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Lsi01G019250 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCTAATTGACCAATAGTACTCATTAACCAAGAAACCCTAGAGTTTTTAAAATATCTGTATTTTCCTCCGCTTTGAGGTCTAGCCGGCAGCCAGAGTTCTTCGCGACCTTCTGCTTCGTCTTCCAGCCAAATTCTCAGCCCTAAACCCCACCCAACATGGTATGTTTTTTCTTCAAAACCCTTTAAAATTCTCTTCTTCTTCCTTATATTACTCTGTTTTCACTGTGGAATCGAGTAAGGCTAGTGTAGAATCCCCTTCTGAAGTACTGCAAATTTTCTCTCTTGTCATTCTGTAGTTTAAGCTATGCTAGATTTTTGGGGAATTAGGTGGGTTTTCTGAAAATTAGCGAGATAAGCCGTTATTGTCTGAGTTCGTCGTTCTATACCACTATTCTTTACTGGAAATCAAAGCAGAATCGACTAATTTTTTAGCCTTAAAGCTGCGGAATTAATTGAATTGGACTGCTGAACCAGAGTGATTTTATTTCATTTTCTTTCTTGGATCTGAAATATAGCTAAGATGATTGTGCTATCATTGTATAATTTATTATAACGGTTTCTCCGTTTCAATTGAGAGTGGAAAAGATGGGAAGGTCTATGTGTTATTGGATTTATGAATTCAGCAATGTAAACTTTCTCCTACTTGGTATCCGTATGGCAGGCACCTAAGAAGGATAAGGCTCCTCCTCCGTCCTCCAAGCCCGCTAAATCTGGTGGAGGAAAGCAGAAGAAGAAGGTAATTCGTTATGCAATGGCTGTTTTGTTTTTAAAGTTTAGGCTCTGGTTGATAAAGATTTGGTTTATGAAAGTTAATTTTTATAAACTGTACTTCTGCTTATAAATTTATTTGTTGTGTTACCTTTTTATTCTAACATGTTTTCAAAACCCAAGCCAAAATGTGAAAACTAAACTATATAAGGCTCGTTTGATAATTATTGGGGTTTTGGCTTTTGAAAATTAAGCTTATAAATATTACCTTCTACCTACCTATGAGTTTCTTTGGTATGATAAACTTTTGAAATATGTTTTTTGAAATCCAAGCCAAGTTTTGAAAACTAAAAAATGGTTCTTACAATTTTTTTTTTTTGGAATTTGGCTATGAATTCGAATGTTTATTTGTAAAAGATGAAAACCATTATAAAGAAAATATGAGAAAATAAGCTGAATTTTCAAAATCCAAAAACAAAAAATCAAATGGTTATCAAAAGAGGTAGTTTTCTTAAAACTTGCTTTTGGAATTTGGAATTTAGAATTAGGTTGTTTCTTCATCGGTTCGATGCCATGTCGTCGATAGCTCAATGGCGGTGACCGATGATGCTATGATTGAACCAAAACAAGTTTTTTCACATCTTGATAGGAATCTGTTCATCTTTTTTCTAAAGATTTACAGAGCCGTTTTGTGTGATTACATTTTTGTTCTTTTTTCAAACTAGGGTATTTTTTCAAGAAGTGTGAAATCGTAGTAAAGAATTGGTAAGGAAACTAACACAATTTTAAAAAACGGAAAACTAAAAACAAAATGGTTATCAAAAGAAGTCTTAGTGATTAGAAGTCTAGTGTGTATTTAGGTACATCTTTGACGCCTGTTACTGGTTAGTTCTTGAATGCTTTTGTAAATCTTACATTCTTACCATTAATTGTGTAAATTTAATTCTTATTTTGTTTATTGCTCAGAAATGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACATGGTACTGTTTGATCAGGGATCCTATGACAAGCTTCTTTCAGAAGCTCCAAAATTCAAGCTTATTACTCCTTCCATCCTTTCAGACAGATTAAGGGTATGTCTTTCTCAATCCCATTTGGCTTGCATCTTCACATGGTATAAATGCATGTCTTTTGATTGTGAAATATGGACCATGTTTCTTAATATTTGTTTGAGATTTGAGTGCCCCACACTACTTCACCCTTCAATCAATCTTTTTTTTGAAAGAAAGGTAAGACCAAACCCTTCTATCCATTAAAAATGGAATGGAAAAGTAATTGGGGGTTGGTAACTTGGTGATTATAGGTTGAGCTTTCTTTCTCTGTTATGAACTCCATTGTATGATAATCATAATCACATGATTTGAAATCTATGTCAAAGACTCCATGTGCTATATGGTATATATATCAAGCTATATTTGTTGGGTCTCCATTTAATTAAACATGTCATTGTATTTTATATTCTACGCTTCCCAAACACGTGATCAGATTCGTTCCGGGACGACTTGAATTACAGTTACATAGTTTATGTATTGCAAATTACATTTTGATAATTTCTCTCCTGTTTTTACCTACCATATTCCAAATGTGTCATTCACTTGAGATGCTGCAGCACTCCCATCTTTAAACTACATATATATCCATATGGTTAAACTACAATTACAAAGTAATCTCTTTCAGTTTGATGTCATGTCAGCAAGGTGTTATATTTTGTACATTAATCCATGTGAGAATAAACAATTATTCTTAAACTCACATTTAACCATAAGAGTAGGGCACCTTTTGTAACTATCCCTTAATGTGAAGTATCTGATATCTCTATCCAAAATAAAGTGCCTAATATCCTCCATATGCCATTTTTTCTAGAAGTAAAATTTTCTTAGGTTAGCATGTTATTCCTGTAATCCAACCAAACTGTGAATGGTTCTATTTGGATGGATTGTTATGAAGATGGTAAATTACTAAAACTCTCTGTTTGTTTGTCGTTACTGTTCATCAGATCAATGGATCGTTGGCACGTCGGGCGATTAGGGATTTAATGGCGAGAGGTTCTATTAGGCTCATATCTGCTCATTCTAGCCAGCAGATATACACTAGAGCAACTAATACATGATCAAAGAGTTGCTATTTGAAAGAGGAACATCTTGTTATTTTTATGATCATCCTGTCAGGAACTAATCTCTATGATTTTGAATATTGGCATGTTGCATTGAGAATTCGATGAATTATTTGTACGACTCAAACGTTTATTTTATTTTATCTTTTTTGTAATTTTGAATTCTTATATGTGGTTTAACAATTCCTCTATCTTGAATTTCTCTAAACTGAAACAAATGAGCATAGTATGCCTTTTATGATTTTCTTTC