Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAGAGTGAAAAAATTCAAAAAAAATTGAGAGAAGCTCCCGCCACAAATTCGTTATTCACAATCAATGGCATATTTCCCTTCCACTCTCGAACGCACCGTTGCTTCTGCTCTGCTTCTCCTCTCCACTCCGCCGCCTACTCCGCCCTCTCCTCCGTTTACGTATGATATTCAATCCTATTCCCATTCCTCTTTCTTTCTCATTTCCTCTGTTCTGTTATATCATTCAAACTCATCGTCCTTTTTTTTTGTTTTGCTTTCGATCTCTGTTTCTGTGTTTTGTTGGCTGTGCAGACCGATTTCTCAAGACGAATGGCTGTTTGAGGAGAACATTATTGGAGGAAAATGCTCCAGAGAGATATCGGCGTTTTTTGATTATTCGAACTCTTGCTCTTCGATACTCACTGGATCAGATGAATCATCCGAGACTCGAGCGAAGGAACCGTTGTTGCTCTCTATTTCGCCTCATCGTGATGAGCTAAAGCTTAATGTAATGGTTCTCATTCTTATCTGTTTTACTTAATTTCTGTTCTTTTATTTTGTTCTTCTTGTATGTTGTTTGTTTTTTTTATTAGGTATTTTAGGCTCTGTTTTTGTTTGCGCATTTTCTGCTGTGTGTGATCGATACTGTGCCTTGGTTTGAGTAAAGGAACTATTCATTTGGTTCGGTGTTTAGGATTTTTTTTTTTTTTTTTTGAATTAGTTTCTGGATGACTTGAATTTAATCGTATTCTGTTCCTGAGACTGGTAGCCGAATTTAGTTTGTGTTCAATAATGCTTGGCTGATTATTTCCTTTTATTACCGATGTTTGGCTATCGGATCCTTCTTGTTGTCTTGTTTCTTCTTCGGTATCAACTTCAATCTGATCAGAATCTTGAAAACTCTACTTCCTCCTCCTGATTACTTATCCGTCTGTCACTGAATTTCAATTATATGGATTTCAAGTCTCAGTACTTCGATCGATGAAGCGTTTAGTTGCTAATTAGTAAATACTTTGTTGATTTTAAGTGTAAAACACTTTTAAGTCTAAGGAATTCCTCACAGGTCGTGAGAAAGAGTCGTTCGAAGATAATACGGATTTCCGAGAAGCAGAATTTCAGTTATACAGACGACGTTACCTTGTCTTCAGGCTCCGTGTCCTCGGAGACGACTTCTTGTTTATCAAGCAGCTCAAGCGTGGTCACAAGCGCGCCGATCCATCACGTAGTTACGAGAGCAAAGAAGAAGTTGGAAATGATTCGTCACGCGTGGAGGAAAGAGCAGGTGGCATCGGCTCATATGCGGCGGCGTGCGGAAGCCATTCTGAGTTACCTCTCCGGTGGTTGTTCCTCTGAAATGAAGATACGGCAAGTGATTGGTGACAGCCCTGACACAAGCAAGGCTCTCAGAATGTAATTAGTAATTCGTTCTTCCCTCTCACAACTCCTCACCACGTTGCCTCTAAAGTCATGCTTTTATCCAGTGCTTCCAATTCTCACATTTACTGTACACGGTAGGATCATCTATGTACTCTCATCTCTCATCATAATTTATATCCGAAAGGTTTAAAGATAGAAATTGGGAATGAATTTAATTCTTTCATATGTTGATCCATACTTTCAAGCTTATGTATGGATTAGGATCAGTTTTATGTTAATAAAATTGATTTGAGTTCTGTTTCGCCTTTTTTGGCAGGCTGTTGAAACTGGAAGAGATCAAAAGATCTGGAACAGGTGGGCGTCAAGATCCCTATAGATACAAGGTAACACTCAACTCCCTGCAGTTTCCTCTCTAA
mRNA sequence
AGAGAGTGAAAAAATTCAAAAAAAATTGAGAGAAGCTCCCGCCACAAATTCGTTATTCACAATCAATGGCATATTTCCCTTCCACTCTCGAACGCACCGTTGCTTCTGCTCTGCTTCTCCTCTCCACTCCGCCGCCTACTCCGCCCTCTCCTCCGTTTACACCGATTTCTCAAGACGAATGGCTGTTTGAGGAGAACATTATTGGAGGAAAATGCTCCAGAGAGATATCGGCGTTTTTTGATTATTCGAACTCTTGCTCTTCGATACTCACTGGATCAGATGAATCATCCGAGACTCGAGCGAAGGAACCGTTGTTGCTCTCTATTTCGCCTCATCGTGATGAGCTAAAGCTTAATGTCGTGAGAAAGAGTCGTTCGAAGATAATACGGATTTCCGAGAAGCAGAATTTCAGTTATACAGACGACGTTACCTTGTCTTCAGGCTCCGTGTCCTCGGAGACGACTTCTTGTTTATCAAGCAGCTCAAGCGTGGTCACAAGCGCGCCGATCCATCACGTAGTTACGAGAGCAAAGAAGAAGTTGGAAATGATTCGTCACGCGTGGAGGAAAGAGCAGGTGGCATCGGCTCATATGCGGCGGCGTGCGGAAGCCATTCTGAGTTACCTCTCCGGTGGTTGTTCCTCTGAAATGAAGATACGGCAAGTGATTGGTGACAGCCCTGACACAAGCAAGGCTCTCAGAATGCTGTTGAAACTGGAAGAGATCAAAAGATCTGGAACAGGTGGGCGTCAAGATCCCTATAGATACAAGGTAACACTCAACTCCCTGCAGTTTCCTCTCTAA
Coding sequence (CDS)
ATGGCATATTTCCCTTCCACTCTCGAACGCACCGTTGCTTCTGCTCTGCTTCTCCTCTCCACTCCGCCGCCTACTCCGCCCTCTCCTCCGTTTACACCGATTTCTCAAGACGAATGGCTGTTTGAGGAGAACATTATTGGAGGAAAATGCTCCAGAGAGATATCGGCGTTTTTTGATTATTCGAACTCTTGCTCTTCGATACTCACTGGATCAGATGAATCATCCGAGACTCGAGCGAAGGAACCGTTGTTGCTCTCTATTTCGCCTCATCGTGATGAGCTAAAGCTTAATGTCGTGAGAAAGAGTCGTTCGAAGATAATACGGATTTCCGAGAAGCAGAATTTCAGTTATACAGACGACGTTACCTTGTCTTCAGGCTCCGTGTCCTCGGAGACGACTTCTTGTTTATCAAGCAGCTCAAGCGTGGTCACAAGCGCGCCGATCCATCACGTAGTTACGAGAGCAAAGAAGAAGTTGGAAATGATTCGTCACGCGTGGAGGAAAGAGCAGGTGGCATCGGCTCATATGCGGCGGCGTGCGGAAGCCATTCTGAGTTACCTCTCCGGTGGTTGTTCCTCTGAAATGAAGATACGGCAAGTGATTGGTGACAGCCCTGACACAAGCAAGGCTCTCAGAATGCTGTTGAAACTGGAAGAGATCAAAAGATCTGGAACAGGTGGGCGTCAAGATCCCTATAGATACAAGGTAACACTCAACTCCCTGCAGTTTCCTCTCTAA
Protein sequence
MAYFPSTLERTVASALLLLSTPPPTPPSPPFTPISQDEWLFEENIIGGKCSREISAFFDYSNSCSSILTGSDESSETRAKEPLLLSISPHRDELKLNVVRKSRSKIIRISEKQNFSYTDDVTLSSGSVSSETTSCLSSSSSVVTSAPIHHVVTRAKKKLEMIRHAWRKEQVASAHMRRRAEAILSYLSGGCSSEMKIRQVIGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYRYKVTLNSLQFPL
Homology
BLAST of Lsi01G018630 vs. ExPASy TrEMBL
Match:
A0A6J1EL58 (uncharacterized protein LOC111435559 OS=Cucurbita moschata OX=3662 GN=LOC111435559 PE=4 SV=1)
HSP 1 Score: 344.4 bits (882), Expect = 4.0e-91
Identity = 190/239 (79.50%), Postives = 205/239 (85.77%), Query Frame = 0
Query: 1 MAYFPSTLERTVASALLLLSTPPPTPPSP---PFTPISQDEWLFEENIIGGKCSREISAF 60
MA FP LERTVASALLLLST PP PPSP P PISQDEWLFEE I+GGKCS E+S F
Sbjct: 1 MAEFPCALERTVASALLLLSTSPPPPPSPQPSPSIPISQDEWLFEEKILGGKCSSEMSPF 60
Query: 61 FDYSNSCSSILTGSDESSETRAKEPLLLSISPHRDELKLNVVRKSRSKIIRISEKQNFSY 120
D S SCSS+LT SDESSETRA+E LL S S +RDELKLNVVRKSRS+ +RIS +N +
Sbjct: 61 CDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLNVVRKSRSRPVRISGNRNLTP 120
