![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Lsi01G018240 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATAAAGTACCAAAATGGGTTCAATCCTTTTCTTAAACTCATCTAAATCAAGCTGATATTTTTGCCGATCATCAAACAGGTATCACTCTATTGTTCTTGCTACTCCAACTCAAACCTCAGTCGAAGGGCGATCTCCCATTATCATCCTTCTCTGTTGATTCCACCGCCAAGATTTTGCTTCAACCACTCTGAAAATGGACGCCAAGCCAACCGAAATCAGCTGCTCGAAGATGTTCGGAGGCTACAACCGAAGATACCGCCATTACAGCCCAACTCTTGGCTGTTCCATGACCTTCCACATCTACTTCCCTCCTTCTCCTCCCCCATCGCATAAATTTCCGGTATCTCCTCTCATTTCCTCTTTCAATTCAATCTCGACGATACCCATTTCGATTACAAATTGAAACTTGAATGTTTATGTAATGTTTTGAGTGTTTCTGATCTTCGATTTCTGGAACAATTGGTTTTCTGTTTGATCCTGGGGTTGTCCTGTTCGTATATGTTTATGTGATTTGATTTCACTGCCCTTGGATGTGAGTTTTTGTGGAATAGATGTTGAACAGTTACCGGGTATTTGATTGTTTGTTGGAGTGTTTGTTTTCTTTTTGTGATTGGAAATGTATTGGAATCGTAATGATTGAGGCTTGGGGTTCGATTTTGTTATTGGGCAGGTACTCTACTGGCTCTCTGGCCTTACTTGTTCGGATGAGAATTTTATAATTAAAGCAGGGGCTCAACGCACTGCTTCCAGTGAAGGTGTTGCTTTAATTGCACCTGATACATCTCCAAGTAAGAACAACTTTGGAACTCATTTTCAAGTATTGATGATGTTATTGGGTATAATTTTGATTGGAAAGAACGGAATTTCTTATCCTTATGCTCTCAACTTAACGACTTTGAACACTCTTGGATTCTGCTAATAATTTTTTGAAGTTTTAACGAAGTAAAGATTAACAAATTGTTTTAAGATGTGCTTTTTATGATATCAAGTTGACCCAGCAGGGTTATATGGTTTGAATTATTCTATTGTGAATGTAAAATAGTCATAGCTTCAATGAACTACTGGTTGGAAGGCCATGAAACAATCTGCCATGGTAAATGACTTCCATAATTTATGGGATAAAGAAAAATCTTTTGTTTGAAATAGATGGGATGTCTCACCACGTTTATAAGATGGAGCCTTCGTTTCTTTGTCTTCTTTTCAATAATTTGAAAGCATGTTTATGTCATATCACAACGTATTTATCTTCTTTATAGGAATTTTTATGAGGAACGATATTCAAAACTTGGTAATCAGAGTGAAAGAATTTTCCTGCTGTAATCTTTTTTCCCCCCTTTTACTTAGATTCATTGGTCTGGCAAATGCGTTTAATTCTTACTGTGCTTGATATGTTGATATGAAACTGATCTTATTTCTAACAGTTTTTCAATATGGAAGCGGGTACTTTCTTTTGATGAAATGTGACCTGGATCTTATGTATATATTTTTTGGCTAATTCTTCTAATAGGAGGCCTGAATGTGGAAGGAGAGGCAGACAGTTGGGATTTTGGTGTCGGTATGTTACTTCTGACTGTCATATTGCAGTTAAACAGAATAACTTTGACACAATATTTTGTTGCTCTTCAAATTGAACCAATGTACATTAAAGAACTGGCCCTTACTATTATTGAAATTTTCTCATGTATGGTTTGGCTTTCATTTGACTTTTCAACTTCATAACTTTATTCCTATGGAGTTAAGTGTATGTATAGTCCTATTCCGTATCCTACCTTTAATGTCTTTCACCTCTTGTTCTATATGGCGGTTTAATTTCTCAAAAAAAATGCATTATTGTTTCCACATACAAAGTTATGAATTTAGTTTCATGTTTTCCTTCTCTTTTTCTTGTTTCTTAAAAAGGTGCTGGATTTTATCTCAATGCTACACAAGAGAAATGGAAAAATTGGCGTATGTATGATTATGTTGTCAAGGAGCTACCTAAACTTCTGAGTGAGAATTTTCCACAGCTTGATACATCACGGGCATCTATATTTGGTCACTCTATGGGTGGGCATGGGGCTCTAACAATCTACCTGAAAAACTTGGACAAATATAAGGTATTCGTTGATAATCTCTTATTTAATTTTCTGTTTAAGATTCAGAAAAATGTAAATTACCATTACCATTACAATTACCAAGGTCTTTTCTTTCGGAGAAAAAGGTTATTTTCTTGACGGGATTCTATACGCTCTCCCCACCCCCAAACACTCAGAGAAAAAGAAACAAAATTAGGGATCCTTGTTTACGATTTGCTGCTTCCATCTGATAAATAAACTATTGTTTTTATCATCTTGTATTTAGTTATTTTGCTCCCATAATCATTTTCTACTTAACTTTTCAGTCAGTATCTGCCTTTTCACCCATTGTCAATCCTGTAAACTGTCCTTGGGGCCAGAAGGCATTCACAAATTATCTAGGTAGCAACAAAGCTGACTGGGAGGTGAGTTTTCAGGATATATTTAGCAATTTTTCACTATTTAATGTTAGGATGGAAAAAAATTTAATTATTGAAGCTGAATAACTGCAGGAGTACGATGCTACTCATCTAATCTCAAAGTTTCACGATGTATCAGCTACCATTCTAATTGATCAGGTAATGCTTTTTTGTTCCTTCAACTTTCACAGGGCAGATTGTTTCTTCACGTCAGTGGCATCAACGACATAGAAAACGAAAAAGCTATCATTTGTAGCTTTCTGTGTTAAATCAAAACATTTTTTTCTAAAATTTCAATTTGTTTTGTTCTTGAACTCTTAATACGTTTTTAACTTTTCTTATCTTAACTTTTTGAATTTCACTTATGGTCTCTGAACTCTTAATCGCTTTATTTAAATATTTATTCTTTCAATTTGCATTTAGTCCAGCCATATTAATTATAGACTAGATTACAAAAAGCACTCCTGAACTTTGGTCTTTGCTTGAAAGATACACCTATTCTTTTAAAAATTGTAGTACCTTAGACCTTTCATAAACGTTTCAAAATTGCCCTTGAAGTAGAAATCCAGTTAAATTTGAAACGAAAATTGGAGTGACTGTGACCTGAAAAAGGAAATTGCACCGCCATACTATTTCAATTTGCTACCACACCCATAATAGTTACTAGCGAGGTAACTAAGCTGGTGAAATGAGTCTGTTGTGCACATTGAATTGACATGATGAGGCTTTACTAGTTAACTTCCCTCCTTTACCCTCCTTGTCAATAGACTTGTGAAATGCTGATTTTACCCTTTTTCTGTTGAAACACAAACAGGGGGAGGATGATGAATTCTTACATGGACAGTTGCTGCCACACAAGTTTGAAGAGGCATGCAGGGCTGTGAATGCTCCTCTCCTCTTGAGGCTGCAACCAGGTTACAATCATTCTTACTTTTTCATTGCTACCTTCATTGAAGATCACATCCGTCACCATTCTCAAGCTCTTAGGCTTCCTTAAAACCTTGTGCTGCTTATGATCTACTGTCTCTTATCTAATTTCTATCCTTTGAGAAGTTAAGAAAGGCATGGTGACTATGTAATTTTGGTGAATATGATGTTATTTTCAGTATGTGTACTGGATCTCTGTAATGTGAATGTGAAAACATGTCCTTTGGTGGGTGAACCTTTTGCTATTTGGTTCCTTGCTAGAGAGGTTATAATAGAGTTGGTTTTCGCCTAAAAA AATAAAGTACCAAAATGGGTTCAATCCTTTTCTTAAACTCATCTAAATCAAGCTGATATTTTTGCCGATCATCAAACAGGTATCACTCTATTGTTCTTGCTACTCCAACTCAAACCTCAGTCGAAGGGCGATCTCCCATTATCATCCTTCTCTGTTGATTCCACCGCCAAGATTTTGCTTCAACCACTCTGAAAATGGACGCCAAGCCAACCGAAATCAGCTGCTCGAAGATGTTCGGAGGCTACAACCGAAGATACCGCCATTACAGCCCAACTCTTGGCTGTTCCATGACCTTCCACATCTACTTCCCTCCTTCTCCTCCCCCATCGCATAAATTTCCGGTACTCTACTGGCTCTCTGGCCTTACTTGTTCGGATGAGAATTTTATAATTAAAGCAGGGGCTCAACGCACTGCTTCCAGTGAAGGTGTTGCTTTAATTGCACCTGATACATCTCCAAGAGGCCTGAATGTGGAAGGAGAGGCAGACAGTTGGGATTTTGGTGTCGGTGCTGGATTTTATCTCAATGCTACACAAGAGAAATGGAAAAATTGGCGTATGTATGATTATGTTGTCAAGGAGCTACCTAAACTTCTGAGTGAGAATTTTCCACAGCTTGATACATCACGGGCATCTATATTTGGTCACTCTATGGGTGGGCATGGGGCTCTAACAATCTACCTGAAAAACTTGGACAAATATAAGTCAGTATCTGCCTTTTCACCCATTGTCAATCCTGTAAACTGTCCTTGGGGCCAGAAGGCATTCACAAATTATCTAGGTAGCAACAAAGCTGACTGGGAGGAGTACGATGCTACTCATCTAATCTCAAAGTTTCACGATGTATCAGCTACCATTCTAATTGATCAGGGGGAGGATGATGAATTCTTACATGGACAGTTGCTGCCACACAAGTTTGAAGAGGCATGCAGGGCTGTGAATGCTCCTCTCCTCTTGAGGCTGCAACCAGGTTACAATCATTCTTACTTTTTCATTGCTACCTTCATTGAAGATCACATCCGTCACCATTCTCAAGCTCTTAGGCTTCCTTAAAACCTTGTGCTGCTTATGATCTACTGTCTCTTATCTAATTTCTATCCTTTGAGAAGTTAAGAAAGGCATGGTGACTATGTAATTTTGGTGAATATGATGTTATTTTCAGTATGTGTACTGGATCTCTGTAATGTGAATGTGAAAACATGTCCTTTGGTGGGTGAACCTTTTGCTATTTGGTTCCTTGCTAGAGAGGTTATAATAGAGTTGGTTTTCGCCTAAAAA ATGGACGCCAAGCCAACCGAAATCAGCTGCTCGAAGATGTTCGGAGGCTACAACCGAAGATACCGCCATTACAGCCCAACTCTTGGCTGTTCCATGACCTTCCACATCTACTTCCCTCCTTCTCCTCCCCCATCGCATAAATTTCCGGTACTCTACTGGCTCTCTGGCCTTACTTGTTCGGATGAGAATTTTATAATTAAAGCAGGGGCTCAACGCACTGCTTCCAGTGAAGGTGTTGCTTTAATTGCACCTGATACATCTCCAAGAGGCCTGAATGTGGAAGGAGAGGCAGACAGTTGGGATTTTGGTGTCGGTGCTGGATTTTATCTCAATGCTACACAAGAGAAATGGAAAAATTGGCGTATGTATGATTATGTTGTCAAGGAGCTACCTAAACTTCTGAGTGAGAATTTTCCACAGCTTGATACATCACGGGCATCTATATTTGGTCACTCTATGGGTGGGCATGGGGCTCTAACAATCTACCTGAAAAACTTGGACAAATATAAGTCAGTATCTGCCTTTTCACCCATTGTCAATCCTGTAAACTGTCCTTGGGGCCAGAAGGCATTCACAAATTATCTAGGTAGCAACAAAGCTGACTGGGAGGAGTACGATGCTACTCATCTAATCTCAAAGTTTCACGATGTATCAGCTACCATTCTAATTGATCAGGGGGAGGATGATGAATTCTTACATGGACAGTTGCTGCCACACAAGTTTGAAGAGGCATGCAGGGCTGTGAATGCTCCTCTCCTCTTGAGGCTGCAACCAGGTTACAATCATTCTTACTTTTTCATTGCTACCTTCATTGAAGATCACATCCGTCACCATTCTCAAGCTCTTAGGCTTCCTTAA MDAKPTEISCSKMFGGYNRRYRHYSPTLGCSMTFHIYFPPSPPPSHKFPVLYWLSGLTCSDENFIIKAGAQRTASSEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSENFPQLDTSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFSPIVNPVNCPWGQKAFTNYLGSNKADWEEYDATHLISKFHDVSATILIDQGEDDEFLHGQLLPHKFEEACRAVNAPLLLRLQPGYNHSYFFIATFIEDHIRHHSQALRLP Homology
BLAST of Lsi01G018240 vs. ExPASy Swiss-Prot
