Homology
BLAST of Lsi01G019470 vs. ExPASy Swiss-Prot
Match:
Q9SHZ8 (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)
HSP 1 Score: 558.1 bits (1437), Expect = 1.6e-157
Identity = 284/738 (38.48%), Postives = 430/738 (58.27%), Query Frame = 0
Query: 154 NQLLSELSKDGRVDDARKLFDQMPDRDKYSWNIMISAYANLGNLVEARKLFNETPTKNSI 213
N L++ SK G ARKLFD+MP R +SWN ++SAY+ G++ + F++ P ++S+
Sbjct: 53 NNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSV 112
Query: 214 TWSSLVSGYCKNGCEVEGLRLFSQMWSEGQKPSQYTLGSVLRACSTLGLLHSGKIIHCYV 273
+W++++ GY G + +R+ M EG +P+Q+TL +VL + + + +GK +H +
Sbjct: 113 SWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSF- 172
Query: 274 HGCIIWSGFGANVYVQSALVDMYAKCGDLASARMILNIMEIDDVVCWNSMIVGCVVHGHM 333
I+ G NV V ++L++MYAKCGD A+ + + M + D+ WN+MI + G M
Sbjct: 173 ---IVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQM 232
Query: 334 EEALVLFHKMHNRDI--------------------------------RIDDFTYPSVLKS 393
+ A+ F +M RDI D FT SVL +
Sbjct: 233 DLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSA 292
Query: 394 LASCKDLKNGESVHSLIIKTGFDACKTVSNALVDMYA----------------------- 453
A+ + L G+ +HS I+ TGFD V NAL+ MY+
Sbjct: 293 CANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIE 352
Query: 454 ----------KQGNLSCALEVFNKISDKDVISWTSLVTGYVHNGFHEKALKLFCDMRIAR 513
K G+++ A +F + D+DV++WT+++ GY +G + +A+ LF M
Sbjct: 353 GFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGG 412
Query: 514 VDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSVGSLLSAENSLITMYAKCGCLEDAI 573
+ + +A + S + L + G+Q+H + +KS +S N+LITMYAK G + A
Sbjct: 413 QRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSAS 472
Query: 574 RVFDSME-NRNVISWTAIIVGYAQNGRGKDSLHFYDQMIVDGITPDPVTFIGLLFACSHA 633
R FD + R+ +SWT++I+ AQ+G +++L ++ M+++G+ PD +T++G+ AC+HA
Sbjct: 473 RAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHA 532
Query: 634 GLVETGRSYFESMEKVYGIKPASDHYACMIDLLGRAGKLNEAEDLLNRMEVEPDATIWKS 693
GLV GR YF+ M+ V I P HYACM+DL GRAG L EA++ + +M +EPD W S
Sbjct: 533 GLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGS 592
Query: 694 LLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRSMKTLGI 753
LLSACRVH N++LG+ A + L+ LEP NS Y L+N++S G+WE+AA IR+SMK +
Sbjct: 593 LLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRV 652
Query: 754 NKEPGYSWIETKSQVHTFISEDRSHPLSAEIYSKIDGIMILIKEAGHVPDMNFALRDMDE 813
KE G+SWIE K +VH F ED +HP EIY + I IK+ G+VPD L D++E
Sbjct: 653 KKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEE 712
Query: 814 EAKERSLAYHSEKLAVAFGLLTVPKGAPIRIFKNLRVCGDCHSAMKYISSVFKRHIILRD 826
E KE+ L +HSEKLA+AFGL++ P +RI KNLRVC DCH+A+K+IS + R II+RD
Sbjct: 713 EVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRD 772
BLAST of Lsi01G019470 vs. ExPASy Swiss-Prot
Match:
Q9SMZ2 (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H53 PE=3 SV=1)
HSP 1 Score: 548.5 bits (1412), Expect = 1.3e-154
Identity = 273/641 (42.59%), Postives = 406/641 (63.34%), Query Frame = 0
Query: 185 NIMISAYANLGNLVEARKLFNETPTKNSITWSSLVSGYCKNGCEVEGLRLFSQMWSEGQK 244
N +I+ Y L AR +F+ ++ I+W+S+++G +NG EVE + LF Q+ G K
Sbjct: 354 NSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLK 413
Query: 245 PSQYTLGSVLRACSTLGLLHSGKIIHCYVHGCIIWSGFGANVYVQSALVDMYAKCGDLAS 304
P QYT+ SVL+A S+ L G + VH I ++ +V +AL+D Y++ +
Sbjct: 414 PDQYTMTSVLKAASS---LPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKE 473
Query: 305 ARMILNIMEIDDVVCWNSMIVGCVVHGHMEEALVLFHKMHNRDIRIDDFTYPSVLKSLAS 364
A ++ D+V WN+M+ G + L LF MH + R DDFT +V K+
Sbjct: 474 AEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGF 533
Query: 365 CKDLKNGESVHSLIIKTGFDACKTVSNALVDMYAKQGNLSCALEVFNKISDKDVISWTSL 424
+ G+ VH+ IK+G+D VS+ ++DMY K G++S A F+ I D ++WT++
Sbjct: 534 LFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTM 593
Query: 425 VTGYVHNGFHEKALKLFCDMRIARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSV 484
++G + NG E+A +F MR+ V D+F +A + A + LT +E GRQ+HAN +K +
Sbjct: 594 ISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNC 653
Query: 485 GSLLSAENSLITMYAKCGCLEDAIRVFDSMENRNVISWTAIIVGYAQNGRGKDSLHFYDQ 544
+ SL+ MYAKCG ++DA +F +E N+ +W A++VG AQ+G GK++L + Q
Sbjct: 654 TNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQ 713
Query: 545 MIVDGITPDPVTFIGLLFACSHAGLVETGRSYFESMEKVYGIKPASDHYACMIDLLGRAG 604
M GI PD VTFIG+L ACSH+GLV + SM YGIKP +HY+C+ D LGRAG
Sbjct: 714 MKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAG 773
Query: 605 KLNEAEDLLNRMEVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSN 664
+ +AE+L+ M +E A+++++LL+ACRV G+ E G+R L++LEP +S YVLLSN
Sbjct: 774 LVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSN 833
Query: 665 MFSVAGRWEDAAHIRRSMKTLGINKEPGYSWIETKSQVHTFISEDRSHPLSAEIYSKIDG 724
M++ A +W++ R MK + K+PG+SWIE K+++H F+ +DRS+ + IY K+
Sbjct: 834 MYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKD 893
Query: 725 IMILIKEAGHVPDMNFALRDMDEEAKERSLAYHSEKLAVAFGLLTVPKGAPIRIFKNLRV 784
++ IK+ G+VP+ +F L D++EE KER+L YHSEKLAVAFGLL+ P PIR+ KNLRV
Sbjct: 894 MIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRV 953
Query: 785 CGDCHSAMKYISSVFKRHIILRDLNCFHHFIEGKCSCGDFW 826
CGDCH+AMKYI+ V+ R I+LRD N FH F +G CSCGD+W
Sbjct: 954 CGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
BLAST of Lsi01G019470 vs. ExPASy Swiss-Prot
Match:
Q7Y211 (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)
HSP 1 Score: 526.6 bits (1355), Expect = 5.2e-148
Identity = 257/654 (39.30%), Postives = 400/654 (61.16%), Query Frame = 0
Query: 185 NIMISAYANLGNLVEARKLFNETPTKNSITWSSLVSGYCKNGCEVEGLRLFSQMWSEGQK 244
N +++ Y LG L ++ L ++ +TW++++S C+N +E L +M EG +
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 245 PSQYTLGSVLRACSTLGLLHSGKIIHCYVHGCIIWSGFGANVYVQSALVDMYAKCGDLAS 304
P ++T+ SVL ACS L +L +GK +H Y + N +V SALVDMY C + S
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAY---ALKNGSLDENSFVGSALVDMYCNCKQVLS 359
Query: 305 ARMILNIMEIDDVVCWNSMIVGCVVHGHMEEALVLFHKM-HNRDIRIDDFTYPSVLKSLA 364
R + + M + WN+MI G + H +EAL+LF M + + + T V+ +
Sbjct: 360 GRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACV 419
Query: 365 SCKDLKNGESVHSLIIKTGFDACKTVSNALVDMYAKQGNLSCALEVFNKISDKDVISWTS 424
E++H ++K G D + V N L+DMY++ G + A+ +F K+ D+D+++W +
Sbjct: 420 RSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNT 479
Query: 425 LVTGYVHNGFHEKALKLFCDMR---------IARVDL--DQFVVACVFSACAELTVIEFG 484
++TGYV + HE AL L M+ +RV L + + + +CA L+ + G
Sbjct: 480 MITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG 539
Query: 485 RQVHANFIKSSVGSLLSAENSLITMYAKCGCLEDAIRVFDSMENRNVISWTAIIVGYAQN 544
+++HA IK+++ + ++ ++L+ MYAKCGCL+ + +VFD + +NVI+W II+ Y +
Sbjct: 540 KEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMH 599
Query: 545 GRGKDSLHFYDQMIVDGITPDPVTFIGLLFACSHAGLVETGRSYFESMEKVYGIKPASDH 604
G G++++ M+V G+ P+ VTFI + ACSH+G+V+ G F M+ YG++P+SDH
Sbjct: 600 GNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDH 659
Query: 605 YACMIDLLGRAGKLNEAEDLLNRMEVE-PDATIWKSLLSACRVHGNLELGERAGKNLIKL 664
YAC++DLLGRAG++ EA L+N M + A W SLL A R+H NLE+GE A +NLI+L
Sbjct: 660 YACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQL 719
Query: 665 EPSNSLPYVLLSNMFSVAGRWEDAAHIRRSMKTLGINKEPGYSWIETKSQVHTFISEDRS 724
EP+ + YVLL+N++S AG W+ A +RR+MK G+ KEPG SWIE +VH F++ D S
Sbjct: 720 EPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSS 779
Query: 725 HPLSAEIYSKIDGIMILIKEAGHVPDMNFALRDMDEEAKERSLAYHSEKLAVAFGLLTVP 784
