Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACCGTAAGCTTCCAAGCAGTGGGAGGAGACCAGGACTCTGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCATAGGCAGTGGCTTGGTTAAGGGAACCCACCGGAGCCGTAGCGAAAGCGAGTCTTCATGGGGCAATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAATGCGTTGAGGCGCAGCAGTTGACTGGACATCTAGGGGTAAAGCACTGTTTCGGTGCGGGCCGCGAGAGCGGTACCAAATCGAGGCAAACTCTGAATACTAGATATGATCTCAAAATAACAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTCGAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATAAAGGAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCACCCTTGAAAGAGTGCGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGAACGGGGCTAAGCGATCTGCCGAAGCTGTGGGATGTAAAAATGCATCGGTAGGGGAGCGTTCCGCCTTAGAGGGAAGCACCTGCGCGAGCAGTGGTGGACGAAGCGGAAGCGAGAATGTCGGCTTGAGTAACGCAAACATTGGTGAGAATCCAATGCCCCGAAAACCTAAGGGTTCCTCCGCAAGGTTCGTCCACGGAGGGTGAGTCAGGGCCTAAGATCAGGCCGAAAGGCGTAGTCGATGGACAACAGGTGAATATTCCTGTACTACCCCTTGTTGGTCCCGAGGGACGGAGGAGGCTAGGTTAGCCGAAAGATGGTTATCGGTTCAAGGACGCAAGGTGCCCCTGTTTTTTCAGGGTAAGAAGGGGTAGAGAAAATACCTCGAGCCAATGTTCGAGTACCAGGCGCTACGGCGCTGAAGTAACCCATGCCATACTCCCAGGAAAAGCTCGAACGACCTTCAACAAAAGGGTACCTGTACCCGAAACCGACACAGGTGGGTAGGTAGAGAATACCTAGGGGCGCGAGACAACTCTCTCTAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAAGGGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGTAAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAAGGAAGTTGGTGACCTGATGACAGGGGAGCCGGCGACCGAAGCCCCGGTGAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCCGCACGAAAGGCGTAACGATCTGGGCACTGTCTCGGAGAGAGGCTCGGTGAAATAGACATGTCTGTGAAGATGCGGACTACCTGCACCTGGACAGAAAGACCCTATGAAGCTTCACTGTTCCCTGGGATTGGCTTTGGGCCTTTCCTGCGCAGCTTAGGTGGAAGGCGAAGAAGGCCCCCTTCCGGGGGGGCCCGAGCCATCAGTGAGATACCACTCTGGAAGAGCTAGAATTCTAACCTTGTGTCAGGACCTACGGGCCAAGGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGCGTGCAAAGGTTTCCTCGGGCCAGACGGAGATTGGCCCTCGAGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGGTGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATAACAGGCTGATCTTCCCCAAGAGCTCACATCGACGGGAAGGTTTGGCACCTCGATGTCGGCTCTTCGCCACCTGGGGCTGTAGTATGTTCCAAGGGTTGGGCTGTTCGCCCATTAAAGCGGTACGTGAGCTGGGTTCAGAACGTCGTGAGACAGTTCGGTCCATATCCGGTGTGGGCGTTAGAGCATTGAGAGGACCTTTCCCTAGTACGAGAGGACCGGGAAGGACGCACCTCTGGTGTACCAGTTATCGTGCCCACGGTAAACGCTGGGTAGCCAAGTGCGGAGCGGATAACTGCTGAAAGCATCTAAGTAGTAAGCCCACCCCAAGATGAGTGCTCTCCTATTCCGACTTCCCCAGAGCCTCCGGTAGCACAGCCGAGACAGCGATGGGTTCTCTGCCCCTGCGGGGATGGAGCGACAGAAGTTTTGAGAATTCAAGAGAAGGTCACGGCGAGATGA
mRNA sequence
ATGAAACCGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAATGCGTTGAGGCGCAGCAGTTGACTGGACATCTAGGGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTCGAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATAAAGGAGATGAACGGGGCTAAGCGATCTGCCGAAGCTGTGGGATGTAAAAATGCATCGGTAGGGGAGCGTTCCGCCTTAGAGGGAAGCACCTGCGCGAGCAGTGGTGGACGAAGCGGAAGCGAGAATGTCGGCTTGAGTAACGCAAACATTGGTGAGAATCCAATGCCCCGAAAACCTAAGGGTTCCTCCGCAAGGTTCGTCCACGGAGGGGTAAGAAGGGGTAGAGAAAATACCTCGAGCCAATGTTCGAGTACCAGGCGCTACGGCGCTGAAGTAACCCATGCCATACTCCCAGGAAAAGCTCGAACGACCTTCAACAAAAGGGTACCTGTACCCGAAACCGACACAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAAGGAAGTTGGTGACCTGATGACAGGGGAGCCGGCGACCGAAGCCCCGGTGAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCGGTTCCGACCCGCACGAAAGGCGTAACGATCTGGGCACTGTCTCGGAGAGAGGCTCGGTGGAAGGCGAAGAAGGCCCCCTTCCGGGGGGGCCCGAGCCATCAGTGAGATACCACTCTGGAAGAGCTAGAATTCTAACCTTGTGTCAGGACCTACGGGCCAAGGGACAGTCTCAGGCCTCCCAAAAGGTAACGGAGGCGTGCAAAGGTTTCCTCGGGCCAGACGGAGATTGGCCCTCGAGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGGTGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAAGCTCACATCGACGGGAAGGTTTGGCACCTCGATGTCGGCTCTTCGCCACCTGGGGCTGTAGTATGTTCCAAGGGTTGGGCTGTTCGCCCATTAAAGCGGTACGTGAGCTGGGTTCAGAACGTCGTGAGACAGTTCGGTCCATATCCGGTGTGGGCGTTAGAGCATTGAGAGGACCTTTCCCTAGTACGAGAGGACCGGGAAGGACGCACCTCTGGTGTACCAGTTATCGTGCCCACGTAAGCCCACCCCAAGATGAGTGCTCTCCTATTCCGACTTCCCCAGAGCCTCCGGTAGCACAGCCGAGACAGCGATGGGTTCTCTGCCCCTGCGGGGATGGAGCGACAGAAGTTTTGAGAATTCAAGAGAAGGTCACGGCGAGATGA
Coding sequence (CDS)
ATGAAACCGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAATGCGTTGAGGCGCAGCAGTTGACTGGACATCTAGGGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTCGAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATAAAGGAGATGAACGGGGCTAAGCGATCTGCCGAAGCTGTGGGATGTAAAAATGCATCGGTAGGGGAGCGTTCCGCCTTAGAGGGAAGCACCTGCGCGAGCAGTGGTGGACGAAGCGGAAGCGAGAATGTCGGCTTGAGTAACGCAAACATTGGTGAGAATCCAATGCCCCGAAAACCTAAGGGTTCCTCCGCAAGGTTCGTCCACGGAGGGGTAAGAAGGGGTAGAGAAAATACCTCGAGCCAATGTTCGAGTACCAGGCGCTACGGCGCTGAAGTAACCCATGCCATACTCCCAGGAAAAGCTCGAACGACCTTCAACAAAAGGGTACCTGTACCCGAAACCGACACAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAAGGAAGTTGGTGACCTGATGACAGGGGAGCCGGCGACCGAAGCCCCGGTGAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCGGTTCCGACCCGCACGAAAGGCGTAACGATCTGGGCACTGTCTCGGAGAGAGGCTCGGTGGAAGGCGAAGAAGGCCCCCTTCCGGGGGGGCCCGAGCCATCAGTGAGATACCACTCTGGAAGAGCTAGAATTCTAACCTTGTGTCAGGACCTACGGGCCAAGGGACAGTCTCAGGCCTCCCAAAAGGTAACGGAGGCGTGCAAAGGTTTCCTCGGGCCAGACGGAGATTGGCCCTCGAGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGGTGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAAGCTCACATCGACGGGAAGGTTTGGCACCTCGATGTCGGCTCTTCGCCACCTGGGGCTGTAGTATGTTCCAAGGGTTGGGCTGTTCGCCCATTAAAGCGGTACGTGAGCTGGGTTCAGAACGTCGTGAGACAGTTCGGTCCATATCCGGTGTGGGCGTTAGAGCATTGAGAGGACCTTTCCCTAGTACGAGAGGACCGGGAAGGACGCACCTCTGGTGTACCAGTTATCGTGCCCACGTAAGCCCACCCCAAGATGAGTGCTCTCCTATTCCGACTTCCCCAGAGCCTCCGGTAGCACAGCCGAGACAGCGATGGGTTCTCTGCCCCTGCGGGGATGGAGCGACAGAAGTTTTGAGAATTCAAGAGAAGGTCACGGCGAGATGA
Protein sequence
MKPGEMPLEPRASWFSPKCVEAQQLTGHLGGSRSASETMGDKLHRREGNSPDHQLRPLNDRSVIKEMNGAKRSAEAVGCKNASVGERSALEGSTCASSGGRSGSENVGLSNANIGENPMPRKPKGSSARFVHGGVRRGRENTSSQCSSTRRYGAEVTHAILPGKARTTFNKRVPVPETDTDHVWGLTPAQCRKVKEVGDLMTGEPATEAPVNGGRNYNGPKVAKFLVGSDPHERRNDLGTVSERGSVEGEEGPLPGGPEPSVRYHSGRARILTLCQDLRAKGQSQASQKVTEACKGFLGPDGDWPSSAKAEGSLTARPTRRAGTKVGLSDPTVPSGRAVAQRIKSSHRREGLAPRCRLFATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTRGPGRTHLWCTSYRAHVSPPQDECSPIPTSPEPPVAQPRQRWVLCPCGDGATEVLRIQEKVTAR
