Lsi01G017990 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi01G017990
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationchr01: 17687426 .. 17692534 (-)
RNA-Seq ExpressionLsi01G017990
SyntenyLsi01G017990
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTACTAGTAATTTTACCGTAAGATTTTTTTTAAAAAAAAAAAAATTAGACTTTTAGAAGAAAAATATTTATTGGGAAATTCTATTTCAGATCTTCACTAACTTCAAATCTAATTTGTAAAATTTTAATGAACAAGAAGTTTACTGTAAAATTTCATGGGAAGAATCTTTACGGTAACTTTTTTTTTAATAATTTTATAATTTTAAGTTGTTAGGATTTTACCAAAAAATAAAAATTTATGGTAGGTTTTTATTTTTTTCAAATTCTAATTTGTAAAAAAAATAAAATAAAAAAGAAGTAAATTTTCATAGGAAGAATCTTTACAAGAAATTTTACACTAACCTTTCTTTCAAATAATTTTTTAATTTTAAGTTTGTTAGGATTTTACCAAGAAATAAAATTTTCTGGTACGTTTTTATTTTTTTTCAAAGTCTAATTTATAAAAAAAAATGAAAAAGAAGCTTACCATAAAATTTCATAGGAAGAATCTTTACGAGAAATTTTATAGTAACCTTTCTTTTAAATAATTTTATAATTTTAAGTTAGTTAGGATTTTACCTAGAAATAAAATTTAATTTACTGGTAGATTTTTATTTTTTGAAACTCTAATTTGTAAAAAAAAAATGAAAAAGAAGCTTATTGTAAAATTTCATGGGAAGAATCTTTACTAGAAATTTTATGGTAACCTTTTTTAATTTTATTTAAAAAATTAGATTTTAAGTTAGTTGTGATGTTACAAATAGAATTTCTGGGTAGGTTTTTATTTTTTTCAAAGTCTAATTTGTAAAAAAAAATGAAAAAGAAGCTTACTATAAAATTTACTGGCAAGAATTTTTACAGAAAATTTTACAGTAAACTTTTTTGCAGTTTAATTTTCACAAATTAGATTTTTAAGTTAGTTAGGATCTTACTAAGAAAAAAGAAATTTTTGGTAAGTTTTTTTAAAAGAAAAAAGTATATTTGTAAAAAAAAAAAAAAAAAATTACCACGAAATTTTACAATAAATTTATTTTTTAGAATAAAAAAAATTTACAAATTAGATTTTAAATTAGTTAGGATCTTGTCATGAAATAGACTTTTTGGTAAGTTTTTGTTTTTTTTTTTTTGTTTTAAATCTAATTTGTATACAAAATTTCATGGTAAGTCAATTAGTTAGCTTAAGTTAACCAATTTCAATTTGGTGAGTTAGAATTATTTTCTTGTAAAGGAAAATTTTCAATTACGTAAAATTCAAACAAAAATTTTTTCTCAAATTTTTACTTTTAACACTAAAAACAAATTAGAATACTGGATAAATTGTAGTTAAGTATGAAAAATTGTATTAAGTAAAGATTTAGGAGTAATTGATTGAAGGACAAAATAGTACTTTTATTACGTAGAAAAGATAAAAAGAGATTAAAAAAAGAAGTTTTAAAAAAGAGATTAGTTTTGTCCGCCCAAAACTATCAAAACTATTTTAGGTTAGAAATAACTATTTCCAACCAAAAACCATAGTCGAACTACTGCTCTGCGACGGGTGTGATTAAACTATTCAACGTGCTCCCCATTCCTCGCCGGTAGAGGATCGTTCTCAGTAGGCTGTATCCCGCTCTGGGATGGTCGCGTGGCGGTCTGAAAGACTCCCAAACAATTTTCTTCTTCTTCGTTTCTATCGTTTTTTATTCAAAGAAATCAAAGATAAGCGTCTCTGTTCTCTGCCTTTGCTCTGTTCTCATCATTTTCATCATACACCATTCCCTTCCATTCCCATGTCCTCCCACGTTATATCTTCTCCTCCAACCCTCTTAAATTCCTTTCTTTACTCTCTCCCCATTATCTGAGAACCATTCACTTCTCACAACCCTTTCTTATACAAACCCCTTCTCTTCTTTTACAATCATGCAATGACCTTCCTCGTCTGAAGCAAATCCATGCCCATCTCATTCTCTCATCTGGGTTCGACACCGTCTCAATTGCCTCCAAGCTCATTCGCCTCTACGCCAAGTTCAATGACTTTCCCAGTGCCGTCTCTGTTCTCAACGTTTTTCCTGACCCGGAACCCATGCTTTGGAACTCCATCATCAAGTCCCACTTTGACTCGGGTTTGTTCCTTTCTGCCCTTTTGTTGTATAAAAGCATGAGGGAGGTGGGAGTTGAGCATGATGGTTTCACGTTTCCGATCGTTAATCATGTCATTATGTCAATTTGGGTTGATGTAGTCTATGCGGGAATGGCCCATTGTGTTGGAATTCGAATGGGGTTTAGTGCTGATTTGTATTTCTGTAATACCATGATGCAGGTTTATGGGAAATGTGAGTGTTTGGTTTATGCTCGTAATGTGTTTGATGAAATGCCTAACAGAGACTTGGTTTCTTGGACCTCGATGATTTCGGCGTATGTTAATGGTGGTGATGTTGTTTCTGCTTTGGATCTTTTTGAGGGAATGAGGAGGGAGTTGGAGCCGAACTCGGTGACAGTAATGGTCATGTTGCAAGCTTGTTGTGCGACTCAAAATTTGGTTCTGGGAAGGCTGCTTCAATGTCATGTAGTTAAGAGTGGTTTATTGTTTGATACAGGTCTGCAGAATTCGTTCTTGCAAATGTATAGTCGACTGGGAGAGGAGGATGAAGTTGGAATTTTTTTCTCTGAAATTCATTGCAAGAATGTGGTTTCTTGGAATATTTTGATGTCTTTTTATTCCTCCATGGGGGATATTTTGAAAGTTGTAGATACCTTCAACAAAATCATGGGTGAAGTTCCACTCAGCATTGAGACATTAACCATACTTATATCAGCAACTGCGACATCTGATTCCGGGTGTCTGATCCTAGGTGAAAATCTACATTCCTTGGCAATTAAAAGTGGCCTTTATGATGGAATTCTGCGGACTTCTTTGTTGGATATGTATGCCAAGTTTGGGGAGTTGGAAAATTCAACTAGGTTGTTTAAGGGAATCCCAAATAGGAGCATCATTACTTGGGGGGCCATGATGTCTAGTTTTATTCAGAATGGTCATTTTGATGATGCAGTTGAGATCTTCAAGCAAATGCAAACTGCTGGCTTGAAACCCAGTGTTGGAATTATTAAACACTTAATTGATGCTTACGCCTATTTGGGTGCTCTGCAGTTGGGGAAAGCAATACATTGTTACCTCATCCGAATCTATGGATTGGAGATATGTAATACACACTTAGAAACATCTCTCCTAAACATGTATGGAAGATGTGGAAGCGTTGCTTCTGCTAGAAAATGTTTTGACTTGATCTTAATCAAAGATGTTGTGGCGTGGACTTCCATGATTGACGTATATGGTGCTCATGGATTAGGTATTGATGCCCTCAATCTGTTCCGTCAGATGATGAGTGAAGAAGTGGCCCCAAATAATGTCACGTTCTTAAGTTTGTTATCTGCCTGTAGCCACTCTGGCCTTGTAAGTGAGGGCTGTGAAATCTTTTATTCAATGAGATCAAGGTTCCATATTAAGCCTAATTTAGAGCACTACACTTGTTTTGTTGATCTTTTGAGTAGATCAACAAGAGTAAGAGAGGCCTTTGCAATTACATTGAGAATGACAAATCTCTGTGATGGCAGGATTTGGGGTGCTCTTATGGGCGCCTGCCGGGTGTATGGAGACAATAAAATCGCTAACTATGCTGCAGACAGGCTTCTTGAATTAGAACCTGACAATGTAGGCTATTATACTTTGTTGAGCAATTCACAGGCCAGTGTTGGGCAGTGGCATGAAGTTGAAAAATTACGTAGTGTTGTGTATGAGAAAGACCTTGTCAAGAAACCAGGTTGGAGCTTCATTGAGTTAAATGGAACAATTCATGGGTTTGTTTCAGGAGATAGATCACACAACAAGACCAATGAGATTTATGATTTATTGGTATATATTAATAGGATAAAATAGGACAGGGATTCTGTTTATCTAAGCTACAATAAGGGTGTCTGATTAAACCTGGAATTCTTTTTGGCATCTTCACTGTGCCATATGAAAGATGGGAATATTGGTTAACCTGCCACATAACAATATAGCATTTGATGAGATCGTTTGAAGTGATTGAAGGACTAGTTTGAAGTTTGAAGCATGAACATATTAAAGGGAGAAGTCTAATTAGTCATTATGCCTGATGGTATGGTAATACTTTTCATCCTCTCTAAATTTCAGCTTACGCTCATTGCTGTTTCACTATTCTCTAGTAATGTGAATCGTTTAGACTTACAAATGATATATCAGTTCTCATGCACAAAATCATGAATCTGTTGAATGCCCCTTTCCCCCTAGACTAATCTTACAAGCTTCGTGTTCCTGGTAGTATCTATGCTATGCAAATGATTAGAGAAATTTTTTTAATTGTAGAAGTGAAAAGAAAACCATGTTTAGTAGACAGAAAGGATCCCTCACAAATCAAAACATATGGTTATCTGGAGAATGGCCTGCCGCATTATGGTGCCATCTCTCTGCTTGGCAGCTAAACATTCCACTCTAAATAAACTACCATGGATTGACCTGATAATCATTGCAACAAGTGAAAAAATGTATAAGCGACTTTGGGAGAATGAATTCAAATTTAATTGTACCTACCTACCTAAGGTACTAATATCTTACAAGTTTCTAAGCAACTAGATGTTGTATGGTCGAATGGTTAACCTGTAAGATTGGTCAAGTACTTTTGAGCTTACTCAAATGCTGACAAATATATGAGTATATTACTGCTAATCTGTTACTGATTGTTGATTTTGTTTCTTCAGGCGATGGAGCTTATATCTAGCACAGCTCTGAAGTTCGGTTTTGGGCATAGAGCAAATAGTATAAGGTTCTTGGCCTTGAGGCATAGCTTAGGAAGAAACTGGGTCAGGCAGAGCTGAGGTATCCCTACATTTACTTTTCTTGGGGGAGGGGATATGTTTGACTGAATTGTCCATTTCACTTAGGTTGGAGATCTTGATCTGTTTGTAGAACATGTAGACAGTACATATTTCAAATCTAACCTTTTCAGCCAAGCATATCAAATCCTCCTAGGTTATCTTGTTCAACTTTGTAGCTCATCCATCTTCCTCAAAACATCACCATTGTCCTCAAACACCTCAGCGAAGATCTGTAGTCCAAGTATTAGACTTTAG