HP S ++ ++ + +++ G+VPD + L +++E+ KE L HSEKLA+AFG+L
Sbjct: 780 HPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTS 839
Query: 785 KGAPIRIFKNLRVCGDCHSAMKYISSVFKRHIILRDLNCFHHFIEGKCSCGDFW 826
G IR+ KNLRVC DCH A K+IS + R IILRD+ FH F G CSCGD+W
Sbjct: 840 PGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
BLAST of Lsi01G019470 vs. ExPASy Swiss-Prot
Match:
Q9CAA8 (Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H22 PE=3 SV=1)
HSP 1 Score: 526.2 bits (1354), Expect = 6.8e-148
Identity = 263/688 (38.23%), Postives = 414/688 (60.17%), Query Frame = 0
Query: 169 ARKLFDQMPDRDKYSWNIMISAYANLGNLVEARKLFNETPTKNSITWSSLVSGYCKNGCE 228
AR++FD++P + +SWN ++ AY+ G + E F + P ++ +TW+ L+ GY +G
Sbjct: 60 ARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLV 119
Query: 229 VEGLRLFSQMWSE-GQKPSQYTLGSVLRACSTLGLLHSGKIIHCYVHGCIIWSGFGANVY 288
++ ++ M + ++ TL ++L+ S+ G + GK +HG +I GF + +
Sbjct: 120 GAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGK----QIHGQVIKLGFESYLL 179
Query: 289 VQSALVDMYAKCGDLASAR-------------------------MILNIMEI-----DDV 348
V S L+ MYA G ++ A+ MI + +++ D
Sbjct: 180 VGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDS 239
Query: 349 VCWNSMIVGCVVHGHMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKDLKNGESVHSL 408
V W +MI G +G +EA+ F +M + +++D + + SVL + + G+ +H+
Sbjct: 240 VSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHAC 299
Query: 409 IIKTGFDACKTVSNALVDMYAKQGNLSCALEVFNKISDKDVISWTSLVTGYVHNGFHEKA 468
II+T F V +AL+DMY K L A VF+++ K+V+SWT++V GY G E+A
Sbjct: 300 IIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEA 359
Query: 469 LKLFCDMRIARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSVGSLLSAENSLITM 528
+K+F DM+ + +D D + + SACA ++ +E G Q H I S + ++ NSL+T+
Sbjct: 360 VKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTL 419
Query: 529 YAKCGCLEDAIRVFDSMENRNVISWTAIIVGYAQNGRGKDSLHFYDQMIVDGITPDPVTF 588
Y KCG ++D+ R+F+ M R+ +SWTA++ YAQ GR +++ +D+M+ G+ PD VT
Sbjct: 420 YGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTL 479
Query: 589 IGLLFACSHAGLVETGRSYFESMEKVYGIKPASDHYACMIDLLGRAGKLNEAEDLLNRME 648
G++ ACS AGLVE G+ YF+ M YGI P+ HY+CMIDL R+G+L EA +N M
Sbjct: 480 TGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMP 539
Query: 649 VEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAH 708
PDA W +LLSACR GNLE+G+ A ++LI+L+P + Y LLS++++ G+W+ A
Sbjct: 540 FPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQ 599
Query: 709 IRRSMKTLGINKEPGYSWIETKSQVHTFISEDRSHPLSAEIYSKIDGIMILIKEAGHVPD 768
+RR M+ + KEPG SWI+ K ++H+F ++D S P +IY+K++ + I + G+ PD
Sbjct: 600 LRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPD 659
Query: 769 MNFALRDMDEEAKERSLAYHSEKLAVAFGLLTVPKGAPIRIFKNLRVCGDCHSAMKYISS 826
+F D++E K + L YHSE+LA+AFGL+ VP G PIR+ KNLRVC DCH+A K+ISS
Sbjct: 660 TSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISS 719
BLAST of Lsi01G019470 vs. ExPASy Swiss-Prot
Match:
Q9FIB2 (Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H35 PE=3 SV=1)
HSP 1 Score: 519.6 bits (1337), Expect = 6.4e-146
Identity = 265/648 (40.90%), Postives = 403/648 (62.19%), Query Frame = 0
Query: 185 NIMISAYANLGNLVEARKLFNETPTKNSITWSSLVSGYCKNGCEVEGLRLFSQMWSEGQK 244
N +++ YA G++ +AR++F K+S++W+S+++G +NGC +E + + M
Sbjct: 353 NGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDIL 412
Query: 245 PSQYTLGSVLRACSTLGLLHSGKIIHCYVHGCIIWSGFGANVYVQSALVDMYAKCGDLAS 304
P +TL S L +C++L G+ +HG + G NV V +AL+ +YA+ G L
Sbjct: 413 PGSFTLISSLSSCASLKWAKLGQ----QIHGESLKLGIDLNVSVSNALMTLYAETGYLNE 472
Query: 305 ARMILNIMEIDDVVCWNSMIVGCVVHGH--MEEALVLFHKMHNRDIRIDDFTYPSVLKSL 364
R I + M D V WNS I+G + + EA+V F +++ T+ SVL ++
Sbjct: 473 CRKIFSSMPEHDQVSWNS-IIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAV 532
Query: 365 ASCKDLKNGESVHSLIIKTGFDACKTVSNALVDMYAKQGNLSCALEVFNKISD-KDVISW 424
+S + G+ +H L +K T NAL+ Y K G + ++F+++++ +D ++W
Sbjct: 533 SSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTW 592
Query: 425 TSLVTGYVHNGFHEKALKLFCDMRIARVDLDQFVVACVFSACAELTVIEFGRQVHANFIK 484
S+++GY+HN KAL L M LD F+ A V SA A + +E G +VHA ++
Sbjct: 593 NSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVR 652
Query: 485 SSVGSLLSAENSLITMYAKCGCLEDAIRVFDSMENRNVISWTAIIVGYAQNGRGKDSLHF 544
+ + S + ++L+ MY+KCG L+ A+R F++M RN SW ++I GYA++G+G+++L
Sbjct: 653 ACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKL 712
Query: 545 YDQMIVDGIT-PDPVTFIGLLFACSHAGLVETGRSYFESMEKVYGIKPASDHYACMIDLL 604
++ M +DG T PD VTF+G+L ACSHAGL+E G +FESM YG+ P +H++CM D+L
Sbjct: 713 FETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVL 772
Query: 605 GRAGKLNEAEDLLNRMEVEPDATIWKSLLSA-CRVHG-NLELGERAGKNLIKLEPSNSLP 664
GRAG+L++ ED + +M ++P+ IW+++L A CR +G ELG++A + L +LEP N++
Sbjct: 773 GRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVN 832
Query: 665 YVLLSNMFSVAGRWEDAAHIRRSMKTLGINKEPGYSWIETKSQVHTFISEDRSHPLSAEI 724
YVLL NM++ GRWED R+ MK + KE GYSW+ K VH F++ D+SHP + I
Sbjct: 833 YVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVI 892
Query: 725 YSKIDGIMILIKEAGHVPDMNFALRDMDEEAKERSLAYHSEKLAVAFGLLTVPKGA-PIR 784
Y K+ + +++AG+VP FAL D+++E KE L+YHSEKLAVAF L PIR
Sbjct: 893 YKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIR 952
Query: 785 IFKNLRVCGDCHSAMKYISSVFKRHIILRDLNCFHHFIEGKCSCGDFW 826
I KNLRVCGDCHSA KYIS + R IILRD N FHHF +G CSC DFW
Sbjct: 953 IMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
BLAST of Lsi01G019470 vs. ExPASy TrEMBL
Match:
A0A1S3B568 (putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486132 PE=3 SV=1)
HSP 1 Score: 1295.4 bits (3351), Expect = 0.0e+00
Identity = 650/803 (80.95%), Postives = 677/803 (84.31%), Query Frame = 0
Query: 121 TSNSFTKCYFHFKHPVFIRCIGNIVYYSSNPVSNQLLSELSKDGRVDDARKLFDQMPDRD 180
TSN KC FHFK +FIRCI +I +YSSN VSNQLLSELSK+GRVD+ARKLFDQMP RD
Sbjct: 8 TSN---KCNFHFKLTLFIRCIHDIAHYSSNVVSNQLLSELSKNGRVDEARKLFDQMPYRD 67
Query: 181 KYSWNIMISAYANLGNLVEARKLFNETPTKNSITWSSLVSGYCKNGCEVEGLRLFSQMWS 240
KY+WNIMISAYANLGNLVEAR+LF+ETP KNSITWS+LVSGYCKNGCEVEGLRLFSQMWS
Sbjct: 68 KYTWNIMISAYANLGNLVEARRLFSETPIKNSITWSTLVSGYCKNGCEVEGLRLFSQMWS 127
Query: 241 EGQKPSQYTLGSVLRACSTLGLLHSGKIIHCY---------------------------- 300
+GQKPSQYTLGSVLRACSTL LLHSGK+IHCY
Sbjct: 128 DGQKPSQYTLGSVLRACSTLSLLHSGKMIHCYAIKIQLEENIFVATGLVDMYSKCKCLLE 187
Query: 301 ------------------------------------------------------------ 360
Sbjct: 188 AEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRIQGMESNHFTFPSILTACT 247
Query: 361 ----------VHGCIIWSGFGANVYVQSALVDMYAKCGDLASARMILNIMEIDDVVCWNS 420
VHGCIIWSGFG NVYVQSALVDMYAKCGDLASAR+ILN MEIDDVVCWNS
Sbjct: 248 SISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARVILNTMEIDDVVCWNS 307
Query: 421 MIVGCVVHGHMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKDLKNGESVHSLIIKTG 480
MIVGCV HG+MEEALVLFHKMHNRDIRIDDFTYPS LKSLAS K+LK G+SVHSLIIKTG
Sbjct: 308 MIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSALKSLASSKNLKIGQSVHSLIIKTG 367
Query: 481 FDACKTVSNALVDMYAKQGNLSCALEVFNKISDKDVISWTSLVTGYVHNGFHEKALKLFC 540
FDACKTVSNALVDMYAKQGNLSCAL+VFN+I DKDVISWTSLVTGYVHNGFHEKALKLFC
Sbjct: 368 FDACKTVSNALVDMYAKQGNLSCALDVFNRILDKDVISWTSLVTGYVHNGFHEKALKLFC 427
Query: 541 DMRIARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSVGSLLSAENSLITMYAKCG 600
DMRIARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSVGSLLSAENSLITMYAKCG
Sbjct: 428 DMRIARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSVGSLLSAENSLITMYAKCG 487
