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Lsi01G018120 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTAGACTAAAATGATATTTCAATTAGTTTATTGGTATAAGAAAACAAGAAATAGAATTTGCATAGCAGTCCTATATTATTTTGATATGATAATTTGACCCAATTGACTTCTCTTTCAATTCAACTATTTCAATCTTCTGTAAAACGTGGAGGCGATCCAGATTCTTCCAAAGTTTAATCCTCTAAAACCCCTGCTTCATTCATCAAATTCAATCCGATCTTACATCCATCTTGTAGAATTTTCGCGATTTTGTTGTTTATACTTCTTACCCATTTCTTCTTCTAAGCTTGCTCCGATCTGAAATGGCGGCGACGGCGTCTCAGTTTTCGTGTTTGTTCACCATCAACCGTGGTTTTCGCCTTCAACAGCGTCGCTCATTCTTAGCCCCTCGTCCTTCTCTTTCCTTCCCTAAGGTTTGTGTTTCCTTTCGGTATTCTCGTTTCTTATTTCTTTTGGCAACTCTATGAACCGGAAATTTGAAAAAATTGTTGTGAATTTCGATTAATTGAGAGGATGTTTCGCATTATGAATCAGCGATGAAAACCCTTTTTCTGATAGCTTTGAATTTGATTTATAATCAATTCATGGTCGGATAGTTAATATTAAATTCGATATATTTTACCCCTTAGTTTGAATATCTTAATTTGGACATACGTTTTGCTCGGTTGCTTGAATGATTTTAAGTTTCAACTTGCTTGTTTAATGCTATATTCTTGCTGCTGGTTGAATTTTTATGCTTCTCTGCTAGAGTTTGGTTTTCGCTTTGTTCACTTGTTAGAGTTTTCATAGATACTTCATTTGTATATTTTTTAGAACTTAGATCGAACTTCTAATTGACAAGAGATATGGGAGTTCCCATTTGATTTTAAAGTTTTGAAATGGTGGTTTCTTGAAAGTGCTTAATTCTTGTTCTGTGTCTATGTAATGGCGTAAGCGAATGGTGCTTAACACATCGGTATCAAGTGGCATAATCGGTTGCGCTGACACTTGAATTTTCCTTTTTTAGTTCTCCATTGTTACGCGCCTCGAAGGATCTGCTTCAAATACTGCTGATTCCCAGAATAAGACAACTTTAAGCTACGCCACTGATGCATCAGAATCTCAGGTTGCTACAAATTCATATCCGGGTGTTGAAGAGTCATCTGATGTTGGAAATTTAGAGAATGAGAAGCTGCAGGAACCTGATGATGTTGGCACTGTGCCGAAACGAACAGCAAAAATTCATGATTTCTGTTTTGGCATTCCTTTCGGTGAGTTTTGCGTTCTTTCCTTATTGATAGGCCTGTCAGCTTCTAGTAGCAGTTAGAATGCAACATTATTGCTTGAATTGTGTTGGGGTCTTGGTCTTTCACTTGAGAAGGAGAAGAAGTGCTTCCGCTCCTCCTAGTATTGTTTCTCATGAATGTAGCCCAAATGCATTACATTGAATATTGATTTATTGTGTTAGATGTAGCTGCTAAGCATACTGTAACCAGATTACAGCCTAACTCGCTTCACTTTGCAATCACTTATTTATTTATTTTTTTAAAATAAGAAATGAGTAGTATTTCTAAAAACACATTCATTCAGTTTGAAACGTGAATGGTTGGTTTGATTGCCAAGTGACTTGACCAAGTGGTTTTAGAATGACTGAGATCAAGATGGCATGAGTCATAAGGTTAAATTTCAAAAAATATTCTGGTAAACAGTAATCTCTAAGGAACTCATTTAAAGGGGTTGAATGCAACAAAAATTTTGAAACACAGATAAAATGGTGAGGAATTGTAATTTCAATTCTTCAGTACCCATTTCCTGTTTTCTCATTCAGAATAAATTTAAGAAAGAAAACTTCTTCCTCAATGGTATTGGAAGAAAATTTGACTCAGTATGGCTTACTCTGTCTGGTAGGCATGGGCCTTGAAGGAGAAAACTAAATGCCATTTGCCAAACTGTCAATTAGATATGTTCTCCACTTAACAACGTTTTGAAAGCTGTATCTTTTTGTTTTTCTTTTCACCTTGCCATGAAGCTGCTGGGTGTTAGTGAACTTATTGGCTTATGACTATGCTTCAAAGTGAAAGTTTACTGGAGGGAGGAGTAGAAATGGAAATGTAGCATCTAAGGTTAGTATAGAGTCTATAGACTGCACACATATATTGCAGGTGTGATGTAATCATGACGTGTGAGAGATTTTGTGAGAGGTCATGTTGGGACGAGAAGTTGGCTGTCTCGAATGGCCCTAAATAGTTATTTTTCTTGTTTGATGCTTTGGTTATTTCTTGCTTAGTAGACATTTTTTAACCAGTACTGATACACAACAGATTGCCTTCTAAACTCTCTTTATGATACTGGACAATTTGATAATTTCTTTCTTATATTGTTTTTCAAGTTTAAGAGACTAGATGCCATTCTGTTCTGTTTCGATGAAATGTAGATAAATATGCATGACTTTAAATGTGTTTTCTCTTTTGTTTTCTATGGGATTATATTGAATTAGAGGGTTGGTTTTAAACAAGGAAAAATGGTTGAAGTTCAGAAAGTTTTCTTCCTATGTAATACCTTCAACTTTGAAAGTATACAAACTAGAGATGCTGTGTTCTTCCCCCACTAAAGTTTGATTATGAATTGGTAATAGGTGGAGTTGTTCTAAGTGGTGGCCTTGTTAGCTTCATATTCTCAAGAAATCCATCTGCTTTGAGCAGTTTGATCTCTGGAGGTGCTTTGCTGGCCTTGAGCACCATAAGTTTGAAAATCTGGAGGCAGGGAAAGTCCAGTTTGCCATTCATTCTAGGACAAGCAGGTAATTGATTTTGTCTCTTTTAAGTCAGCTGCATCTCCCTCCAAATGTACTTCAGGCATGCAATATAACGTGTATTAATTAGGTCTTATCCCCCTCAGAAAAAAAGAAATCGGGTCTTATTATTTTGAATTGGAGGCATTTTTGTACAGTTAGTTGTTTGGTCTCTCTAGGTGGGCTATCTTTTCATATGCGCCTGTTTCATTTGATCTCAATGAAAGTTCTGTCTTTTAAGCCAAACCGAGCATAGCTGAACTGGTATATGAGTGTGTTAGTAACCATGAGGTTTGTGGTTTGAATCTTCCTACCTCCAATTGTATTAAAAAGAAAGTTTTGTCTTTTAAAAGGACAAAATAAAAGGAATATATTCATATAAAACGTTTTAATTGCTTGAAACACGAAGTTATGCCTAAGTTCTTTATTTGACTGTATTCTTTGCAGTATTTACGGCCTCGTTTTTCTGGAGTAGTTTTCAGACGTACTCATTGGTATGTTACTCATCTATATAAATATTTGACCTGAATCAGCAGATATCAATGCCATAATGTAGTGATTATACTATTTTCGTGATTGTAGACCAAAAACGTGTTTCCAACAGCCTTTTATGCTGCCCTTAGGTAAACTTTATAATTTATTTATTTATTATTTTTTTAAAATATAGTTCTGACTTCCTTATCTTCCTTTGCTAAGTATACTTCAGATTAATCAAATCCTCCAACGCAAATATGTTTTGGTTTTGTTTCCTCACAGTGCTGCAATGCTCTGCTTCTACTTATATGTGGTAATTTCTGGGGGAAACCCGCCACCGAAAAAATTGAAGCCTTCTCCATCTGCTGCTTAATGAATTCAAATCTTACAGAGTTTGATTACATTTTAGAAAAAGAATTTACTTTGTGATGTAGCATGCTGAGTTAAGTTAGGAGGGGAAAAAAGGTCTTATTTTCTTTTGTTGGGATGGTAAAATACTAAATGAAGCTTAGGAGGTGGGAAAAATGTACTTGAGTACTCATCATCTGTGAGGAGCTAGGTGTAGAATCCATGAAGAGTATGTTACTTGAAGGCAATGGGTGCTTGGATTTTGCTTTTGAACACAATGGCTATGAGCTATGTATTTATGCAATCTGTAGAAATAAATTGCTAGTAGTTGAGTGTTTTTCATTGGGGCAAACTAGCCTTTAATAAATAGTTGAAGATAGTCATTGCCATTAGATTAGGGGATTATTAGAAGACTTCTGTAATGGTGAATCTTTGAAGGTACAAAACCTAGCCAGATTTGGTTTATCCCATTGAACTTCAATACACCCAAAAACATTAATTCATCTGTATGGAGGTTTGCAAATATGCTGTCAACACAAGCTGGTGGAGAGAGGCTGTTTAAAAAGCCTCAACAAGCCAAGGAGGAGACAGAAACCATAGTTGATTTCAGGTCAAATTAAAAGTTCTTTCTCAATTTTCATGTTTAAAAAGTGAACTTTTTAAGTTTGTGATTATTTGATCTTTGAAAAGTGTGTAATAAGTTTAAGCGTTCAAATTCTTGTTTAATGGGTATCTAGAATTTTAAATTTATGTTTAATAAATTCTTGATCTATTCAACGTTCTATAAAATATATGGACTTGCTAGATAGATTCTATG ATTTAGACTAAAATGATATTTCAATTAGTTTATTGGTATAAGAAAACAAGAAATAGAATTTGCATAGCAGTCCTATATTATTTTGATATGATAATTTGACCCAATTGACTTCTCTTTCAATTCAACTATTTCAATCTTCTGTAAAACGTGGAGGCGATCCAGATTCTTCCAAAGTTTAATCCTCTAAAACCCCTGCTTCATTCATCAAATTCAATCCGATCTTACATCCATCTTGTAGAATTTTCGCGATTTTGTTGTTTATACTTCTTACCCATTTCTTCTTCTAAGCTTGCTCCGATCTGAAATGGCGGCGACGGCGTCTCAGTTTTCGTGTTTGTTCACCATCAACCGTGGTTTTCGCCTTCAACAGCGTCGCTCATTCTTAGCCCCTCGTCCTTCTCTTTCCTTCCCTAAGTTCTCCATTGTTACGCGCCTCGAAGGATCTGCTTCAAATACTGCTGATTCCCAGAATAAGACAACTTTAAGCTACGCCACTGATGCATCAGAATCTCAGGTTGCTACAAATTCATATCCGGGTGTTGAAGAGTCATCTGATGTTGGAAATTTAGAGAATGAGAAGCTGCAGGAACCTGATGATGTTGGCACTGTGCCGAAACGAACAGCAAAAATTCATGATTTCTGTTTTGGCATTCCTTTCGGTGGAGTTGTTCTAAGTGGTGGCCTTGTTAGCTTCATATTCTCAAGAAATCCATCTGCTTTGAGCAGTTTGATCTCTGGAGGTGCTTTGCTGGCCTTGAGCACCATAAGTTTGAAAATCTGGAGGCAGGGAAAGTCCAGTTTGCCATTCATTCTAGGACAAGCAGTATTTACGGCCTCGTTTTTCTGGAGTAGTTTTCAGACGTACTCATTGACCAAAAACGTGTTTCCAACAGCCTTTTATGCTGCCCTTAGTGCTGCAATGCTCTGCTTCTACTTATATGTGGTAATTTCTGGGGGAAACCCGCCACCGAAAAAATTGAAGCCTTCTCCATCTGCTGCTTAATGAATTCAAATCTTACAGAGTTTGATTACATTTTAGAAAAAGAATTTACTTTGTGATGTAGCATGCTGAGTTAAGTTAGGAGGGGAAAAAAGGTCTTATTTTCTTTTGTTGGGATGGTAAAATACTAAATGAAGCTTAGGAGGTGGGAAAAATGTACTTGAGTACTCATCATCTGTGAGGAGCTAGGTGTAGAATCCATGAAGAGTATGTTACTTGAAGGCAATGGGTGCTTGGATTTTGCTTTTGAACACAATGGCTATGAGCTATGTATTTATGCAATCTGTAGAAATAAATTGCTAGTAGTTGAGTGTTTTTCATTGGGGCAAACTAGCCTTTAATAAATAGTTGAAGATAGTCATTGCCATTAGATTAGGGGATTATTAGAAGACTTCTGTAATGGTGAATCTTTGAAGGTACAAAACCTAGCCAGATTTGGTTTATCCCATTGAACTTCAATACACCCAAAAACATTAATTCATCTGTATGGAGGTTTGCAAATATGCTGTCAACACAAGCTGGTGGAGAGAGGCTGTTTAAAAAGCCTCAACAAGCCAAGGAGGAGACAGAAACCATAGTTGATTTCAGGTCAAATTAAAAGTTCTTTCTCAATTTTCATGTTTAAAAAGTGAACTTTTTAAGTTTGTGATTATTTGATCTTTGAAAAGTGTGTAATAAGTTTAAGCGTTCAAATTCTTGTTTAATGGGTATCTAGAATTTTAAATTTATGTTTAATAAATTCTTGATCTATTCAACGTTCTATAAAATATATGGACTTGCTAGATAGATTCTATG ATGGCGGCGACGGCGTCTCAGTTTTCGTGTTTGTTCACCATCAACCGTGGTTTTCGCCTTCAACAGCGTCGCTCATTCTTAGCCCCTCGTCCTTCTCTTTCCTTCCCTAAGTTCTCCATTGTTACGCGCCTCGAAGGATCTGCTTCAAATACTGCTGATTCCCAGAATAAGACAACTTTAAGCTACGCCACTGATGCATCAGAATCTCAGGTTGCTACAAATTCATATCCGGGTGTTGAAGAGTCATCTGATGTTGGAAATTTAGAGAATGAGAAGCTGCAGGAACCTGATGATGTTGGCACTGTGCCGAAACGAACAGCAAAAATTCATGATTTCTGTTTTGGCATTCCTTTCGGTGGAGTTGTTCTAAGTGGTGGCCTTGTTAGCTTCATATTCTCAAGAAATCCATCTGCTTTGAGCAGTTTGATCTCTGGAGGTGCTTTGCTGGCCTTGAGCACCATAAGTTTGAAAATCTGGAGGCAGGGAAAGTCCAGTTTGCCATTCATTCTAGGACAAGCAGTATTTACGGCCTCGTTTTTCTGGAGTAGTTTTCAGACGTACTCATTGACCAAAAACGTGTTTCCAACAGCCTTTTATGCTGCCCTTAGTGCTGCAATGCTCTGCTTCTACTTATATGTGGTAATTTCTGGGGGAAACCCGCCACCGAAAAAATTGAAGCCTTCTCCATCTGCTGCTTAA MAATASQFSCLFTINRGFRLQQRRSFLAPRPSLSFPKFSIVTRLEGSASNTADSQNKTTLSYATDASESQVATNSYPGVEESSDVGNLENEKLQEPDDVGTVPKRTAKIHDFCFGIPFGGVVLSGGLVSFIFSRNPSALSSLISGGALLALSTISLKIWRQGKSSLPFILGQAVFTASFFWSSFQTYSLTKNVFPTAFYAALSAAMLCFYLYVVISGGNPPPKKLKPSPSAA Homology