mRNA sequence

ATGCTTACTAGTAATTTTACCCAAATCCATGCCCATCTCATTCTCTCATCTGGGTTCGACACCGTCTCAATTGCCTCCAAGCTCATTCGCCTCTACGCCAAGTTCAATGACTTTCCCAGTGCCGTCTCTGTTCTCAACGTTTTTCCTGACCCGGAACCCATGCTTTGGAACTCCATCATCAAGTCCCACTTTGACTCGGGTTTGTTCCTTTCTGCCCTTTTGTTGTATAAAAGCATGAGGGAGGTGGGAGTTGAGCATGATGGTTTCACGTTTCCGATCGTTAATCATGTCATTATGTCAATTTGGGTTGATGTAGTCTATGCGGGAATGGCCCATTGTGTTGGAATTCGAATGGGGTTTAGTGCTGATTTGTATTTCTGTAATACCATGATGCAGGTTTATGGGAAATGTGAGTGTTTGGTTTATGCTCGTAATGTGTTTGATGAAATGCCTAACAGAGACTTGGTTTCTTGGACCTCGATGATTTCGGCGTATGTTAATGGTGGTGATGTTGTTTCTGCTTTGGATCTTTTTGAGGGAATGAGGAGGGAGTTGGAGCCGAACTCGGTGACAGTAATGGTCATGTTGCAAGCTTGTTGTGCGACTCAAAATTTGGTTCTGGGAAGGCTGCTTCAATGTCATGTAGTTAAGAGTGGTTTATTGTTTGATACAGGTCTGCAGAATTCGTTCTTGCAAATGTATAGTCGACTGGGAGAGGAGGATGAAGTTGGAATTTTTTTCTCTGAAATTCATTGCAAGAATGTGGTTTCTTGGAATATTTTGATGTCTTTTTATTCCTCCATGGGGGATATTTTGAAAGTTGTAGATACCTTCAACAAAATCATGGGTGAAGTTCCACTCAGCATTGAGACATTAACCATACTTATATCAGCAACTGCGACATCTGATTCCGGGTGTCTGATCCTAGGTGAAAATCTACATTCCTTGGCAATTAAAAGTGGCCTTTATGATGGAATTCTGCGGACTTCTTTGTTGGATATGTATGCCAAGTTTGGGGAGTTGGAAAATTCAACTAGGTTGTTTAAGGGAATCCCAAATAGGAGCATCATTACTTGGGGGGCCATGATGTCTAGTTTTATTCAGAATGGTCATTTTGATGATGCAGTTGAGATCTTCAAGCAAATGCAAACTGCTGGCTTGAAACCCAGTGTTGGAATTATTAAACACTTAATTGATGCTTACGCCTATTTGGGTGCTCTGCAGTTGGGGAAAGCAATACATTGTTACCTCATCCGAATCTATGGATTGGAGATATGTAATACACACTTAGAAACATCTCTCCTAAACATGTATGGAAGATGTGGAAGCGTTGCTTCTGCTAGAAAATGTTTTGACTTGATCTTAATCAAAGATGTTGTGGCGTGGACTTCCATGATTGACGTATATGGTGCTCATGGATTAGGTATTGATGCCCTCAATCTGTTCCGTCAGATGATGAGTGAAGAAGTGGCCCCAAATAATGTCACGTTCTTAAGTTTGTTATCTGCCTGTAGCCACTCTGGCCTTGTAAGTGAGGGCTGTGAAATCTTTTATTCAATGAGATCAAGGTTCCATATTAAGCCTAATTTAGAGCACTACACTTGTTTTGTTGATCTTTTGAGTAGATCAACAAGAGTAAGAGAGGCCTTTGCAATTACATTGAGAATGACAAATCTCTGTGATGGCAGGATTTGGGGTGCTCTTATGGGCGCCTGCCGGGTGTATGGAGACAATAAAATCGCTAACTATGCTGCAGACAGGCTTCTTGAATTAGAACCTGACAATGTAGGCTATTATACTTTGTTGAGCAATTCACAGGCCAGTGTTGGGCAGTGGCATGAAGTTGAAAAATTACGTAGTGTTGTGTATGAGAAAGACCTTGTCAAGAAACCAGGTTGGAGCTTCATTGAGTTAAATGGAACAATTCATGGGTTTGTTTCAGGAGATAGATCACACAACAAGACCAATGAGATTTATGATTTATTGGCGATGGAGCTTATATCTAGCACAGCTCTGAAGTTCGGTTTTGGGCATAGAGCAAATAGTATAAGGTTCTTGGCCTTGAGGCATAGCTTAGGAAGAAACTGGGTTGGAGATCTTGATCTGTTTGTAGAACATGTAGACAGTACATATTTCAAATCTAACCTTTTCAGCCAAGCATATCAAATCCTCCTAGGTTATCTTGTTCAACTTTGTAGCTCATCCATCTTCCTCAAAACATCACCATTGTCCTCAAACACCTCAGCGAAGATCTGTAGTCCAAGTATTAGACTTTAG

Coding sequence (CDS)

