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Lsi01G019130 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAGTTCTGTTGCACCTCACAGGTGTAAGAAGAAATATAAATAAATAGAGATGGGTTAGCAATTAAATGATAACTTGTGAAATTTCGTTCTGATTAAGGGAGAAGAACAAGAATTTTAATAACACTACTACAGATGTTGGATACTTTTGTCATAATTAGTAATTACTAAGAACCGCCAAAAGGACTATCGTGTAAGGGCATCCCTATCCCTTCTCTTGTGAAAACTTTCAGGCAATAACTAATTGACTCATTGAGTCTTTGGGAAGAAAAACATCAGATAATCATTGGAAGGGGAGGGGAAGGGATGGGGGGAGGGGACGTGGTGCCTATTATTGCTTTGTTCATTCTTTCCAAACGTTCTTATTCCATGTAGCTATTCCAGTACTATACTGAAATTTAATTCCATTTGATAGGTCCTCCATCAACCGAGGTATGGCAACTTGTTTGAATCTTGCATCCGTTAAATCAGTGTAATTGATTTTCAATGATGGATATAGACCTACTGCTGCTCTTGTTTAAGAATAAAACTAAAGTTTTCAAATGTAAGATAACCTATTGTATGAACCTTGGATCCTACAAAATGTCTTTTCTAGATTCTCAGTTATGGATAGACGTCTACTGCTGATATTTTGTAAGAATAAAACTAAAATTTTCTAATGTAAGTTTCTATTGCACTAGTTGGACTGAGAACTTCTTTCAAGTATTTCTCTTTTTTTTTGTGTGTATGTGTGTGTGTGTTTTTATGACATGTATTATCCGGATACAATGTCTCAGGTTCTTGAAGAGGGAGCATCTTATTGATGTCACTGAGGTGTTTAGAGCTCTTAAACGTGAGAAATATTTCCGTTTGGCCAAGCTTATCTTCTACTTGCTTCTGTTCCTCATAGTAATATTCAGGTCAGTCTGCATTTTCCACTCTCATTCCTCTCAACTATTTAGAAGGTGGGATTTTTCTGATTGAAGTTTTCCTTATTGTTTTCTGTATAGAATAATAATGGTTGCAGGAATGAAATCTGTTTTTGACTCTGCACATGAAGATATAGACATTCGCTCCACTGTTCTCGAATTCTAG ATGGAAAGTTCTGTTGCACCTCACAGGTTCTTGAAGAGGGAGCATCTTATTGATGTCACTGAGGTGTTTAGAGCTCTTAAACGTGAGAAATATTTCCGTTTGGCCAAGCTTATCTTCTACTTGCTTCTGTTCCTCATAGTAATATTCAGAATAATAATGGTTGCAGGAATGAAATCTGTTTTTGACTCTGCACATGAAGATATAGACATTCGCTCCACTGTTCTCGAATTCTAG ATGGAAAGTTCTGTTGCACCTCACAGGTTCTTGAAGAGGGAGCATCTTATTGATGTCACTGAGGTGTTTAGAGCTCTTAAACGTGAGAAATATTTCCGTTTGGCCAAGCTTATCTTCTACTTGCTTCTGTTCCTCATAGTAATATTCAGAATAATAATGGTTGCAGGAATGAAATCTGTTTTTGACTCTGCACATGAAGATATAGACATTCGCTCCACTGTTCTCGAATTCTAG MESSVAPHRFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVAGMKSVFDSAHEDIDIRSTVLEF Homology
BLAST of Lsi01G019130 vs. ExPASy TrEMBL
Match: A0A5A7T2J2 (Protein cornichon-like protein 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G00720 PE=3 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.5e-23 Identity = 65/69 (94.20%), Postives = 67/69 (97.10%), Query Frame = 0
BLAST of Lsi01G019130 vs. ExPASy TrEMBL
Match: A0A6J1HTE7 (protein cornichon homolog 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467288 PE=3 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 1.9e-23 Identity = 63/68 (92.65%), Postives = 66/68 (97.06%), Query Frame = 0
BLAST of Lsi01G019130 vs. ExPASy TrEMBL
Match: A0A6J1ESA6 (protein cornichon homolog 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435524 PE=3 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 1.9e-23 Identity = 63/68 (92.65%), Postives = 66/68 (97.06%), Query Frame = 0
BLAST of Lsi01G019130 vs. ExPASy TrEMBL
Match: A0A6J1HRR4 (protein cornichon homolog 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111466123 PE=3 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 2.5e-23 Identity = 63/68 (92.65%), Postives = 65/68 (95.59%), Query Frame = 0
BLAST of Lsi01G019130 vs. ExPASy TrEMBL
Match: A0A6J1EB17 (protein cornichon homolog 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111432423 PE=3 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 2.5e-23 Identity = 63/68 (92.65%), Postives = 65/68 (95.59%), Query Frame = 0
BLAST of Lsi01G019130 vs. NCBI nr
Match: XP_038883915.1 (protein cornichon homolog 1 isoform X1 [Benincasa hispida]) HSP 1 Score: 120.6 bits (301), Expect = 6.1e-24 Identity = 66/68 (97.06%), Postives = 67/68 (98.53%), Query Frame = 0
BLAST of Lsi01G019130 vs. NCBI nr
Match: KAA0035787.1 (protein cornichon-like protein 1 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 118.2 bits (295), Expect = 3.0e-23 Identity = 65/69 (94.20%), Postives = 67/69 (97.10%), Query Frame = 0
BLAST of Lsi01G019130 vs. NCBI nr
Match: XP_022928680.1 (protein cornichon homolog 1-like isoform X1 [Cucurbita moschata] >KAG6603241.1 Protein cornichon-like 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 117.9 bits (294), Expect = 4.0e-23 Identity = 63/68 (92.65%), Postives = 66/68 (97.06%), Query Frame = 0
BLAST of Lsi01G019130 vs. NCBI nr
Match: XP_022967916.1 (protein cornichon homolog 1-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 117.9 bits (294), Expect = 4.0e-23 Identity = 63/68 (92.65%), Postives = 66/68 (97.06%), Query Frame = 0
BLAST of Lsi01G019130 vs. NCBI nr
Match: XP_023543605.1 (protein cornichon homolog 1-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 117.9 bits (294), Expect = 4.0e-23 Identity = 63/68 (92.65%), Postives = 66/68 (97.06%), Query Frame = 0
BLAST of Lsi01G019130 vs. TAIR 10
Match: AT3G12180.1 (Cornichon family protein ) HSP 1 Score: 42.7 bits (99), Expect = 1.5e-04 Identity = 23/46 (50.00%), Postives = 33/46 (71.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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