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Lsi01G018290 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTTTATTCCAAAAGCGCCCTCTTAGAATCTTCATTTCGAAGTTGGAGCTTTCGCAACAATGGCGGAACCACTTGGCGGAGGCAACCACGATCTCGAGCAGACCTTGAAGCCCTTCTTTCAAAGAGCTTCTGAAGCCGAGGTTTGATTTCAAAACCCTTCACTTTTCTCCCTCTTTCCCCTCTAAATCTAAACCCTCCAACTCTTATCTTCTTTGCTTGGATTTCTAGGTGTATATCATTGCGATTTTGCTTGATTTTTTTTTTCCTGAGCACTATGGAAAGATTTGAAATGGGTGGAAAATGAGCTACCGTGAGTGATGAATTTTGGATTTAGTCTCCTAGGTTTTGGATGATGGAGTTTAATTCAAGTTTATGGCTGCCAATTAGGTACTTAGATTATGGAAAATTTCCAGCTCTATGTTAGCATGGAGGAACTAATATTTACTCATATCACACCACTTGTCAAAATATCAAGGTGTACACTGATAATGCTTTTCTTGGACCTCAGTTTAAACCATGGTGTCTACTTATCTGGGATAAATTTATGTATAATTTATGTATAATATATGTATATGTGTGTGTGTGTGATAAGAATGCCAGGCATTGTAAGGTCAGCAGATTTCTTGTATGATAGACTGAACTGAGATGTCTGTAAGATATTTTAGACAAAACATAATGTTTGGCCAAATCAAGACATTAGAATACTATGAAACCAATCACCATGAGTTGACCTACTGGCTATTTGGGTTCAAACAAGTGAATCAAAAAAGAAAAAAAGAAAAAAAGAAAAAAATATATGGACCTTGGAGGGAATTGGTTCAACTTCAAACCCTATGGTTAAAATCCTCTGAGTTTCCTAACAAATTATATATATATATATTTTGTAGGAAAGGAACAGATAATTGTCCTTAACATGACTAAGATACTCTAAAGTATATATATATTTTGTGAAATGCACTAATAAAATAATGAATTTTGCAGTGACGCAACAAAATATAAATTATAGTAGCAGGGGACCTAGTGTACTATAATTTTTTTTTCTACACGCACCACTAAATTGGAGGTTAATTGCGAGTGCAATTAATTTACCTATGAACCTCTTCCAACTGATCTAAACTATTCAACAATAAGTTTTTCCTTTTATAATACTAAATTAGAACAATACTATGATTACTTTACCATAGTTCCCTTTCATTTATAACATTCTTGAACAAATACAAAAGATGGATATCTTATCGGCAATATGTTTGTTGTGACTTAGTGAATCGTACCAGGAACTCACTGCTGATACTGGGCATCTGTGTTGCTTTGATTAGTAAATATGCTTATTAGGACCTTAGACTTTTGTAGCTATCATGGGTTGGCCTAGTGGTAGATAGGGGGTATGACTTTGATAAAGACTAAGAGGTTGTGAGTTCAATCCCCATGGTAGTTACCTGCCTAAGATTTAATATCGTACGAGTTTTCTGGACACGCAAATATTGTAGGGTTAAGTGGGTTGTTCCGTGAGATCAGTCGAAGTGAACGTAAGATGACTCGGACACTACAAATATCAAAAAAGGAAAAAAGGACCTTGGACTTTTGCTTAAATTTTGGTTCATCATCATAAAATTCTATTGAAATGGAAACCAAGGTCCATTACTTCTCGAATAGAGATATTTCCTTGTTCCCCTTTCTTTTTAATTGGATGGGAGTGATTATGAAATTGTTAAAATCAATTATGAAATGGTTAAAATCGCTTTTTTCATATGTAAAATCAATTTGAAAGATATCTTTAATCACTTAAAATCAATTTAATATTTAATTTTAACTTTTACACACATTTTTCATACTATTAAAATTTATTTTGAATGATTAAAAATATTTTTCGAGATATTTTGAAAATGTCAAAAGTGATTTTAACAATTTTAGAATCATTCCCAAACATGTCATAAAACTGTAAGGGAAATTGCAATAATGCACAGGACTTTGGAGGCCAAATGTAGAGGTAAAGGGGCATTTGGGTTAGTCTAGGAAGTTGTTAAATCTGTGAAGTTTTTCAGTCGTGGAGTCTACAATGTAAGGAGTTGACAAGTCATGAAATTGATATTTTTTAGTTATAGGGCCCACAGTGGGTTTAAAAACTCCTTAGGCCAAACAAGGTACACTCCCTCAATTCCTACTCCTTTGGCCAAACATGCCCTAAGGGCATTTGGGCCCTCAACTTGCCTTGGGTGGAGTGGGTTATTATAGCCCACTCAATGTTTGGGCTTCCCATTATATTGAAGTTCCCAATTATTATAATCCACACTTAACTACAGTAAAACTATTTGAAAACCCTTATTGTTTACCGTGTTTACTATTTTGTAATCATCCTCTGTTCTCATTTGTAACCCATACTAAAATAGTGTGCATCCCAAACACAGACTATTATAACCCACAGACTACAATAGCCACGGACCAAAATAACCAATTTAGCGCCTCAAATAGTCCCTTACTGACCTTTTCAAATAGGTTAATATTGCACAAATATTATATTTTCTTATTTATAAAATGAAAATGTCTCTAGCTAACTTGAGCATAGCTCAACTAATTAAGGTATCACCTTCGACCAAAAGGTTACAGGTTCAAATCCCTTCACACCATATGTTGTTAAACTAAAAACAAAAAATGTGGCACTAAACATAGACCAAAGGAAAATAAGTGGTAGTTTTAGGCAAAGAAGCCTAGAGAAGGATGCTTCCCACGTAAGAAAATCATATATATAGAGAGAGAGGTTACATTATACTATATTTTAAATAGTGCTTTAACCTAGTTAAATTTCAATTTGGCACCTCTTCTTTTTTTAGAAGTTTTGGAGAGTTTGTTGATTTCGGTTTATCTTCCCATTATTCTATAGTAATACTTATGTTAATGTCTAATTTATTTCCAGGATCGTTTGTCAAGATTAGAAGCTGCACTCTTGAGTAAGAAAGGTACGTCTCATGGCTGTTTCCCTTTTAGGGAAAGAATCACACCACATCACCAACAACACTAACATGAATGAATGTATGAAATGAACGTCTTTTTCACATTTCTGAATATCGACAATGCAACCATCCAGATGTCCATAACGAAGAACATCTGAAAACGATCAGTGAACTCCAGTCGAAGCTAGACAGCGCAAATGAAGCACTAATCGCACAACGGAAAAAGGCAAGTATATTTGGTGCACCATGTTGTAATGTTTGTATTTCAACTTGATATCTGGAAACTTAAAAGCTCGGACACTTTAGTTTGGTTAGTGTATTCGTGTCGGACACTTAACACTCGACACTTGTTGGACGCGTATCAGACACTTATTAGTGCAAATGTGTTAGACATGCATAGAACAGTTGTTAAGTAGACTAAAAAGATACATATATGATAACAACTTGAGTGTAAAACACTGAATTACATTAAGCTTAAGTCTTTTAAGCATATAAATGCATCAACCCATTTATTTTGAATTTTATTTTGGAAGTGTCCTTGCTGTATCGTGTTTTAGATATTTAGAATATGGCGTATTGTTGTATTCGTATTGTGTCGTATCGGTGTCTCCGTGTTTGTGCTTCTTAATTTGGAAAGATAAAAGAACAGAAAAATTGGAGTTGCTTATTTGGGGTTATTATGCAGGCTGAGATGGTTGCTGTAGAAAATGCTAAGCTTGAGTATCGCATAATCCATCTTGTGAGGACAGCTAGGGAAACCCGTCAAAAGTTGGAGCAAGAATGACATTTTTTTTTTTTTTTTTCTAGTTGAAAGAGAATTGGATGGGTTATTATTTTTTTTTCCTTTTATAATTTCCCTTACAATTTAAAACATTTGGAAGATTGAGATAGTAAATTGAAGAATGTGAATTGAATTTTTGAGATCCCAACCCGGAGTGATTGGATTTTTTTTTTCAACAACTGTAGGAATAGAAGATTGAATAATTGACTTTTAGAATGACAATTGGTATCTTATCTACTGAGTCATGGTAACTGAATTTTATTTCCTTACGATTTAGTTTATTGAAAAATATCTCATTGAGTGAAAAATGTGGCATAATGTTTTTTTGGAATCAATTTTTTGGCTAACATATTTATTAGTCAGGTAAAAGGAAAATGCAAATAAGTATTCTGGTTTGGATTCTTCAAATTTCATTATTTTTTCATTATTTCAGCTACTTGAATTATTGAAATTCTAAGAACTTTTTCACATCATTGTAGGATCAAAACACAATACGTACAATATTAAAAAGGGTTGTTTTCAAATATAGAAAAATGAGTTAAACTATTTACAAATATAGAAAATTTCTACCATCTATTAATGATAGAACGCGATAGAATTTATTTGCTTGAGCGATAGAAAGCGATAGAATTCCAAAGTTAAATTTTTCTATATTTGTAAATAGTTTGATACTTTTTCTGTTTATAGTAATTTCCCTATTAAAAAATTACATCGACTCAACAATATGAAAATGAAAAGGGTTTTCTACACTAATAGCCTAATTAAATAGGTCAAATTACAAGAATGACTTAAATCTACCATTTTTTCATGAATAGTTTAATATGTTACAATATTACATAAAAATCAAGCTCAAAAGTCCATAATACTTCATTAATTTCTAGTATTTTTATTTTTAAAAAAATTAAAAAGAAACAAATATGGAAATCATGTGCCTTAAATAGTTTTTTCCAAAATTTTCAAAACCCATCACAAAAGGAAATTTACATTTTCATTAAATTTAGGAGATTTTATTCCTTCCCTAACTTGTCTTACAAAATTTTAATTTTGACTCAAAATTCAGAATCTTTAAATTCAATGGATTGCATTTAATACATAATTGGGCTTTCTACATATAAGGCCCTTATTACACTTTTGTCTTCTTTTAACATAATATTTCATAAATATCTTTGTGGGCTTACAAATTACACAATTGTCTTAGTCCATTTACAAATTTGCCCATTTACCCGTTTTTTAAAACATAAATAATAAATAAATATAAATAAGGTATTTTTTCCCCCAAATGGACGCGCGCGAAGGTTCCCTTTTAAAAATCATTTTTTCTTTAAAAACATATAAGGAAATCGTTCAACTTTCAACATTCTTCCGGCGGTTCCAAAATAATCTTCACTCTCTTCTTCCTTCAACGGCGTCCCTCTTCGTGCTAATTCTTCGTGGAAGCAAAACAGGTATTTCTTACATCTATACATTCGATTATTTCTTCTTTGTCGTTCGATTTCAGTATATTAGGGTTGTTCTTTCATGGATGTTCAACATTACATGTTCACGGCATCTTAGGGTTGTTCATCAACGAACCGATTCCTTCAAAACATTTTGGGATAAACGACTTACTTGTTCACGGCATCTTACGTTCTGATTTTTTTCATCAATGGTGAACTTCATCCTATATTCGGGTTTTTTTTATTAGCCCTGCCATTTCTTCGCACTCTGTAAAGTTTTCTATGACATGCAAACTGGTTTTCTGTATGTATATTGTTCATATTCCACTATTCTTCATAGTTTTGTTATTTTCCATAGTTAGTGGTATTCATTTTTTTATTTTGGTTCAGGAATTGCATGTTCTGTTTTTTTGGTATATTGTAATTAACCAAAATAGTGGTATATTAATCTCATAGGAATATTGGACATATGTCTCTGTTTTTGGAGTTTTAGTGTCATGATTCGGATTACTAGTATATGTAAATGATTGGTGAGTTTATGTTGCGTCGTGTTTCAAAACTAATATGTTATTATATGTACTGTATGTCAGAATAATATATTTGTATGTTTATTGGTTGAAAATGGTGTATGTTTTGGTTAACGCATGTAATGTCGTTCAGTTGTATAAAACTAATATCATTTATTTCCTACACTATTTTATAGAATAATGGTTTGTGTGAAAATACCTGTGAAAAGGGAAGAAAGAAGAAGAAGTGATCGACTTCTTGGGTCGACTAGTAAGCCAATATACAAACAAAAAAGGGAAAAGACTACTGTCATTACCCTTTCTTCTGATGTAAGATTTAATGCATATTATCTCAATTACAAACAAGTGTACATTATAGTAGTTTACTTATAAATTGATCGTAATGATTTCTATTGTGTAAGATGAGGACACAAATCAATTAACTAAACGTGTGAAAGTAGAGGAGGTGCATAGATCATTAGATTTTGAGGAGAGGTTATTAGGGGACATGGCAACAAAGTTCATTCCATTAAGAGTACTATAGCCAGGAGAGAAATTTGTAGAGAATGAAGAAGAGATTGTGTTAGGAACACAATTAGTTCCATACTGTCCTAACTTCGAGGTATATTATATATTCAGTCGTATATATTGAATAAGCGTAAAATATATATTTACTTAATGATTTAATAAACATGCAGATGGGGAATACAAGTAATGAGCATGTGAACATTGAAGAGCATGAGCATACTATTAACGAAACAGTTGATGAGGTCAGAAATCGTGTATATACTACTGCTTTAATAACATATAAATTATAATTAAGATCTATAATCATATATGTATACTAAATTTACTTAAACTGCTTATTAGGAGATTATATGTGAACATCCTGATGATATTATGGGTCAAGAAAATGTAACAACTGAGACTGGACTTAATTGTGACCAACTAGAGGTATACTATCATCAATACATCTTTAATCTAATAAAATTTATATCAGTATATATATATATATACGTTTATATAATATATTCTACTGTCTATCAGGATGACAACGTGCCGCTCAAAACTAAGAGGAGAGAAATATCCAAAGACAGATGGATAAAAGACAATAAAAGATCTGTTCCAAGGACGCGTTCAAGCACGGTAATTACATATCTTTCAGATATATTGGAAATGGAAAATAAAAAGGAAGTTTGATCTATTTTTTATAAATTGTTACGAAATTAGGGTGGAATGAGAACATCACAACAACAAACTGAAAGGAAA