ATGCTTACTAGTAATTTTACCCAAATCCATGCCCATCTCATTCTCTCATCTGGGTTCGACACCGTCTCAATTGCCTCCAAGCTCATTCGCCTCTACGCCAAGTTCAATGACTTTCCCAGTGCCGTCTCTGTTCTCAACGTTTTTCCTGACCCGGAACCCATGCTTTGGAACTCCATCATCAAGTCCCACTTTGACTCGGGTTTGTTCCTTTCTGCCCTTTTGTTGTATAAAAGCATGAGGGAGGTGGGAGTTGAGCATGATGGTTTCACGTTTCCGATCGTTAATCATGTCATTATGTCAATTTGGGTTGATGTAGTCTATGCGGGAATGGCCCATTGTGTTGGAATTCGAATGGGGTTTAGTGCTGATTTGTATTTCTGTAATACCATGATGCAGGTTTATGGGAAATGTGAGTGTTTGGTTTATGCTCGTAATGTGTTTGATGAAATGCCTAACAGAGACTTGGTTTCTTGGACCTCGATGATTTCGGCGTATGTTAATGGTGGTGATGTTGTTTCTGCTTTGGATCTTTTTGAGGGAATGAGGAGGGAGTTGGAGCCGAACTCGGTGACAGTAATGGTCATGTTGCAAGCTTGTTGTGCGACTCAAAATTTGGTTCTGGGAAGGCTGCTTCAATGTCATGTAGTTAAGAGTGGTTTATTGTTTGATACAGGTCTGCAGAATTCGTTCTTGCAAATGTATAGTCGACTGGGAGAGGAGGATGAAGTTGGAATTTTTTTCTCTGAAATTCATTGCAAGAATGTGGTTTCTTGGAATATTTTGATGTCTTTTTATTCCTCCATGGGGGATATTTTGAAAGTTGTAGATACCTTCAACAAAATCATGGGTGAAGTTCCACTCAGCATTGAGACATTAACCATACTTATATCAGCAACTGCGACATCTGATTCCGGGTGTCTGATCCTAGGTGAAAATCTACATTCCTTGGCAATTAAAAGTGGCCTTTATGATGGAATTCTGCGGACTTCTTTGTTGGATATGTATGCCAAGTTTGGGGAGTTGGAAAATTCAACTAGGTTGTTTAAGGGAATCCCAAATAGGAGCATCATTACTTGGGGGGCCATGATGTCTAGTTTTATTCAGAATGGTCATTTTGATGATGCAGTTGAGATCTTCAAGCAAATGCAAACTGCTGGCTTGAAACCCAGTGTTGGAATTATTAAACACTTAATTGATGCTTACGCCTATTTGGGTGCTCTGCAGTTGGGGAAAGCAATACATTGTTACCTCATCCGAATCTATGGATTGGAGATATGTAATACACACTTAGAAACATCTCTCCTAAACATGTATGGAAGATGTGGAAGCGTTGCTTCTGCTAGAAAATGTTTTGACTTGATCTTAATCAAAGATGTTGTGGCGTGGACTTCCATGATTGACGTATATGGTGCTCATGGATTAGGTATTGATGCCCTCAATCTGTTCCGTCAGATGATGAGTGAAGAAGTGGCCCCAAATAATGTCACGTTCTTAAGTTTGTTATCTGCCTGTAGCCACTCTGGCCTTGTAAGTGAGGGCTGTGAAATCTTTTATTCAATGAGATCAAGGTTCCATATTAAGCCTAATTTAGAGCACTACACTTGTTTTGTTGATCTTTTGAGTAGATCAACAAGAGTAAGAGAGGCCTTTGCAATTACATTGAGAATGACAAATCTCTGTGATGGCAGGATTTGGGGTGCTCTTATGGGCGCCTGCCGGGTGTATGGAGACAATAAAATCGCTAACTATGCTGCAGACAGGCTTCTTGAATTAGAACCTGACAATGTAGGCTATTATACTTTGTTGAGCAATTCACAGGCCAGTGTTGGGCAGTGGCATGAAGTTGAAAAATTACGTAGTGTTGTGTATGAGAAAGACCTTGTCAAGAAACCAGGTTGGAGCTTCATTGAGTTAAATGGAACAATTCATGGGTTTGTTTCAGGAGATAGATCACACAACAAGACCAATGAGATTTATGATTTATTGGCGATGGAGCTTATATCTAGCACAGCTCTGAAGTTCGGTTTTGGGCATAGAGCAAATAGTATAAGGTTCTTGGCCTTGAGGCATAGCTTAGGAAGAAACTGGGTTGGAGATCTTGATCTGTTTGTAGAACATGTAGACAGTACATATTTCAAATCTAACCTTTTCAGCCAAGCATATCAAATCCTCCTAGGTTATCTTGTTCAACTTTGTAGCTCATCCATCTTCCTCAAAACATCACCATTGTCCTCAAACACCTCAGCGAAGATCTGTAGTCCAAGTATTAGACTTTAG

Protein sequence

MLTSNFTQIHAHLILSSGFDTVSIASKLIRLYAKFNDFPSAVSVLNVFPDPEPMLWNSIIKSHFDSGLFLSALLLYKSMREVGVEHDGFTFPIVNHVIMSIWVDVVYAGMAHCVGIRMGFSADLYFCNTMMQVYGKCECLVYARNVFDEMPNRDLVSWTSMISAYVNGGDVVSALDLFEGMRRELEPNSVTVMVMLQACCATQNLVLGRLLQCHVVKSGLLFDTGLQNSFLQMYSRLGEEDEVGIFFSEIHCKNVVSWNILMSFYSSMGDILKVVDTFNKIMGEVPLSIETLTILISATATSDSGCLILGENLHSLAIKSGLYDGILRTSLLDMYAKFGELENSTRLFKGIPNRSIITWGAMMSSFIQNGHFDDAVEIFKQMQTAGLKPSVGIIKHLIDAYAYLGALQLGKAIHCYLIRIYGLEICNTHLETSLLNMYGRCGSVASARKCFDLILIKDVVAWTSMIDVYGAHGLGIDALNLFRQMMSEEVAPNNVTFLSLLSACSHSGLVSEGCEIFYSMRSRFHIKPNLEHYTCFVDLLSRSTRVREAFAITLRMTNLCDGRIWGALMGACRVYGDNKIANYAADRLLELEPDNVGYYTLLSNSQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGTIHGFVSGDRSHNKTNEIYDLLAMELISSTALKFGFGHRANSIRFLALRHSLGRNWVGDLDLFVEHVDSTYFKSNLFSQAYQILLGYLVQLCSSSIFLKTSPLSSNTSAKICSPSIRL
Homology
BLAST of Lsi01G017990 vs. ExPASy Swiss-Prot
Match: O49619 (Pentatricopeptide repeat-containing protein At4g35130, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H27 PE=3 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 2.3e-110
Identity = 218/640 (34.06%), Postives = 361/640 (56.41%), Query Frame = 0

Query: 26  SKLIRLYAKFNDFPSAVSVLNVFPDPEPMLWNSIIKSHFDSGLFLSALLLYKSMREVGVE 85
           ++ +R +A       A+ + +     +  LWN +IK     GL++ A+  Y  M   GV+
Sbjct: 68  TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVK 127

Query: 86  HDGFTFPIVNHVIMSIWVDVVYAGMAHCVGIRMGFSADLYFCNTMMQVYGKCECLVYARN 145
            D FT+P V   +  I   +      H + I++GF +D+Y CN+++ +Y K  C   A  
Sbjct: 128 ADTFTYPFVIKSVAGI-SSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEK 187

Query: 146 VFDEMPNRDLVSWTSMISAYVNGGDVVSALDLFEGMRR-ELEPNSVTVMVMLQACCATQN 205
           VF+EMP RD+VSW SMIS Y+  GD  S+L LF+ M +   +P+  + M  L AC    +
Sbjct: 188 VFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYS 247

Query: 206 LVLGRLLQCHVVKSGL-LFDTGLQNSFLQMYSRLGEEDEVGIFFSEIHCKNVVSWNILMS 265
             +G+ + CH V+S +   D  +  S L MYS+ GE       F+ +  +N+V+WN+++ 
Sbjct: 248 PKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIG 307

Query: 266 FYSSMGDILKVVDTFNKIMGEVPLSIETLTILISATATSDSGCLILGENLHSLAIKSG-L 325
            Y+  G +      F K+  +  L  + +T +    A++    ++ G  +H  A++ G L
Sbjct: 308 CYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFL 367