Query: 601 CLEDAIRVFDSMENRNVISWTAIIVGYAQNGRGKDSLHFYDQMIVDGITPDPVTFIGLLF 660
CLEDAIRVFDSME RNVISWTAIIVGYAQNGRGKDSLHFYDQMI++GI PD VTFIGLLF
Sbjct: 488 CLEDAIRVFDSMEIRNVISWTAIIVGYAQNGRGKDSLHFYDQMIMNGIKPDDVTFIGLLF 547
Query: 661 ACSHAGLVETGRSYFESMEKVYGIKPASDHYACMIDLLGRAGKLNEAEDLLNRMEVEPDA 720
ACSHAGLVETG+SYFESMEKVYGIKPASDHYACMIDLLGRAGKLNEAE LLNRM+VEPDA
Sbjct: 548 ACSHAGLVETGQSYFESMEKVYGIKPASDHYACMIDLLGRAGKLNEAEHLLNRMDVEPDA 607
Query: 721 TIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRSM 780
TIWKSLLSACRVHGNLELGERAG+NLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIR +M
Sbjct: 608 TIWKSLLSACRVHGNLELGERAGRNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRIAM 667
Query: 781 KTLGINKEPGYSWIETKSQVHTFISEDRSHPLSAEIYSKIDGIMILIKEAGHVPDMNFAL 826
KT+GINKEPGYSWIE KSQVH FISEDRSHPL+AEIYSKID +MILIKEAGHVPDMNFAL
Sbjct: 668 KTMGINKEPGYSWIEVKSQVHRFISEDRSHPLAAEIYSKIDEMMILIKEAGHVPDMNFAL 727
BLAST of Lsi01G019470 vs. ExPASy TrEMBL
Match:
A0A6J1HV89 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111467160 PE=3 SV=1)
HSP 1 Score: 1270.8 bits (3287), Expect = 0.0e+00
Identity = 636/803 (79.20%), Postives = 663/803 (82.57%), Query Frame = 0
Query: 121 TSNSFTKCYFHFKHPVFIRCIGNIVYYSSNPVSNQLLSELSKDGRVDDARKLFDQMPDRD 180
TSNSFTKC+ RCI N+VY SSN VSNQ LSELSKDGRVD+ARKLFD M RD
Sbjct: 34 TSNSFTKCF-------XFRCIHNLVYDSSNFVSNQRLSELSKDGRVDEARKLFDHMSYRD 93
Query: 181 KYSWNIMISAYANLGNLVEARKLFNETPTKNSITWSSLVSGYCKNGCEVEGLRLFSQMWS 240
Y+WNIMISAYAN N+VEARKLF+ETPTKNSITWSSLVSGYCKNGCEVEGLRLFSQMWS
Sbjct: 94 TYTWNIMISAYANSRNMVEARKLFDETPTKNSITWSSLVSGYCKNGCEVEGLRLFSQMWS 153
Query: 241 EGQKPSQYTLGSVLRACSTLGLLHSGKIIHCY---------------------------- 300
EGQKPSQYTLGSVLRACSTLGLLHSGK+IH Y
Sbjct: 154 EGQKPSQYTLGSVLRACSTLGLLHSGKMIHGYVIKIQLEANIFVATGLVDMYSKCKCLLE 213
Query: 301 ------------------------------------------------------------ 360
Sbjct: 214 AEYLFVSLSDRKNYVLSTAMLTGYAQNGESLKAMQCFKEMRIQGMESNHFTFPSILTACT 273
Query: 361 ----------VHGCIIWSGFGANVYVQSALVDMYAKCGDLASARMILNIMEIDDVVCWNS 420
VHGCII SGFGANVYVQSALVDMYAKCGDL SARM+LNIMEIDDVVCWNS
Sbjct: 274 AISAYSFGQQVHGCIILSGFGANVYVQSALVDMYAKCGDLNSARMLLNIMEIDDVVCWNS 333
Query: 421 MIVGCVVHGHMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKDLKNGESVHSLIIKTG 480
MIVGCV HGHMEEALVLFHKMHNRDI IDDFTYPSVLKSL +C+DLKNGESVHSLI+KTG
Sbjct: 334 MIVGCVTHGHMEEALVLFHKMHNRDIVIDDFTYPSVLKSLGTCRDLKNGESVHSLIMKTG 393
Query: 481 FDACKTVSNALVDMYAKQGNLSCALEVFNKISDKDVISWTSLVTGYVHNGFHEKALKLFC 540
FDACKTVSNALVDMYAKQGNL+CALEVFNKISDKDVISWTSLVTGYVHNGFHEKALKLFC
Sbjct: 394 FDACKTVSNALVDMYAKQGNLNCALEVFNKISDKDVISWTSLVTGYVHNGFHEKALKLFC 453
Query: 541 DMRIARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSVGSLLSAENSLITMYAKCG 600
DMRIA VDLDQFV+ACVFSACAELT+IEFGRQVH NFIKSSVGSLLSAENSLITMYAKCG
Sbjct: 454 DMRIAGVDLDQFVIACVFSACAELTIIEFGRQVHGNFIKSSVGSLLSAENSLITMYAKCG 513
Query: 601 CLEDAIRVFDSMENRNVISWTAIIVGYAQNGRGKDSLHFYDQMIVDGITPDPVTFIGLLF 660
CLEDA RVFDSME RNVISWTAIIVGYAQNGRGKDSLHFYD+MI+DG+ PDPVTFIGLLF
Sbjct: 514 CLEDATRVFDSMETRNVISWTAIIVGYAQNGRGKDSLHFYDRMIIDGVKPDPVTFIGLLF 573
Query: 661 ACSHAGLVETGRSYFESMEKVYGIKPASDHYACMIDLLGRAGKLNEAEDLLNRMEVEPDA 720
ACSHAGLVETGRSYFESMEKVYGIKP SDHYACMIDLLGRAGKLNEAE+LLNRM+VEPDA
Sbjct: 574 ACSHAGLVETGRSYFESMEKVYGIKPGSDHYACMIDLLGRAGKLNEAEELLNRMDVEPDA 633
Query: 721 TIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRSM 780
T+WKSLLSACRVHGNLELGERAGKNLIKLEP NSLPYVLLSNMFSVAGRWEDA HIR SM
Sbjct: 634 TVWKSLLSACRVHGNLELGERAGKNLIKLEPLNSLPYVLLSNMFSVAGRWEDATHIRNSM 693
Query: 781 KTLGINKEPGYSWIETKSQVHTFISEDRSHPLSAEIYSKIDGIMILIKEAGHVPDMNFAL 826
K +GINKEPGYSWIE KSQVH+FISEDRSHP++AEIYSKID +MILIKEAG+VPDMNFAL
Sbjct: 694 KRMGINKEPGYSWIEMKSQVHSFISEDRSHPMAAEIYSKIDEMMILIKEAGYVPDMNFAL 753
BLAST of Lsi01G019470 vs. ExPASy TrEMBL
Match:
A0A6J1D1V5 (pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111016249 PE=3 SV=1)
HSP 1 Score: 1270.4 bits (3286), Expect = 0.0e+00
Identity = 629/803 (78.33%), Postives = 669/803 (83.31%), Query Frame = 0
Query: 121 TSNSFTKCYFHFKHPVFIRCIGNIVYYSSNPVSNQLLSELSKDGRVDDARKLFDQMPDRD 180
TSNSFT+ YFHF++PVFIR I NIV YSSN VSNQLLSELSKDGRVDDARKLFD+MP RD
Sbjct: 8 TSNSFTERYFHFRYPVFIRYICNIVNYSSNLVSNQLLSELSKDGRVDDARKLFDKMPHRD 67
Query: 181 KYSWNIMISAYANLGNLVEARKLFNETPTKNSITWSSLVSGYCKNGCEVEGLRLFSQMWS 240
KYSWNIMISAYAN GNLVEARKLF+ETPTKNSITWSSLVSGYC++GCEVEGLRLFSQMWS
Sbjct: 68 KYSWNIMISAYANKGNLVEARKLFHETPTKNSITWSSLVSGYCRHGCEVEGLRLFSQMWS 127
Query: 241 EGQKPSQYTLGSVLRACSTLGLLHSGKIIHCY---------------------------- 300
+GQKPSQYTLGSVLRACST+GLLH GK+IHCY
Sbjct: 128 KGQKPSQYTLGSVLRACSTMGLLHGGKMIHCYVIKNQLEANIFVATGLVDMYSKCKCLLE 187
Query: 301 ------------------------------------------------------------ 360
Sbjct: 188 AEYLFLSLPDRRNYVLWTAMLTGYAQNGDSLKAIQCFKEMRILGIDSNQFTFPSILTACA 247
Query: 361 ----------VHGCIIWSGFGANVYVQSALVDMYAKCGDLASARMILNIMEIDDVVCWNS 420
VHGCI+WSGFGANV+VQSALVDMYAKCGDL SARM+L+IMEIDDVVCWNS
Sbjct: 248 AISAYTFGLQVHGCIVWSGFGANVFVQSALVDMYAKCGDLNSARMVLDIMEIDDVVCWNS 307
Query: 421 MIVGCVVHGHMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKDLKNGESVHSLIIKTG 480
MIVGCV G+ EEALVLFHKMH+RD+RIDDFT+PS+L SLASC DLK GESVHSLIIKTG
Sbjct: 308 MIVGCVAQGYTEEALVLFHKMHDRDMRIDDFTFPSILNSLASCGDLKKGESVHSLIIKTG 367
Query: 481 FDACKTVSNALVDMYAKQGNLSCALEVFNKISDKDVISWTSLVTGYVHNGFHEKALKLFC 540
FDAC+TVSNALVDMY+KQGNL CA EVFNKI DKDVISWTSLVTGYVHNGFHEKALKLFC
Sbjct: 368 FDACRTVSNALVDMYSKQGNLGCAFEVFNKIPDKDVISWTSLVTGYVHNGFHEKALKLFC 427
Query: 541 DMRIARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSVGSLLSAENSLITMYAKCG 600
DMRIA V LDQFVVACVFSACAELTVIEFGRQVHA+FIK+SVGSLLSAENSL+TMYAKCG
Sbjct: 428 DMRIAGVALDQFVVACVFSACAELTVIEFGRQVHADFIKTSVGSLLSAENSLVTMYAKCG 487
Query: 601 CLEDAIRVFDSMENRNVISWTAIIVGYAQNGRGKDSLHFYDQMIVDGITPDPVTFIGLLF 660
CLEDA RVFDSM NRNVISWTAIIVGYAQNGRGKDSLHFYDQMI++GI PDPVTFIGLLF
Sbjct: 488 CLEDATRVFDSMLNRNVISWTAIIVGYAQNGRGKDSLHFYDQMIINGIKPDPVTFIGLLF 547
Query: 661 ACSHAGLVETGRSYFESMEKVYGIKPASDHYACMIDLLGRAGKLNEAEDLLNRMEVEPDA 720
ACSHAGLVETGRSYF+SMEKVYGIKPA DHYACMIDLLGRAGKL+EAEDLLN+MEVEPDA
Sbjct: 548 ACSHAGLVETGRSYFDSMEKVYGIKPAPDHYACMIDLLGRAGKLSEAEDLLNQMEVEPDA 607
Query: 721 TIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRSM 780
T+WKSLLSACRVHGNLELGERAG+NLIKLEP NSLPYVLLSNMFSVAGRWED A IR+ M
Sbjct: 608 TLWKSLLSACRVHGNLELGERAGRNLIKLEPLNSLPYVLLSNMFSVAGRWEDVAQIRKLM 667
Query: 781 KTLGINKEPGYSWIETKSQVHTFISEDRSHPLSAEIYSKIDGIMILIKEAGHVPDMNFAL 826
KT+GINKEPG SWIE KSQVHTFISEDRSHP++ EIYSKID +MILIKEAG+VPDMNFAL
Sbjct: 668 KTMGINKEPGCSWIEMKSQVHTFISEDRSHPMTVEIYSKIDEMMILIKEAGYVPDMNFAL 727
BLAST of Lsi01G019470 vs. ExPASy TrEMBL
Match:
A0A6J1EPT9 (pentatricopeptide repeat-containing protein At2g03880, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435533 PE=3 SV=1)
HSP 1 Score: 1248.4 bits (3229), Expect = 0.0e+00
Identity = 624/785 (79.49%), Postives = 649/785 (82.68%), Query Frame = 0
Query: 139 RCIGNIVYYSSNPVSNQLLSELSKDGRVDDARKLFDQMPDRDKYSWNIMISAYANLGNLV 198
R I N VY SSN VSNQ LSELSKDGRVD+ARKLFD MP RD Y+WNIMISAYAN N+V
Sbjct: 31 RFIHNFVYDSSNFVSNQRLSELSKDGRVDEARKLFDHMPYRDTYTWNIMISAYANSRNMV 90
Query: 199 EARKLFNETPTKNSITWSSLVSGYCKNGCEVEGLRLFSQMWSEGQKPSQYTLGSVLRACS 258
EARKLF+ETPTKNSITWSSLVSGYC+NGCEVEGLRLFSQMWSEGQKPSQYTLGSVLRACS
Sbjct: 91 EARKLFDETPTKNSITWSSLVSGYCRNGCEVEGLRLFSQMWSEGQKPSQYTLGSVLRACS 150
Query: 259 TLGLLHSGKIIHCY---------------------------------------------- 318