Match: Q8LAS8 (S-formylglutathione hydrolase OS=Arabidopsis thaliana OX=3702 GN=SFGH PE=1 SV=2) HSP 1 Score: 490.7 bits (1262), Expect = 1.1e-137 Identity = 227/279 (81.36%), Postives = 253/279 (90.68%), Query Frame = 0
BLAST of Lsi01G018240 vs. ExPASy Swiss-Prot
Match: Q08E20 (S-formylglutathione hydrolase OS=Bos taurus OX=9913 GN=ESD PE=2 SV=1) HSP 1 Score: 344.0 bits (881), Expect = 1.7e-93 Identity = 162/278 (58.27%), Postives = 206/278 (74.10%), Query Frame = 0
BLAST of Lsi01G018240 vs. ExPASy Swiss-Prot
Match: P10768 (S-formylglutathione hydrolase OS=Homo sapiens OX=9606 GN=ESD PE=1 SV=2) HSP 1 Score: 343.2 bits (879), Expect = 2.8e-93 Identity = 161/278 (57.91%), Postives = 206/278 (74.10%), Query Frame = 0
BLAST of Lsi01G018240 vs. ExPASy Swiss-Prot
Match: B0BNE5 (S-formylglutathione hydrolase OS=Rattus norvegicus OX=10116 GN=Esd PE=2 SV=1) HSP 1 Score: 342.4 bits (877), Expect = 4.8e-93 Identity = 163/278 (58.63%), Postives = 203/278 (73.02%), Query Frame = 0
BLAST of Lsi01G018240 vs. ExPASy Swiss-Prot
Match: Q9GJT2 (S-formylglutathione hydrolase OS=Sus scrofa OX=9823 GN=ESD PE=2 SV=1) HSP 1 Score: 340.9 bits (873), Expect = 1.4e-92 Identity = 161/278 (57.91%), Postives = 204/278 (73.38%), Query Frame = 0
BLAST of Lsi01G018240 vs. ExPASy TrEMBL
Match: A0A1S3CLV3 (S-formylglutathione hydrolase OS=Cucumis melo OX=3656 GN=LOC103502447 PE=3 SV=1) HSP 1 Score: 589.7 bits (1519), Expect = 6.4e-165 Identity = 274/285 (96.14%), Postives = 281/285 (98.60%), Query Frame = 0
BLAST of Lsi01G018240 vs. ExPASy TrEMBL
Match: A0A6J1HWD1 (S-formylglutathione hydrolase OS=Cucurbita maxima OX=3661 GN=LOC111467250 PE=3 SV=1) HSP 1 Score: 586.6 bits (1511), Expect = 5.4e-164 Identity = 273/285 (95.79%), Postives = 279/285 (97.89%), Query Frame = 0
BLAST of Lsi01G018240 vs. ExPASy TrEMBL
Match: A0A6J1DI88 (S-formylglutathione hydrolase OS=Momordica charantia OX=3673 GN=LOC111021329 PE=3 SV=1) HSP 1 Score: 586.6 bits (1511), Expect = 5.4e-164 Identity = 273/285 (95.79%), Postives = 279/285 (97.89%), Query Frame = 0
BLAST of Lsi01G018240 vs. ExPASy TrEMBL