Query: 326 YDGILRTSLLDMYAKFGELENSTRLFKGIPNRSIITWGAMMSSFIQNGHFDDAVEIFKQM 385
              +L T+L+DMY + G+L+++  +F  +  +++I+W +++++++QNG    A+E+F+++
Sbjct: 368 PHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQEL 427

Query: 386 QTAGLKPSVGIIKHLIDAYAYLGALQLGKAIHCYLIRIYGLEICNTHLETSLLNMYGRCG 445
             + L P    I  ++ AYA   +L  G+ IH Y+++       NT +  SL++MY  CG
Sbjct: 428 WDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVK--SRYWSNTIILNSLVHMYAMCG 487

Query: 446 SVASARKCFDLILIKDVVAWTSMIDVYGAHGLGIDALNLFRQMMSEEVAPNNVTFLSLLS 505
            +  ARKCF+ IL+KDVV+W S+I  Y  HG G  ++ LF +M++  V PN  TF SLL+
Sbjct: 488 DLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLA 547

Query: 506 ACSHSGLVSEGCEIFYSMRSRFHIKPNLEHYTCFVDLLSRSTRVREAFAITLRMTNLCDG 565
           ACS SG+V EG E F SM+  + I P +EHY C +DL+ R+     A      M  +   
Sbjct: 548 ACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTA 607

Query: 566 RIWGALMGACRVYGDNKIANYAADRLLELEPDNVGYYTLLSNSQASVGQWHEVEKLRSVV 625
           RIWG+L+ A R + D  IA +AA+++ ++E DN G Y LL N  A  G+W +V +++ ++
Sbjct: 608 RIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLM 667

Query: 626 YEKDLVKKPGWSFIELNGTIHGFVSGDRSHNKTNEIYDLL 663
             K + +    S +E  G  H F +GDRSH  TN+IY++L
Sbjct: 668 ESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVL 700

BLAST of Lsi01G017990 vs. ExPASy Swiss-Prot
Match: Q9M1V3 (Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H83 PE=2 SV=2)

HSP 1 Score: 364.4 bits (934), Expect = 3.1e-99
Identity = 213/664 (32.08%), Postives = 367/664 (55.27%), Query Frame = 0

Query: 7   TQIHAHLILSSGFDTVSIASKLIRLYAKFNDFPSAVSVLNVFPDP-EPMLWNSIIKSHFD 66
           +++H+ L+      T  I + L+ +YAK +D  +A  + + F +  + +LWNSI+ S+  
Sbjct: 202 SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYST 261

Query: 67  SGLFLSALLLYKSMREVGVEHDGFTFPIVNHVIMSIWVDVVYAGM-AHCVGIRMG-FSAD 126
           SG  L  L L++ M   G   + +T  IV+ +           G   H   ++    S++
Sbjct: 262 SGKSLETLELFREMHMTGPAPNSYT--IVSALTACDGFSYAKLGKEIHASVLKSSTHSSE 321

Query: 127 LYFCNTMMQVYGKCECLVYARNVFDEMPNRDLVSWTSMISAYVNGGDVVSALDLFEGM-R 186
           LY CN ++ +Y +C  +  A  +  +M N D+V+W S+I  YV       AL+ F  M  
Sbjct: 322 LYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIA 381

Query: 187 RELEPNSVTVMVMLQACCATQNLVLGRLLQCHVVKSGLLFDTGLQ--NSFLQMYSRLGEE 246
              + + V++  ++ A     NL+ G  L  +V+K G  +D+ LQ  N+ + MYS+    
Sbjct: 382 AGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHG--WDSNLQVGNTLIDMYSKCNLT 441

Query: 247 DEVGIFFSEIHCKNVVSWNILMSFYSSMGDILKVVDTFNKIMGEVPLSIETLTILISATA 306
             +G  F  +H K+++SW  +++ Y+     ++ ++ F  +  +  + I+ + +     A
Sbjct: 442 CYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDV-AKKRMEIDEMILGSILRA 501

Query: 307 TSDSGCLILGENLHSLAIKSGLYDGILRTSLLDMYAKFGELENSTRLFKGIPNRSIITWG 366
           +S    +++ + +H   ++ GL D +++  L+D+Y K   +  +TR+F+ I  + +++W 
Sbjct: 502 SSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWT 561

Query: 367 AMMSSFIQNGHFDDAVEIFKQMQTAGLKPSVGIIKHLIDAYAYLGALQLGKAIHCYLIRI 426
           +M+SS   NG+  +AVE+F++M   GL      +  ++ A A L AL  G+ IHCYL+R 
Sbjct: 562 SMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRK 621

Query: 427 -YGLEICNTHLETSLLNMYGRCGSVASARKCFDLILIKDVVAWTSMIDVYGAHGLGIDAL 486
            + LE     +  ++++MY  CG + SA+  FD I  K ++ +TSMI+ YG HG G  A+
Sbjct: 622 GFCLE---GSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAV 681

Query: 487 NLFRQMMSEEVAPNNVTFLSLLSACSHSGLVSEGCEIFYSMRSRFHIKPNLEHYTCFVDL 546
            LF +M  E V+P++++FL+LL ACSH+GL+ EG      M   + ++P  EHY C VD+
Sbjct: 682 ELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDM 741

Query: 547 LSRSTRVREAFAITLRMTNLCDGRIWGALMGACRVYGDNKIANYAADRLLELEPDNVGYY 606
           L R+  V EAF     M       +W AL+ ACR + + +I   AA RLLELEP N G  
Sbjct: 742 LGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNL 801

Query: 607 TLLSNSQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGTIHGFVSGDRSHNKTNEIY 664
            L+SN  A  G+W++VEK+R+ +    + K PG S+IE++G +H F + D+SH ++ EIY
Sbjct: 802 VLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIY 857

BLAST of Lsi01G017990 vs. ExPASy Swiss-Prot
Match: O81767 (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX=3702 GN=EMB2758 PE=3 SV=2)

HSP 1 Score: 364.0 bits (933), Expect = 4.1e-99
Identity = 207/662 (31.27%), Postives = 361/662 (54.53%), Query Frame = 0

Query: 9   IHAHLILSSGFDTVSIASKLIRLYAKFNDFPSAVSVLNVFPDPEPMLWNSIIKSHFDSGL 68
           +HA L++S     V I++KL+ LY    +   A    +   + +   WN +I  +  +G 
Sbjct: 73  LHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGN 132

Query: 69  FLSALLLYK-SMREVGVEHDGFTFPIVNHVIMSIWVDVVYAGMAHCVGIRMGFSADLYFC 128
               +  +   M   G+  D  TFP V    +     V+     HC+ ++ GF  D+Y  
Sbjct: 133 SSEVIRCFSLFMLSSGLTPDYRTFPSV----LKACRTVIDGNKIHCLALKFGFMWDVYVA 192

Query: 129 NTMMQVYGKCECLVYARNVFDEMPNRDLVSWTSMISAYVNGGDVVSALDLFEGMRRELEP 188
            +++ +Y + + +  AR +FDEMP RD+ SW +MIS Y   G+   AL L  G+R     
Sbjct: 193 ASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR---AM 252

Query: 189 NSVTVMVMLQACCATQNLVLGRLLQCHVVKSGLLFDTGLQNSFLQMYSRLGEEDEVGIFF 248
           +SVTV+ +L AC    +   G  +  + +K GL  +  + N  + +Y+  G   +    F
Sbjct: 253 DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVF 312

Query: 249 SEIHCKNVVSWNILMSFYSSMGDILKVVDTFNKIMGEVPLSIETLTILISATATSDSGCL 308
             ++ ++++SWN ++  Y      L+ +  F + M    +  + LT++  A+  S  G +
Sbjct: 313 DRMYVRDLISWNSIIKAYELNEQPLRAISLFQE-MRLSRIQPDCLTLISLASILSQLGDI 372

Query: 309 ILGENLHSLAIKSG--LYDGILRTSLLDMYAKFGELENSTRLFKGIPNRSIITWGAMMSS 368
               ++    ++ G  L D  +  +++ MYAK G ++++  +F  +PN  +I+W  ++S 
Sbjct: 373 RACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISG 432