TLGLLHSGK+IH Y
Sbjct: 151 TLGLLHSGKMIHGYVTKIQLEANIFVATGLVDMYSKCKCLLEAEFLFVSLSDRKNYVLST 210
Query: 319 ----------------------------------------------------VHGCIIWS 378
VHGCII S
Sbjct: 211 AMLTGYAQNGESLKAMQCFKEMRIQKMESNHFTFPSILTACTAISAYSFGQQVHGCIILS 270
Query: 379 GFGANVYVQSALVDMYAKCGDLASARMILNIMEIDDVVCWNSMIVGCVVHGHMEEALVLF 438
GFGANVYVQSALVDMYAKCGDL SARM+LNIMEIDDVVCWNSMIVGCV HGHMEEALVLF
Sbjct: 271 GFGANVYVQSALVDMYAKCGDLNSARMLLNIMEIDDVVCWNSMIVGCVAHGHMEEALVLF 330
Query: 439 HKMHNRDIRIDDFTYPSVLKSLASCKDLKNGESVHSLIIKTGFDACKTVSNALVDMYAKQ 498
HKMHNRD IDDFTYPSVLKSL +C+DLKNGESVHSLI+KTGFDACKTVSNALVDMYAKQ
Sbjct: 331 HKMHNRDTVIDDFTYPSVLKSLGTCRDLKNGESVHSLIMKTGFDACKTVSNALVDMYAKQ 390
Query: 499 GNLSCALEVFNKISDKDVISWTSLVTGYVHNGFHEKALKLFCDMRIARVDLDQFVVACVF 558
GNL+CALEVFNKISDKDVISWTSLVTGYVHNGFHEKALKLFCDMRIA VDLDQFV+ACVF
Sbjct: 391 GNLNCALEVFNKISDKDVISWTSLVTGYVHNGFHEKALKLFCDMRIAGVDLDQFVIACVF 450
Query: 559 SACAELTVIEFGRQVHANFIKSSVGSLLSAENSLITMYAKCGCLEDAIRVFDSMENRNVI 618
SACAELT+IEFGRQVH NFIKSSVGSLLSAENSLITMYAKCGCLEDA RVFDSM RNVI
Sbjct: 451 SACAELTIIEFGRQVHGNFIKSSVGSLLSAENSLITMYAKCGCLEDATRVFDSMGTRNVI 510
Query: 619 SWTAIIVGYAQNGRGKDSLHFYDQMIVDGITPDPVTFIGLLFACSHAGLVETGRSYFESM 678
SWTAIIVGYAQNGRGKDSL FYD+MI+DG+ PDPVTFIGLLFACSHAGLVETGRSYFESM
Sbjct: 511 SWTAIIVGYAQNGRGKDSLRFYDRMIIDGVKPDPVTFIGLLFACSHAGLVETGRSYFESM 570
Query: 679 EKVYGIKPASDHYACMIDLLGRAGKLNEAEDLLNRMEVEPDATIWKSLLSACRVHGNLEL 738
EKVYGIKP SDHYACMIDLLGRAGKLNEAE+LLNRM+VEPDAT+WKSLLSACRVHGNLEL
Sbjct: 571 EKVYGIKPGSDHYACMIDLLGRAGKLNEAEELLNRMDVEPDATVWKSLLSACRVHGNLEL 630
Query: 739 GERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRSMKTLGINKEPGYSWIETKS 798
GERAGKNLIKLEP NSLPYVLLSNMFSVAGRWEDA HIR SMK +GINKEPGYSWIE KS
Sbjct: 631 GERAGKNLIKLEPLNSLPYVLLSNMFSVAGRWEDATHIRNSMKRMGINKEPGYSWIEMKS 690
Query: 799 QVHTFISEDRSHPLSAEIYSKIDGIMILIKEAGHVPDMNFALRDMDEEAKERSLAYHSEK 826
QVH+FISEDRSHPL+AEIYSKID +MILIKEAG+VP MNFAL DMDEEAKERSL YHSEK
Sbjct: 691 QVHSFISEDRSHPLAAEIYSKIDEMMILIKEAGYVPVMNFALHDMDEEAKERSLTYHSEK 750
BLAST of Lsi01G019470 vs. ExPASy TrEMBL
Match:
A0A6J1EL19 (pentatricopeptide repeat-containing protein At2g03880, mitochondrial isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435533 PE=3 SV=1)
HSP 1 Score: 1230.3 bits (3182), Expect = 0.0e+00
Identity = 612/767 (79.79%), Postives = 637/767 (83.05%), Query Frame = 0
Query: 157 LSELSKDGRVDDARKLFDQMPDRDKYSWNIMISAYANLGNLVEARKLFNETPTKNSITWS 216
LSELSKDGRVD+ARKLFD MP RD Y+WNIMISAYAN N+VEARKLF+ETPTKNSITWS
Sbjct: 3 LSELSKDGRVDEARKLFDHMPYRDTYTWNIMISAYANSRNMVEARKLFDETPTKNSITWS 62
Query: 217 SLVSGYCKNGCEVEGLRLFSQMWSEGQKPSQYTLGSVLRACSTLGLLHSGKIIHCY---- 276
SLVSGYC+NGCEVEGLRLFSQMWSEGQKPSQYTLGSVLRACSTLGLLHSGK+IH Y
Sbjct: 63 SLVSGYCRNGCEVEGLRLFSQMWSEGQKPSQYTLGSVLRACSTLGLLHSGKMIHGYVTKI 122
Query: 277 ------------------------------------------------------------ 336
Sbjct: 123 QLEANIFVATGLVDMYSKCKCLLEAEFLFVSLSDRKNYVLSTAMLTGYAQNGESLKAMQC 182
Query: 337 ----------------------------------VHGCIIWSGFGANVYVQSALVDMYAK 396
VHGCII SGFGANVYVQSALVDMYAK
Sbjct: 183 FKEMRIQKMESNHFTFPSILTACTAISAYSFGQQVHGCIILSGFGANVYVQSALVDMYAK 242
Query: 397 CGDLASARMILNIMEIDDVVCWNSMIVGCVVHGHMEEALVLFHKMHNRDIRIDDFTYPSV 456
CGDL SARM+LNIMEIDDVVCWNSMIVGCV HGHMEEALVLFHKMHNRD IDDFTYPSV
Sbjct: 243 CGDLNSARMLLNIMEIDDVVCWNSMIVGCVAHGHMEEALVLFHKMHNRDTVIDDFTYPSV 302
Query: 457 LKSLASCKDLKNGESVHSLIIKTGFDACKTVSNALVDMYAKQGNLSCALEVFNKISDKDV 516
LKSL +C+DLKNGESVHSLI+KTGFDACKTVSNALVDMYAKQGNL+CALEVFNKISDKDV
Sbjct: 303 LKSLGTCRDLKNGESVHSLIMKTGFDACKTVSNALVDMYAKQGNLNCALEVFNKISDKDV 362
Query: 517 ISWTSLVTGYVHNGFHEKALKLFCDMRIARVDLDQFVVACVFSACAELTVIEFGRQVHAN 576
ISWTSLVTGYVHNGFHEKALKLFCDMRIA VDLDQFV+ACVFSACAELT+IEFGRQVH N
Sbjct: 363 ISWTSLVTGYVHNGFHEKALKLFCDMRIAGVDLDQFVIACVFSACAELTIIEFGRQVHGN 422
Query: 577 FIKSSVGSLLSAENSLITMYAKCGCLEDAIRVFDSMENRNVISWTAIIVGYAQNGRGKDS 636
FIKSSVGSLLSAENSLITMYAKCGCLEDA RVFDSM RNVISWTAIIVGYAQNGRGKDS
Sbjct: 423 FIKSSVGSLLSAENSLITMYAKCGCLEDATRVFDSMGTRNVISWTAIIVGYAQNGRGKDS 482
Query: 637 LHFYDQMIVDGITPDPVTFIGLLFACSHAGLVETGRSYFESMEKVYGIKPASDHYACMID 696
L FYD+MI+DG+ PDPVTFIGLLFACSHAGLVETGRSYFESMEKVYGIKP SDHYACMID
Sbjct: 483 LRFYDRMIIDGVKPDPVTFIGLLFACSHAGLVETGRSYFESMEKVYGIKPGSDHYACMID 542
Query: 697 LLGRAGKLNEAEDLLNRMEVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLP 756
LLGRAGKLNEAE+LLNRM+VEPDAT+WKSLLSACRVHGNLELGERAGKNLIKLEP NSLP
Sbjct: 543 LLGRAGKLNEAEELLNRMDVEPDATVWKSLLSACRVHGNLELGERAGKNLIKLEPLNSLP 602
Query: 757 YVLLSNMFSVAGRWEDAAHIRRSMKTLGINKEPGYSWIETKSQVHTFISEDRSHPLSAEI 816
YVLLSNMFSVAGRWEDA HIR SMK +GINKEPGYSWIE KSQVH+FISEDRSHPL+AEI
Sbjct: 603 YVLLSNMFSVAGRWEDATHIRNSMKRMGINKEPGYSWIEMKSQVHSFISEDRSHPLAAEI 662
Query: 817 YSKIDGIMILIKEAGHVPDMNFALRDMDEEAKERSLAYHSEKLAVAFGLLTVPKGAPIRI 826
YSKID +MILIKEAG+VP MNFAL DMDEEAKERSL YHSEKLAVAFGLL VP GAPIRI
Sbjct: 663 YSKIDEMMILIKEAGYVPVMNFALHDMDEEAKERSLTYHSEKLAVAFGLLAVPNGAPIRI 722
BLAST of Lsi01G019470 vs. NCBI nr
Match:
XP_038883141.1 (putative pentatricopeptide repeat-containing protein At3g15130 [Benincasa hispida] >XP_038883142.1 putative pentatricopeptide repeat-containing protein At3g15130 [Benincasa hispida] >XP_038883143.1 putative pentatricopeptide repeat-containing protein At3g15130 [Benincasa hispida] >XP_038883144.1 putative pentatricopeptide repeat-containing protein At3g15130 [Benincasa hispida] >XP_038883145.1 putative pentatricopeptide repeat-containing protein At3g15130 [Benincasa hispida] >XP_038883146.1 putative pentatricopeptide repeat-containing protein At3g15130 [Benincasa hispida] >XP_038883147.1 putative pentatricopeptide repeat-containing protein At3g15130 [Benincasa hispida] >XP_038883148.1 putative pentatricopeptide repeat-containing protein At3g15130 [Benincasa hispida] >XP_038883149.1 putative pentatricopeptide repeat-containing protein At3g15130 [Benincasa hispida] >XP_038883150.1 putative pentatricopeptide repeat-containing protein At3g15130 [Benincasa hispida] >XP_038883153.1 putative pentatricopeptide repeat-containing protein At3g15130 [Benincasa hispida] >XP_038883154.1 putative pentatricopeptide repeat-containing protein At3g15130 [Benincasa hispida] >XP_038883155.1 putative pentatricopeptide repeat-containing protein At3g15130 [Benincasa hispida] >XP_038883156.1 putative pentatricopeptide repeat-containing protein At3g15130 [Benincasa hispida] >XP_038883157.1 putative pentatricopeptide repeat-containing protein At3g15130 [Benincasa hispida])
HSP 1 Score: 1349.7 bits (3492), Expect = 0.0e+00
Identity = 673/803 (83.81%), Postives = 689/803 (85.80%), Query Frame = 0
Query: 121 TSNSFTKCYFHFKHPVFIRCIGNIVYYSSNPVSNQLLSELSKDGRVDDARKLFDQMPDRD 180
TSNSFTKCYFHFKHPVF+RCI N+VYYSSNPVSNQLLSEL KDGRVD+ARK+FDQMP RD
Sbjct: 8 TSNSFTKCYFHFKHPVFLRCICNVVYYSSNPVSNQLLSELCKDGRVDEARKVFDQMPYRD 67
Query: 181 KYSWNIMISAYANLGNLVEARKLFNETPTKNSITWSSLVSGYCKNGCEVEGLRLFSQMWS 240
KY+WNIMISAYANLG+LVEARKLFN+TP KNSITWSSLVSGYCKNGCEVEGLRLFSQMWS
Sbjct: 68 KYTWNIMISAYANLGDLVEARKLFNDTPIKNSITWSSLVSGYCKNGCEVEGLRLFSQMWS 127
Query: 241 EGQKPSQYTLGSVLRACSTLGLLHSGKIIHCY---------------------------- 300
EGQKPSQYTLGSVLRACSTLGLLHSGK+IHCY
Sbjct: 128 EGQKPSQYTLGSVLRACSTLGLLHSGKMIHCYVIKTQLEANIFVATGLVDMYSKCKCLLE 187
Query: 301 ------------------------------------------------------------ 360
Sbjct: 188 AEYLFLSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRIRGIESNHFTFPSILTACT 247
Query: 361 ----------VHGCIIWSGFGANVYVQSALVDMYAKCGDLASARMILNIMEIDDVVCWNS 420
VHGCII SGFG NVYVQSALVDMYAKCGDLASARMILNIMEIDDVVCWNS
Sbjct: 248 AISAYAFGQQVHGCIILSGFGPNVYVQSALVDMYAKCGDLASARMILNIMEIDDVVCWNS 307
Query: 421 MIVGCVVHGHMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKDLKNGESVHSLIIKTG 480
MIVGCV HG++EEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKDLKNGESVHSLIIKTG
Sbjct: 308 MIVGCVAHGYLEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKDLKNGESVHSLIIKTG 367
Query: 481 FDACKTVSNALVDMYAKQGNLSCALEVFNKISDKDVISWTSLVTGYVHNGFHEKALKLFC 540
FDACKTVSNALVDMYAKQGNLSCALEVFNKISDKDVISWTSLVTGYVHNGFHEKALKLFC
Sbjct: 368 FDACKTVSNALVDMYAKQGNLSCALEVFNKISDKDVISWTSLVTGYVHNGFHEKALKLFC 427
Query: 541 DMRIARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSVGSLLSAENSLITMYAKCG 600
DMRIARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSVGSLLSAENSLITMYAKCG
Sbjct: 428 DMRIARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSVGSLLSAENSLITMYAKCG 487
Query: 601 CLEDAIRVFDSMENRNVISWTAIIVGYAQNGRGKDSLHFYDQMIVDGITPDPVTFIGLLF 660
CLEDAIRVFDSME RNVISWTAIIVGYAQNGRGKDSLHFY+QMI DGI PDPVTFIGLLF
Sbjct: 488 CLEDAIRVFDSMEIRNVISWTAIIVGYAQNGRGKDSLHFYEQMINDGIKPDPVTFIGLLF 547
Query: 661 ACSHAGLVETGRSYFESMEKVYGIKPASDHYACMIDLLGRAGKLNEAEDLLNRMEVEPDA 720
ACSHAGLVETGRSYFESMEKVYGIK A DHYACMIDLLGRAGKLNEAEDLLNRMEVEPDA
Sbjct: 548 ACSHAGLVETGRSYFESMEKVYGIKAAPDHYACMIDLLGRAGKLNEAEDLLNRMEVEPDA 607
Query: 721 TIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRSM 780
TIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRSM
Sbjct: 608 TIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRSM 667
Query: 781 KTLGINKEPGYSWIETKSQVHTFISEDRSHPLSAEIYSKIDGIMILIKEAGHVPDMNFAL 826
KT+GINKEPGYSWIE KSQVHTFISEDRSHPL+AEIY+KID +MILIKEAGHVPDMNFAL
Sbjct: 668 KTMGINKEPGYSWIEMKSQVHTFISEDRSHPLAAEIYAKIDEMMILIKEAGHVPDMNFAL 727
BLAST of Lsi01G019470 vs. NCBI nr
Match:
XP_011653924.1 (pentatricopeptide repeat-containing protein At2g03880, mitochondrial isoform X1 [Cucumis sativus] >XP_011653925.1 pentatricopeptide repeat-containing protein At2g03880, mitochondrial isoform X1 [Cucumis sativus] >XP_011653926.1 pentatricopeptide repeat-containing protein At2g03880, mitochondrial isoform X1 [Cucumis sativus] >XP_011653927.1 pentatricopeptide repeat-containing protein At2g03880, mitochondrial isoform X1 [Cucumis sativus] >XP_031740527.1 pentatricopeptide repeat-containing protein At2g03880, mitochondrial isoform X1 [Cucumis sativus] >XP_031740528.1 pentatricopeptide repeat-containing protein At2g03880, mitochondrial isoform X1 [Cucumis sativus] >XP_031740529.1 pentatricopeptide repeat-containing protein At2g03880, mitochondrial isoform X1 [Cucumis sativus] >XP_031740530.1 pentatricopeptide repeat-containing protein At2g03880, mitochondrial isoform X1 [Cucumis sativus] >KAE8649760.1 hypothetical protein Csa_012799 [Cucumis sativus])
HSP 1 Score: 1316.2 bits (3405), Expect = 0.0e+00
Identity = 656/803 (81.69%), Postives = 679/803 (84.56%), Query Frame = 0
Query: 121 TSNSFTKCYFHFKHPVFIRCIGNIVYYSSNPVSNQLLSELSKDGRVDDARKLFDQMPDRD 180
TSN FTKC FHFKHP+FIRCI I +YSSN SNQLLSELSK+GRVD+ARKLFDQMP RD
Sbjct: 8 TSNFFTKCNFHFKHPLFIRCIHGIAHYSSNLDSNQLLSELSKNGRVDEARKLFDQMPYRD 67
Query: 181 KYSWNIMISAYANLGNLVEARKLFNETPTKNSITWSSLVSGYCKNGCEVEGLRLFSQMWS 240
KY+WNIMISAYANLGNLVEARKLFNETP KNSITWSSLVSGYCKNGCEVEGLR FSQMWS
Sbjct: 68 KYTWNIMISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQMWS 127
Query: 241 EGQKPSQYTLGSVLRACSTLGLLHSGKIIHCY---------------------------- 300
+GQKPSQYTLGSVLRACSTL LLH+GK+IHCY
Sbjct: 128 DGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLE 187
Query: 301 ------------------------------------------------------------ 360
Sbjct: 188 AEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACT 247
Query: 361 ----------VHGCIIWSGFGANVYVQSALVDMYAKCGDLASARMILNIMEIDDVVCWNS 420
VHGCIIWSGFG NVYVQSALVDMYAKCGDLASARMIL+ MEIDDVVCWNS
Sbjct: 248 SISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNS 307
Query: 421 MIVGCVVHGHMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKDLKNGESVHSLIIKTG 480
MIVGCV HG+MEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCK+LK GESVHSL IKTG
Sbjct: 308 MIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTG 367
Query: 481 FDACKTVSNALVDMYAKQGNLSCALEVFNKISDKDVISWTSLVTGYVHNGFHEKALKLFC 540
FDACKTVSNALVDMYAKQGNLSCAL+VFNKI DKDVISWTSLVTGYVHNGFHEKAL+LFC
Sbjct: 368 FDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFC 427
Query: 541 DMRIARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSVGSLLSAENSLITMYAKCG 600
DMR ARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSS GSLLSAENSLITMYAKCG
Sbjct: 428 DMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCG 487
Query: 601 CLEDAIRVFDSMENRNVISWTAIIVGYAQNGRGKDSLHFYDQMIVDGITPDPVTFIGLLF 660
CLEDAIRVFDSME RNVISWTAIIVGYAQNGRGKDSLHFY+QMI+DGI PD VTFIGLLF
Sbjct: 488 CLEDAIRVFDSMETRNVISWTAIIVGYAQNGRGKDSLHFYEQMIIDGIKPDGVTFIGLLF 547
Query: 661 ACSHAGLVETGRSYFESMEKVYGIKPASDHYACMIDLLGRAGKLNEAEDLLNRMEVEPDA 720
ACSHAGLVETG+SYFESMEKVYGIKPASDHYACMIDLLGRAGK+NEAE LLNRM+VEPDA
Sbjct: 548 ACSHAGLVETGQSYFESMEKVYGIKPASDHYACMIDLLGRAGKINEAEHLLNRMDVEPDA 607
Query: 721 TIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRSM 780
TIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRR+M
Sbjct: 608 TIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAM 667
Query: 781 KTLGINKEPGYSWIETKSQVHTFISEDRSHPLSAEIYSKIDGIMILIKEAGHVPDMNFAL 826
KT+GINKEPGYSWIE KSQVHTFISEDRSHPL+AEIYSKID +MILIKEAGHVPDMNFAL
Sbjct: 668 KTMGINKEPGYSWIEMKSQVHTFISEDRSHPLAAEIYSKIDEMMILIKEAGHVPDMNFAL 727
BLAST of Lsi01G019470 vs. NCBI nr
Match:
XP_008442211.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial isoform X1 [Cucumis melo] >XP_008442212.1 PREDICTED: putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial isoform X1 [Cucumis melo] >XP_008442213.1 PREDICTED: putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial isoform X1 [Cucumis melo] >XP_016899536.1 PREDICTED: putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial isoform X1 [Cucumis melo] >XP_016899537.1 PREDICTED: putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial isoform X1 [Cucumis melo])
HSP 1 Score: 1295.4 bits (3351), Expect = 0.0e+00
Identity = 650/803 (80.95%), Postives = 677/803 (84.31%), Query Frame = 0
Query: 121 TSNSFTKCYFHFKHPVFIRCIGNIVYYSSNPVSNQLLSELSKDGRVDDARKLFDQMPDRD 180
TSN KC FHFK +FIRCI +I +YSSN VSNQLLSELSK+GRVD+ARKLFDQMP RD
Sbjct: 8 TSN---KCNFHFKLTLFIRCIHDIAHYSSNVVSNQLLSELSKNGRVDEARKLFDQMPYRD 67
Query: 181 KYSWNIMISAYANLGNLVEARKLFNETPTKNSITWSSLVSGYCKNGCEVEGLRLFSQMWS 240
KY+WNIMISAYANLGNLVEAR+LF+ETP KNSITWS+LVSGYCKNGCEVEGLRLFSQMWS
Sbjct: 68 KYTWNIMISAYANLGNLVEARRLFSETPIKNSITWSTLVSGYCKNGCEVEGLRLFSQMWS 127
Query: 241 EGQKPSQYTLGSVLRACSTLGLLHSGKIIHCY---------------------------- 300
+GQKPSQYTLGSVLRACSTL LLHSGK+IHCY
Sbjct: 128 DGQKPSQYTLGSVLRACSTLSLLHSGKMIHCYAIKIQLEENIFVATGLVDMYSKCKCLLE 187
Query: 301 ------------------------------------------------------------ 360
Sbjct: 188 AEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRIQGMESNHFTFPSILTACT 247
Query: 361 ----------VHGCIIWSGFGANVYVQSALVDMYAKCGDLASARMILNIMEIDDVVCWNS 420
VHGCIIWSGFG NVYVQSALVDMYAKCGDLASAR+ILN MEIDDVVCWNS
Sbjct: 248 SISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARVILNTMEIDDVVCWNS 307
Query: 421 MIVGCVVHGHMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKDLKNGESVHSLIIKTG 480
MIVGCV HG+MEEALVLFHKMHNRDIRIDDFTYPS LKSLAS K+LK G+SVHSLIIKTG
Sbjct: 308 MIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSALKSLASSKNLKIGQSVHSLIIKTG 367
Query: 481 FDACKTVSNALVDMYAKQGNLSCALEVFNKISDKDVISWTSLVTGYVHNGFHEKALKLFC 540
FDACKTVSNALVDMYAKQGNLSCAL+VFN+I DKDVISWTSLVTGYVHNGFHEKALKLFC
Sbjct: 368 FDACKTVSNALVDMYAKQGNLSCALDVFNRILDKDVISWTSLVTGYVHNGFHEKALKLFC 427
Query: 541 DMRIARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSVGSLLSAENSLITMYAKCG 600
DMRIARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSVGSLLSAENSLITMYAKCG
Sbjct: 428 DMRIARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSVGSLLSAENSLITMYAKCG 487
Query: 601 CLEDAIRVFDSMENRNVISWTAIIVGYAQNGRGKDSLHFYDQMIVDGITPDPVTFIGLLF 660
CLEDAIRVFDSME RNVISWTAIIVGYAQNGRGKDSLHFYDQMI++GI PD VTFIGLLF
Sbjct: 488 CLEDAIRVFDSMEIRNVISWTAIIVGYAQNGRGKDSLHFYDQMIMNGIKPDDVTFIGLLF 547
Query: 661 ACSHAGLVETGRSYFESMEKVYGIKPASDHYACMIDLLGRAGKLNEAEDLLNRMEVEPDA 720
ACSHAGLVETG+SYFESMEKVYGIKPASDHYACMIDLLGRAGKLNEAE LLNRM+VEPDA
Sbjct: 548 ACSHAGLVETGQSYFESMEKVYGIKPASDHYACMIDLLGRAGKLNEAEHLLNRMDVEPDA 607
Query: 721 TIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRSM 780
TIWKSLLSACRVHGNLELGERAG+NLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIR +M
Sbjct: 608 TIWKSLLSACRVHGNLELGERAGRNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRIAM 667
Query: 781 KTLGINKEPGYSWIETKSQVHTFISEDRSHPLSAEIYSKIDGIMILIKEAGHVPDMNFAL 826
KT+GINKEPGYSWIE KSQVH FISEDRSHPL+AEIYSKID +MILIKEAGHVPDMNFAL
Sbjct: 668 KTMGINKEPGYSWIEVKSQVHRFISEDRSHPLAAEIYSKIDEMMILIKEAGHVPDMNFAL 727
BLAST of Lsi01G019470 vs. NCBI nr
Match:
XP_022967715.1 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like [Cucurbita maxima])
HSP 1 Score: 1270.8 bits (3287), Expect = 0.0e+00
Identity = 636/803 (79.20%), Postives = 663/803 (82.57%), Query Frame = 0
Query: 121 TSNSFTKCYFHFKHPVFIRCIGNIVYYSSNPVSNQLLSELSKDGRVDDARKLFDQMPDRD 180
TSNSFTKC+ RCI N+VY SSN VSNQ LSELSKDGRVD+ARKLFD M RD
Sbjct: 34 TSNSFTKCF-------XFRCIHNLVYDSSNFVSNQRLSELSKDGRVDEARKLFDHMSYRD 93
Query: 181 KYSWNIMISAYANLGNLVEARKLFNETPTKNSITWSSLVSGYCKNGCEVEGLRLFSQMWS 240
Y+WNIMISAYAN N+VEARKLF+ETPTKNSITWSSLVSGYCKNGCEVEGLRLFSQMWS
Sbjct: 94 TYTWNIMISAYANSRNMVEARKLFDETPTKNSITWSSLVSGYCKNGCEVEGLRLFSQMWS 153
Query: 241 EGQKPSQYTLGSVLRACSTLGLLHSGKIIHCY---------------------------- 300
EGQKPSQYTLGSVLRACSTLGLLHSGK+IH Y
Sbjct: 154 EGQKPSQYTLGSVLRACSTLGLLHSGKMIHGYVIKIQLEANIFVATGLVDMYSKCKCLLE 213
Query: 301 ------------------------------------------------------------ 360
Sbjct: 214 AEYLFVSLSDRKNYVLSTAMLTGYAQNGESLKAMQCFKEMRIQGMESNHFTFPSILTACT 273
Query: 361 ----------VHGCIIWSGFGANVYVQSALVDMYAKCGDLASARMILNIMEIDDVVCWNS 420
VHGCII SGFGANVYVQSALVDMYAKCGDL SARM+LNIMEIDDVVCWNS
Sbjct: 274 AISAYSFGQQVHGCIILSGFGANVYVQSALVDMYAKCGDLNSARMLLNIMEIDDVVCWNS 333
Query: 421 MIVGCVVHGHMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKDLKNGESVHSLIIKTG 480
MIVGCV HGHMEEALVLFHKMHNRDI IDDFTYPSVLKSL +C+DLKNGESVHSLI+KTG
Sbjct: 334 MIVGCVTHGHMEEALVLFHKMHNRDIVIDDFTYPSVLKSLGTCRDLKNGESVHSLIMKTG 393
Query: 481 FDACKTVSNALVDMYAKQGNLSCALEVFNKISDKDVISWTSLVTGYVHNGFHEKALKLFC 540
FDACKTVSNALVDMYAKQGNL+CALEVFNKISDKDVISWTSLVTGYVHNGFHEKALKLFC
Sbjct: 394 FDACKTVSNALVDMYAKQGNLNCALEVFNKISDKDVISWTSLVTGYVHNGFHEKALKLFC 453
Query: 541 DMRIARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSVGSLLSAENSLITMYAKCG 600
DMRIA VDLDQFV+ACVFSACAELT+IEFGRQVH NFIKSSVGSLLSAENSLITMYAKCG
Sbjct: 454 DMRIAGVDLDQFVIACVFSACAELTIIEFGRQVHGNFIKSSVGSLLSAENSLITMYAKCG 513
Query: 601 CLEDAIRVFDSMENRNVISWTAIIVGYAQNGRGKDSLHFYDQMIVDGITPDPVTFIGLLF 660
CLEDA RVFDSME RNVISWTAIIVGYAQNGRGKDSLHFYD+MI+DG+ PDPVTFIGLLF
Sbjct: 514 CLEDATRVFDSMETRNVISWTAIIVGYAQNGRGKDSLHFYDRMIIDGVKPDPVTFIGLLF 573
Query: 661 ACSHAGLVETGRSYFESMEKVYGIKPASDHYACMIDLLGRAGKLNEAEDLLNRMEVEPDA 720
ACSHAGLVETGRSYFESMEKVYGIKP SDHYACMIDLLGRAGKLNEAE+LLNRM+VEPDA
Sbjct: 574 ACSHAGLVETGRSYFESMEKVYGIKPGSDHYACMIDLLGRAGKLNEAEELLNRMDVEPDA 633
Query: 721 TIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRSM 780
T+WKSLLSACRVHGNLELGERAGKNLIKLEP NSLPYVLLSNMFSVAGRWEDA HIR SM
Sbjct: 634 TVWKSLLSACRVHGNLELGERAGKNLIKLEPLNSLPYVLLSNMFSVAGRWEDATHIRNSM 693
Query: 781 KTLGINKEPGYSWIETKSQVHTFISEDRSHPLSAEIYSKIDGIMILIKEAGHVPDMNFAL 826
K +GINKEPGYSWIE KSQVH+FISEDRSHP++AEIYSKID +MILIKEAG+VPDMNFAL
Sbjct: 694 KRMGINKEPGYSWIEMKSQVHSFISEDRSHPMAAEIYSKIDEMMILIKEAGYVPDMNFAL 753
BLAST of Lsi01G019470 vs. NCBI nr
Match:
XP_022147252.1 (pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Momordica charantia])
HSP 1 Score: 1270.4 bits (3286), Expect = 0.0e+00
Identity = 629/803 (78.33%), Postives = 669/803 (83.31%), Query Frame = 0
Query: 121 TSNSFTKCYFHFKHPVFIRCIGNIVYYSSNPVSNQLLSELSKDGRVDDARKLFDQMPDRD 180
TSNSFT+ YFHF++PVFIR I NIV YSSN VSNQLLSELSKDGRVDDARKLFD+MP RD
Sbjct: 8 TSNSFTERYFHFRYPVFIRYICNIVNYSSNLVSNQLLSELSKDGRVDDARKLFDKMPHRD 67
Query: 181 KYSWNIMISAYANLGNLVEARKLFNETPTKNSITWSSLVSGYCKNGCEVEGLRLFSQMWS 240
KYSWNIMISAYAN GNLVEARKLF+ETPTKNSITWSSLVSGYC++GCEVEGLRLFSQMWS
Sbjct: 68 KYSWNIMISAYANKGNLVEARKLFHETPTKNSITWSSLVSGYCRHGCEVEGLRLFSQMWS 127
Query: 241 EGQKPSQYTLGSVLRACSTLGLLHSGKIIHCY---------------------------- 300
+GQKPSQYTLGSVLRACST+GLLH GK+IHCY
Sbjct: 128 KGQKPSQYTLGSVLRACSTMGLLHGGKMIHCYVIKNQLEANIFVATGLVDMYSKCKCLLE 187
Query: 301 ------------------------------------------------------------ 360
Sbjct: 188 AEYLFLSLPDRRNYVLWTAMLTGYAQNGDSLKAIQCFKEMRILGIDSNQFTFPSILTACA 247
Query: 361 ----------VHGCIIWSGFGANVYVQSALVDMYAKCGDLASARMILNIMEIDDVVCWNS 420
VHGCI+WSGFGANV+VQSALVDMYAKCGDL SARM+L+IMEIDDVVCWNS
Sbjct: 248 AISAYTFGLQVHGCIVWSGFGANVFVQSALVDMYAKCGDLNSARMVLDIMEIDDVVCWNS 307
Query: 421 MIVGCVVHGHMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKDLKNGESVHSLIIKTG 480
MIVGCV G+ EEALVLFHKMH+RD+RIDDFT+PS+L SLASC DLK GESVHSLIIKTG
Sbjct: 308 MIVGCVAQGYTEEALVLFHKMHDRDMRIDDFTFPSILNSLASCGDLKKGESVHSLIIKTG 367
Query: 481 FDACKTVSNALVDMYAKQGNLSCALEVFNKISDKDVISWTSLVTGYVHNGFHEKALKLFC 540
FDAC+TVSNALVDMY+KQGNL CA EVFNKI DKDVISWTSLVTGYVHNGFHEKALKLFC
Sbjct: 368 FDACRTVSNALVDMYSKQGNLGCAFEVFNKIPDKDVISWTSLVTGYVHNGFHEKALKLFC 427
Query: 541 DMRIARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSVGSLLSAENSLITMYAKCG 600
DMRIA V LDQFVVACVFSACAELTVIEFGRQVHA+FIK+SVGSLLSAENSL+TMYAKCG
Sbjct: 428 DMRIAGVALDQFVVACVFSACAELTVIEFGRQVHADFIKTSVGSLLSAENSLVTMYAKCG 487
Query: 601 CLEDAIRVFDSMENRNVISWTAIIVGYAQNGRGKDSLHFYDQMIVDGITPDPVTFIGLLF 660
CLEDA RVFDSM NRNVISWTAIIVGYAQNGRGKDSLHFYDQMI++GI PDPVTFIGLLF
Sbjct: 488 CLEDATRVFDSMLNRNVISWTAIIVGYAQNGRGKDSLHFYDQMIINGIKPDPVTFIGLLF 547
Query: 661 ACSHAGLVETGRSYFESMEKVYGIKPASDHYACMIDLLGRAGKLNEAEDLLNRMEVEPDA 720
ACSHAGLVETGRSYF+SMEKVYGIKPA DHYACMIDLLGRAGKL+EAEDLLN+MEVEPDA
Sbjct: 548 ACSHAGLVETGRSYFDSMEKVYGIKPAPDHYACMIDLLGRAGKLSEAEDLLNQMEVEPDA 607
Query: 721 TIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRSM 780
T+WKSLLSACRVHGNLELGERAG+NLIKLEP NSLPYVLLSNMFSVAGRWED A IR+ M
Sbjct: 608 TLWKSLLSACRVHGNLELGERAGRNLIKLEPLNSLPYVLLSNMFSVAGRWEDVAQIRKLM 667
Query: 781 KTLGINKEPGYSWIETKSQVHTFISEDRSHPLSAEIYSKIDGIMILIKEAGHVPDMNFAL 826
KT+GINKEPG SWIE KSQVHTFISEDRSHP++ EIYSKID +MILIKEAG+VPDMNFAL
Sbjct: 668 KTMGINKEPGCSWIEMKSQVHTFISEDRSHPMTVEIYSKIDEMMILIKEAGYVPDMNFAL 727
BLAST of Lsi01G019470 vs. TAIR 10
Match:
AT3G61170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 713.8 bits (1841), Expect = 1.6e-205
