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Lsi01G019030 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGCTGGAGTGAGCAATAATAACAAAAATGATGAGAAGGGGTTGCCGGCGGCGGAGAGTGAGATCATAAGAAAGTCAACGCCGCCACCGTTTCTGGTGAAGACTTATACGGCAGTGGAGGATCCAGCGACGGACGAGGTGATATCGTGGAATGGTGACGGGACGGCGTTTGTAGTTTGGCAGACGGCGGAATTCGCTAAAGATGTATTGCCAAAGCTGTTTAAGCATTGCAATTTCTCTAGCTTTGTTCGCCAACTTAATACCTATGTACGCTTTTCTTCTTCTTTACCTATTTTATTTAATTCATTACATTATTTATCTTAG ATGGAGGCTGGAGTGAGCAATAATAACAAAAATGATGAGAAGGGGTTGCCGGCGGCGGAGAGTGAGATCATAAGAAAGTCAACGCCGCCACCGTTTCTGGTGAAGACTTATACGGCAGTGGAGGATCCAGCGACGGACGAGGTGATATCGTGGAATGGTGACGGGACGGCGTTTGTAGTTTGGCAGACGGCGGAATTCGCTAAAGATGTATTGCCAAAGCTGTTTAAGCATTGCAATTTCTCTAGCTTTGTTCGCCAACTTAATACCTATGTACGCTTTTCTTCTTCTTTACCTATTTTATTTAATTCATTACATTATTTATCTTAG ATGGAGGCTGGAGTGAGCAATAATAACAAAAATGATGAGAAGGGGTTGCCGGCGGCGGAGAGTGAGATCATAAGAAAGTCAACGCCGCCACCGTTTCTGGTGAAGACTTATACGGCAGTGGAGGATCCAGCGACGGACGAGGTGATATCGTGGAATGGTGACGGGACGGCGTTTGTAGTTTGGCAGACGGCGGAATTCGCTAAAGATGTATTGCCAAAGCTGTTTAAGCATTGCAATTTCTCTAGCTTTGTTCGCCAACTTAATACCTATGTACGCTTTTCTTCTTCTTTACCTATTTTATTTAATTCATTACATTATTTATCTTAG MEAGVSNNNKNDEKGLPAAESEIIRKSTPPPFLVKTYTAVEDPATDEVISWNGDGTAFVVWQTAEFAKDVLPKLFKHCNFSSFVRQLNTYVRFSSSLPILFNSLHYLS Homology
BLAST of Lsi01G019030 vs. ExPASy Swiss-Prot
Match: O22230 (Heat stress transcription factor B-3 OS=Arabidopsis thaliana OX=3702 GN=HSFB3 PE=1 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 1.2e-25 Identity = 58/89 (65.17%), Postives = 63/89 (70.79%), Query Frame = 0
BLAST of Lsi01G019030 vs. ExPASy Swiss-Prot
Match: Q652B0 (Heat stress transcription factor B-2c OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB2C PE=2 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 3.4e-23 Identity = 51/73 (69.86%), Postives = 59/73 (80.82%), Query Frame = 0
BLAST of Lsi01G019030 vs. ExPASy Swiss-Prot
Match: Q7XRX3 (Heat stress transcription factor B-2a OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB2A PE=2 SV=2) HSP 1 Score: 107.1 bits (266), Expect = 1.3e-22 Identity = 48/61 (78.69%), Postives = 52/61 (85.25%), Query Frame = 0
BLAST of Lsi01G019030 vs. ExPASy Swiss-Prot
Match: Q6Z9C8 (Heat stress transcription factor B-2b OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB2B PE=2 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 2.2e-22 Identity = 50/79 (63.29%), Postives = 61/79 (77.22%), Query Frame = 0
BLAST of Lsi01G019030 vs. ExPASy Swiss-Prot
Match: Q9T0D3 (Heat stress transcription factor B-2b OS=Arabidopsis thaliana OX=3702 GN=HSFB2B PE=2 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 3.8e-22 Identity = 47/66 (71.21%), Postives = 54/66 (81.82%), Query Frame = 0
BLAST of Lsi01G019030 vs. ExPASy TrEMBL
Match: A0A6J1HY14 (heat stress transcription factor B-3 OS=Cucurbita maxima OX=3661 GN=LOC111467268 PE=3 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 2.0e-34 Identity = 77/95 (81.05%), Postives = 82/95 (86.32%), Query Frame = 0
BLAST of Lsi01G019030 vs. ExPASy TrEMBL
Match: A0A6J1DH46 (heat stress transcription factor B-3-like OS=Momordica charantia OX=3673 GN=LOC111020012 PE=3 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 5.8e-34 Identity = 74/90 (82.22%), Postives = 77/90 (85.56%), Query Frame = 0