Homology
BLAST of Lsi01G019070 vs. ExPASy TrEMBL
Match:
A0A6N2NAY5 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS480550 PE=4 SV=1)
HSP 1 Score: 705.7 bits (1820), Expect = 1.3e-199
Identity = 388/495 (78.38%), Postives = 395/495 (79.80%), Query Frame = 0
Query: 6 MPLEPRASWFSPKCVEAQQLTGHLGGSRSASETMGDKLHRREGNSPDHQLRPLNDRSVIK 65
MPLEPRASWFSPKCVEAQQLTGHLGGSRSASETMGDKLHRREGNSPDHQLRPLNDRSVIK
Sbjct: 1 MPLEPRASWFSPKCVEAQQLTGHLGGSRSASETMGDKLHRREGNSPDHQLRPLNDRSVIK 60
Query: 66 EMNGAKRSAEAVGCKNASVGERSALEGSTCASSGGRSGSENVGLSNANIGENPMPRKPKG 125
EMNGAKRSAEAVGCKNAS GST AS GGRSGSENVGLSNANIGENPMPRKPKG
Sbjct: 61 EMNGAKRSAEAVGCKNAS--------GSTRASGGGRSGSENVGLSNANIGENPMPRKPKG 120
Query: 126 SSARFVHGGVRRGRENTSSQCSSTRRYGAEVTHAILPGKARTTFNKRVPVPETDTDHVWG 185
SSARFVHGGVRRGREN SSQC STRRYGAEVTHAILPGKARTTFNK P+ T V
Sbjct: 121 SSARFVHGGVRRGRENASSQCPSTRRYGAEVTHAILPGKARTTFNKGYLYPK-PTQGVAV 180
Query: 186 LTPAQ-------CRKV------KEVGDLMTGEPATEAPVNGGRNYNGPKVAKFLVG---S 245
P + RKV + + GEPATEAPVNGGRNYNGPKVAKFLVG
Sbjct: 181 TRPGRLFTKNTGLRKVVRPCMGADACPVPEGEPATEAPVNGGRNYNGPKVAKFLVGLGEI 240
Query: 246 DPHERRNDLGTVSER----------------GSVEG-EEGPLPGGPEPSVRYHSGRARIL 305
D + T +ER S+ G P GG EPSVRYHSGRARIL
Sbjct: 241 DMSVKMRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRRRPPSGGSEPSVRYHSGRARIL 300
Query: 306 TLCQDLRAKGQSQASQKVTEACKGFLGPDGDWPSSAKAEGSLTARPTRRAGTKVGLSDPT 365
TLCQDLRAKGQSQASQKVTEACKGFLGPDGDWPSSAKAEGSLTARPTRRAGTKVGLSDPT
Sbjct: 301 TLCQDLRAKGQSQASQKVTEACKGFLGPDGDWPSSAKAEGSLTARPTRRAGTKVGLSDPT 360
Query: 366 VPSGRAVAQRIKSSHRREGLAPRCRLFATWGCSMFQGLGCSPIKAVRELGSERRETVRSI 425
VPSGRAVAQRIKSSHRREGLAPRCRLFATWGCSMFQGLGCSPIKAVRELGSERRETVRSI
Sbjct: 361 VPSGRAVAQRIKSSHRREGLAPRCRLFATWGCSMFQGLGCSPIKAVRELGSERRETVRSI 420
Query: 426 SGVGVRALRGPFPSTRGPGRTHLWCTSYRAHVSPPQDECSPIPTSPEPPVAQPRQRWVLC 468
SGVGVRALRGPFPSTRGPGRTHLWCTSY AH EPPVAQPRQR VLC
Sbjct: 421 SGVGVRALRGPFPSTRGPGRTHLWCTSYCAH---------------EPPVAQPRQRRVLC 471
BLAST of Lsi01G019070 vs. ExPASy TrEMBL
Match:
A0A2N9GIA5 (Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26796 PE=3 SV=1)
HSP 1 Score: 511.1 bits (1315), Expect = 4.8e-141
Identity = 298/474 (62.87%), Postives = 300/474 (63.29%), Query Frame = 0
Query: 4 GEMPLEPRASWFSPKCVEAQQLTGHLGGSRSASETMGDKLHRREGNSPDHQLRPLNDRSV 63
GEMPLEPRASWFSPKCVEAQQLTGHLGGSRSASETMGDKLHRREGNSPDHQLRPLNDRSV
Sbjct: 952 GEMPLEPRASWFSPKCVEAQQLTGHLGGSRSASETMGDKLHRREGNSPDHQLRPLNDRSV 1011
Query: 64 IKEMNGAKRSAEAVGCKNASVGERSALEGSTCASSGGRSGSENVGLSNANIGENPMPRKP 123
IKEMNGAKRSAEAVGCK ASVGERSALEGST S GGRSGSENVGLSNANIGENPMPRKP
Sbjct: 1012 IKEMNGAKRSAEAVGCKKASVGERSALEGSTRESGGGRSGSENVGLSNANIGENPMPRKP 1071
Query: 124 KGSSARFVHGGVRRGRENTSSQCSSTRRYGAEVTHAILPGKARTTFNKRVPVPETDTDHV 183
KGSSARFVHGGVRRGREN SSQCSSTRRYGAEVTHAILPGKARTTFNKR
Sbjct: 1072 KGSSARFVHGGVRRGRENASSQCSSTRRYGAEVTHAILPGKARTTFNKR----------- 1131