Query: 369 FIQNGHFDDAVEIFKQMQTAG-LKPSVGIIKHLIDAYAYLGALQLGKAIHCYLIRIYGLE 428
           + QNG   +A+E++  M+  G +  + G    ++ A +  GAL+ G  +H  L++  GL 
Sbjct: 433 YAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLK-NGLY 492

Query: 429 ICNTHLETSLLNMYGRCGSVASARKCFDLILIKDVVAWTSMIDVYGAHGLGIDALNLFRQ 488
           + +  + TSL +MYG+CG +  A   F  I   + V W ++I  +G HG G  A+ LF++
Sbjct: 493 L-DVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKE 552

Query: 489 MMSEEVAPNNVTFLSLLSACSHSGLVSEGCEIFYSMRSRFHIKPNLEHYTCFVDLLSRST 548
           M+ E V P+++TF++LLSACSHSGLV EG   F  M++ + I P+L+HY C VD+  R+ 
Sbjct: 553 MLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAG 612

Query: 549 RVREAFAITLRMTNLCDGRIWGALMGACRVYGDNKIANYAADRLLELEPDNVGYYTLLSN 608
           ++  A      M+   D  IWGAL+ ACRV+G+  +   A++ L E+EP++VGY+ LLSN
Sbjct: 613 QLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSN 672

Query: 609 SQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGTIHGFVSGDRSHNKTNEIY-DLLA 666
             AS G+W  V+++RS+ + K L K PGWS +E++  +  F +G+++H    E+Y +L A
Sbjct: 673 MYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTA 724

BLAST of Lsi01G017990 vs. ExPASy Swiss-Prot
Match: Q9C507 (Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E66 PE=3 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 7.0e-99
Identity = 202/657 (30.75%), Postives = 365/657 (55.56%), Query Frame = 0

Query: 8   QIHAHLILSSGFDTVSIASKLIRLYAKFNDFPSAVSVLNVFPDPEPMLWNSIIKSHFDSG 67
           ++H  +I     D   I + L+ +Y +  +   A  V +  P  + + W++++ S  ++G
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENG 181

Query: 68  LFLSALLLYKSMREVGVEHDGFTFPIVNHVIMSIWVDVVYAGMAHCVGIRMGFSADLYFC 127
             + AL ++K M + GVE D  T   V      +   +  A   H    R  F  D   C
Sbjct: 182 EVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGC-LRIARSVHGQITRKMFDLDETLC 241

Query: 128 NTMMQVYGKCECLVYARNVFDEMPNRDLVSWTSMISAYVNGGDVVSALDLF-EGMRRELE 187
           N+++ +Y KC  L+ +  +F+++  ++ VSWT+MIS+Y  G     AL  F E ++  +E
Sbjct: 242 NSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIE 301

Query: 188 PNSVTVMVMLQACCATQNLVLGRLLQCHVVKSGLLFD-TGLQNSFLQMYSRLGEEDEVGI 247
           PN VT+  +L +C     +  G+ +    V+  L  +   L  + +++Y+  G+  +   
Sbjct: 302 PNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCET 361

Query: 248 FFSEIHCKNVVSWNILMSFYSSMGDILKVVDTFNKIMGEVPLSIETLTILISATATSDSG 307
               +  +N+V+WN L+S Y+  G +++ +  F +++ +  +  +  T+  S +A  ++G
Sbjct: 362 VLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQ-RIKPDAFTLASSISACENAG 421

Query: 308 CLILGENLHSLAIKSGLYDGILRTSLLDMYAKFGELENSTRLFKGIPNRSIITWGAMMSS 367
            + LG+ +H   I++ + D  ++ SL+DMY+K G +++++ +F  I +RS++TW +M+  
Sbjct: 422 LVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCG 481

Query: 368 FIQNGHFDDAVEIFKQMQTAGLKPSVGIIKHLIDAYAYLGALQLGKAIHCYLIRIYGLEI 427
           F QNG+  +A+ +F  M  + L+ +      +I A + +G+L+ GK +H  LI I GL+ 
Sbjct: 482 FSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLI-ISGLK- 541

Query: 428 CNTHLETSLLNMYGRCGSVASARKCFDLILIKDVVAWTSMIDVYGAHGLGIDALNLFRQM 487
            +   +T+L++MY +CG + +A   F  +  + +V+W+SMI+ YG HG    A++ F QM
Sbjct: 542 -DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQM 601

Query: 488 MSEEVAPNNVTFLSLLSACSHSGLVSEGCEIFYSMRSRFHIKPNLEHYTCFVDLLSRSTR 547
           +     PN V F+++LSAC HSG V EG + ++++   F + PN EH+ CF+DLLSRS  
Sbjct: 602 VESGTKPNEVVFMNVLSACGHSGSVEEG-KYYFNLMKSFGVSPNSEHFACFIDLLSRSGD 661

Query: 548 VREAFAITLRMTNLCDGRIWGALMGACRVYGDNKIANYAADRLLELEPDNVGYYTLLSNS 607
           ++EA+     M  L D  +WG+L+  CR++    I     + L ++  D+ GYYTLLSN 
Sbjct: 662 LKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNI 721

Query: 608 QASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGTIHGFVSGDRSHNKTNEIYDLL 663
            A  G+W E  +LRS +   +L K PG+S IE++  +  F +G+ +  +T+EIY  L
Sbjct: 722 YAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFL 772

BLAST of Lsi01G017990 vs. ExPASy Swiss-Prot
Match: Q9SS60 (Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H23 PE=2 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.2e-98
Identity = 207/665 (31.13%), Postives = 365/665 (54.89%), Query Frame = 0

Query: 14  ILSSGFDT-VSIASKLIRLYAKFNDFPSAVSVLNVFPDPEPMLWNSIIKSHFDSGLFLSA 73
           IL  GF++ + + + L+ +Y++      A  V +  P  + + WNS+I  +   G +  A
Sbjct: 132 ILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191

Query: 74  LLLYKSMREVGVEHDGFTFPIVNHVIMSIWVDVVYAGMAHCVGIRMGFSADLYFCNTMMQ 133
           L +Y  ++   +  D FT   V     ++ V     G+ H   ++ G ++ +   N ++ 
Sbjct: 192 LEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGL-HGFALKSGVNSVVVVNNGLVA 251

Query: 134 VYGKCECLVYARNVFDEMPNRDLVSWTSMISAYVNGGDVVSALDLFEGMRRELEPNSVTV 193
           +Y K      AR VFDEM  RD VS+ +MI  Y+    V  ++ +F     + +P+ +TV
Sbjct: 252 MYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTV 311

Query: 194 MVMLQACCATQNLVLGRLLQCHVVKSGLLFDTGLQNSFLQMYSRLGEEDEVGIFFSEIHC 253
             +L+AC   ++L L + +  +++K+G + ++ ++N  + +Y++ G+       F+ + C
Sbjct: 312 SSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMEC 371

Query: 254 KNVVSWNILMSFYSSMGDILKVVDTFNKIMGEVPLSIETLTILISATATSDSGCLILGEN 313
           K+ VSWN ++S Y   GD+++ +  F K+M  +    + +T L+  + ++    L  G+ 
Sbjct: 372 KDTVSWNSIISGYIQSGDLMEAMKLF-KMMMIMEEQADHITYLMLISVSTRLADLKFGKG 431

Query: 314 LHSLAIKSGL-YDGILRTSLLDMYAKFGELENSTRLFKGIPNRSIITWGAMMSSFIQNGH 373
           LHS  IKSG+  D  +  +L+DMYAK GE+ +S ++F  +     +TW  ++S+ ++ G 
Sbjct: 432 LHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGD 491

Query: 374 FDDAVEIFKQMQTAGLKPSVGIIKHLIDAYAYLGALQLGKAIHCYLIRIYGLEICNTHLE 433
           F   +++  QM+ + + P +      +   A L A +LGK IHC L+R +G E     + 
Sbjct: 492 FATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR-FGYE-SELQIG 551

Query: 434 TSLLNMYGRCGSVASARKCFDLILIKDVVAWTSMIDVYGAHGLGIDALNLFRQMMSEEVA 493
            +L+ MY +CG + ++ + F+ +  +DVV WT MI  YG +G G  AL  F  M    + 
Sbjct: 552 NALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIV 611