Identity = 370/742 (49.87%), Postives = 476/742 (64.15%), Query Frame = 0
Query: 153 SNQLLSELSKDGRVDDARKLFDQMPDRDKYSWNIMISAYANLGNLVEARKLFNETPTKNS 212
SN LL +LSK GRVD+AR++FD+MP+RD+++WN MI AY+N L +A KLF P KN+
Sbjct: 31 SNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNT 90
Query: 213 ITWSSLVSGYCKNGCEVEGLRLFSQMWSEGQKPSQYTLGSVLRACSTLGLLHSGKIIH-- 272
I+W++L+SGYCK+G +VE LF +M S+G KP++YTLGSVLR C++L LL G+ IH
Sbjct: 91 ISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGH 150
Query: 273 ------------------------------------------------------------ 332
Sbjct: 151 TIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFK 210
Query: 333 ---CY---------------------------------VHGCIIWSGFGANVYVQSALVD 392
C+ VH CI+ SGF N+YVQSAL+D
Sbjct: 211 AIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALID 270
Query: 393 MYAKCGDLASARMILNIMEIDDVVCWNSMIVGCVVHGHMEEALVLFHKMHNRDIRIDDFT 452
MYAKC ++ SAR +L ME+DDVV WNSMIVGCV G + EAL +F +MH RD++IDDFT
Sbjct: 271 MYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFT 330
Query: 453 YPSVLKSLA-SCKDLKNGESVHSLIIKTGFDACKTVSNALVDMYAKQGNLSCALEVFNKI 512
PS+L A S ++K S H LI+KTG+ K V+NALVDMYAK+G + AL+VF +
Sbjct: 331 IPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGM 390
Query: 513 SDKDVISWTSLVTGYVHNGFHEKALKLFCDMRIARVDLDQFVVACVFSACAELTVIEFGR 572
+KDVISWT+LVTG HNG +++ALKLFC+MR+ + D+ V A V SA AELT++EFG+
Sbjct: 391 IEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQ 450
Query: 573 QVHANFIKSSVGSLLSAENSLITMYAKCGCLEDAIRVFDSMENRNVISWTAIIVGYAQNG 632
QVH N+IKS S LS NSL+TMY KCG LEDA +F+SME R++I+WT +IVGYA+N
Sbjct: 451 QVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKN- 510
Query: 633 RGKDSLHFYDQMIVDGITPDPVTFIGLLFACSHAGLVETGRSYFESMEKVYGIKPASDHY 692
GL+E + YF+SM VYGI P +HY
Sbjct: 511 ----------------------------------GLLEDAQRYFDSMRTVYGITPGPEHY 570
Query: 693 ACMIDLLGRAGKLNEAEDLLNRMEVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEP 752
ACMIDL GR+G + E LL++MEVEPDAT+WK++L+A R HGN+E GERA K L++LEP
Sbjct: 571 ACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEP 630
Query: 753 SNSLPYVLLSNMFSVAGRWEDAAHIRRSMKTLGINKEPGYSWIETKSQVHTFISEDRSHP 796
+N++PYV LSNM+S AGR ++AA++RR MK+ I+KEPG SW+E K +VH+F+SEDR HP
Sbjct: 631 NNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHP 690
BLAST of Lsi01G019470 vs. TAIR 10
Match:
AT2G22070.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 558.1 bits (1437), Expect = 1.1e-158
Identity = 284/738 (38.48%), Postives = 430/738 (58.27%), Query Frame = 0
Query: 154 NQLLSELSKDGRVDDARKLFDQMPDRDKYSWNIMISAYANLGNLVEARKLFNETPTKNSI 213
N L++ SK G ARKLFD+MP R +SWN ++SAY+ G++ + F++ P ++S+
Sbjct: 53 NNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSV 112
Query: 214 TWSSLVSGYCKNGCEVEGLRLFSQMWSEGQKPSQYTLGSVLRACSTLGLLHSGKIIHCYV 273
+W++++ GY G + +R+ M EG +P+Q+TL +VL + + + +GK +H +
Sbjct: 113 SWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSF- 172
Query: 274 HGCIIWSGFGANVYVQSALVDMYAKCGDLASARMILNIMEIDDVVCWNSMIVGCVVHGHM 333
I+ G NV V ++L++MYAKCGD A+ + + M + D+ WN+MI + G M
Sbjct: 173 ---IVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQM 232
Query: 334 EEALVLFHKMHNRDI--------------------------------RIDDFTYPSVLKS 393
+ A+ F +M RDI D FT SVL +
Sbjct: 233 DLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSA 292
Query: 394 LASCKDLKNGESVHSLIIKTGFDACKTVSNALVDMYA----------------------- 453
A+ + L G+ +HS I+ TGFD V NAL+ MY+
Sbjct: 293 CANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIE 352
Query: 454 ----------KQGNLSCALEVFNKISDKDVISWTSLVTGYVHNGFHEKALKLFCDMRIAR 513
K G+++ A +F + D+DV++WT+++ GY +G + +A+ LF M
Sbjct: 353 GFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGG 412
Query: 514 VDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSVGSLLSAENSLITMYAKCGCLEDAI 573
+ + +A + S + L + G+Q+H + +KS +S N+LITMYAK G + A
Sbjct: 413 QRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSAS 472
Query: 574 RVFDSME-NRNVISWTAIIVGYAQNGRGKDSLHFYDQMIVDGITPDPVTFIGLLFACSHA 633
R FD + R+ +SWT++I+ AQ+G +++L ++ M+++G+ PD +T++G+ AC+HA
Sbjct: 473 RAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHA 532
Query: 634 GLVETGRSYFESMEKVYGIKPASDHYACMIDLLGRAGKLNEAEDLLNRMEVEPDATIWKS 693
GLV GR YF+ M+ V I P HYACM+DL GRAG L EA++ + +M +EPD W S
Sbjct: 533 GLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGS 592
Query: 694 LLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRSMKTLGI 753
LLSACRVH N++LG+ A + L+ LEP NS Y L+N++S G+WE+AA IR+SMK +
Sbjct: 593 LLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRV 652
Query: 754 NKEPGYSWIETKSQVHTFISEDRSHPLSAEIYSKIDGIMILIKEAGHVPDMNFALRDMDE 813
KE G+SWIE K +VH F ED +HP EIY + I IK+ G+VPD L D++E
Sbjct: 653 KKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEE 712
Query: 814 EAKERSLAYHSEKLAVAFGLLTVPKGAPIRIFKNLRVCGDCHSAMKYISSVFKRHIILRD 826
E KE+ L +HSEKLA+AFGL++ P +RI KNLRVC DCH+A+K+IS + R II+RD
Sbjct: 713 EVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRD 772
BLAST of Lsi01G019470 vs. TAIR 10
Match:
AT4G33170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 548.5 bits (1412), Expect = 9.1e-156
Identity = 273/641 (42.59%), Postives = 406/641 (63.34%), Query Frame = 0
Query: 185 NIMISAYANLGNLVEARKLFNETPTKNSITWSSLVSGYCKNGCEVEGLRLFSQMWSEGQK 244
N +I+ Y L AR +F+ ++ I+W+S+++G +NG EVE + LF Q+ G K
Sbjct: 354 NSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLK 413
Query: 245 PSQYTLGSVLRACSTLGLLHSGKIIHCYVHGCIIWSGFGANVYVQSALVDMYAKCGDLAS 304
P QYT+ SVL+A S+ L G + VH I ++ +V +AL+D Y++ +
Sbjct: 414 PDQYTMTSVLKAASS---LPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKE 473
Query: 305 ARMILNIMEIDDVVCWNSMIVGCVVHGHMEEALVLFHKMHNRDIRIDDFTYPSVLKSLAS 364
A ++ D+V WN+M+ G + L LF MH + R DDFT +V K+
Sbjct: 474 AEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGF 533
Query: 365 CKDLKNGESVHSLIIKTGFDACKTVSNALVDMYAKQGNLSCALEVFNKISDKDVISWTSL 424
+ G+ VH+ IK+G+D VS+ ++DMY K G++S A F+ I D ++WT++
Sbjct: 534 LFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTM 593
Query: 425 VTGYVHNGFHEKALKLFCDMRIARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSV 484
++G + NG E+A +F MR+ V D+F +A + A + LT +E GRQ+HAN +K +
Sbjct: 594 ISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNC 653
Query: 485 GSLLSAENSLITMYAKCGCLEDAIRVFDSMENRNVISWTAIIVGYAQNGRGKDSLHFYDQ 544
+ SL+ MYAKCG ++DA +F +E N+ +W A++VG AQ+G GK++L + Q
Sbjct: 654 TNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQ 713
Query: 545 MIVDGITPDPVTFIGLLFACSHAGLVETGRSYFESMEKVYGIKPASDHYACMIDLLGRAG 604
M GI PD VTFIG+L ACSH+GLV + SM YGIKP +HY+C+ D LGRAG
Sbjct: 714 MKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAG 773
Query: 605 KLNEAEDLLNRMEVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSN 664
+ +AE+L+ M +E A+++++LL+ACRV G+ E G+R L++LEP +S YVLLSN
Sbjct: 774 LVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSN 833
Query: 665 MFSVAGRWEDAAHIRRSMKTLGINKEPGYSWIETKSQVHTFISEDRSHPLSAEIYSKIDG 724
M++ A +W++ R MK + K+PG+SWIE K+++H F+ +DRS+ + IY K+
Sbjct: 834 MYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKD 893
Query: 725 IMILIKEAGHVPDMNFALRDMDEEAKERSLAYHSEKLAVAFGLLTVPKGAPIRIFKNLRV 784
++ IK+ G+VP+ +F L D++EE KER+L YHSEKLAVAFGLL+ P PIR+ KNLRV
Sbjct: 894 MIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRV 953
Query: 785 CGDCHSAMKYISSVFKRHIILRDLNCFHHFIEGKCSCGDFW 826
CGDCH+AMKYI+ V+ R I+LRD N FH F +G CSCGD+W