Query: 184 WGLTPAQCRKVKEVGDLMTGEPATEAPVNGGRNYNGPKVAKFLVGSDPHERRNDLGTVSE 243
CRKVKEVGDLMTGEPATEAPVNGGRNYNGPKVAKFLVG
Sbjct: 1132 -------CRKVKEVGDLMTGEPATEAPVNGGRNYNGPKVAKFLVG--------------- 1191
Query: 244 RGSVEGEEGPLPGGPEPSVRYHSGRARILTLCQDLRAKGQSQASQKVTEACKGFLGPDGD 303
+KVTEACKGFLGPDGD
Sbjct: 1192 ------------------------------------------PPKKVTEACKGFLGPDGD 1251
Query: 304 WPSSAKAEGSLTARPTRRAGTKVGLSDPTVPSGRAVAQRIKSSHRREGLAPRCRLFATWG 363
WPSSAKAEGSLTARPTRRAGTKVGLSDPTVPSGRAVAQRIK +
Sbjct: 1252 WPSSAKAEGSLTARPTRRAGTKVGLSDPTVPSGRAVAQRIKPT----------------- 1270
Query: 364 CSMFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTRGPGRTHLWCTSYRAH 423
Sbjct: 1312 ------------------------------------------------------------ 1270
Query: 424 VSPPQDECSPIPTSPEPPVAQPRQRWV------LCPCGDGATEVLRIQEKVTAR 472
PQDECSPIPTSPEPPVAQP LCPCGDGATEVLRIQEKVTAR
Sbjct: 1372 ---PQDECSPIPTSPEPPVAQPPSSTAETAMGSLCPCGDGATEVLRIQEKVTAR 1270
BLAST of Lsi01G019070 vs. ExPASy TrEMBL
Match:
A0A2N9G3L9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS22064 PE=4 SV=1)
HSP 1 Score: 500.0 bits (1286), Expect = 1.1e-137
Identity = 287/414 (69.32%), Postives = 292/414 (70.53%), Query Frame = 0
Query: 66 EMNGAKRSAEAVGCKNASVGERSALEGSTCASSGGRSGSENVGLSNANIGENPMPRKPKG 125
EMNGAKRSAEAVGCK ASVGERSALEGST S GGRSGSENVGLSNANIGENPMPRKPKG
Sbjct: 630 EMNGAKRSAEAVGCKKASVGERSALEGSTRESGGGRSGSENVGLSNANIGENPMPRKPKG 689
Query: 126 SSARFVHGGVRRGRENTSSQCSSTRRYGAEVTHAILPGKARTTFNKRVPVPETDTDHVWG 185
SSARFVHGGVRRGREN SSQCSSTRRYGAEVTHAILPGKARTTFNKRVPVPETDT+ +
Sbjct: 690 SSARFVHGGVRRGRENASSQCSSTRRYGAEVTHAILPGKARTTFNKRVPVPETDTERPY- 749
Query: 186 LTPAQCRKVKEVGDLMTGEPATEAPVNGGRNYNGPKVAKFLVGSDPHERRNDLGTVSERG 245
EA + G +G P R
Sbjct: 750 ----------------------EASLFPG------------IGFGPFLR----------- 809
Query: 246 SVEGEEGPLPGGPEPSVRYHSGRARILTLCQDLRAKGQSQASQKVTEACKGFLGPDGDWP 305
S+ G P G G ASQKVTEACKGFLGPDGDWP
Sbjct: 810 SLGGGRRRPPSG------------------------GARAASQKVTEACKGFLGPDGDWP 869
Query: 306 SSAKAEGSLTARPTRRAGTKVGLSDPTVPSGRAVAQRIK--------SSHRREGLAPRCR 365
SSAKAEGSLTARPTRRAGTKVGLSDPTVPS QRIK SSHRREGLAPRCR
Sbjct: 870 SSAKAEGSLTARPTRRAGTKVGLSDPTVPS----LQRIKVTLGITGWSSHRREGLAPRCR 929
Query: 366 LFATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTRGPGRTHLWC 425
LFATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTRGPGRTHLWC
Sbjct: 930 LFATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTRGPGRTHLWC 954
Query: 426 TSYRAHVSPPQDECSPIPTSPEPPVAQPRQRWVLCPCGDGATEVLRIQEKVTAR 472
TSYRAH EPPVAQPRQRWVLCPCGDGATEVLRIQEKVTAR
Sbjct: 990 TSYRAH---------------EPPVAQPRQRWVLCPCGDGATEVLRIQEKVTAR 954
BLAST of Lsi01G019070 vs. ExPASy TrEMBL
Match:
A0A2N9HJU4 (Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40354 PE=3 SV=1)
HSP 1 Score: 484.6 bits (1246), Expect = 4.8e-133
Identity = 265/341 (77.71%), Postives = 265/341 (77.71%), Query Frame = 0
Query: 4 GEMPLEPRASWFSPKCVEAQQLTGHLGGSRSASETMGDKLHRREGNSPDHQLRPLNDRSV 63
