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Lsi01G018610 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGAAGAGTAAAAGGAGGAATCAAAGGCAGAGGAAAAAACGAAAGTTGAAGGATGGAAGGGGCAATTTTATTATGGATTGGGCAGGGCTCCCGCATGATATTCTTGTCATGATCTTTAAGCAACTGTCTCTTGTGGATTGTATGTCGATTGATAGTGTTTGTAAGTTGTGCAGCAATATCCTTGCTTAACTTCCAAATTTGAAGCAGGGTGGATTTCCATGGCTTTTGATGTCAGGTAAAAAAGATAGAGAGATGAGAACTTGTGCTAGCATTCTAGACAATCGAATGTGGGAAATGGAGCTTCTTGAGGCATATGGAGCTTATGTATGGGGATCTTTTCAGGACTGACGAATAATAGTGAAGGATCTTGGTTGCTATTCTCTTGAAGTTAGTTTGTTGAATCCATTCTCTACAAGGAAGATTAACCTGCCAAGGCTTTGGAACTTCTACCAAATGGACCTTGATACTACATAGCTAACTACATTTGTATTAAGGTTGTGAGAGATTTAACCCACTATATCCCTTTGGCCTTATTACATGCCTTCTTTGACCTTTTAATCTATAATAGTCATGTTAAGGGAGAAGAAGAAGTATCAGGAATAAAACGTCACAAGAGACGAGATCTAAAATAGGATATAGTTCAGGGAGAAGAAGAAGTATCGAGACTAAAACGTTAGGAGAGCCAAGATCTAAAATAGGATATAGTTCAAGAAGAAGAAGTATAAGGACTAAAACATTACGAGAGCCAAGATCTAAAATAGGATATAATTCAGGGAGAAGAAGAAACATAGGGACTTAAATGTCACGAAAGCCGAGATCTAAAATAGGATATAGTTTACGAAGAAGAAGAAGTATAGGGACTAAAACGTTACGAAAGTCGGATCTAAAATAGGATATAGTTTAGGGAGAAGAAGAAGTAGATGTAGATATAGATAATCTTTAACTGCTCCCTTTGAAAATCATGTGCAAATTGACGGTAGAATTACACATACTTTGCTGTAAGTTTTAAGGAAAAAAAAGTCATAGAAAAAAGTTCTAAAAATCATTAAAATAATTATATTGGTAAAATCACAGTGGAATATATGTTTTTTCCACCATTACTGGAACCTGCTGAGAATATAAACAAGAAACAATCAAAACAACCTTTACTTAAGAGATGAAGAAGAGAGGATAGTTTAGTGGACGTTTTGAAATTCTTTATATATGTGTGTGTTTATTTCTTTTTCTTTTTCTTTTCTTTTAGGGATTGTTCCAACTGTTATTTTTATATATTATATTTGATGAGATTGTAAAACAATATCCCTGGATTTGTACCTTTTTCTTTCATAACATGAAAAGTTTGCTGC ATGTTGAAGAGTAAAAGGAGGAATCAAAGGCAGAGGAAAAAACGAAAGTTGAAGGATGGAAGGGGCAATTTTATTATGGATTGGGCAGGGCTCCCGCATGATATTCTTGTCATGATCTTTAAGCAACTGTCTCTTGTGGATTGTATGTCGATTGATAGTGTTTGTAAAAAAGATAGAGAGATGAGAACTTGTGCTAGCATTCTAGACAATCGAATGTGGGAAATGGAGCTTCTTGAGGCATATGGAGCTTATGTATGGGGATCTTTTCAGGACTGACGAATAATAGTGAAGGATCTTGGTTGCTATTCTCTTGAAGTTAGTTTGTTGAATCCATTCTCTACAAGGAAGATTAACCTGCCAAGGCTTTGGAACTTCTACCAAATGGACCTTGATACTACATAGCTAACTACATTTGTATTAAGGTTGTGAGAGATTTAACCCACTATATCCCTTTGGCCTTATTACATGCCTTCTTTGACCTTTTAATCTATAATAGTCATGTTAAGGGAGAAGAAGAAGTATCAGGAATAAAACGTCACAAGAGACGAGATCTAAAATAGGATATAGTTCAGGGAGAAGAAGAAGTATCGAGACTAAAACGTTAGGAGAGCCAAGATCTAAAATAGGATATAGTTCAAGAAGAAGAAGTATAAGGACTAAAACATTACGAGAGCCAAGATCTAAAATAGGATATAATTCAGGGAGAAGAAGAAACATAGGGACTTAAATGTCACGAAAGCCGAGATCTAAAATAGGATATAGTTTACGAAGAAGAAGAAGTATAGGGACTAAAACGTTACGAAAGTCGGATCTAAAATAGGATATAGTTTAGGGAGAAGAAGAAGTAGATGTAGATATAGATAATCTTTAACTGCTCCCTTTGAAAATCATGTGCAAATTGACGGTAGAATTACACATACTTTGCTGTAAGTTTTAAGGAAAAAAAAGTCATAGAAAAAAGTTCTAAAAATCATTAAAATAATTATATTGGTAAAATCACAGTGGAATATATGTTTTTTCCACCATTACTGGAACCTGCTGAGAATATAAACAAGAAACAATCAAAACAACCTTTACTTAAGAGATGAAGAAGAGAGGATAGTTTAGTGGACGTTTTGAAATTCTTTATATATGTGTGTGTTTATTTCTTTTTCTTTTTCTTTTCTTTTAGGGATTGTTCCAACTGTTATTTTTATATATTATATTTGATGAGATTGTAAAACAATATCCCTGGATTTGTACCTTTTTCTTTCATAACATGAAAAGTTTGCTGC ATGTTGAAGAGTAAAAGGAGGAATCAAAGGCAGAGGAAAAAACGAAAGTTGAAGGATGGAAGGGGCAATTTTATTATGGATTGGGCAGGGCTCCCGCATGATATTCTTGTCATGATCTTTAAGCAACTGTCTCTTGTGGATTGTATGTCGATTGATAGTGTTTGTAAAAAAGATAGAGAGATGAGAACTTGTGCTAGCATTCTAGACAATCGAATGTGGGAAATGGAGCTTCTTGAGGCATATGGAGCTTATGTATGGGGATCTTTTCAGGACTGA MLKSKRRNQRQRKKRKLKDGRGNFIMDWAGLPHDILVMIFKQLSLVDCMSIDSVCKKDREMRTCASILDNRMWEMELLEAYGAYVWGSFQD Homology
