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Lsi01G018350 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTAAAATTTATCCCTAAGAAATCATTTTTCAAGTAGAGGCTTGATGGACAAAGGTAGGTGCTATGGCACCTTAGTATAAACTGATTTAGGTCAGTCCCTACATGATGATTTTAACCCAAGTAAAGGATGTTAGAAACTGAGAGGTCAGCACTGGGAGAAGAAGAAGGGACGGTAGAAGAATGGCGAGGGCTAATCAAATATTTCTCAAGGCCCGTAAAGCCCTCCATGATCTCGAACTCCTCAAGATCTTGCAATCCGAGATAGCCCACGAGCTTTCTTCAACCCAATTTCAGGTCCTCTTTAATTTCCTCGCTTCGATTCCACCATTAAAACCTTTTTCAATCAATCTCTTCATCATCTCTGATTTTACATTTCTCTTTTTCCCATTCTCAATCGCAGAACCATGATCACAACGGCATTTCCAGCGATTTCGCTTTGGAACATGACTCGCCCAAGTCCCAAGACGTGGTGTTGCGGCGAAAATTGGAATCGGGTGAGGAGGTCGCAATTTCTGCTACATCGGGCCCTCTCAGATTTGGACACCAAGGGGCTTTTCCGAGGGAGATTTTGATGAAGATTTGTGTGAGTAAGCCTGGAGTTAGCTCTCTTTTGCAGTTTGATTGTGGGGTTTCAGAGGACGGTCATGATGGGTCGCCTTTCAAAATCTACAATGCCTATTATCTTCAATCTTCAACTTGTTTGGGACCTTCTGTTTATAGAGGCCCTTTGTTCAGGTACTACTTTTTGGCAACTCTAATAGAAGCAAGAATTAACATTGAGCATAGCCATTTTCGTTTTATTGCGTCTTTGAGAAGCTAG CTAAAATTTATCCCTAAGAAATCATTTTTCAAGTAGAGGCTTGATGGACAAAGGTAGGTGCTATGGCACCTTAGTATAAACTGATTTAGGTCAGTCCCTACATGATGATTTTAACCCAAGTAAAGGATGTTAGAAACTGAGAGGTCAGCACTGGGAGAAGAAGAAGGGACGGTAGAAGAATGGCGAGGGCTAATCAAATATTTCTCAAGGCCCGTAAAGCCCTCCATGATCTCGAACTCCTCAAGATCTTGCAATCCGAGATAGCCCACGAGCTTTCTTCAACCCAATTTCAGAACCATGATCACAACGGCATTTCCAGCGATTTCGCTTTGGAACATGACTCGCCCAAGTCCCAAGACGTGGTGTTGCGGCGAAAATTGGAATCGGGTGAGGAGGTCGCAATTTCTGCTACATCGGGCCCTCTCAGATTTGGACACCAAGGGGCTTTTCCGAGGGAGATTTTGATGAAGATTTGTGTGAGTAAGCCTGGAGTTAGCTCTCTTTTGCAGTTTGATTGTGGGGTTTCAGAGGACGGTCATGATGGGTCGCCTTTCAAAATCTACAATGCCTATTATCTTCAATCTTCAACTTGTTTGGGACCTTCTGTTTATAGAGGCCCTTTGTTCAGGTACTACTTTTTGGCAACTCTAATAGAAGCAAGAATTAACATTGAGCATAGCCATTTTCGTTTTATTGCGTCTTTGAGAAGCTAG ATGGCGAGGGCTAATCAAATATTTCTCAAGGCCCGTAAAGCCCTCCATGATCTCGAACTCCTCAAGATCTTGCAATCCGAGATAGCCCACGAGCTTTCTTCAACCCAATTTCAGAACCATGATCACAACGGCATTTCCAGCGATTTCGCTTTGGAACATGACTCGCCCAAGTCCCAAGACGTGGTGTTGCGGCGAAAATTGGAATCGGGTGAGGAGGTCGCAATTTCTGCTACATCGGGCCCTCTCAGATTTGGACACCAAGGGGCTTTTCCGAGGGAGATTTTGATGAAGATTTGTGTGAGTAAGCCTGGAGTTAGCTCTCTTTTGCAGTTTGATTGTGGGGTTTCAGAGGACGGTCATGATGGGTCGCCTTTCAAAATCTACAATGCCTATTATCTTCAATCTTCAACTTGTTTGGGACCTTCTGTTTATAGAGGCCCTTTGTTCAGGTACTACTTTTTGGCAACTCTAATAGAAGCAAGAATTAACATTGAGCATAGCCATTTTCGTTTTATTGCGTCTTTGAGAAGCTAG MARANQIFLKARKALHDLELLKILQSEIAHELSSTQFQNHDHNGISSDFALEHDSPKSQDVVLRRKLESGEEVAISATSGPLRFGHQGAFPREILMKICVSKPGVSSLLQFDCGVSEDGHDGSPFKIYNAYYLQSSTCLGPSVYRGPLFRYYFLATLIEARINIEHSHFRFIASLRS Homology
BLAST of Lsi01G018350 vs. ExPASy TrEMBL
Match: A0A6J1HWH3 (uncharacterized protein LOC111467274 OS=Cucurbita maxima OX=3661 GN=LOC111467274 PE=4 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 3.6e-65 Identity = 128/149 (85.91%), Postives = 135/149 (90.60%), Query Frame = 0
BLAST of Lsi01G018350 vs. ExPASy TrEMBL
Match: A0A6J1EKM2 (uncharacterized protein LOC111435528 OS=Cucurbita moschata OX=3662 GN=LOC111435528 PE=4 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 6.1e-65 Identity = 128/149 (85.91%), Postives = 134/149 (89.93%), Query Frame = 0
BLAST of Lsi01G018350 vs. ExPASy TrEMBL
Match: A0A6J1DM07 (mitochondrial acidic protein mam33 OS=Momordica charantia OX=3673 GN=LOC111021294 PE=4 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 8.3e-62 Identity = 124/149 (83.22%), Postives = 132/149 (88.59%), Query Frame = 0
