Lsi01G018310 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi01G018310
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr01: 18962575 .. 18965434 (+)
RNA-Seq ExpressionLsi01G018310
SyntenyLsi01G018310
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGTAAGAAATGGGTTTTTATCAGAGATGAAGAATGTGAAGGGGAAAAAAGAAGAAGAAGAAGAAGGAGGAGGAGGCGTAGTAGCGAAAGGCATTGATGATGGTATGGTGGAGTCAAGGCTTTAGGCTGCTCTATCTGTACACAAAAACAGCATTAACTGAAGAGGGGCCAACAATCCAACAAGCAAATGCATATGCTTGTATAACTATAGATAGATCCCTAATTGGATTATGGTTTTAGGGGCATTTTCGTAATTTTTGTCAAGTTTTTGATTGAGACTTGTATTAAAAAGAGTAATAAATTTCATTTCTAAACGGGGAATTATAAATATGGTTGGAAAGATTTTTAGAATTGCGTCTATTTAGTTGTAGTTTAAAGAAACGTTTGTTAATCTTAGAGATGTGACACGTTTTTCTGGATAAATGTTGATTAATTCAATACTTTCGTAGCAAATAAGAACTGCCAATAGAAGAAAGTAGGTCGGTTGAATTAAATAGAACGACTTTTAAGATACCATTTTAATATATGTAGTTTGGTACTTATTCAATTCAAATCTACTTTCACATGTCCAATTTTAGTAATGGTATTTTTAATAAATCTTAAATTTAGTCCTTCAAAAATTTTTTAGAGGCAGCTGCAAAAATAGCAAAAAGTATTCTTAAATTTAGGGCTCTATAGAAAAATGAGTCAAACTATTTACAAATATAGAAAATTTTTACAGTCTATCACTGTTAGATCGCGATAGAATTTATTTGCTTGAGCGATAGAATTCTATCGCGGTCTATCACTGATAGACATTGAAATTTTTCTATATTTGTAAATAGTTTGATACTTTTTCTATTTATAGTAATTTCCCTTAAATTTATAAATTGGGAAATTTTCACAGATAGAAAAAATGTCAAACTATTTACAGAAAATAGCAAAAAAAACACTGATAGACATTGATAGACTTCTATCAGCATCTATCAGTGATAGACTTCTATAATTTCTATCACTGATAGACCCTGATAGACTTCTATCAGTGTCTATTACAACTATCTAAAAATTTTGCTATTTTGTGTAAATAGTTTTCCTTATTTTTTTTATTTTTAAAAATCCCCCTTATAAATTTAGCAATAGTTTTTCAAATTTTGTAAATAAAAGAAAAATATTAAGCTGATTTTCATTATTATTATTCCAAATTTACCCTTATTGGTGTACCAGCATGTATATGATAGTATTTTTTATATATTTTATATATTAATTGACTAATATACCAAACATAAAATATAAAAGTTATACAATTGATATACTAAAATTACCATTCAAGTATCATATTTATTAGTCAATAAGTGTTTGTGCATTTGCTATTATTCCTAGACTTTGGCCGATATACCAAACATAAAGCATATAAATTATACAATTGATATGCCAAATTTATCATTGATAAACAATAGTTATCAATCAAGAAGTGCATGTGTATTTACTATTATGTGTGGACTTGATTTGAATTCTTATTCGTTTATTATAGAACATTATTTTTATAGTACATTATAATCAACTTATCTTAAGATTTTTGTGTCTGTATACTTCAGTCCAAAATGGGCGTGCTGAGCGCAAACATAGACATGTGGTTGAGATGGGATTGACCTTGTTAGCACAAGCATCAATGCCTCTTGTTTACTGGTGGGATGCCTTCCTTACTACTACTCAACTGATAAATGGGTTACCAACACCAGTCTTGAACGGTAAATCTCCTCTTCAGCTAATGTTTAATAAAAAATTTGATGTCACTAATATTCTGAGTTTTTAGTTGTGCTTGTTTTCCATGCCTGAGACCATACCAGTAACATAAGTTTCAATTTCACTCAGAAAAGTGTGTGTATTTGGGGCCTAGTCCAGTTCATAAAGGACATCGTCAGGGGTTGATTTGTGTTTATTGGTTCTTCTCTTACCAATAAACATTCTTCTAAATTTTTTAATTGAACTGAGTTAGAATTTGAATTATAAATTGCCAAACTAAAATCAGTATAATAAATAATAGTTCATTTTAGACTAATCACATTAAAAAAGATTTAATTTACAAATTAAATTTATTTGAGGCAAAATAAATATATATATGATATTCAATTTTTGATCTTAGTTAAATACAAACTAAATATATATTTCATTTTCCACTGAGTCATTTTAAGGAAAAACTACCGGCACAATTTTGTTTAAATTAATCATTTTTTCATATATTTAAGTTAGTCCATTTAAAATAAAAAATATAATAAACACAATTTTAATTCTGAGTTTAGTTATATTTGAAAAATATGAAAATTAATTTATTTTAAACTTAAATATATTAAAATAATTAAGATGATAATTTAAAACTAATCTAAAATCTAACCACCAATTAGATACAATAAAATATTTCACAAATTCAAGATTTATAAATCTACACTTATTTCTCAAGCTTCTTAAGTCGGTAATTCAAACATAGACTTTTTAAACCCAGACTTCCTAAACATACACTCCAAATACATTTTTCTTAAACTCAGACGGCCTAAATCCCAAGCTTAGCATTCTCAGACTTAAGATTCCAAACCTGCAACAAACACCCCTTTAAGTGTCAGTCGTCCCACACTTGCACTTAAAAATGAAAAAGGAGAAGAGAAAGGAACTTCAACCGCACCTTCTTAATCTTTTTCACGCGTTCGACTACAAGCAGGTTCCCCATCGCTGCCACTTGCTCCATTTGCCTACAGTCACCGCGTCGATGTCATTATGGGTCAGAGCTTTGTTGTCGACCGCCAAGCGAGGACACGTTGCCGCTGTGGGTTCTATCTCTCTCATGAAAGGGAGGCTGTGAATAGGACTCGCCGCCTCGTGTAG