Query: 121 TDDVTLSSGSVSSETTSCLSSSSSVVTSAPIHHVVTRAKKKLEMIRHAWRKEQVASAHMR 180
TDDVTLSSGS SSETT CLSSSSSV TSAPI +VTRA+KKLEMIRHAWRK+ VASAHMR
Sbjct: 121 TDDVTLSSGSASSETTYCLSSSSSVDTSAPIRRLVTRAEKKLEMIRHAWRKKHVASAHMR 180
Query: 181 RRAEAILSYLSGGCSSEMKIRQVIGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYRYKV 237
RRAEAILSYLSGGCSSE+KIRQV+GDSPDTSKALRMLLKLEEIKRSGTGGRQDPY Y +
Sbjct: 181 RRAEAILSYLSGGCSSEVKIRQVLGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYIYTI 239
BLAST of Lsi01G018630 vs. ExPASy TrEMBL
Match:
A0A6J1HWL4 (uncharacterized protein LOC111467304 OS=Cucurbita maxima OX=3661 GN=LOC111467304 PE=4 SV=1)
HSP 1 Score: 341.3 bits (874), Expect = 3.4e-90
Identity = 189/239 (79.08%), Postives = 204/239 (85.36%), Query Frame = 0
Query: 1 MAYFPSTLERTVASALLLLSTPPPTPPSP---PFTPISQDEWLFEENIIGGKCSREISAF 60
MA FP LERTVASALLLLST PP P SP P PISQDEWLFEE I+GGKCS E+S F
Sbjct: 1 MAEFPCALERTVASALLLLSTSPPPPSSPPPSPSIPISQDEWLFEEKILGGKCSSEMSPF 60
Query: 61 FDYSNSCSSILTGSDESSETRAKEPLLLSISPHRDELKLNVVRKSRSKIIRISEKQNFSY 120
D S SCSS+LT SDESSETRA+E LL S S +RDELKLNVVRKSRS+ +RIS +N +
Sbjct: 61 CDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLNVVRKSRSRPVRISGNRNLTP 120
Query: 121 TDDVTLSSGSVSSETTSCLSSSSSVVTSAPIHHVVTRAKKKLEMIRHAWRKEQVASAHMR 180
TDDVTLSSGS SSETT CLSSSSSV TSAPI +VTRA+KKLEMIRHAWRK+ VASAHMR
Sbjct: 121 TDDVTLSSGSASSETTYCLSSSSSVDTSAPIRRLVTRAEKKLEMIRHAWRKKHVASAHMR 180
Query: 181 RRAEAILSYLSGGCSSEMKIRQVIGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYRYKV 237
RRAEAILSYLSGGCSSE+KIRQV+GDSPDTSKALRMLLKLEEIKRSGTGGRQDPY Y +
Sbjct: 181 RRAEAILSYLSGGCSSEVKIRQVLGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYIYTI 239
BLAST of Lsi01G018630 vs. ExPASy TrEMBL
Match:
A0A6J1EE02 (uncharacterized protein LOC111432371 OS=Cucurbita moschata OX=3662 GN=LOC111432371 PE=4 SV=1)
HSP 1 Score: 339.0 bits (868), Expect = 1.7e-89
Identity = 184/236 (77.97%), Postives = 206/236 (87.29%), Query Frame = 0
Query: 1 MAYFPSTLERTVASALLLLSTPPPTPPSPPFTPISQDEWLFEENIIGGKCSREISAFFDY 60
MA FP +LERTVASALLLLST PP PPSPP + + QDEWL EE+ IGG REI+ +DY
Sbjct: 1 MAEFPCSLERTVASALLLLSTSPPPPPSPPVS-VCQDEWLSEEDTIGGSFLREITVLYDY 60
Query: 61 SNSCSSILTGSDESSETRAKEPLLLSISPHRDELKLNVVRKSRSKIIRISEKQNFSYTDD 120
