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Lsi01G018420 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTAGGAGTCAGTAAAGGTATACCATTAATAGGTATCCACCATTCCTGTTTTGAATGAAATATATCATATATCCGTCTTAGTACTCAGTCTGTACACTAAGGTAGAATTCTGTACTGAGTAGTAGTATCGGTTTTTAGACCAGAGTGGGACCTGAAGAAAGAAAAAGATCGATCTCCATCTGTCAAGGAGAAGGCATGGTACCTCAACCAGCTGGGCAAGGGACTACTACTGAAAGAACTCGTAGGGTTGTGTTAGACTGAACTCTAAAAGTCAACTTCAACGGGATCCGATAGCAGGTGCCCTAGACTTCTGCCCTTTTTTTCTTTCTTTTTGCATTCCTTAGGGCCCTTAAAAAGGGAGTTGTTTAGAGTTCTTGGCTAGTAATAAACTTTCTTGGTGGTTGGATAGGGGTAAGATCTCTTTGGCTGCAGTACATGGACGGTAGTTGGAGTTGGCGACTCTCTTAGAGTTCCCTCATCTAGGATCCTTGGGGAAGAGGATCAAGTTGGCCCTTGCGAACAACTTGATGTACAAGATCCCTTCAACCCTTTGAGCGAAATGCGACAAAAGGAAAAATCCATGGACCGACTCCATCATCTTCACCCCGTAGGAACTACGAGATCACCCCAAGGACACCTTTGGTATCTAGGGGTCGCGAACCGACCATAG ATGGAGTGGGACCTGAAGAAAGAAAAAGATCGATCTCCATCTGTCAAGGAGAAGGCATGGTACCTCAACCAGCTGGGCAAGGGACTACTACTGAAAGAACTCGTAGGTACATGGACGGTAGTTGGAGTTGGCGACTCTCTTAGAGTTCCCTCATCTAGGATCCTTGGGGAAGAGGATCAAGTTGGCCCTTGCGAACAACTTGATGTACAAGATCCCTTCAACCCTTTGAGCGAAATGCGACAAAAGGAAAAATCCATGGACCGACTCCATCATCTTCACCCCGTAGGAACTACGAGATCACCCCAAGGACACCTTTGGTATCTAGGGGTCGCGAACCGACCATAG ATGGAGTGGGACCTGAAGAAAGAAAAAGATCGATCTCCATCTGTCAAGGAGAAGGCATGGTACCTCAACCAGCTGGGCAAGGGACTACTACTGAAAGAACTCGTAGGTACATGGACGGTAGTTGGAGTTGGCGACTCTCTTAGAGTTCCCTCATCTAGGATCCTTGGGGAAGAGGATCAAGTTGGCCCTTGCGAACAACTTGATGTACAAGATCCCTTCAACCCTTTGAGCGAAATGCGACAAAAGGAAAAATCCATGGACCGACTCCATCATCTTCACCCCGTAGGAACTACGAGATCACCCCAAGGACACCTTTGGTATCTAGGGGTCGCGAACCGACCATAG MEWDLKKEKDRSPSVKEKAWYLNQLGKGLLLKELVGTWTVVGVGDSLRVPSSRILGEEDQVGPCEQLDVQDPFNPLSEMRQKEKSMDRLHHLHPVGTTRSPQGHLWYLGVANRP Homology
BLAST of Lsi01G018420 vs. ExPASy TrEMBL
Match: A0A6B9QFK3 (ORF43m OS=Nitraria tangutorum OX=357929 GN=trnA-UGC PE=4 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 4.3e-27 Identity = 66/79 (83.54%), Postives = 67/79 (84.81%), Query Frame = 0
BLAST of Lsi01G018420 vs. ExPASy TrEMBL
Match: A0A6B9QF48 (ORF43m OS=Nitraria roborowskii OX=357932 GN=trnA-UGC PE=4 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 4.3e-27 Identity = 66/79 (83.54%), Postives = 67/79 (84.81%), Query Frame = 0
BLAST of Lsi01G018420 vs. ExPASy TrEMBL
Match: A0A6B9QGL2 (ORF43m OS=Nitraria sibirica OX=357931 GN=trnA-UGC PE=4 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 4.3e-27 Identity = 66/79 (83.54%), Postives = 67/79 (84.81%), Query Frame = 0
BLAST of Lsi01G018420 vs. ExPASy TrEMBL
Match: U5CKY2 (Uncharacterized protein OS=Amborella trichopoda OX=13333 GN=AMTR_s02909p00006680 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 1.6e-26 Identity = 65/79 (82.28%), Postives = 67/79 (84.81%), Query Frame = 0
BLAST of Lsi01G018420 vs. ExPASy TrEMBL
Match: A0A200PP77 (Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_8595g6 PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 2.8e-26 Identity = 63/79 (79.75%), Postives = 66/79 (83.54%), Query Frame = 0
BLAST of Lsi01G018420 vs. NCBI nr
Match: QHE65624.1 (ORF43m [Nitraria roborowskii] >QHE65704.1 ORF43m [Nitraria sibirica] >QHE65784.1 ORF43m [Nitraria tangutorum] >QHE65637.1 ORF43m [Nitraria roborowskii] >QHE65717.1 ORF43m [Nitraria sibirica]) HSP 1 Score: 130.6 bits (327), Expect = 8.8e-27 Identity = 66/79 (83.54%), Postives = 67/79 (84.81%), Query Frame = 0
BLAST of Lsi01G018420 vs. NCBI nr
Match: ERM97427.1 (hypothetical protein AMTR_s02909p00006680 [Amborella trichopoda]) HSP 1 Score: 128.6 bits (322), Expect = 3.3e-26 Identity = 65/79 (82.28%), Postives = 67/79 (84.81%), Query Frame = 0
BLAST of Lsi01G018420 vs. NCBI nr
Match: OUZ99998.1 (hypothetical protein BVC80_8595g6 [Macleaya cordata]) HSP 1 Score: 127.9 bits (320), Expect = 5.7e-26 Identity = 63/79 (79.75%), Postives = 66/79 (83.54%), Query Frame = 0
BLAST of Lsi01G018420 vs. NCBI nr
Match: YP_009758287.1 (hypothetical protein [Rubus amabilis] >YP_009758301.1 ORF43m [Rubus amabilis] >QIN90067.1 hypothetical protein [Rubus amabilis] >QIN90081.1 ORF43m [Rubus amabilis]) HSP 1 Score: 125.9 bits (315), Expect = 2.2e-25 Identity = 64/79 (81.01%), Postives = 66/79 (83.54%), Query Frame = 0
BLAST of Lsi01G018420 vs. NCBI nr
Match: PQP98136.1 (hypothetical protein Pyn_20559 [Prunus yedoensis var. nudiflora] >QCE13753.1 hypothetical protein DEO72_LG11g751 [Vigna unguiculata]) HSP 1 Score: 125.9 bits (315), Expect = 2.2e-25 Identity = 64/79 (81.01%), Postives = 66/79 (83.54%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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