TTTTATTCCAAAAGCGCCCTCTTAGAATCTTCATTTCGAAGTTGGAGCTTTCGCAACAATGGCGGAACCACTTGGCGGAGGCAACCACGATCTCGAGCAGACCTTGAAGCCCTTCTTTCAAAGAGCTTCTGAAGCCGAGGATCGTTTGTCAAGATTAGAAGCTGCACTCTTGAGTAAGAAAGATGTCCATAACGAAGAACATCTGAAAACGATCAGTGAACTCCAGTCGAAGCTAGACAGCGCAAATGAAGCACTAATCGCACAACGGAAAAAGGCAAGAGAGAAATTTGTAGAGAATGAAGAAGAGATTGTGTTAGGAACACAATTAGTTCCATACTGTCCTAACTTCGAGATGGGGAATACAAGTAATGAGCATGTGAACATTGAAGAGCATGAGCATACTATTAACGAAACAGTTGATGAGGAGATTATATGTGAACATCCTGATGATATTATGGGTCAAGAAAATGTAACAACTGAGACTGGACTTAATTGTGACCAACTAGAGGATGACAACGTGCCGCTCAAAACTAAGAGGAGAGAAATATCCAAAGACAGATGGATAAAAGACAATAAAAGATCTGTTCCAAGGACGCGTTCAAGCACGGGTGGAATGAGAACATCACAACAACAAACTGAAAGGAAA ATGGCGGAACCACTTGGCGGAGGCAACCACGATCTCGAGCAGACCTTGAAGCCCTTCTTTCAAAGAGCTTCTGAAGCCGAGGATCGTTTGTCAAGATTAGAAGCTGCACTCTTGAGTAAGAAAGATGTCCATAACGAAGAACATCTGAAAACGATCAGTGAACTCCAGTCGAAGCTAGACAGCGCAAATGAAGCACTAATCGCACAACGGAAAAAGGCAAGAGAGAAATTTGTAGAGAATGAAGAAGAGATTGTGTTAGGAACACAATTAGTTCCATACTGTCCTAACTTCGAGATGGGGAATACAAGTAATGAGCATGTGAACATTGAAGAGCATGAGCATACTATTAACGAAACAGTTGATGAGGAGATTATATGTGAACATCCTGATGATATTATGGGTCAAGAAAATGTAACAACTGAGACTGGACTTAATTGTGACCAACTAGAGGATGACAACGTGCCGCTCAAAACTAAGAGGAGAGAAATATCCAAAGACAGATGGATAAAAGACAATAAAAGATCTGTTCCAAGGACGCGTTCAAGCACGGGTGGAATGAGAACATCACAACAACAAACTGAAAGGAAA MAEPLGGGNHDLEQTLKPFFQRASEAEDRLSRLEAALLSKKDVHNEEHLKTISELQSKLDSANEALIAQRKKAREKFVENEEEIVLGTQLVPYCPNFEMGNTSNEHVNIEEHEHTINETVDEEIICEHPDDIMGQENVTTETGLNCDQLEDDNVPLKTKRREISKDRWIKDNKRSVPRTRSSTGGMRTSQQQTERK Homology
BLAST of Lsi01G018290 vs. ExPASy TrEMBL
Match: A0A6J1HN54 (uncharacterized protein LOC111466136 OS=Cucurbita maxima OX=3661 GN=LOC111466136 PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 9.5e-27 Identity = 68/80 (85.00%), Postives = 73/80 (91.25%), Query Frame = 0
BLAST of Lsi01G018290 vs. ExPASy TrEMBL
Match: A0A6J1EAW7 (uncharacterized protein LOC111432443 OS=Cucurbita moschata OX=3662 GN=LOC111432443 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 2.8e-26 Identity = 67/80 (83.75%), Postives = 73/80 (91.25%), Query Frame = 0
BLAST of Lsi01G018290 vs. ExPASy TrEMBL
Match: A0A1S3CLW0 (uncharacterized protein LOC103502450 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502450 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 3.6e-26 Identity = 68/80 (85.00%), Postives = 71/80 (88.75%), Query Frame = 0
BLAST of Lsi01G018290 vs. ExPASy TrEMBL