S SCSS+LT SDESSETRA+EPLL S +RD+LKL+VVRKSRSK+IRISE +N + TDD
Sbjct: 61 SKSCSSVLTRSDESSETRAEEPLLFSTQAYRDDLKLHVVRKSRSKLIRISENRNLTSTDD 120
Query: 121 VTLSSGSVSSETTSCLSSSSSVVTSAPIHHVVTRAKKKLEMIRHAWRKEQVASAHMRRRA 180
VTLSSGSVSSE +SCLSSSSSVVTSAPIH +VTRA+KKLEMIRH WRK VA+AHMRRRA
Sbjct: 121 VTLSSGSVSSE-SSCLSSSSSVVTSAPIHRLVTRAEKKLEMIRHVWRKRHVATAHMRRRA 180
Query: 181 EAILSYLSGGCSSEMKIRQVIGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYRYKV 237
EAILSYLSGGCSSE+KIRQV+GDSPDTSKALR+LLKLEEIKRSGTGGRQDPY Y +
Sbjct: 181 EAILSYLSGGCSSEVKIRQVLGDSPDTSKALRILLKLEEIKRSGTGGRQDPYIYTI 234
BLAST of Lsi01G018630 vs. ExPASy TrEMBL
Match:
A0A0A0L130 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G165910 PE=4 SV=1)
HSP 1 Score: 336.3 bits (861), Expect = 1.1e-88
Identity = 186/236 (78.81%), Postives = 203/236 (86.02%), Query Frame = 0
Query: 1 MAYFPSTLERTVASALLLLSTPPPTPPSPPFTPISQDEWLFEENIIGGKCSREISAFFDY 60
MA FPS LERTVASALLLLS PSPP TPIS+DEWLFEE I GKCSRE+SAF ++
Sbjct: 1 MAEFPSPLERTVASALLLLS----ISPSPPSTPISEDEWLFEEKNIEGKCSREMSAFCEH 60
Query: 61 SNSCSSILTGSDESSETRAKEPLLLSISPHRDELKLNVVRKSRSKIIRISEKQNFSYTDD 120
SNS SSILT SD SS T E LL S SP R +LKLNVVRKSRSK++RISE +N S TD+
Sbjct: 61 SNSSSSILTTSDASSHTPPLERLLFSTSPCRHQLKLNVVRKSRSKLVRISENRNLSSTDE 120
Query: 121 VTLSSGSVSSETTSCLSSSSSVVTSAPIHHVVTRAKKKLEMIRHAWRKEQVASAHMRRRA 180
VTLSSGS SSETTSCLSSSSSVVTS PIH +VTRA+KKLEMIRHAWRK+Q+ASAHMRRRA
Sbjct: 121 VTLSSGSASSETTSCLSSSSSVVTSTPIHRLVTRAEKKLEMIRHAWRKKQIASAHMRRRA 180
Query: 181 EAILSYLSGGCSSEMKIRQVIGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYRYKV 237
EAILSYLS GCSSE+KIR+VIGDSPDTSKALR+LLKLEEIKRSGTGGRQDPY YK+
Sbjct: 181 EAILSYLSDGCSSEVKIRKVIGDSPDTSKALRILLKLEEIKRSGTGGRQDPYMYKI 232
BLAST of Lsi01G018630 vs. ExPASy TrEMBL
Match:
A0A1S4E302 (uncharacterized protein LOC103499533 OS=Cucumis melo OX=3656 GN=LOC103499533 PE=4 SV=1)
HSP 1 Score: 334.7 bits (857), Expect = 3.2e-88
Identity = 189/239 (79.08%), Postives = 203/239 (84.94%), Query Frame = 0
Query: 1 MAYFPSTLERTVASALLLLSTPPPTPPSPPFTPISQDEWLFEENIIGGKCSREISAFFDY 60
MA FPS LERTVASALLLLS PSPP TPIS+DEWLFE+N I GKCSREISAF DY
Sbjct: 1 MAEFPSPLERTVASALLLLS----ISPSPPSTPISEDEWLFEKN-IEGKCSREISAFCDY 60