Query: 494 PNNVTFLSLLSACSHSGLVSEGCEIFYSMRSRFHIKPNLEHYTCFVDLLSRSTRVREAFA 553
           P++V F++++ ACSHSGLV EG   F  M++ + I P +EHY C VDLLSRS ++ +A  
Sbjct: 612 PDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEE 671

Query: 554 ITLRMTNLCDGRIWGALMGACRVYGDNKIANYAADRLLELEPDNVGYYTLLSNSQASVGQ 613
               M    D  IW +++ ACR  GD + A   + R++EL PD+ GY  L SN+ A++ +
Sbjct: 672 FIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRK 731

Query: 614 WHEVEKLRSVVYEKDLVKKPGWSFIELNGTIHGFVSGDRSHNKTNEIYDLLAMELISSTA 673
           W +V  +R  + +K + K PG+S+IE+   +H F SGD S  ++  IY   ++E++ S  
Sbjct: 732 WDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYK--SLEILYSLM 790

Query: 674 LKFGF 677
            K G+
Sbjct: 792 AKEGY 790

BLAST of Lsi01G017990 vs. ExPASy TrEMBL
Match: A0A1S3C6I7 (pentatricopeptide repeat-containing protein At4g35130, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497256 PE=4 SV=1)

HSP 1 Score: 1108.6 bits (2866), Expect = 0.0e+00
Identity = 547/609 (89.82%), Postives = 571/609 (93.76%), Query Frame = 0

Query: 54  MLWNSIIKSHFDSGLFLSALLLYKSMREVGVEHDGFTFPIVNHVIMSIWVDVVYAGMAHC 113
           MLWN++IKSHFDSGLF SALLLYK+MREV VEHDGFT PIVN VI+SIWVDVVY GM HC
Sbjct: 1   MLWNNVIKSHFDSGLFHSALLLYKNMREVRVEHDGFTLPIVNQVILSIWVDVVYGGMVHC 60

Query: 114 VGIRMGFSADLYFCNTMMQVYGKCECLVYARNVFDEMPNRDLVSWTSMISAYVNGGDVVS 173
           VGIRMGFS+DLYFCNTMM+VYGKC CLV AR+VFDEMPNRDLVSWTSMISAYV GGDV  
Sbjct: 61  VGIRMGFSSDLYFCNTMMEVYGKCGCLVSARDVFDEMPNRDLVSWTSMISAYVKGGDVFC 120

Query: 174 ALDLFEGMRRELEPNSVTVMVMLQACCATQNLVLGRLLQCHVVKSGLLFDTGLQNSFLQM 233
           ALD+FEGMRRELEPNSVTV+VMLQACCATQNLVLGRLLQC+VVK+GLLFDTGLQNSFL+M
Sbjct: 121 ALDIFEGMRRELEPNSVTVIVMLQACCATQNLVLGRLLQCYVVKNGLLFDTGLQNSFLRM 180

Query: 234 YSRLGEEDEVGIFFSEIHCKNVVSWNILMSFYSSMGDILKVVDTFNKIMGEVPLSIETLT 293
           YSRLG EDEV  FFSEI  KNVVSWNILMSFYSSMGDI+KVVD  NKIMGEVPLSIETLT
Sbjct: 181 YSRLGGEDEVVAFFSEIDFKNVVSWNILMSFYSSMGDIVKVVDILNKIMGEVPLSIETLT 240

Query: 294 ILISATATSDSGCLILGENLHSLAIKSGLYDGILRTSLLDMYAKFGELENSTRLFKGIPN 353
           ILIS  ATSDSGCLILGENLHSLAIKSGLYD IL TSLLDMYAKFGELENSTRLFK IPN
Sbjct: 241 ILISGIATSDSGCLILGENLHSLAIKSGLYDDILCTSLLDMYAKFGELENSTRLFKEIPN 300

Query: 354 RSIITWGAMMSSFIQNGHFDDAVEIFKQMQTAGLKPSVGIIKHLIDAYAYLGALQLGKAI 413
           RSIITWGAMMSSFIQNGHFDDAV+IFKQMQ AGLKPSVGI+KHLIDAYAYLGALQLGKAI
Sbjct: 301 RSIITWGAMMSSFIQNGHFDDAVDIFKQMQVAGLKPSVGILKHLIDAYAYLGALQLGKAI 360

Query: 414 HCYLIRIYGLEICNTHLETSLLNMYGRCGSVASARKCFDLILIKDVVAWTSMIDVYGAHG 473
           HC+LIRIYGL +CNT LETS+LNMY RCGS+ASARKCFDLILIKDVVAWTSMI+ YGAHG
Sbjct: 361 HCHLIRIYGLVVCNTRLETSVLNMYVRCGSIASARKCFDLILIKDVVAWTSMIEGYGAHG 420

Query: 474 LGIDALNLFRQMMSEEVAPNNVTFLSLLSACSHSGLVSEGCEIFYSMRSRFHIKPNLEHY 533
           LGIDALNLF QM SEEV PNNVTFLSLLSACSHSGLVSEGC IFYSMRSRF+IKP+LEHY
Sbjct: 421 LGIDALNLFHQMTSEEVTPNNVTFLSLLSACSHSGLVSEGCGIFYSMRSRFNIKPDLEHY 480

Query: 534 TCFVDLLSRSTRVREAFAITLRMTNLCDGRIWGALMGACRVYGDNKIANYAADRLLELEP 593
           TCFVDLLSRSTRVREAFAI LRMTNLCDGRIWGALMGACRVYGDNKIANYAA RLLELEP
Sbjct: 481 TCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIANYAAHRLLELEP 540

Query: 594 DNVGYYTLLSNSQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGTIHGFVSGDRSHN 653
           DNVGYYTLLSNSQASVGQWHE EKLRS+VYEK+L KKPGWSFIELNGTIHGFVSGDRSH 
Sbjct: 541 DNVGYYTLLSNSQASVGQWHEAEKLRSLVYEKNLAKKPGWSFIELNGTIHGFVSGDRSHY 600

Query: 654 KTNEIYDLL 663
           K NEIYDLL
Sbjct: 601 KANEIYDLL 609

BLAST of Lsi01G017990 vs. ExPASy TrEMBL
Match: A0A6J1EYH5 (pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111439622 PE=4 SV=1)

HSP 1 Score: 1073.9 bits (2776), Expect = 2.8e-310
Identity = 523/610 (85.74%), Postives = 567/610 (92.95%), Query Frame = 0

Query: 54  MLWNSIIKSHFDSGLFLSALLLYKSMREVGVEHDGFTFPIVNHVIMSIWVDVVYAGMAHC 113
           MLWNSIIKS FDSGLFLSA++LYK+MREVGVEHDGFTFPI+NHV+MSIWVDVVYAGM HC
Sbjct: 1   MLWNSIIKSQFDSGLFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHC 60

Query: 114 VGIRMGFSADLYFCNTMMQVYGKCECLVYARNVFDEMPNRDLVSWTSMISAYVNGGDVVS 173
           VGIRMGF +DLYFCNTMM+VY KCECL +AR VFDEMPNRDLVSWTSMISAYVN GD+V 
Sbjct: 61  VGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVC 120

Query: 174 ALDLFEGMRRELEPNSVTVMVMLQACCATQNLVLGRLLQCHVVKSGLLFDTGLQNSFLQM 233
           AL+LFEGMRR  EPNSVT+M MLQACC T++LVLGRL+QC VVK+GLLFD GLQN FL+M
Sbjct: 121 ALNLFEGMRRVFEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRM 180

Query: 234 YSRLGEEDEVGIFFSEIHCKNVVSWNILMSFYSSMGDILKVVDTFNKIM-GEVPLSIETL 293
           YSRLG EDE   FFSEI CKNVVSW+IL+SFYSS+GDI+K VD F +IM GEVPL IETL
Sbjct: 181 YSRLGGEDEFVRFFSEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETL 240

Query: 294 TILISATATSDSGCLILGENLHSLAIKSGLYDGILRTSLLDMYAKFGELENSTRLFKGIP 353
           TILISAT TSDS CLILGENLHSLAIK+GLYD ILRTSLLDMYAKFGEL+NSTRLF  IP
Sbjct: 241 TILISATKTSDSMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIP 300