GEMPLEPRASWFSPKCVEAQQLTGHLGGSRSASETMGDKLHRREGNSPDHQLRPLNDRSV
Sbjct: 189 GEMPLEPRASWFSPKCVEAQQLTGHLGGSRSASETMGDKLHRREGNSPDHQLRPLNDRSV 248
Query: 64 IKEMNGAKRSAEAVGCKNASVGERSALEGSTCASSGGRSGSENVGLSNANIGENPMPRKP 123
IKEMNGAKRSAEAVGCK ASVGERSALEGST S GGRSGSENVGLSNANIGENPMPRKP
Sbjct: 249 IKEMNGAKRSAEAVGCKKASVGERSALEGSTRESGGGRSGSENVGLSNANIGENPMPRKP 308
Query: 124 KGSSARFVHGGVRRGRENTSSQCSSTRRYGAEVTHAILPGKARTTFNKRVPVPETDTDHV 183
KGSSARFVHGGVRRGREN SSQCSSTRRYGAEVTHAILPGKARTTFNKR
Sbjct: 309 KGSSARFVHGGVRRGRENASSQCSSTRRYGAEVTHAILPGKARTTFNKR----------- 368
Query: 184 WGLTPAQCRKVKEVGDLMTGEPATEAPVNGGRNYNGPKVAKFLVGSDPHERRNDLGTVSE 243
CRKVKEVGDLMTGEPATEAPVNGGRNYNGPKVAKFLVG RR G
Sbjct: 369 -------CRKVKEVGDLMTGEPATEAPVNGGRNYNGPKVAKFLVGLGGGRRRPPSG---- 428
Query: 244 RGSVEGEEGPLPGGPEPSVRYHSGRARILTLCQDLRAKGQSQASQKVTEACKGFLGPDGD 303
G ASQKVTEACKGFLGPDGD
Sbjct: 429 --------------------------------------GARAASQKVTEACKGFLGPDGD 469
Query: 304 WPSSAKAEGSLTARPTRRAGTKVGLSDPTVPSGRAVAQRIK 345
WPSSAKAEGSLTARPTRRAGTKVGLSDPTVPSGRAVAQRIK
Sbjct: 489 WPSSAKAEGSLTARPTRRAGTKVGLSDPTVPSGRAVAQRIK 469
BLAST of Lsi01G019070 vs. ExPASy TrEMBL
Match:
A0A2N9I678 (Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS49399 PE=3 SV=1)
HSP 1 Score: 484.6 bits (1246), Expect = 4.8e-133
Identity = 265/341 (77.71%), Postives = 265/341 (77.71%), Query Frame = 0
Query: 4 GEMPLEPRASWFSPKCVEAQQLTGHLGGSRSASETMGDKLHRREGNSPDHQLRPLNDRSV 63
GEMPLEPRASWFSPKCVEAQQLTGHLGGSRSASETMGDKLHRREGNSPDHQLRPLNDRSV
Sbjct: 580 GEMPLEPRASWFSPKCVEAQQLTGHLGGSRSASETMGDKLHRREGNSPDHQLRPLNDRSV 639
Query: 64 IKEMNGAKRSAEAVGCKNASVGERSALEGSTCASSGGRSGSENVGLSNANIGENPMPRKP 123
IKEMNGAKRSAEAVGCK ASVGERSALEGST S GGRSGSENVGLSNANIGENPMPRKP
Sbjct: 640 IKEMNGAKRSAEAVGCKKASVGERSALEGSTRESGGGRSGSENVGLSNANIGENPMPRKP 699
Query: 124 KGSSARFVHGGVRRGRENTSSQCSSTRRYGAEVTHAILPGKARTTFNKRVPVPETDTDHV 183
KGSSARFVHGGVRRGREN SSQCSSTRRYGAEVTHAILPGKARTTFNKR
Sbjct: 700 KGSSARFVHGGVRRGRENASSQCSSTRRYGAEVTHAILPGKARTTFNKR----------- 759
Query: 184 WGLTPAQCRKVKEVGDLMTGEPATEAPVNGGRNYNGPKVAKFLVGSDPHERRNDLGTVSE 243
CRKVKEVGDLMTGEPATEAPVNGGRNYNGPKVAKFLVG RR G
Sbjct: 760 -------CRKVKEVGDLMTGEPATEAPVNGGRNYNGPKVAKFLVGLGGGRRRPPSG---- 819
Query: 244 RGSVEGEEGPLPGGPEPSVRYHSGRARILTLCQDLRAKGQSQASQKVTEACKGFLGPDGD 303
G ASQKVTEACKGFLGPDGD
Sbjct: 820 --------------------------------------GARAASQKVTEACKGFLGPDGD 860
Query: 304 WPSSAKAEGSLTARPTRRAGTKVGLSDPTVPSGRAVAQRIK 345
WPSSAKAEGSLTARPTRRAGTKVGLSDPTVPSGRAVAQRIK
Sbjct: 880 WPSSAKAEGSLTARPTRRAGTKVGLSDPTVPSGRAVAQRIK 860
BLAST of Lsi01G019070 vs. NCBI nr
Match:
KAF1876778.1 (hypothetical protein Lal_00043708 [Lupinus albus])
HSP 1 Score: 482.6 bits (1241), Expect = 3.8e-132
Identity = 279/424 (65.80%), Postives = 287/424 (67.69%), Query Frame = 0
Query: 4 GEMPLEPRASWFSPKCVEAQQLTGHLGGSRSASETMGDKLHRREGNSPDHQLRPLNDRSV 63
GEMPLEPRASWFSPKCVEAQQLTGHLG
Sbjct: 23 GEMPLEPRASWFSPKCVEAQQLTGHLG--------------------------------- 82