Query: 61 SNSCSSILTGSDESSETRAKEPLLLSISPHRDELKLNVVRKSRSKIIRISEKQNFSYTDD 120
SN+ SSILT SD SS T E LL P R +L LNVVRKSRSK++RISE +N S TD+
Sbjct: 61 SNTSSSILTTSDASSHTPPLERLLFLTYPCRHQLMLNVVRKSRSKLVRISENRNLSSTDE 120
Query: 121 VTLSSGSVSSETTSCLSSSSSVVTSAPIHHVVTRAKKKLEMIRHAWRKEQVASAHMRRRA 180
VTLSSGS SSETTSCLSSSSSVVTSAPIH +VTRA+KKLEMIRHAWRK+Q+ASAHMRRRA
Sbjct: 121 VTLSSGSASSETTSCLSSSSSVVTSAPIHRLVTRAEKKLEMIRHAWRKKQIASAHMRRRA 180
Query: 181 EAILSYLSGGCSSEMKIRQVIGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYRYKVTLN 240
EAILSYLS GCSSE+KIRQVIGDSPDTSKALR+LLKLEEIKRSGTGGRQDPY YKV N
Sbjct: 181 EAILSYLSDGCSSEVKIRQVIGDSPDTSKALRILLKLEEIKRSGTGGRQDPYMYKVQHN 234
BLAST of Lsi01G018630 vs. NCBI nr
Match:
XP_038882356.1 (uncharacterized protein LOC120073620 [Benincasa hispida])
HSP 1 Score: 364.8 bits (935), Expect = 5.9e-97
Identity = 202/240 (84.17%), Postives = 210/240 (87.50%), Query Frame = 0
Query: 1 MAYFPSTLERTVASALLLLST----PPPTPPSPPFTPISQDEWLFEENIIGGKCSREISA 60
MA FPS LERTVASALLLLST PPP PPSPP TP SQD+WLFE N+IGGKCS EIS
Sbjct: 1 MAQFPSPLERTVASALLLLSTPPPLPPPPPPSPPPTPNSQDKWLFENNVIGGKCSTEISP 60
Query: 61 FFDYSNSCSSILTGSDESSETRAKEPLLLSISPHRDELKLNVVRKSRSKIIRISEKQNFS 120
F DYSNS SSILT S+ESSETRAKEPLL S P DELKL VVRKSRSKIIRISEK N S
Sbjct: 61 FCDYSNSSSSILTVSNESSETRAKEPLLFSTPPCLDELKLTVVRKSRSKIIRISEKWNLS 120
Query: 121 YTDDVTLSSGSVSSETTSCLSSSSSVVTSAPIHHVVTRAKKKLEMIRHAWRKEQVASAHM 180
TDDVTLSS S SSETTSCLSSSSSVVT APIH +V RA+KKLEMIRHAWRK+QVASAHM
Sbjct: 121 STDDVTLSSDSASSETTSCLSSSSSVVTRAPIHRLVARAEKKLEMIRHAWRKKQVASAHM 180
Query: 181 RRRAEAILSYLSGGCSSEMKIRQVIGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYRYKV 237
RRRAEAILSYLSGGCSSE+KIRQVIGDSPDTSKALRMLLKLEEIKRSGTGGRQDPY YK+
Sbjct: 181 RRRAEAILSYLSGGCSSEVKIRQVIGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYMYKI 240
BLAST of Lsi01G018630 vs. NCBI nr
Match:
XP_023544086.1 (uncharacterized protein LOC111803781 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 344.4 bits (882), Expect = 8.3e-91
Identity = 190/239 (79.50%), Postives = 205/239 (85.77%), Query Frame = 0
Query: 1 MAYFPSTLERTVASALLLLSTPPPTPPSP---PFTPISQDEWLFEENIIGGKCSREISAF 60
MA FP LERTVASALLLLST PP PPSP P PISQDEWLFEE I+GGKCS E+S F
Sbjct: 1 MAEFPCALERTVASALLLLSTSPPPPPSPPPSPSLPISQDEWLFEEKILGGKCSSEMSPF 60