Query: 354 NRSIITWGAMMSSFIQNGHFDDAVEIFKQMQTAGLKPSVGIIKHLIDAYAYLGALQLGKA 413
           NRSIITWGAMMSSFIQNGHFD+AVEIF QMQ AGLKPS+GI+KHLIDAYA+LGALQLG+ 
Sbjct: 301 NRSIITWGAMMSSFIQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG 360

Query: 414 IHCYLIRIYGLEICNTHLETSLLNMYGRCGSVASARKCFDLILIKDVVAWTSMIDVYGAH 473
           IHCYLIRIYGLEICNTHLETSL+NMY RCGS+ASARKCFDLI++KDVVAWTSMI+ YG+H
Sbjct: 361 IHCYLIRIYGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGSH 420

Query: 474 GLGIDALNLFRQMMSEEVAPNNVTFLSLLSACSHSGLVSEGCEIFYSMRSRFHIKPNLEH 533
           G GI+ALNL+  MMSEEVAPN+VTFLSLLSACSHSGLVSEGCEIFYSMRSRF+IKP+LEH
Sbjct: 421 GQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEH 480

Query: 534 YTCFVDLLSRSTRVREAFAITLRMTNLCDGRIWGALMGACRVYGDNKIANYAADRLLELE 593
           YTCFVDLLSRSTRVREAFAI LRMTNLCDGRIWGALMGACRVYGDNKIA YAA RLLELE
Sbjct: 481 YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELE 540

Query: 594 PDNVGYYTLLSNSQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGTIHGFVSGDRSH 653
           PDNVGYYTLLSN+QASVGQWHEVEKLRSVVYEKD VKKPGWSF+ELNGT+HGFVSGDRSH
Sbjct: 541 PDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKDFVKKPGWSFVELNGTLHGFVSGDRSH 600

Query: 654 NKTNEIYDLL 663
            KT++IYDLL
Sbjct: 601 CKTDQIYDLL 610

BLAST of Lsi01G017990 vs. ExPASy TrEMBL
Match: A0A6J1HTH3 (pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111467326 PE=4 SV=1)

HSP 1 Score: 1056.6 bits (2731), Expect = 4.9e-305
Identity = 518/610 (84.92%), Postives = 563/610 (92.30%), Query Frame = 0

Query: 54  MLWNSIIKSHFDSGLFLSALLLYKSMREVGVEHDGFTFPIVNHVIMSIWVDVVYAGMAHC 113
           MLWNSIIKS FDSGLF SA++LYK+MREVGVEHDGFTFPI+NHV+MSI VDVVYAGM HC
Sbjct: 1   MLWNSIIKSQFDSGLFQSAIMLYKNMREVGVEHDGFTFPILNHVVMSICVDVVYAGMVHC 60

Query: 114 VGIRMGFSADLYFCNTMMQVYGKCECLVYARNVFDEMPNRDLVSWTSMISAYVNGGDVVS 173
           VGIRMGF +DLYFCNTMM+VY KCECL +AR VFDEMPNRDLVSWTSMISAYVN G +V 
Sbjct: 61  VGIRMGFGSDLYFCNTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNSGVIVC 120

Query: 174 ALDLFEGMRRELEPNSVTVMVMLQACCATQNLVLGRLLQCHVVKSGLLFDTGLQNSFLQM 233
           AL+LFEGMRR LEPNSVT+M MLQACC T++LVLGRL+QC VVK+GLLFD GLQN FL+M
Sbjct: 121 ALNLFEGMRRVLEPNSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRM 180

Query: 234 YSRLGEEDEVGIFFSEIHCKNVVSWNILMSFYSSMGDILKVVDTFNKIM-GEVPLSIETL 293
           YSRLG EDE    FSEI CKNVVSWNIL+SFY S+GDI+K VD F +IM GEVPL I+TL
Sbjct: 181 YSRLGGEDEFVRVFSEIDCKNVVSWNILISFYFSVGDIVKAVDIFKQIMSGEVPLIIDTL 240

Query: 294 TILISATATSDSGCLILGENLHSLAIKSGLYDGILRTSLLDMYAKFGELENSTRLFKGIP 353
           TILISAT TS+S CLILGENLHSLAIK+GLYD ILRTSLLDMYAK GEL+NSTRLF  IP
Sbjct: 241 TILISATKTSESMCLILGENLHSLAIKTGLYDSILRTSLLDMYAKIGELDNSTRLFNEIP 300

Query: 354 NRSIITWGAMMSSFIQNGHFDDAVEIFKQMQTAGLKPSVGIIKHLIDAYAYLGALQLGKA 413
           NRSIITWGAMMSSFIQNGHFD+AV+IF QMQ AGLKPS+GI+KHLIDAYA+LGALQLG+ 
Sbjct: 301 NRSIITWGAMMSSFIQNGHFDEAVDIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRG 360

Query: 414 IHCYLIRIYGLEICNTHLETSLLNMYGRCGSVASARKCFDLILIKDVVAWTSMIDVYGAH 473
           IHCYLIRI+GLEICNTHLETSL+NMY RCGS+ASARKCFDLI++KDVVAWTSMI+ YGAH
Sbjct: 361 IHCYLIRIHGLEICNTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAH 420

Query: 474 GLGIDALNLFRQMMSEEVAPNNVTFLSLLSACSHSGLVSEGCEIFYSMRSRFHIKPNLEH 533
           G GI+ALNL+  MMSEEVAPN+VTFLSLLSACSHSGLVSEGCEIFYSMRSRF+IKP+LEH
Sbjct: 421 GQGINALNLYHHMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEH 480

Query: 534 YTCFVDLLSRSTRVREAFAITLRMTNLCDGRIWGALMGACRVYGDNKIANYAADRLLELE 593
           YTCFVDLLSRSTRVREAFAI LRMTNLCDGRIWGALMGACRVYGDNKIA YAA RLLELE
Sbjct: 481 YTCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELE 540

Query: 594 PDNVGYYTLLSNSQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGTIHGFVSGDRSH 653
           PDNVGYYTLLSN+QASVGQWHEVEKLRSVVYEK+LVKKPGWSFIELNGTIHGFVSGDRSH
Sbjct: 541 PDNVGYYTLLSNTQASVGQWHEVEKLRSVVYEKNLVKKPGWSFIELNGTIHGFVSGDRSH 600

Query: 654 NKTNEIYDLL 663
            KT++IYDLL
Sbjct: 601 CKTDQIYDLL 610

BLAST of Lsi01G017990 vs. ExPASy TrEMBL
Match: A0A6J1DKA1 (pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111021322 PE=4 SV=1)

HSP 1 Score: 1038.5 bits (2684), Expect = 1.4e-299
Identity = 512/609 (84.07%), Postives = 549/609 (90.15%), Query Frame = 0

Query: 54  MLWNSIIKSHFDSGLFLSALLLYKSMREVGVEHDGFTFPIVNHVIMSIWVDVVYAGMAHC 113
           MLWNSIIKSH +SGLF+SALLLYK MRE+GVEHDGFTFP+VN +IMSI +DVVYAGM HC
Sbjct: 1   MLWNSIIKSHVESGLFVSALLLYKKMRELGVEHDGFTFPMVNRIIMSIQLDVVYAGMVHC 60

Query: 114 VGIRMGFSADLYFCNTMMQVYGKCECLVYARNVFDEMPNRDLVSWTSMISAYVNGGDVVS 173
           VGIRMGF ADLYFCNTMM+VYGKC CLV ARNVFDEMP+RDLVSWTSMIS YV  GDVVS
Sbjct: 61  VGIRMGFGADLYFCNTMMEVYGKCGCLVSARNVFDEMPHRDLVSWTSMISVYVCRGDVVS 120

Query: 174 ALDLFEGMRRELEPNSVTVMVMLQACCATQNLVLGRLLQCHVVKSGLLFDTGLQNSFLQM 233
            LDLFEGMRRELEPNSVT+MVM+QACCAT NL LGR LQ HV K+GLLFD GLQNS L+M
Sbjct: 121 GLDLFEGMRRELEPNSVTIMVMVQACCATGNLSLGRQLQSHVFKNGLLFDIGLQNSLLRM 180