Query: 64 IKEMNGAKRSAEAVGCKNASVGERSALEGSTCASSGGRSGSENVGLSNANIGENPMPRKP 123
MNGAKRSAEAVGCKN SVGERSALEG T ASSGGRSGSENVGLSNAN+GENPMPRKP
Sbjct: 83 ---MNGAKRSAEAVGCKNLSVGERSALEGRTRASSGGRSGSENVGLSNANVGENPMPRKP 142
Query: 124 KGSSARFVHGGVRRGRENTSSQCSSTRRYGAEVTHAILPGKARTTFNKRVPVPETDT--- 183
KGSSARFVHGGVRRGREN SSQCSSTRRYGAEVTHAILPGKARTTFNKRVPVPETDT
Sbjct: 143 KGSSARFVHGGVRRGRENASSQCSSTRRYGAEVTHAILPGKARTTFNKRVPVPETDTGVP 202
Query: 184 DHVWGLT-PAQCRKVKEVGDLMTGEPATEAPVNGGRNYNGPKVAKFLVGSDPHERRNDLG 243
H G + A+ ++ + EPATEAPVNGGRNYNGPKVAKFLVG RR
Sbjct: 203 PHKGGRSDQARATVYQKHRSPQSREPATEAPVNGGRNYNGPKVAKFLVGLGGGRRR---- 262
Query: 244 TVSERGSVEGEEGPLPGGPEPSVRYHSGRARILTLCQDLRAKGQSQASQKVTEACKGFLG 303
P GG EPSVRYHSGRARILTLCQDLRAKGQ Q
Sbjct: 263 -------------PPSGGLEPSVRYHSGRARILTLCQDLRAKGQFQG------------- 322
Query: 304 PDGDWPSSAKAEGSLTARPTRRAGTKVGLSDPTVPSGRAVAQRIKSSHRREGLAPRCRLF 363
RR+ K D R + KSSHRREGLAPRCRLF
Sbjct: 323 --------------------RRSTDKSYSRD-----NRLIFP--KSSHRREGLAPRCRLF 353
Query: 364 ATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTRGPGRTHLWCTS 423
ATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTRGPGRTH WCTS
Sbjct: 383 ATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTRGPGRTHPWCTS 353
BLAST of Lsi01G019070 vs. NCBI nr
Match:
TKS00107.1 (hypothetical protein D5086_0000186410 [Populus alba])
HSP 1 Score: 473.8 bits (1218), Expect = 1.7e-129
Identity = 283/440 (64.32%), Postives = 297/440 (67.50%), Query Frame = 0
Query: 39 MGDKLHRREGNSPDHQLRPLNDRSVIKEMNGAKRSAEAVGCKNASVGERSALEGSTCASS 98
MGDKLHRREGNSPDHQLRPLNDRSVIKE+ G +R +++ GE G
Sbjct: 1 MGDKLHRREGNSPDHQLRPLNDRSVIKEV-GVQRQPGG----SSTEGE----SGPKIRPK 60
Query: 99 GGRSGSENVGLSNANIGENPMPRKPKGSSARFVHGGVRRGRENTSSQCSSTRRYGAEVTH 158
G G + ANI P+ + RG E RRYGAEVTH
Sbjct: 61 GVVDGQQ------ANIPVLPL---------------LVRGTE-------EARRYGAEVTH 120
Query: 159 AILPGKARTTFNKRVPVPETDTDHVWGLTPAQCRKVKEVGDLM---TGEPATEAPVNGGR 218
AILPGKARTTFNKRVPVPETDT G+ P + + + G L TGEPATEAPVNGGR
Sbjct: 121 AILPGKARTTFNKRVPVPETDT----GVPPHKGGRSDQAGRLFTKNTGEPATEAPVNGGR 180
Query: 219 NYNGPKVAKFLVGSDPHERRNDLGTVSERGSVEGEEGPLPGGPEPSVRYHSGRARILTLC 278
NYNGPKVAKFLVG RR PL GG EPSVRYHSGRARILTLC
Sbjct: 181 NYNGPKVAKFLVGLGGRRRR-----------------PLRGGSEPSVRYHSGRARILTLC 240
Query: 279 QDLRAKGQSQASQKVTEACKGFLGPDGDWPSSAKAEGSLTARPTRRAGTKVGLSDPTVPS 338
QDLRAKGQSQASQKVTEACKGFLGPDGDWPSSAKAEGSLTARPTRRAGTKVGLSDPT
Sbjct: 241 QDLRAKGQSQASQKVTEACKGFLGPDGDWPSSAKAEGSLTARPTRRAGTKVGLSDPT--- 300
Query: 339 GRAVAQRIKSSHRREGLAPRCRLFATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGV 398
SSHRREGLAPRCRLFATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGV
Sbjct: 301 ---------SSHRREGLAPRCRLFATWGCSMFQGLGCSPIKAVRELGSERRETVRSISGV 357
Query: 399 GVRALRGPFPSTRGPGRTHLWCTSYRAH----VSPPQDECSPIPTSPEPPVAQPRQRWVL 458
GVRALRGPFPSTRGPGRTHLWCTSY AH V+ + T
Sbjct: 361 GVRALRGPFPSTRGPGRTHLWCTSYCAHGKRWVAKASGSTAETATGS------------- 357
Query: 459 CPCGDGATEVLRIQEKVTAR 472