BLAST of Lsi01G018120 vs. ExPASy Swiss-Prot
Match: Q93V66 (Protein FATTY ACID EXPORT 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FAX1 PE=1 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 1.7e-51 Identity = 117/232 (50.43%), Postives = 152/232 (65.52%), Query Frame = 0
BLAST of Lsi01G018120 vs. ExPASy Swiss-Prot
Match: Q9C6T7 (Protein FATTY ACID EXPORT 5 OS=Arabidopsis thaliana OX=3702 GN=FAX5 PE=3 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 2.2e-11 Identity = 41/117 (35.04%), Postives = 68/117 (58.12%), Query Frame = 0
BLAST of Lsi01G018120 vs. ExPASy Swiss-Prot
Match: Q9LJU6 (Protein FATTY ACID EXPORT 6 OS=Arabidopsis thaliana OX=3702 GN=FAX6 PE=3 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 4.9e-11 Identity = 41/117 (35.04%), Postives = 65/117 (55.56%), Query Frame = 0
BLAST of Lsi01G018120 vs. ExPASy Swiss-Prot
Match: Q9ZVH7 (Protein FATTY ACID EXPORT 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FAX3 PE=2 SV=2) HSP 1 Score: 65.9 bits (159), Expect = 7.1e-10 Identity = 42/113 (37.17%), Postives = 62/113 (54.87%), Query Frame = 0
BLAST of Lsi01G018120 vs. ExPASy TrEMBL
Match: A0A1S3CM01 (protein FATTY ACID EXPORT 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502437 PE=3 SV=1) HSP 1 Score: 394.4 bits (1012), Expect = 3.2e-106 Identity = 204/232 (87.93%), Postives = 212/232 (91.38%), Query Frame = 0
BLAST of Lsi01G018120 vs. ExPASy TrEMBL
Match: A0A6J1DKJ1 (protein FATTY ACID EXPORT 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111021328 PE=3 SV=1) HSP 1 Score: 382.9 bits (982), Expect = 9.7e-103 Identity = 201/234 (85.90%), Postives = 212/234 (90.60%), Query Frame = 0
BLAST of Lsi01G018120 vs. ExPASy TrEMBL
Match: A0A6J1EPM7 (protein FATTY ACID EXPORT 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111435489 PE=3 SV=1) HSP 1 Score: 371.7 bits (953), Expect = 2.2e-99 Identity = 198/234 (84.62%), Postives = 211/234 (90.17%), Query Frame = 0
BLAST of Lsi01G018120 vs. ExPASy TrEMBL
Match: A0A6J1HS27 (protein FATTY ACID EXPORT 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467271 PE=3 SV=1) HSP 1 Score: 371.3 bits (952), Expect = 2.9e-99 Identity = 198/234 (84.62%), Postives = 210/234 (89.74%), Query Frame = 0