Query: 61 FDYSNSCSSILTGSDESSETRAKEPLLLSISPHRDELKLNVVRKSRSKIIRISEKQNFSY 120
D S SCSS+LT SDESSETRA+E LL S S +RDELKLNVVRKSRS+ +RIS +N +
Sbjct: 61 CDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLNVVRKSRSRPVRISGNRNLTP 120
Query: 121 TDDVTLSSGSVSSETTSCLSSSSSVVTSAPIHHVVTRAKKKLEMIRHAWRKEQVASAHMR 180
TDDVTLSSGS SSETT CLSSSSSV TSAPI +VTRA+KKLEMIRHAWRK+ VASAHMR
Sbjct: 121 TDDVTLSSGSASSETTYCLSSSSSVDTSAPIRRLVTRAEKKLEMIRHAWRKKHVASAHMR 180
Query: 181 RRAEAILSYLSGGCSSEMKIRQVIGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYRYKV 237
RRAEAILSYLSGGCSSE+KIRQV+GDSPDTSKALRMLLKLEEIKRSGTGGRQDPY Y +
Sbjct: 181 RRAEAILSYLSGGCSSEVKIRQVLGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYIYTI 239
BLAST of Lsi01G018630 vs. NCBI nr
Match:
XP_022928741.1 (uncharacterized protein LOC111435559 [Cucurbita moschata])
HSP 1 Score: 344.4 bits (882), Expect = 8.3e-91
Identity = 190/239 (79.50%), Postives = 205/239 (85.77%), Query Frame = 0
Query: 1 MAYFPSTLERTVASALLLLSTPPPTPPSP---PFTPISQDEWLFEENIIGGKCSREISAF 60
MA FP LERTVASALLLLST PP PPSP P PISQDEWLFEE I+GGKCS E+S F
Sbjct: 1 MAEFPCALERTVASALLLLSTSPPPPPSPQPSPSIPISQDEWLFEEKILGGKCSSEMSPF 60
Query: 61 FDYSNSCSSILTGSDESSETRAKEPLLLSISPHRDELKLNVVRKSRSKIIRISEKQNFSY 120
D S SCSS+LT SDESSETRA+E LL S S +RDELKLNVVRKSRS+ +RIS +N +
Sbjct: 61 CDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLNVVRKSRSRPVRISGNRNLTP 120
Query: 121 TDDVTLSSGSVSSETTSCLSSSSSVVTSAPIHHVVTRAKKKLEMIRHAWRKEQVASAHMR 180
TDDVTLSSGS SSETT CLSSSSSV TSAPI +VTRA+KKLEMIRHAWRK+ VASAHMR
Sbjct: 121 TDDVTLSSGSASSETTYCLSSSSSVDTSAPIRRLVTRAEKKLEMIRHAWRKKHVASAHMR 180
Query: 181 RRAEAILSYLSGGCSSEMKIRQVIGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYRYKV 237
RRAEAILSYLSGGCSSE+KIRQV+GDSPDTSKALRMLLKLEEIKRSGTGGRQDPY Y +
Sbjct: 181 RRAEAILSYLSGGCSSEVKIRQVLGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYIYTI 239
BLAST of Lsi01G018630 vs. NCBI nr
Match:
KAG7027627.1 (hypothetical protein SDJN02_11642, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 343.6 bits (880), Expect = 1.4e-90
Identity = 192/247 (77.73%), Postives = 213/247 (86.23%), Query Frame = 0
Query: 1 MAYFPSTLERTVASALLLLSTPPPTPPSPPFTPISQDEWLFEENIIGGKCSREISAFFDY 60