PCGDGATEVLRIQEKVTAR
Sbjct: 421 LPCGDGATEVLRIQEKVTAR 357
BLAST of Lsi01G019070 vs. NCBI nr
Match:
QCE14661.1 (hypothetical protein DEO72_LG11g1664 [Vigna unguiculata])
HSP 1 Score: 434.9 bits (1117), Expect = 9.0e-118
Identity = 255/409 (62.35%), Postives = 267/409 (65.28%), Query Frame = 0
Query: 12 ASWFSPKCVEAQQLTGHLGGSRSASETMGDKLHRREGNSPDHQLRPLNDRSVIK----EM 71
ASWFSPK VEAQQLT HLG S RE + Q LN R +K +M
Sbjct: 97 ASWFSPKSVEAQQLTRHLGVKHCFSA-------GRESGTKSRQ--TLNTRYDLKIPRVKM 156
Query: 72 NGAKRSAEAVGCKNASVGERSALEGSTCASSGGRSGSENVGLSNANIGENPMPRKPKGSS 131
NGAKRSAEAVGC+N SVGE S L G T ASS GRSGSEN+GLSN N+GENPMPRKPKGSS
Sbjct: 157 NGAKRSAEAVGCQNESVGECSVLGGRTRASSAGRSGSENIGLSNVNVGENPMPRKPKGSS 216
Query: 132 ARFVHGGVRRGRENTSSQCSSTRRYGAEVTHAILPGKARTTFNKRVPVPETDTDHVWGLT 191
ARFVHGGV RGREN SSQ SSTRRY AEV HAILPGKARTTFNK V VPETDT W +
Sbjct: 217 ARFVHGGVIRGRENASSQSSSTRRYNAEVIHAILPGKARTTFNKWVLVPETDT---W-VD 276
Query: 192 PAQCRKVKEVGDLMTGEPATEAPVNGGRNYNGPKVAKFLVGSDPHERRNDLGTVSERGSV 251
QCRKVKEVGDLM GEP T+AP+NGGRNYNGPKVAKFLVG +RR
Sbjct: 277 ACQCRKVKEVGDLMKGEPTTKAPMNGGRNYNGPKVAKFLVGLGGGQRR------------ 336
Query: 252 EGEEGPLPGGPEPSVRYHSGRARILTLCQDLRAKGQSQASQKVTEACKGFLGPDGDWPSS 311
P GG EPSVRYHSGRARILTLCQDLRA GQSQ
Sbjct: 337 -----PSSGGQEPSVRYHSGRARILTLCQDLRAAGQSQ---------------------- 396
Query: 312 AKAEGSLTARPTRRAGTKVGLSDPTVPSGRAVAQRIKSSHRREGLAPRCRLFATWGCSMF 371
SSHRREGLAPRCRLF TWGCSMF
Sbjct: 397 -------------------------------------SSHRREGLAPRCRLFTTWGCSMF 416
Query: 372 QGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTRGPGRTHLW 417
QGLGCSPIKAV ELGS+RRET+RSIS VGVRALRGPFPSTRGPGRTHLW
Sbjct: 457 QGLGCSPIKAVHELGSKRRETIRSISDVGVRALRGPFPSTRGPGRTHLW 416
BLAST of Lsi01G019070 vs. NCBI nr
Match:
QCE06699.1 (ribulose-bisphosphate carboxylase large chain [Vigna unguiculata])
HSP 1 Score: 395.2 bits (1014), Expect = 7.9e-106
Identity = 238/402 (59.20%), Postives = 248/402 (61.69%), Query Frame = 0
Query: 67 MNGAKRSAEAVGCKNASVGERSALEGSTCASSGGRSGSENVGLSNANIGENPMPRKPKGS 126
MNGAKRSA+AV C+N SVGE SAL G T SS GRSGSENV LSN N+GENPMPRKPKGS
Sbjct: 1 MNGAKRSAQAVECQNESVGESSALGGRTRTSSAGRSGSENVVLSNTNVGENPMPRKPKGS 60
Query: 127 SARFVHGGVRRGRENTSSQCSSTRRY-GAEVTHAILPGKARTTFNKRVPVPETDTDHVWG 186
SARFVH G+ + Q T Y EV HAIL GKARTTFNK VPVPETD
Sbjct: 61 SARFVH----EGKSSNDLQQMGTDVYKRQEVIHAILQGKARTTFNKWVPVPETD------ 120
Query: 187 LTPAQCRKVKEVGDLMTGEPATEAPVNGGRNYNGPKVAKFLVGSDPHERRNDLGTVSERG 246
TGEP TEAP+NGGR+YNGPKVAKFLV R G + R
Sbjct: 121 ----------------TGEPMTEAPMNGGRSYNGPKVAKFLV-------RIGFG-LFLRS 180
Query: 247 SVEGEEGPLPGGPEPSVRYHSGRARILTLCQDLRAKGQSQASQKVTEACKGFLGPDGDWP 306
G+ P GGPEPSVRYHSGRARILTLCQDLRA QSQ
Sbjct: 181 LSGGQRRPSSGGPEPSVRYHSGRARILTLCQDLRAGEQSQ-------------------- 240
Query: 307 SSAKAEGSLTARPTRRAGTKVGLSDPTVPSGRAVAQRIKSSHRREGLAPRCRLFATWGCS 366
SSHRREGLAPRCRLFATWGCS
Sbjct: 241 ---------------------------------------SSHRREGLAPRCRLFATWGCS 294