BLAST of Lsi01G018120 vs. ExPASy TrEMBL
Match: A0A5N6RGW4 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_016767 PE=3 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 1.1e-61 Identity = 141/235 (60.00%), Postives = 170/235 (72.34%), Query Frame = 0
BLAST of Lsi01G018120 vs. NCBI nr
Match: XP_038883061.1 (protein FATTY ACID EXPORT 1, chloroplastic [Benincasa hispida]) HSP 1 Score: 415.6 bits (1067), Expect = 2.8e-112 Identity = 215/232 (92.67%), Postives = 221/232 (95.26%), Query Frame = 0
BLAST of Lsi01G018120 vs. NCBI nr
Match: XP_008464592.1 (PREDICTED: protein FATTY ACID EXPORT 1, chloroplastic [Cucumis melo]) HSP 1 Score: 394.4 bits (1012), Expect = 6.6e-106 Identity = 204/232 (87.93%), Postives = 212/232 (91.38%), Query Frame = 0
BLAST of Lsi01G018120 vs. NCBI nr
Match: XP_011653763.1 (protein FATTY ACID EXPORT 1, chloroplastic [Cucumis sativus]) HSP 1 Score: 389.0 bits (998), Expect = 2.8e-104 Identity = 200/232 (86.21%), Postives = 211/232 (90.95%), Query Frame = 0
BLAST of Lsi01G018120 vs. NCBI nr
Match: XP_022153929.1 (protein FATTY ACID EXPORT 1, chloroplastic [Momordica charantia]) HSP 1 Score: 382.9 bits (982), Expect = 2.0e-102 Identity = 201/234 (85.90%), Postives = 212/234 (90.60%), Query Frame = 0
BLAST of Lsi01G018120 vs. NCBI nr
Match: XP_023544351.1 (protein FATTY ACID EXPORT 1, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 376.7 bits (966), Expect = 1.4e-100 Identity = 202/234 (86.32%), Postives = 212/234 (90.60%), Query Frame = 0
BLAST of Lsi01G018120 vs. TAIR 10
Match: AT3G57280.1 (Transmembrane proteins 14C ) HSP 1 Score: 204.1 bits (518), Expect = 1.2e-52 Identity = 117/232 (50.43%), Postives = 152/232 (65.52%), Query Frame = 0
BLAST of Lsi01G018120 vs. TAIR 10
Match: AT1G50740.1 (Transmembrane proteins 14C ) HSP 1 Score: 70.9 bits (172), Expect = 1.6e-12 Identity = 41/117 (35.04%), Postives = 68/117 (58.12%), Query Frame = 0
BLAST of Lsi01G018120 vs. TAIR 10
Match: AT3G20510.1 (Transmembrane proteins 14C ) HSP 1 Score: 69.7 bits (169), Expect = 3.5e-12 Identity = 41/117 (35.04%), Postives = 65/117 (55.56%), Query Frame = 0
BLAST of Lsi01G018120 vs. TAIR 10
Match: AT2G38550.1 (Transmembrane proteins 14C ) HSP 1 Score: 65.9 bits (159), Expect = 5.0e-11 Identity = 42/113 (37.17%), Postives = 62/113 (54.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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