BLAST of Lsi01G018610 vs. ExPASy TrEMBL
Match: A0A6J1H0R2 (F-box protein At1g49360-like OS=Cucurbita moschata OX=3662 GN=LOC111458880 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.3e-34 Identity = 80/116 (68.97%), Postives = 87/116 (75.00%), Query Frame = 0
BLAST of Lsi01G018610 vs. ExPASy TrEMBL
Match: A0A6J1IRF4 (F-box protein At3g56470-like OS=Cucurbita maxima OX=3661 GN=LOC111479302 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 3.7e-34 Identity = 80/116 (68.97%), Postives = 86/116 (74.14%), Query Frame = 0
BLAST of Lsi01G018610 vs. ExPASy TrEMBL
Match: A0A1S4DWA3 (uncharacterized protein LOC103489302 OS=Cucumis melo OX=3656 GN=LOC103489302 PE=4 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 6.6e-31 Identity = 74/116 (63.79%), Postives = 84/116 (72.41%), Query Frame = 0
BLAST of Lsi01G018610 vs. ExPASy TrEMBL
Match: A0A5D3CCV3 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001230 PE=4 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 6.6e-31 Identity = 74/116 (63.79%), Postives = 84/116 (72.41%), Query Frame = 0
BLAST of Lsi01G018610 vs. ExPASy TrEMBL
Match: A0A0A0KT87 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G610380 PE=4 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 6.6e-31 Identity = 73/116 (62.93%), Postives = 85/116 (73.28%), Query Frame = 0
BLAST of Lsi01G018610 vs. NCBI nr
Match: KAG6601277.1 (F-box/kelch-repeat protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 155.2 bits (391), Expect = 2.7e-34 Identity = 80/116 (68.97%), Postives = 87/116 (75.00%), Query Frame = 0
BLAST of Lsi01G018610 vs. NCBI nr
Match: XP_022957505.1 (F-box protein At1g49360-like [Cucurbita moschata] >KAG7032065.1 F-box/kelch-repeat protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 155.2 bits (391), Expect = 2.7e-34 Identity = 80/116 (68.97%), Postives = 87/116 (75.00%), Query Frame = 0
BLAST of Lsi01G018610 vs. NCBI nr
Match: XP_023516457.1 (F-box protein At1g49360-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 154.5 bits (389), Expect = 4.5e-34 Identity = 80/116 (68.97%), Postives = 86/116 (74.14%), Query Frame = 0
BLAST of Lsi01G018610 vs. NCBI nr
Match: XP_022979671.1 (F-box protein At3g56470-like [Cucurbita maxima]) HSP 1 Score: 153.7 bits (387), Expect = 7.7e-34 Identity = 80/116 (68.97%), Postives = 86/116 (74.14%), Query Frame = 0
BLAST of Lsi01G018610 vs. NCBI nr
Match: XP_038891474.1 (putative F-box protein At5g55150 [Benincasa hispida]) HSP 1 Score: 147.1 bits (370), Expect = 7.2e-32 Identity = 78/116 (67.24%), Postives = 85/116 (73.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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