Query: 367 MFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTRGPGRTHLWCTSYRAHVS 426
MFQGLGCSPIKAVRELGSERRETV+SISGVGVRALRGPFPSTRGPGRTHLWC SYRAH
Sbjct: 301 MFQGLGCSPIKAVRELGSERRETVQSISGVGVRALRGPFPSTRGPGRTHLWCASYRAH-- 294
Query: 427 PPQDECSPIPTSPEPPVAQPRQRWVLCPCGDGATEVLRIQEK 468
EPPVAQPRQRWVLCP GD A EVLRIQEK
Sbjct: 361 -------------EPPVAQPRQRWVLCPSGDEAKEVLRIQEK 294
BLAST of Lsi01G019070 vs. NCBI nr
Match:
CAA7012817.1 (unnamed protein product [Microthlaspi erraticum])
HSP 1 Score: 395.2 bits (1014), Expect = 7.9e-106
Identity = 237/402 (58.96%), Postives = 241/402 (59.95%), Query Frame = 0
Query: 67 MNGAKRSAEAVGCKNASVGERSALEGSTCASSGGRSGSENVGLSNANIGENPMPRKPKGS 126
MNGAKRSAEAVGC+NASVGERSAL GS AS GGRSGSENVGLSNANIGENPMPRKPKGS
Sbjct: 1 MNGAKRSAEAVGCQNASVGERSALGGSNRASGGGRSGSENVGLSNANIGENPMPRKPKGS 60
Query: 127 SARFVHGGVRRGRENTSSQCSSTRRYGAEVTHAILPGKARTTFNKRVPVPETDTDHVWGL 186
SARFVHGGVRRGREN SQCSSTRRYGAEVTHAILPGKARTTFNKR
Sbjct: 61 SARFVHGGVRRGRENAPSQCSSTRRYGAEVTHAILPGKARTTFNKR-------------- 120
Query: 187 TPAQCRKVKEVGDLMTGEPATEAPVNGGRNYNGPKVAKFLVGSDPHERRNDLGTVSERGS 246
CRKVKEVGDLMTGEPATEAPVNGGRNYNGPK
Sbjct: 121 ----CRKVKEVGDLMTGEPATEAPVNGGRNYNGPK------------------------- 180
Query: 247 VEGEEGPLPGGPEPSVRYHSGRARILTLCQDLRAKGQSQASQKVTEACKGFLGPDGDWPS 306
ASQKVTEACKGFLGPDGDWPS
Sbjct: 181 ---------------------------------------ASQKVTEACKGFLGPDGDWPS 240
Query: 307 SAKAEGSLTARPTRRAGTKVGLSDPTVPSGRAVAQRI----------------------- 366
SAKAEGSLTARPTRRAGTKVGLSDPTVPSGRAVA +
Sbjct: 241 SAKAEGSLTARPTRRAGTKVGLSDPTVPSGRAVADKSYSRDNRGCKSSRWPDGDWPSSAK 300
Query: 367 ----------------------KSSHRREGLAPRCRLFATWGCSMFQGLGCSPIKAVREL 424
SSHRREGL +G P+K
Sbjct: 301 AEGSLTARPTRRAGTKVGLSDPTSSHRREGLHLDVGSSPPGAVVCSKGWAVRPLKRYVSC 320
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6N2NAY5 | 1.3e-199 | 78.38 | Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS480550 PE=4 SV=... | [more] |
A0A2N9GIA5 | 4.8e-141 | 62.87 | Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26796 PE=3... | [more] |
A0A2N9G3L9 | 1.1e-137 | 69.32 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS22064 PE=4 SV=1 | [more] |
A0A2N9HJU4 | 4.8e-133 | 77.71 | Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40354 PE=3... | [more] |
A0A2N9I678 | 4.8e-133 | 77.71 | Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS49399 PE=3... | [more] |
Match Name | E-value | Identity | Description | |
KAF1876778.1 | 3.8e-132 | 65.80 | hypothetical protein Lal_00043708 [Lupinus albus] | [more] |
TKS00107.1 | 1.7e-129 | 64.32 | hypothetical protein D5086_0000186410 [Populus alba] | [more] |
QCE14661.1 | 9.0e-118 | 62.35 | hypothetical protein DEO72_LG11g1664 [Vigna unguiculata] | [more] |
QCE06699.1 | 7.9e-106 | 59.20 | ribulose-bisphosphate carboxylase large chain [Vigna unguiculata] | [more] |
CAA7012817.1 | 7.9e-106 | 58.96 | unnamed protein product [Microthlaspi erraticum] | [more] |
Match Name | E-value | Identity | Description | |