    G  
Sbjct: 30  RCPRCLSLLNPNSEKGEWTITPVLHDAAAVAGSGIGGLLSAVHAFNTGIPYLQNRFSGSK 89

Query: 62  WLHFLIGP---LFSSSLGLVF 80
            L FL+G    L  S +G  F
Sbjct: 90  RLSFLVGVPLLLVYSGVGAAF 110

[Close]
BLAST of Lsi01G020120 vs. TAIR 10
Match: AT2G41945.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04040.1); Has 57 Blast hits to 57 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.2 bits (139), Expect = 5.2e-09
Identity = 29/81 (35.80%), Postives = 42/81 (51.85%), Query Frame = 0 

Query: 2   RCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNNVMPVVQRSVKGPM 61
           RC  C   L+ + E   WTI P++ D+ ++ GS +GG  SA + FN  +P +Q    G  
Sbjct: 30  RCPRCLSLLNPNSEKGEWTITPVLHDAAAVAGSGIGGLLSAVHAFNTGIPYLQNRFSGSK 89

Query: 62  WLHFLIGP---LFSSSLGLVF 80
            L FL+G    L  S +G  F
Sbjct: 90  RLSFLVGVPLLLVYSGVGAAF 110

The following BLAST results are available for this feature:
BLAST of Lsi01G020120 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi01G020120 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EAN39.8e-3298.53uncharacterized protein LOC111432392 OS=Cucurbita moschata OX=3662 GN=LOC1114323... [more]
A0A1S4E0V51.3e-3198.53uncharacterized protein LOC103495968 OS=Cucumis melo OX=3656 GN=LOC103495968 PE=... [more]
A0A6J1HN282.8e-3197.06uncharacterized protein LOC111466117 OS=Cucurbita maxima OX=3661 GN=LOC111466117... [more]
A0A6J1D6Q73.7e-3195.59uncharacterized protein LOC111018136 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A6J1D7Q13.7e-3195.59uncharacterized protein LOC111018136 isoform X1 OS=Momordica charantia OX=3673 G... [more]
BLAST of Lsi01G020120 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011658376.14.1e-3291.03uncharacterized protein LOC105435977 isoform X1 [Cucumis sativus] >XP_031744137.... [more]
XP_031744138.14.1e-3291.03uncharacterized protein LOC105435977 isoform X2 [Cucumis sativus][more]
KAE8647791.14.1e-3291.03hypothetical protein Csa_004224 [Cucumis sativus][more]
KAG7027560.11.5e-3184.34hypothetical protein SDJN02_11574 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_038882424.12.0e-3198.53uncharacterized protein LOC120073695 [Benincasa hispida][more]
BLAST of Lsi01G020120 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G18250.12.5e-2772.06unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G04040.14.2e-2773.13unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G41945.31.0e-0935.71unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G41945.15.2e-0935.80unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G41945.25.2e-0935.80unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34459OS01G0264500 PROTEINcoord: 1..83
NoneNo IPR availablePANTHERPTHR34459:SF3OS01G0264500 PROTEINcoord: 1..83

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G020120.1Lsi01G020120.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane