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Lsi01G019450 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGGTACGCTTTTTTAAATTTTGATGGGGAGTTCTGAAAGCTTGAGAATCAGACCTTTCCATCGAAATTTTAGGATTATTTGCTACCAAATTAAATGCTGAAGAAGCAAGTAGTCTCTGAACTGAATACGCATCACAATGATGGATTTAATTTGAGAAGAAATGGAAGCCTCTTGAAGAAAAAGAATTAATTAAGTTAAATGAAGAAAATATCATATTCATCATCATTAGGTTGGCTCTTATCCCAATGGAAAAAGTATTATCGTCTTTAGCCTACGATGCGATTAAGTTCGAGTTTCATGCTGAATTCAAAAGAATTGAATCTTGATAATCTAATCTTCAGATTTCAAATGATCCTGCTGCAGTATGCTTTTAGGTTCCTAGACAGAAATTTGTTTACTTAGTACTTGTGTGCATATCTTTGTTACACCTCTGTGATGCATATTATGCTCTTCATTGGCATTTGATTAAAAAAAGCAGAGTAAAGAATAAATAAACGGAAATGAGGGGCAGAAGGATAGTAACAAAAGGTCAAGTAAGATATTTAAACGGTTTGTGTAGAATATTCTTTATTTAATTTTACGAAGTTTGTGACTGAATCAGGTGGCGCTATATTCACGTGGGGCTGGGGAGGTTCTCACGGAACGTTTTTTGTGGATGGTCATTCTTCTGGGGGTCAGCTGGTGTGCTTCTCATTTTCTTGTCTTTTCTTTTTCACTGGCTTATTATATCTCTGCTGCTCAATGAATCTGGATTTACTGCTGCATTTGTTTGCACTTGGTCAACATTTGGATGTGAATGCTTGAATAGATTTTTAATTTTATCAAATTGAGCCTTGAAATTAAGTTAAGTCTTTCAATCCTTACCTTAAACTTGAATGGCTGTTACAATCTTTATTTAAAAAGGAAAACTAAAGATATAGTATGAAGGATTATTAAAAAGAAGTTATGATGTTCGTTCAATACGTTATTAAAATATGTTTAGTACGAAATTGATGAAACTTTTAGGGAAATATAATGCTAGAACTGTTTTTTATTTTATTTTGGCTATTGTTTCGATTGTTTATATGTATTGATTGGGCTTAATGTTATGCAATACTTGATTTTCATTGAAATTAGCGAGTTGGAAAAAGTTTTTACCTGCCTTTGTTAAAATTTGTGGATAAATGTAGTGGAAATGAAACAGAAGGTAAAAATACCAACACTTGGGTTAATTTCAATGAAATTGAAAGTTCAGTTGTAAAGTGCTACACCTCATCAGGTTTGAGGTAAAAATATAGTTCCTCTGTTAAAAAATAATTCACTACACAACATAAAATGTTTCGTATCAGTTATATATATAGACTGACTGTATTCTGAATTTCCTTCCAAATATTTGGGTTTGCACTAGATTTAGGACTATTCAGTGAATGTGGTATTTACCCATAAAGGATCTGCTTTAACTCTAGGGGCATGGAAGTGATGTTGACTATGTGAAACCGACAATGATCGACCTCGGAGAAAATGTGAAGGCAGTACAAGTCTCCTGTGGTTTCAACCATACCGGTGCAATACTCGAGTACAAGTGAGTTTTGAACTTTTGACCACGGGATACATCCAGGTATAATAGTAATTGAGCAACGCATGTTCATAAATTCAGTACAAAGTCATTACAACATGTATCATTCATATAAATGCATCATTACCAGTAAGGAAAATAAAATTGTAAACTGTATATGATATGATTCTGGTGTCACAGAAATAATCATGAACATGGGAGATGATTCCCAATTCTGAGAATATTTATTCAACATTAAATTTAGAATGGTTCTTTGCAGCTCAAGTTTATGGTGTTTTATACTCTCTCATTTGATTTCTGCATTGCCTTGTGTGAACACCTTAATGATATTGGTAATGTTTTTTTTTATTCCCTTTCTTAAGGTCTCTGAAATGGTAA ATGAAGTTTGTGACTGAATCAGGTGGCGCTATATTCACGTGGGGCTGGGGAGGTTCTCACGGAACGTTTTTTGTGGATGGTCATTCTTCTGGGGGTCAGCTGGGGCATGGAAGTGATGTTGACTATGTGAAACCGACAATGATCGACCTCGGAGAAAATGTGAAGGCAGTACAAGTCTCCTGTGGTTTCAACCATACCGGTGCAATACTCGAGTACAAGTCTCTGAAATGGTAA ATGAAGTTTGTGACTGAATCAGGTGGCGCTATATTCACGTGGGGCTGGGGAGGTTCTCACGGAACGTTTTTTGTGGATGGTCATTCTTCTGGGGGTCAGCTGGGGCATGGAAGTGATGTTGACTATGTGAAACCGACAATGATCGACCTCGGAGAAAATGTGAAGGCAGTACAAGTCTCCTGTGGTTTCAACCATACCGGTGCAATACTCGAGTACAAGTCTCTGAAATGGTAA MKFVTESGGAIFTWGWGGSHGTFFVDGHSSGGQLGHGSDVDYVKPTMIDLGENVKAVQVSCGFNHTGAILEYKSLKW Homology
BLAST of Lsi01G019450 vs. ExPASy Swiss-Prot
Match: Q9FN03 (Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana OX=3702 GN=UVR8 PE=1 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 3.3e-04 Identity = 22/65 (33.85%), Postives = 34/65 (52.31%), Query Frame = 0
BLAST of Lsi01G019450 vs. ExPASy TrEMBL
Match: A0A6J1HRS2 (PH, RCC1 and FYVE domains-containing protein 1 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111466019 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 3.6e-30 Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = 0
BLAST of Lsi01G019450 vs. ExPASy TrEMBL
Match: A0A6J1HMP4 (ultraviolet-B receptor UVR8 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111466019 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 3.6e-30 Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = 0
BLAST of Lsi01G019450 vs. ExPASy TrEMBL
Match: A0A6J1HP08 (ultraviolet-B receptor UVR8 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111466019 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 3.6e-30 Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = 0
BLAST of Lsi01G019450 vs. ExPASy TrEMBL
Match: A0A6J1EEN4 (ultraviolet-B receptor UVR8 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111432545 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 3.6e-30 Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = 0
BLAST of Lsi01G019450 vs. ExPASy TrEMBL
Match: A0A5A7TCI0 (Ultraviolet-B receptor UVR8 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G001080 PE=4 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 1.4e-29 Identity = 64/67 (95.52%), Postives = 65/67 (97.01%), Query Frame = 0
BLAST of Lsi01G019450 vs. NCBI nr
Match: XP_038883567.1 (ultraviolet-B receptor UVR8 isoform X1 [Benincasa hispida]) HSP 1 Score: 142.1 bits (357), Expect = 2.0e-30 Identity = 66/67 (98.51%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of Lsi01G019450 vs. NCBI nr
Match: XP_038883571.1 (ultraviolet-B receptor UVR8 isoform X5 [Benincasa hispida]) HSP 1 Score: 142.1 bits (357), Expect = 2.0e-30 Identity = 66/67 (98.51%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of Lsi01G019450 vs. NCBI nr
Match: XP_022966331.1 (ultraviolet-B receptor UVR8 isoform X1 [Cucurbita maxima]) HSP 1 Score: 140.2 bits (352), Expect = 7.5e-30 Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = 0
BLAST of Lsi01G019450 vs. NCBI nr
Match: XP_022966332.1 (ultraviolet-B receptor UVR8 isoform X2 [Cucurbita maxima]) HSP 1 Score: 140.2 bits (352), Expect = 7.5e-30 Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = 0
BLAST of Lsi01G019450 vs. NCBI nr
Match: XP_022925248.1 (ultraviolet-B receptor UVR8 isoform X3 [Cucurbita moschata]) HSP 1 Score: 140.2 bits (352), Expect = 7.5e-30 Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = 0
BLAST of Lsi01G019450 vs. TAIR 10
Match: AT5G08710.1 (Regulator of chromosome condensation (RCC1) family protein ) HSP 1 Score: 117.9 bits (294), Expect = 3.7e-27 Identity = 50/66 (75.76%), Postives = 58/66 (87.88%), Query Frame = 0
BLAST of Lsi01G019450 vs. TAIR 10
Match: AT5G63860.1 (Regulator of chromosome condensation (RCC1) family protein ) HSP 1 Score: 45.4 bits (106), Expect = 2.3e-05 Identity = 22/65 (33.85%), Postives = 34/65 (52.31%), Query Frame = 0
BLAST of Lsi01G019450 vs. TAIR 10
Match: AT1G65920.1 (Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain ) HSP 1 Score: 42.4 bits (98), Expect = 2.0e-04 Identity = 22/53 (41.51%), Postives = 28/53 (52.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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