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Lsi01G018340 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTAATGTATCTTGACAACCCTATGTTACTAAGGTTTGTCTAGTGAAATTAGTCATGATGCACGTAAATTACTAAGAAAAGAAATAGCTGCTTCATTCTTTTCCTCCGTTAAATGCAATTCATCTGCTTGAGTTATTAACATGCTTAAAAACTTAACCATCATGGGTTTGGCTAGTGGTCGATAAGGGCCATGAGTTTAATAAGGGACTTAGACGAAATGAGTTCAATCCATAGTAGTCACCCACCTAAGATAAAAAAAAAAAAATCTTATGAGTTTTCTTGGCACCCAAATACTGTAGGGTCAAGCAAAGCAAGTTGTCCTGTGAAATTAGTCGAAGTGTGCATAAGCTGGCCTGAACACTCACGAGTATAAGAAAAAAAGAAACTTGCTTAAAAACTTTGCAGAATCATCATCTTCTCCCCAGTTATCTTTCCTTTTTTAACTTATCCATCTGTTGATTCTTCCAAACAGTATAACCTTGAAACTACATCCCCATTCAGTTGTTGCTTTCCTGAAGCTCATGGAGTTCATGTTGATTCTTCTTCTTCTTTTATTTTGATAGAAACAACTACATTCATTGAGAAAAAAAATGAAAGAATACAAGGGCGTACATAACAACTAAGCCCACAACAATGTTGATTTTTCCTGCCTATTAGTTTCAACTCTCTTCATTTTCTAGTTTCTATGCTAATAATTGCTAAATTATCTTCATTTTTTAACCTTTGTAACTGTGCAGTGAGCCAATTTTATGCATTAAACTTCTAATATCATAAAATAAAATCGTAAATGTGAATAAAATATGAAATTATGACTTCTAGTTGGATAGTAAATTTTTCTTTTGATGATTTCTGGCTAGATATGAGCATTCTTGTGGGCTGGACTGCACTATTTTGTAGATATCGATTCTTCTGATCATGAACATTTTTTAGTCAGATTTATCATTTTCTTGTTGAGTGTGTTTAAGTTCGCATTCATGGTTGGATTTGGCTATTTGTGTAGCTTGATTTTGAGTTTTTTTCTTTGTTCATTAGTTCACAAGCAGTTTTCTAATTTAGCTTTGAGAATATGTTAATTTCACAGCTTGTTTAGAGTTCTATTTAAGGTTAAAACTCACTAAGCCAAGTACGGATGGAAAGTTGATTCTTTCCAAACTTGAATGGTAAAAACATATTGTATTACATAGAGCGGTCATCAACATTATTAATTATGAATAGACAAAACCTATACATATATGAATCATCACAAGCTTCCTTGATGCTTAATGTCAATTTGACTTTAGTTTCCTGGTTGATAACTGAAAATGTGTTTGTGAATGCCTTATTTTGGCTGCATGTACTTTGCTAAGCATCACGATTCATGATATTTAGGCATCCATTCTCTGATCTCTTCAGCTTGGTTTTGTCATTCATCTTAAGTTTTACCTGTTTTTTCGAGCTTTCTTCTCTAAGATACTTGAAACTTCTGTATCCATGGCAGCTCATTAGATCCTCAATTACAAGACGCGCTTAAAGAATACCTAATCAGTAGAGGCGTTGAAGAAAGCCTGACCAACTTCCTTCTCATTCACCTGCATAAAAAAGAGCAAGGTCAGTATTTGAATTGGTTGCAAAATGTCGAATCTTTGATAGCTAAAAGACAATCGAACGAACTTTAG ATGCTAATCTCATTAGATCCTCAATTACAAGACGCGCTTAAAGAATACCTAATCAGTAGAGGCGTTGAAGAAAGCCTGACCAACTTCCTTCTCATTCACCTGCATAAAAAAGAGCAAGGTCAGTATTTGAATTGGTTGCAAAATGTCGAATCTTTGATAGCTAAAAGACAATCGAACGAACTTTAG ATGCTAATCTCATTAGATCCTCAATTACAAGACGCGCTTAAAGAATACCTAATCAGTAGAGGCGTTGAAGAAAGCCTGACCAACTTCCTTCTCATTCACCTGCATAAAAAAGAGCAAGGTCAGTATTTGAATTGGTTGCAAAATGTCGAATCTTTGATAGCTAAAAGACAATCGAACGAACTTTAG MLISLDPQLQDALKEYLISRGVEESLTNFLLIHLHKKEQGQYLNWLQNVESLIAKRQSNEL Homology
BLAST of Lsi01G018340 vs. ExPASy Swiss-Prot
Match: O94675 (Mitochondrial acidic protein mam33 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC776.07 PE=3 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 2.0e-04 Identity = 20/49 (40.82%), Postives = 32/49 (65.31%), Query Frame = 0
BLAST of Lsi01G018340 vs. ExPASy Swiss-Prot
Match: P40513 (Mitochondrial acidic protein MAM33 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MAM33 PE=1 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 2.6e-04 Identity = 19/47 (40.43%), Postives = 33/47 (70.21%), Query Frame = 0
BLAST of Lsi01G018340 vs. ExPASy TrEMBL
Match: A0A6J1DM07 (mitochondrial acidic protein mam33 OS=Momordica charantia OX=3673 GN=LOC111021294 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 6.0e-20 Identity = 50/58 (86.21%), Postives = 56/58 (96.55%), Query Frame = 0
BLAST of Lsi01G018340 vs. ExPASy TrEMBL