BLAST of Lsi01G018350 vs. ExPASy TrEMBL
Match: A0A5A7V534 (Mitochondrial acidic protein mam33 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G003990 PE=4 SV=1) HSP 1 Score: 240.4 bits (612), Expect = 5.9e-60 Identity = 118/150 (78.67%), Postives = 129/150 (86.00%), Query Frame = 0
BLAST of Lsi01G018350 vs. ExPASy TrEMBL
Match: A0A5D3C1A8 (Mitochondrial acidic protein mam33 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G001810 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 2.1e-57 Identity = 116/150 (77.33%), Postives = 127/150 (84.67%), Query Frame = 0
BLAST of Lsi01G018350 vs. NCBI nr
Match: XP_023544221.1 (uncharacterized protein LOC111803860 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 260.0 bits (663), Expect = 1.5e-65 Identity = 129/149 (86.58%), Postives = 135/149 (90.60%), Query Frame = 0
BLAST of Lsi01G018350 vs. NCBI nr
Match: KAG6603196.1 (hypothetical protein SDJN03_03805, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033506.1 hypothetical protein SDJN02_03228 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 258.8 bits (660), Expect = 3.3e-65 Identity = 128/149 (85.91%), Postives = 135/149 (90.60%), Query Frame = 0
BLAST of Lsi01G018350 vs. NCBI nr
Match: XP_022967898.1 (uncharacterized protein LOC111467274 [Cucurbita maxima]) HSP 1 Score: 257.7 bits (657), Expect = 7.4e-65 Identity = 128/149 (85.91%), Postives = 135/149 (90.60%), Query Frame = 0
BLAST of Lsi01G018350 vs. NCBI nr
Match: XP_022928687.1 (uncharacterized protein LOC111435528 [Cucurbita moschata]) HSP 1 Score: 256.9 bits (655), Expect = 1.3e-64 Identity = 128/149 (85.91%), Postives = 134/149 (89.93%), Query Frame = 0
BLAST of Lsi01G018350 vs. NCBI nr
Match: XP_022153881.1 (mitochondrial acidic protein mam33 [Momordica charantia]) HSP 1 Score: 246.5 bits (628), Expect = 1.7e-61 Identity = 124/149 (83.22%), Postives = 132/149 (88.59%), Query Frame = 0
BLAST of Lsi01G018350 vs. TAIR 10
Match: AT2G41600.2 (Mitochondrial glycoprotein family protein ) HSP 1 Score: 121.3 bits (303), Expect = 7.7e-28 Identity = 66/152 (43.42%), Postives = 92/152 (60.53%), Query Frame = 0
BLAST of Lsi01G018350 vs. TAIR 10
Match: AT2G41600.1 (Mitochondrial glycoprotein family protein ) HSP 1 Score: 121.3 bits (303), Expect = 7.7e-28 Identity = 66/152 (43.42%), Postives = 92/152 (60.53%), Query Frame = 0
BLAST of Lsi01G018350 vs. TAIR 10
Match: AT2G41600.4 (Mitochondrial glycoprotein family protein ) HSP 1 Score: 121.3 bits (303), Expect = 7.7e-28 Identity = 66/152 (43.42%), Postives = 92/152 (60.53%), Query Frame = 0
BLAST of Lsi01G018350 vs. TAIR 10
Match: AT2G41600.3 (Mitochondrial glycoprotein family protein ) HSP 1 Score: 119.4 bits (298), Expect = 2.9e-27 Identity = 65/151 (43.05%), Postives = 91/151 (60.26%), Query Frame = 0
BLAST of Lsi01G018350 vs. TAIR 10
Match: AT2G41600.5 (Mitochondrial glycoprotein family protein ) HSP 1 Score: 119.4 bits (298), Expect = 2.9e-27 Identity = 65/151 (43.05%), Postives = 91/151 (60.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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