Match: A0A6J1EKS3 (S-formylglutathione hydrolase OS=Cucurbita moschata OX=3662 GN=LOC111435555 PE=3 SV=1) HSP 1 Score: 586.6 bits (1511), Expect = 5.4e-164 Identity = 273/285 (95.79%), Postives = 279/285 (97.89%), Query Frame = 0
BLAST of Lsi01G018240 vs. ExPASy TrEMBL
Match: A0A0A0L300 (S-formylglutathione hydrolase OS=Cucumis sativus OX=3659 GN=Csa_4G337870 PE=3 SV=1) HSP 1 Score: 585.5 bits (1508), Expect = 1.2e-163 Identity = 273/285 (95.79%), Postives = 280/285 (98.25%), Query Frame = 0
BLAST of Lsi01G018240 vs. NCBI nr
Match: XP_038880980.1 (S-formylglutathione hydrolase [Benincasa hispida]) HSP 1 Score: 598.2 bits (1541), Expect = 3.7e-167 Identity = 280/285 (98.25%), Postives = 282/285 (98.95%), Query Frame = 0
BLAST of Lsi01G018240 vs. NCBI nr
Match: XP_008464603.1 (PREDICTED: S-formylglutathione hydrolase [Cucumis melo]) HSP 1 Score: 589.7 bits (1519), Expect = 1.3e-164 Identity = 274/285 (96.14%), Postives = 281/285 (98.60%), Query Frame = 0
BLAST of Lsi01G018240 vs. NCBI nr
Match: XP_022928737.1 (S-formylglutathione hydrolase [Cucurbita moschata] >XP_022967873.1 S-formylglutathione hydrolase [Cucurbita maxima] >KAG6603194.1 S-formylglutathione hydrolase, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033503.1 S-formylglutathione hydrolase [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 586.6 bits (1511), Expect = 1.1e-163 Identity = 273/285 (95.79%), Postives = 279/285 (97.89%), Query Frame = 0
BLAST of Lsi01G018240 vs. NCBI nr
Match: XP_022153930.1 (S-formylglutathione hydrolase [Momordica charantia]) HSP 1 Score: 586.6 bits (1511), Expect = 1.1e-163 Identity = 273/285 (95.79%), Postives = 279/285 (97.89%), Query Frame = 0
BLAST of Lsi01G018240 vs. NCBI nr
Match: XP_004142663.1 (S-formylglutathione hydrolase [Cucumis sativus] >KGN54481.1 hypothetical protein Csa_012604 [Cucumis sativus]) HSP 1 Score: 585.5 bits (1508), Expect = 2.5e-163 Identity = 273/285 (95.79%), Postives = 280/285 (98.25%), Query Frame = 0
BLAST of Lsi01G018240 vs. TAIR 10
Match: AT2G41530.1 (S-formylglutathione hydrolase ) HSP 1 Score: 490.7 bits (1262), Expect = 7.8e-139 Identity = 227/279 (81.36%), Postives = 253/279 (90.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|