CCCTAATTGACCAATAGTACTCATTAACCAAGAAACCCTAGAGTTTTTAAAATATCTGTATTTTCCTCCGCTTTGAGGTCTAGCCGGCAGCCAGAGTTCTTCGCGACCTTCTGCTTCGTCTTCCAGCCAAATTCTCAGCCCTAAACCCCACCCAACATGGCACCTAAGAAGGATAAGGCTCCTCCTCCGTCCTCCAAGCCCGCTAAATCTGGTGGAGGAAAGCAGAAGAAGAAGAAATGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACATGGTACTGTTTGATCAGGGATCCTATGACAAGCTTCTTTCAGAAGCTCCAAAATTCAAGCTTATTACTCCTTCCATCCTTTCAGACAGATTAAGGATCAATGGATCGTTGGCACGTCGGGCGATTAGGGATTTAATGGCGAGAGGTTCTATTAGGCTCATATCTGCTCATTCTAGCCAGCAGATATACACTAGAGCAACTAATACATGATCAAAGAGTTGCTATTTGAAAGAGGAACATCTTGTTATTTTTATGATCATCCTGTCAGGAACTAATCTCTATGATTTTGAATATTGGCATGTTGCATTGAGAATTCGATGAATTATTTGTACGACTCAAACGTTTATTTTATTTTATCTTTTTTGTAATTTTGAATTCTTATATGTGGTTTAACAATTCCTCTATCTTGAATTTCTCTAAACTGAAACAAATGAGCATAGTATGCCTTTTATGATTTTCTTTC ATGGCACCTAAGAAGGATAAGGCTCCTCCTCCGTCCTCCAAGCCCGCTAAATCTGGTGGAGGAAAGCAGAAGAAGAAGAAATGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACATGGTACTGTTTGATCAGGGATCCTATGACAAGCTTCTTTCAGAAGCTCCAAAATTCAAGCTTATTACTCCTTCCATCCTTTCAGACAGATTAAGGATCAATGGATCGTTGGCACGTCGGGCGATTAGGGATTTAATGGCGAGAGGTTCTATTAGGCTCATATCTGCTCATTCTAGCCAGCAGATATACACTAGAGCAACTAATACATGA MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIRDLMARGSIRLISAHSSQQIYTRATNT Homology
BLAST of Lsi01G019250 vs. ExPASy Swiss-Prot
Match: Q9SIK2 (40S ribosomal protein S25-2 OS=Arabidopsis thaliana OX=3702 GN=RPS25B PE=3 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 2.0e-47 Identity = 99/108 (91.67%), Postives = 106/108 (98.15%), Query Frame = 0
BLAST of Lsi01G019250 vs. ExPASy Swiss-Prot
Match: Q8GYL5 (40S ribosomal protein S25-3 OS=Arabidopsis thaliana OX=3702 GN=RPS25D PE=3 SV=2) HSP 1 Score: 186.8 bits (473), Expect = 1.3e-46 Identity = 98/107 (91.59%), Postives = 105/107 (98.13%), Query Frame = 0
BLAST of Lsi01G019250 vs. ExPASy Swiss-Prot
Match: Q9T029 (40S ribosomal protein S25-4 OS=Arabidopsis thaliana OX=3702 GN=RPS25E PE=3 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 2.2e-46 Identity = 97/108 (89.81%), Postives = 105/108 (97.22%), Query Frame = 0
BLAST of Lsi01G019250 vs. ExPASy Swiss-Prot
Match: P46301 (40S ribosomal protein S25 OS=Solanum lycopersicum OX=4081 GN=RPS25 PE=3 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 1.1e-45 Identity = 96/108 (88.89%), Postives = 106/108 (98.15%), Query Frame = 0
BLAST of Lsi01G019250 vs. ExPASy Swiss-Prot
Match: Q9SIW5 (40S ribosomal protein S25-1 OS=Arabidopsis thaliana OX=3702 GN=RPS25A PE=3 SV=3) HSP 1 Score: 179.5 bits (454), Expect = 2.0e-44 Identity = 94/106 (88.68%), Postives = 101/106 (95.28%), Query Frame = 0
BLAST of Lsi01G019250 vs. ExPASy TrEMBL
Match: A0A1S3B608 (40S ribosomal protein S25 OS=Cucumis melo OX=3656 GN=LOC103486154 PE=3 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 2.1e-47 Identity = 106/108 (98.15%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of Lsi01G019250 vs. ExPASy TrEMBL
Match: A0A2N9J628 (40S ribosomal protein S25 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59693 PE=3 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 6.0e-47 Identity = 104/108 (96.30%), Postives = 107/108 (99.07%), Query Frame = 0