Sbjct: 954 CGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
BLAST of Lsi01G019470 vs. TAIR 10
Match:
AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 526.6 bits (1355), Expect = 3.7e-149
Identity = 257/654 (39.30%), Postives = 400/654 (61.16%), Query Frame = 0
Query: 185 NIMISAYANLGNLVEARKLFNETPTKNSITWSSLVSGYCKNGCEVEGLRLFSQMWSEGQK 244
N +++ Y LG L ++ L ++ +TW++++S C+N +E L +M EG +
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 245 PSQYTLGSVLRACSTLGLLHSGKIIHCYVHGCIIWSGFGANVYVQSALVDMYAKCGDLAS 304
P ++T+ SVL ACS L +L +GK +H Y + N +V SALVDMY C + S
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAY---ALKNGSLDENSFVGSALVDMYCNCKQVLS 359
Query: 305 ARMILNIMEIDDVVCWNSMIVGCVVHGHMEEALVLFHKM-HNRDIRIDDFTYPSVLKSLA 364
R + + M + WN+MI G + H +EAL+LF M + + + T V+ +
Sbjct: 360 GRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACV 419
Query: 365 SCKDLKNGESVHSLIIKTGFDACKTVSNALVDMYAKQGNLSCALEVFNKISDKDVISWTS 424
E++H ++K G D + V N L+DMY++ G + A+ +F K+ D+D+++W +
Sbjct: 420 RSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNT 479
Query: 425 LVTGYVHNGFHEKALKLFCDMR---------IARVDL--DQFVVACVFSACAELTVIEFG 484
++TGYV + HE AL L M+ +RV L + + + +CA L+ + G
Sbjct: 480 MITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG 539
Query: 485 RQVHANFIKSSVGSLLSAENSLITMYAKCGCLEDAIRVFDSMENRNVISWTAIIVGYAQN 544
+++HA IK+++ + ++ ++L+ MYAKCGCL+ + +VFD + +NVI+W II+ Y +
Sbjct: 540 KEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMH 599
Query: 545 GRGKDSLHFYDQMIVDGITPDPVTFIGLLFACSHAGLVETGRSYFESMEKVYGIKPASDH 604
G G++++ M+V G+ P+ VTFI + ACSH+G+V+ G F M+ YG++P+SDH
Sbjct: 600 GNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDH 659
Query: 605 YACMIDLLGRAGKLNEAEDLLNRMEVE-PDATIWKSLLSACRVHGNLELGERAGKNLIKL 664
YAC++DLLGRAG++ EA L+N M + A W SLL A R+H NLE+GE A +NLI+L
Sbjct: 660 YACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQL 719
Query: 665 EPSNSLPYVLLSNMFSVAGRWEDAAHIRRSMKTLGINKEPGYSWIETKSQVHTFISEDRS 724
EP+ + YVLL+N++S AG W+ A +RR+MK G+ KEPG SWIE +VH F++ D S
Sbjct: 720 EPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSS 779
Query: 725 HPLSAEIYSKIDGIMILIKEAGHVPDMNFALRDMDEEAKERSLAYHSEKLAVAFGLLTVP 784
HP S ++ ++ + +++ G+VPD + L +++E+ KE L HSEKLA+AFG+L
Sbjct: 780 HPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTS 839
Query: 785 KGAPIRIFKNLRVCGDCHSAMKYISSVFKRHIILRDLNCFHHFIEGKCSCGDFW 826
G IR+ KNLRVC DCH A K+IS + R IILRD+ FH F G CSCGD+W
Sbjct: 840 PGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
BLAST of Lsi01G019470 vs. TAIR 10
Match:
AT1G68930.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 526.2 bits (1354), Expect = 4.8e-149
Identity = 263/688 (38.23%), Postives = 414/688 (60.17%), Query Frame = 0
Query: 169 ARKLFDQMPDRDKYSWNIMISAYANLGNLVEARKLFNETPTKNSITWSSLVSGYCKNGCE 228
AR++FD++P + +SWN ++ AY+ G + E F + P ++ +TW+ L+ GY +G
Sbjct: 60 ARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLV 119
Query: 229 VEGLRLFSQMWSE-GQKPSQYTLGSVLRACSTLGLLHSGKIIHCYVHGCIIWSGFGANVY 288
++ ++ M + ++ TL ++L+ S+ G + GK +HG +I GF + +
Sbjct: 120 GAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGK----QIHGQVIKLGFESYLL 179
Query: 289 VQSALVDMYAKCGDLASAR-------------------------MILNIMEI-----DDV 348
V S L+ MYA G ++ A+ MI + +++ D
Sbjct: 180 VGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDS 239
Query: 349 VCWNSMIVGCVVHGHMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKDLKNGESVHSL 408
V W +MI G +G +EA+ F +M + +++D + + SVL + + G+ +H+
Sbjct: 240 VSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHAC 299
Query: 409 IIKTGFDACKTVSNALVDMYAKQGNLSCALEVFNKISDKDVISWTSLVTGYVHNGFHEKA 468
II+T F V +AL+DMY K L A VF+++ K+V+SWT++V GY G E+A
Sbjct: 300 IIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEA 359
Query: 469 LKLFCDMRIARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSVGSLLSAENSLITM 528
+K+F DM+ + +D D + + SACA ++ +E G Q H I S + ++ NSL+T+
Sbjct: 360 VKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTL 419
Query: 529 YAKCGCLEDAIRVFDSMENRNVISWTAIIVGYAQNGRGKDSLHFYDQMIVDGITPDPVTF 588
Y KCG ++D+ R+F+ M R+ +SWTA++ YAQ GR +++ +D+M+ G+ PD VT
Sbjct: 420 YGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTL 479
Query: 589 IGLLFACSHAGLVETGRSYFESMEKVYGIKPASDHYACMIDLLGRAGKLNEAEDLLNRME 648
G++ ACS AGLVE G+ YF+ M YGI P+ HY+CMIDL R+G+L EA +N M
Sbjct: 480 TGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMP 539
Query: 649 VEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAH 708
PDA W +LLSACR GNLE+G+ A ++LI+L+P + Y LLS++++ G+W+ A
Sbjct: 540 FPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQ 599
Query: 709 IRRSMKTLGINKEPGYSWIETKSQVHTFISEDRSHPLSAEIYSKIDGIMILIKEAGHVPD 768
+RR M+ + KEPG SWI+ K ++H+F ++D S P +IY+K++ + I + G+ PD
Sbjct: 600 LRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPD 659
Query: 769 MNFALRDMDEEAKERSLAYHSEKLAVAFGLLTVPKGAPIRIFKNLRVCGDCHSAMKYISS 826
+F D++E K + L YHSE+LA+AFGL+ VP G PIR+ KNLRVC DCH+A K+ISS
Sbjct: 660 TSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISS 719
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9SHZ8 | 1.6e-157 | 38.48 | Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX... | [more] |
Q9SMZ2 | 1.3e-154 | 42.59 | Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX... | [more] |
Q7Y211 | 5.2e-148 | 39.30 | Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop... | [more] |
Q9CAA8 | 6.8e-148 | 38.23 | Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis th... | [more] |
Q9FIB2 | 6.4e-146 | 40.90 | Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis th... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3B568 | 0.0e+00 | 80.95 | putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial is... | [more] |
A0A6J1HV89 | 0.0e+00 | 79.20 | LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g03880, mito... | [more] |
A0A6J1D1V5 | 0.0e+00 | 78.33 | pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Momordic... | [more] |
A0A6J1EPT9 | 0.0e+00 | 79.49 | pentatricopeptide repeat-containing protein At2g03880, mitochondrial isoform X1 ... | [more] |
A0A6J1EL19 | 0.0e+00 | 79.79 | pentatricopeptide repeat-containing protein At2g03880, mitochondrial isoform X2 ... | [more] |
Match Name | E-value | Identity | Description | |
XP_038883141.1 | 0.0e+00 | 83.81 | putative pentatricopeptide repeat-containing protein At3g15130 [Benincasa hispid... | [more] |
XP_011653924.1 | 0.0e+00 | 81.69 | pentatricopeptide repeat-containing protein At2g03880, mitochondrial isoform X1 ... | [more] |
XP_008442211.1 | 0.0e+00 | 80.95 | PREDICTED: putative pentatricopeptide repeat-containing protein At3g13770, mitoc... | [more] |
XP_022967715.1 | 0.0e+00 | 79.20 | LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g03880, mito... | [more] |
XP_022147252.1 | 0.0e+00 | 78.33 | pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Momordica ... | [more] |
Match Name | E-value | Identity | Description | |
AT3G61170.1 | 1.6e-205 | 49.87 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G22070.1 | 1.1e-158 | 38.48 | pentatricopeptide (PPR) repeat-containing protein | [more] |
AT4G33170.1 | 9.1e-156 | 42.59 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G57430.1 | 3.7e-149 | 39.30 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G68930.1 | 4.8e-149 | 38.23 | pentatricopeptide (PPR) repeat-containing protein | [more] |