Match: A0A1S3CM07 (uncharacterized protein LOC103502450 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502450 PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 6.2e-26 Identity = 66/73 (90.41%), Postives = 69/73 (94.52%), Query Frame = 0
BLAST of Lsi01G018290 vs. ExPASy TrEMBL
Match: A0A6J1DM00 (uncharacterized protein LOC111021288 OS=Momordica charantia OX=3673 GN=LOC111021288 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 1.2e-24 Identity = 66/80 (82.50%), Postives = 70/80 (87.50%), Query Frame = 0
BLAST of Lsi01G018290 vs. NCBI nr
Match: XP_022966502.1 (uncharacterized protein LOC111466136 [Cucurbita maxima] >XP_023518486.1 uncharacterized protein LOC111781969 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 130.2 bits (326), Expect = 2.0e-26 Identity = 68/80 (85.00%), Postives = 73/80 (91.25%), Query Frame = 0
BLAST of Lsi01G018290 vs. NCBI nr
Match: XP_022925102.1 (uncharacterized protein LOC111432443 [Cucurbita moschata]) HSP 1 Score: 128.6 bits (322), Expect = 5.7e-26 Identity = 67/80 (83.75%), Postives = 73/80 (91.25%), Query Frame = 0
BLAST of Lsi01G018290 vs. NCBI nr
Match: KAG6595681.1 (hypothetical protein SDJN03_12234, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 128.6 bits (322), Expect = 5.7e-26 Identity = 67/80 (83.75%), Postives = 73/80 (91.25%), Query Frame = 0
BLAST of Lsi01G018290 vs. NCBI nr
Match: XP_008464609.1 (PREDICTED: uncharacterized protein LOC103502450 isoform X2 [Cucumis melo]) HSP 1 Score: 128.3 bits (321), Expect = 7.5e-26 Identity = 68/80 (85.00%), Postives = 71/80 (88.75%), Query Frame = 0
BLAST of Lsi01G018290 vs. NCBI nr
Match: XP_008464608.1 (PREDICTED: uncharacterized protein LOC103502450 isoform X1 [Cucumis melo]) HSP 1 Score: 127.5 bits (319), Expect = 1.3e-25 Identity = 66/73 (90.41%), Postives = 69/73 (94.52%), Query Frame = 0
BLAST of Lsi01G018290 vs. TAIR 10
Match: AT3G57320.1 (unknown protein; Has 30 Blast hits to 30 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 57.4 bits (137), Expect = 1.5e-08 Identity = 31/73 (42.47%), Postives = 51/73 (69.86%), Query Frame = 0
BLAST of Lsi01G018290 vs. TAIR 10
Match: AT3G57320.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 17 Blast hits to 17 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 52.4 bits (124), Expect = 4.9e-07 Identity = 29/65 (44.62%), Postives = 46/65 (70.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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