mRNA sequence

ATGGATGTAAGAAATGGGTTTTTATCAGAGATGAAGAATGTGAAGGGGAAAAAAGAAGAAGAAGAAGAAGGAGGAGGAGGCGTAGTAGCGAAAGGCATTGATGATGGTTCCCCATCGCTGCCACTTGCTCCATTTGCCTACAGTCACCGCGTCGATGTCATTATGGGTCAGAGCTTTGTTGTCGACCGCCAAGCGAGGACACGTTGCCGCTGTGGGTTCTATCTCTCTCATGAAAGGGAGGCTGTGAATAGGACTCGCCGCCTCGTGTAG

Coding sequence (CDS)

ATGGATGTAAGAAATGGGTTTTTATCAGAGATGAAGAATGTGAAGGGGAAAAAAGAAGAAGAAGAAGAAGGAGGAGGAGGCGTAGTAGCGAAAGGCATTGATGATGGTTCCCCATCGCTGCCACTTGCTCCATTTGCCTACAGTCACCGCGTCGATGTCATTATGGGTCAGAGCTTTGTTGTCGACCGCCAAGCGAGGACACGTTGCCGCTGTGGGTTCTATCTCTCTCATGAAAGGGAGGCTGTGAATAGGACTCGCCGCCTCGTGTAG

Protein sequence

MDVRNGFLSEMKNVKGKKEEEEEGGGGVVAKGIDDGSPSLPLAPFAYSHRVDVIMGQSFVVDRQARTRCRCGFYLSHEREAVNRTRRLV
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G018310.1Lsi01G018310.1mRNA