Match: A0A6J1HWH3 (uncharacterized protein LOC111467274 OS=Cucurbita maxima OX=3661 GN=LOC111467274 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 1.0e-19 Identity = 52/58 (89.66%), Postives = 55/58 (94.83%), Query Frame = 0
BLAST of Lsi01G018340 vs. ExPASy TrEMBL
Match: A0A6J1EKM2 (uncharacterized protein LOC111435528 OS=Cucurbita moschata OX=3662 GN=LOC111435528 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 1.0e-19 Identity = 52/58 (89.66%), Postives = 55/58 (94.83%), Query Frame = 0
BLAST of Lsi01G018340 vs. ExPASy TrEMBL
Match: A0A5N6RKE9 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_016789 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 6.9e-16 Identity = 41/54 (75.93%), Postives = 50/54 (92.59%), Query Frame = 0
BLAST of Lsi01G018340 vs. ExPASy TrEMBL
Match: A0A1S3BK83 (uncharacterized protein LOC103490527 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490527 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 7.6e-15 Identity = 42/44 (95.45%), Postives = 44/44 (100.00%), Query Frame = 0
BLAST of Lsi01G018340 vs. NCBI nr
Match: XP_023544221.1 (uncharacterized protein LOC111803860 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 107.1 bits (266), Expect = 5.6e-20 Identity = 52/58 (89.66%), Postives = 56/58 (96.55%), Query Frame = 0
BLAST of Lsi01G018340 vs. NCBI nr
Match: XP_022153881.1 (mitochondrial acidic protein mam33 [Momordica charantia]) HSP 1 Score: 105.9 bits (263), Expect = 1.2e-19 Identity = 50/58 (86.21%), Postives = 56/58 (96.55%), Query Frame = 0
BLAST of Lsi01G018340 vs. NCBI nr
Match: KAG6603196.1 (hypothetical protein SDJN03_03805, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033506.1 hypothetical protein SDJN02_03228 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 105.1 bits (261), Expect = 2.1e-19 Identity = 52/58 (89.66%), Postives = 55/58 (94.83%), Query Frame = 0
BLAST of Lsi01G018340 vs. NCBI nr
Match: XP_022967898.1 (uncharacterized protein LOC111467274 [Cucurbita maxima]) HSP 1 Score: 105.1 bits (261), Expect = 2.1e-19 Identity = 52/58 (89.66%), Postives = 55/58 (94.83%), Query Frame = 0
BLAST of Lsi01G018340 vs. NCBI nr
Match: XP_022928687.1 (uncharacterized protein LOC111435528 [Cucurbita moschata]) HSP 1 Score: 105.1 bits (261), Expect = 2.1e-19 Identity = 52/58 (89.66%), Postives = 55/58 (94.83%), Query Frame = 0
BLAST of Lsi01G018340 vs. TAIR 10
Match: AT2G41600.3 (Mitochondrial glycoprotein family protein ) HSP 1 Score: 70.9 bits (172), Expect = 4.1e-13 Identity = 31/50 (62.00%), Postives = 42/50 (84.00%), Query Frame = 0
BLAST of Lsi01G018340 vs. TAIR 10
Match: AT2G41600.5 (Mitochondrial glycoprotein family protein ) HSP 1 Score: 70.9 bits (172), Expect = 4.1e-13 Identity = 31/50 (62.00%), Postives = 42/50 (84.00%), Query Frame = 0
BLAST of Lsi01G018340 vs. TAIR 10
Match: AT1G80720.1 (Mitochondrial glycoprotein family protein ) HSP 1 Score: 45.8 bits (107), Expect = 1.4e-05 Identity = 19/52 (36.54%), Postives = 35/52 (67.31%), Query Frame = 0
BLAST of Lsi01G018340 vs. TAIR 10
Match: AT5G02050.1 (Mitochondrial glycoprotein family protein ) HSP 1 Score: 44.3 bits (103), Expect = 4.1e-05 Identity = 20/51 (39.22%), Postives = 31/51 (60.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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