BLAST of Lsi01G019030 vs. ExPASy TrEMBL
Match: A0A6J1ES59 (heat stress transcription factor B-3 OS=Cucurbita moschata OX=3662 GN=LOC111435477 PE=3 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 2.2e-33 Identity = 75/95 (78.95%), Postives = 81/95 (85.26%), Query Frame = 0
BLAST of Lsi01G019030 vs. ExPASy TrEMBL
Match: A0A0A0KYD7 (HSF_DOMAIN domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G171490 PE=3 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 1.9e-32 Identity = 82/107 (76.64%), Postives = 89/107 (83.18%), Query Frame = 0
BLAST of Lsi01G019030 vs. ExPASy TrEMBL
Match: A0A5D3CGR4 (Heat stress transcription factor B-3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00700 PE=3 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 6.6e-30 Identity = 74/98 (75.51%), Postives = 81/98 (82.65%), Query Frame = 0
BLAST of Lsi01G019030 vs. NCBI nr
Match: XP_038883399.1 (heat stress transcription factor B-3-like [Benincasa hispida]) HSP 1 Score: 169.5 bits (428), Expect = 1.6e-38 Identity = 83/92 (90.22%), Postives = 85/92 (92.39%), Query Frame = 0
BLAST of Lsi01G019030 vs. NCBI nr
Match: XP_022967894.1 (heat stress transcription factor B-3 [Cucurbita maxima]) HSP 1 Score: 154.8 bits (390), Expect = 4.1e-34 Identity = 77/95 (81.05%), Postives = 82/95 (86.32%), Query Frame = 0
BLAST of Lsi01G019030 vs. NCBI nr
Match: KAG7033512.1 (Heat stress transcription factor B-3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 153.7 bits (387), Expect = 9.2e-34 Identity = 76/95 (80.00%), Postives = 82/95 (86.32%), Query Frame = 0
BLAST of Lsi01G019030 vs. NCBI nr
Match: XP_022152241.1 (heat stress transcription factor B-3-like [Momordica charantia]) HSP 1 Score: 153.3 bits (386), Expect = 1.2e-33 Identity = 74/90 (82.22%), Postives = 77/90 (85.56%), Query Frame = 0
BLAST of Lsi01G019030 vs. NCBI nr
Match: XP_022928625.1 (heat stress transcription factor B-3 [Cucurbita moschata]) HSP 1 Score: 151.4 bits (381), Expect = 4.6e-33 Identity = 75/95 (78.95%), Postives = 81/95 (85.26%), Query Frame = 0
BLAST of Lsi01G019030 vs. TAIR 10
Match: AT2G41690.1 (heat shock transcription factor B3 ) HSP 1 Score: 117.1 bits (292), Expect = 8.9e-27 Identity = 58/89 (65.17%), Postives = 63/89 (70.79%), Query Frame = 0
BLAST of Lsi01G019030 vs. TAIR 10
Match: AT4G11660.1 (winged-helix DNA-binding transcription factor family protein ) HSP 1 Score: 105.5 bits (262), Expect = 2.7e-23 Identity = 47/66 (71.21%), Postives = 54/66 (81.82%), Query Frame = 0
BLAST of Lsi01G019030 vs. TAIR 10
Match: AT4G36990.1 (heat shock factor 4 ) HSP 1 Score: 105.1 bits (261), Expect = 3.5e-23 Identity = 46/66 (69.70%), Postives = 57/66 (86.36%), Query Frame = 0
BLAST of Lsi01G019030 vs. TAIR 10
Match: AT1G46264.1 (heat shock transcription factor B4 ) HSP 1 Score: 99.4 bits (246), Expect = 1.9e-21 Identity = 44/65 (67.69%), Postives = 50/65 (76.92%), Query Frame = 0
BLAST of Lsi01G019030 vs. TAIR 10
Match: AT5G62020.1 (heat shock transcription factor B2A ) HSP 1 Score: 98.2 bits (243), Expect = 4.3e-21 Identity = 43/66 (65.15%), Postives = 53/66 (80.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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