MA FP +LERTVASALLLLST PP PPSPP + + QDEWL EE+ IGG REI+ +DY
Sbjct: 1 MAEFPCSLERTVASALLLLSTSPPPPPSPPVS-VCQDEWLSEEDTIGGSFLREITVLYDY 60
Query: 61 SNSCSSILTGSDESSETRAKEPLLLSISPHRDELKLNVVRKSRSKIIRISEKQNFSYTDD 120
S SCSS+LT SDESSETRA+EPLL S +RD+LKL+VVRKSRSK+IRISE +N + TDD
Sbjct: 61 SKSCSSVLTRSDESSETRAEEPLLFSTPAYRDDLKLHVVRKSRSKLIRISENRNLTSTDD 120
Query: 121 VTLSSGSVSSETTSCLSSSSSVVTSAPIHHVVTRAKKKLEMIRHAWRKEQVASAHMRRRA 180
VTLSSGSVSSE +SCLSSSSSVVTSAPIH +VTRA+KKLEMIRH WRK VA+AHMRRRA
Sbjct: 121 VTLSSGSVSSE-SSCLSSSSSVVTSAPIHRLVTRAEKKLEMIRHVWRKRHVATAHMRRRA 180
Query: 181 EAILSYLSGGCSSEMKIRQVIGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYRYKV--TL 240
EAILSYLSGGCSSE+KIRQV+GDSPDTSKALR+LLKLEEIKRSGTGGRQDPY Y V TL
Sbjct: 181 EAILSYLSGGCSSEVKIRQVLGDSPDTSKALRILLKLEEIKRSGTGGRQDPYIYTVLDTL 240
Query: 241 NSLQFPL 246
NS Q PL
Sbjct: 241 NS-QLPL 244
BLAST of Lsi01G018630 vs. NCBI nr
Match:
KAG7033525.1 (hypothetical protein SDJN02_03247, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 343.2 bits (879), Expect = 1.9e-90
Identity = 189/239 (79.08%), Postives = 205/239 (85.77%), Query Frame = 0
Query: 1 MAYFPSTLERTVASALLLLST---PPPTPPSPPFTPISQDEWLFEENIIGGKCSREISAF 60
MA FP LERTVASALLLLST PPP+PP P PISQDEWLFEE I+GGKCS E+S F
Sbjct: 1 MAEFPCALERTVASALLLLSTSLPPPPSPPPSPSIPISQDEWLFEEKILGGKCSSEMSPF 60
Query: 61 FDYSNSCSSILTGSDESSETRAKEPLLLSISPHRDELKLNVVRKSRSKIIRISEKQNFSY 120
D S SCSS+LT SDESSETRA+E LL S S +RDELKLNVVRKSRS+ +RIS +N +
Sbjct: 61 CDDSKSCSSVLTRSDESSETRAQELLLFSTSAYRDELKLNVVRKSRSRPVRISGNRNLTP 120
Query: 121 TDDVTLSSGSVSSETTSCLSSSSSVVTSAPIHHVVTRAKKKLEMIRHAWRKEQVASAHMR 180
TDDVTLSSGS SSETT CLSSSSSV TSAPI +VTRA+KKLEMIRHAWRK+ VASAHMR
Sbjct: 121 TDDVTLSSGSASSETTYCLSSSSSVDTSAPIRRLVTRAEKKLEMIRHAWRKKHVASAHMR 180
Query: 181 RRAEAILSYLSGGCSSEMKIRQVIGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYRYKV 237
RRAEAILSYLSGGCSSE+KIRQV+GDSPDTSKALRMLLKLEEIKRSGTGGRQDPY Y +
Sbjct: 181 RRAEAILSYLSGGCSSEVKIRQVLGDSPDTSKALRMLLKLEEIKRSGTGGRQDPYIYTI 239
BLAST of Lsi01G018630 vs. TAIR 10
Match:
AT3G57440.1 (unknown protein; Has 31 Blast hits to 31 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 117.5 bits (293), Expect = 1.5e-26
Identity = 101/250 (40.40%), Postives = 135/250 (54.00%), Query Frame = 0