BLAST of Lsi01G019250 vs. ExPASy TrEMBL
Match: A0A6J1CLE7 (40S ribosomal protein S25 OS=Momordica charantia OX=3673 GN=LOC111012531 PE=3 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 1.0e-46 Identity = 104/108 (96.30%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of Lsi01G019250 vs. ExPASy TrEMBL
Match: I3TAL6 (40S ribosomal protein S25 OS=Lotus japonicus OX=34305 PE=2 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 1.7e-46 Identity = 102/108 (94.44%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of Lsi01G019250 vs. ExPASy TrEMBL
Match: A0A0A0KYW1 (40S ribosomal protein S25 OS=Cucumis sativus OX=3659 GN=Csa_4G571760 PE=3 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 1.7e-46 Identity = 103/108 (95.37%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of Lsi01G019250 vs. NCBI nr
Match: XP_008442240.1 (PREDICTED: 40S ribosomal protein S25-2 [Cucumis melo]) HSP 1 Score: 198.0 bits (502), Expect = 4.2e-47 Identity = 106/108 (98.15%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of Lsi01G019250 vs. NCBI nr
Match: XP_042496780.1 (40S ribosomal protein S25-2 [Macadamia integrifolia]) HSP 1 Score: 195.7 bits (496), Expect = 2.1e-46 Identity = 104/108 (96.30%), Postives = 107/108 (99.07%), Query Frame = 0
BLAST of Lsi01G019250 vs. NCBI nr
Match: XP_022142384.1 (40S ribosomal protein S25-2 [Momordica charantia]) HSP 1 Score: 195.7 bits (496), Expect = 2.1e-46 Identity = 104/108 (96.30%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of Lsi01G019250 vs. NCBI nr
Match: XP_004144662.1 (40S ribosomal protein S25-2 [Cucumis sativus] >KGN54880.1 hypothetical protein Csa_012054 [Cucumis sativus]) HSP 1 Score: 194.9 bits (494), Expect = 3.6e-46 Identity = 103/108 (95.37%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of Lsi01G019250 vs. NCBI nr
Match: AFK40360.1 (unknown [Lotus japonicus] >AFK49558.1 unknown [Lotus japonicus]) HSP 1 Score: 194.9 bits (494), Expect = 3.6e-46 Identity = 102/108 (94.44%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of Lsi01G019250 vs. TAIR 10
Match: AT2G21580.1 (Ribosomal protein S25 family protein ) HSP 1 Score: 189.5 bits (480), Expect = 1.4e-48 Identity = 99/108 (91.67%), Postives = 106/108 (98.15%), Query Frame = 0
BLAST of Lsi01G019250 vs. TAIR 10
Match: AT4G34555.1 (Ribosomal protein S25 family protein ) HSP 1 Score: 186.8 bits (473), Expect = 9.1e-48 Identity = 98/107 (91.59%), Postives = 105/107 (98.13%), Query Frame = 0
BLAST of Lsi01G019250 vs. TAIR 10
Match: AT4G39200.1 (Ribosomal protein S25 family protein ) HSP 1 Score: 186.0 bits (471), Expect = 1.6e-47 Identity = 97/108 (89.81%), Postives = 105/108 (97.22%), Query Frame = 0
BLAST of Lsi01G019250 vs. TAIR 10
Match: AT2G21580.2 (Ribosomal protein S25 family protein ) HSP 1 Score: 183.7 bits (465), Expect = 7.7e-47 Identity = 98/108 (90.74%), Postives = 105/108 (97.22%), Query Frame = 0
BLAST of Lsi01G019250 vs. TAIR 10
Match: AT4G39200.2 (Ribosomal protein S25 family protein ) HSP 1 Score: 180.3 bits (456), Expect = 8.5e-46 Identity = 96/108 (88.89%), Postives = 104/108 (96.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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