Query: 1 MAYFPSTLERTVASALLLLSTPPPTPPSPPFTPISQDEWLFEENIIGGKC---SREISAF 60
MA +PS +ERTVAS+LLLLS P F + E + E + + C S +S
Sbjct: 1 MATYPSVIERTVASSLLLLSY------GPVFFSPKRSESVEESSYVRKWCHEGSSNLSLM 60
Query: 61 F--DYSNSCSSILTGSDESSETRAKEPLLLSISPHRDELKLNVVRKSRSKIIRISEKQNF 120
S SC S L+ + +E + + RK RS++I S NF
Sbjct: 61 LGSSGSRSCGSALSSDGSFGMSEDREFKINYTGDPFRLMNFKTARKRRSQVIWGS--FNF 120
Query: 121 SYTD-------DVTLSSGSVSSETTSCLSSSSSVVTSAPIHHVVTRAKKKLEMIRHAWR- 180
T DV LS+ SV S+ SCLS+ SS V+S + R +K E +R +
Sbjct: 121 KPTHLKMNPVCDV-LSTCSVDSKDESCLSTGSSEVSSVE-SRIKVRNQKSNEKLRGGGKT 180
Query: 181 -KEQVASAHMRRRAEAILSYLSGGCSSEMKIRQVIGDSPDTSKALRMLLKLEEIKRSGTG 237
KE S+ +RRRA+ IL +LS SSE+ IRQ++GDSPDTSKALRMLLK+EE+KR GTG
Sbjct: 181 MKESSRSSSIRRRAKDILEFLSSESSSEVHIRQILGDSPDTSKALRMLLKMEEVKRFGTG 240
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1EL58 | 4.0e-91 | 79.50 | uncharacterized protein LOC111435559 OS=Cucurbita moschata OX=3662 GN=LOC1114355... | [more] |
A0A6J1HWL4 | 3.4e-90 | 79.08 | uncharacterized protein LOC111467304 OS=Cucurbita maxima OX=3661 GN=LOC111467304... | [more] |
A0A6J1EE02 | 1.7e-89 | 77.97 | uncharacterized protein LOC111432371 OS=Cucurbita moschata OX=3662 GN=LOC1114323... | [more] |
A0A0A0L130 | 1.1e-88 | 78.81 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G165910 PE=4 SV=1 | [more] |
A0A1S4E302 | 3.2e-88 | 79.08 | uncharacterized protein LOC103499533 OS=Cucumis melo OX=3656 GN=LOC103499533 PE=... | [more] |
Match Name | E-value | Identity | Description | |
XP_038882356.1 | 5.9e-97 | 84.17 | uncharacterized protein LOC120073620 [Benincasa hispida] | [more] |
XP_023544086.1 | 8.3e-91 | 79.50 | uncharacterized protein LOC111803781 [Cucurbita pepo subsp. pepo] | [more] |
XP_022928741.1 | 8.3e-91 | 79.50 | uncharacterized protein LOC111435559 [Cucurbita moschata] | [more] |
KAG7027627.1 | 1.4e-90 | 77.73 | hypothetical protein SDJN02_11642, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KAG7033525.1 | 1.9e-90 | 79.08 | hypothetical protein SDJN02_03247, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |
AT3G57440.1 | 1.5e-26 | 40.40 | unknown protein; Has 31 Blast hits to 31 proteins in 11 species: Archae - 0; Bac... | [more] |