Query: 234 YSRLGEEDEVGIFFSEIHCKNVVSWNILMSFYSSMGDILKVVDTFNKIMGEVPLSIETLT 293
           Y+RLG EDEVG+FFSE+  KNVVSWN+ +SFYSS GD +KVVD FNKIMGEV LS+ETLT
Sbjct: 181 YTRLGGEDEVGVFFSEVDRKNVVSWNVFISFYSSRGDFVKVVDIFNKIMGEVLLSVETLT 240

Query: 294 ILISATATSDSGCLILGENLHSLAIKSGLYDGILRTSLLDMYAKFGELENSTRLFKGIPN 353
           IL+SATA  DS  LILG+NLHSLAIKSGLYDGIL+TS LDMYAKFGELENSTRLFK IP 
Sbjct: 241 ILVSATAAPDSEHLILGKNLHSLAIKSGLYDGILQTSFLDMYAKFGELENSTRLFKEIPR 300

Query: 354 RSIITWGAMMSSFIQNGHFDDAVEIFKQMQTAGLKPSVGIIKHLIDAYAYLGALQLGKAI 413
           +SIITWGAMMSSFIQNGHFD AVEIF QMQ AGLKPSVGI+KHLIDAY +LG LQLGKAI
Sbjct: 301 KSIITWGAMMSSFIQNGHFDGAVEIFNQMQAAGLKPSVGILKHLIDAYTHLGVLQLGKAI 360

Query: 414 HCYLIRIYGLEICNTHLETSLLNMYGRCGSVASARKCFDLILIKDVVAWTSMIDVYGAHG 473
           HCYLIR+ GLEI NT L TS+LNMY RCGS+ SA KCFDLILIKDVVAWTSMI+ YGAHG
Sbjct: 361 HCYLIRLNGLEIYNTQLGTSILNMYVRCGSLVSAIKCFDLILIKDVVAWTSMIEGYGAHG 420

Query: 474 LGIDALNLFRQMMSEEVAPNNVTFLSLLSACSHSGLVSEGCEIFYSMRSRFHIKPNLEHY 533
           LG DALNLF QMM EEV PNNVTFLSLLSACSHSGLVSEGC+IFYSMRSRF+I P+LEHY
Sbjct: 421 LGFDALNLFLQMMREEVTPNNVTFLSLLSACSHSGLVSEGCQIFYSMRSRFNINPDLEHY 480

Query: 534 TCFVDLLSRSTRVREAFAITLRMTNLCDGRIWGALMGACRVYGDNKIANYAADRLLELEP 593
           TCFVDLLSRSTRVREAFAI LRMTN  DGRIWGALMGACRVY DNKIANYAA RLLELEP
Sbjct: 481 TCFVDLLSRSTRVREAFAIILRMTNFRDGRIWGALMGACRVYEDNKIANYAAHRLLELEP 540

Query: 594 DNVGYYTLLSNSQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGTIHGFVSGDRSHN 653
           DNVGYYTLLSN+QA+VGQWH+VEKLRSVVYEKDLVKKPGWSFIEL G +HGFVSGDRSH+
Sbjct: 541 DNVGYYTLLSNAQATVGQWHDVEKLRSVVYEKDLVKKPGWSFIELKGIVHGFVSGDRSHD 600

Query: 654 KTNEIYDLL 663
           KT EIYDLL
Sbjct: 601 KTKEIYDLL 609

BLAST of Lsi01G017990 vs. ExPASy TrEMBL
Match: A0A6P5TSX7 (pentatricopeptide repeat-containing protein At4g19191, mitochondrial-like OS=Prunus avium OX=42229 GN=LOC110770265 PE=4 SV=1)

HSP 1 Score: 747.3 bits (1928), Expect = 6.4e-212
Identity = 379/670 (56.57%), Postives = 487/670 (72.69%), Query Frame = 0

Query: 8   QIHAHLILSSGFDTVSIASKLIRLYAKFNDFPSAVSVLNVFPDPEPMLWNSIIKSHFDSG 67
           Q+HA +++S+GF   S+ SK+I LY++FN   SA  V     +P  MLWN IIKSH DSG
Sbjct: 117 QVHARILVSTGFKPPSLLSKVITLYSRFNGVESAALVFRSIQEPNTMLWNLIIKSHVDSG 176

Query: 68  LFLSALLLYKSMREVGVEHDGFTFPIVNHVIMSIWVDVVYAGMAHCVGIRMGFSADLYFC 127
           L  SALLLYK M E+GV HD FTFPIVN  ++ +  D  Y+GM HCV I++GF  D+Y  
Sbjct: 177 LLGSALLLYKKMLELGVSHDCFTFPIVNRAVLLLGSDATYSGMVHCVAIQIGFGMDVYVG 236

Query: 128 NTMMQVYGKCECLVYARNVFDEMPNRDLVSWTSMISAYVNGGDVVSALDLFEGMRRELEP 187
           NTM+  Y KC  L YAR +FDEM  RDLV+WTSMIS YV+ G+V     LF  MRRELEP
Sbjct: 237 NTMIDAYVKCGRLDYARKLFDEMRQRDLVTWTSMISGYVSEGNVACGFSLFSEMRRELEP 296

Query: 188 NSVTVMVMLQACCATQNLVLGRLLQCHVVKSGLLFDTGLQNSFLQMYSRLGEEDEVGIFF 247
           N+VT++VMLQ CC  +  V G  L  + +KSGLL D  +QNS  +MY++LG  D+V  FF
Sbjct: 297 NAVTMLVMLQGCCDIEISVYGEPLHGYGIKSGLLNDGSVQNSIFRMYAKLGTVDQVEDFF 356

Query: 248 SEIHCKNVVSWNILMSFYSSMGDILKVVDTFNKIMGEVPLSIETLTILISATATSDSGCL 307
            E+  ++VVSWNI +SFYS  GD++KV+D F+++ GEV  S ETLT++IS  A +  G L
Sbjct: 357 IELDRRDVVSWNIRISFYSWRGDVVKVIDLFHEMQGEVAPSSETLTLVIS--ALTKHGIL 416

Query: 308 ILGENLHSLAIKSGLYDGILRTSLLDMYAKFGELENSTRLFKGIPNRSIITWGAMMSSFI 367
             GE+LH LA KSGL D +L+TSLLD YAK GEL NS +LF+ +P+R+ ITWGAMM  FI
Sbjct: 417 SQGESLHCLATKSGLCDDVLQTSLLDFYAKCGELGNSDKLFREMPHRNSITWGAMMFGFI 476

Query: 368 QNGHFDDAVEIFKQMQTAGLKPSVGIIKHLIDAYAYLGALQLGKAIHCYLIR--IYGLEI 427
           QNG F++AV +F +MQ AG++P   I++ L+DA+A LGAL+LGK IH  +IR      E 
Sbjct: 477 QNGCFNEAVGLFGRMQAAGVEPGAEILRSLVDAFANLGALKLGKGIHGCIIRKSFCDAEK 536

Query: 428 CNTHLETSLLNMYGRCGSVASARKCFDLILIKDVVAWTSMIDVYGAHGLGIDALNLFRQM 487
           CNTHLETSL+NMY RCGS+++AR CF  +LI+D+VAWTSMI+ YG+HGLG++AL LF  M
Sbjct: 537 CNTHLETSLINMYIRCGSISTARVCFSRMLIRDIVAWTSMIEGYGSHGLGLEALKLFDLM 596

Query: 488 MSEEVAPNNVTFLSLLSACSHSGLVSEGCEIFYSMRSRFHIKPNLEHYTCFVDLLSRSTR 547
           + E   PN+VT LSLLSACSHSGLV+EGCE F SM+ +F I+P+L+HYT  VDLL RS +
Sbjct: 597 IREGTKPNSVTILSLLSACSHSGLVTEGCEAFCSMKWKFGIEPDLDHYTSIVDLLGRSGK 656

Query: 548 VREAFAITLRMTNLCDGRIWGALMGACRVYGDNKIANYAADRLLELEPDNVGYYTLLSNS 607
           ++EA    ++M +  D RIWGAL+   R+YG   +  +AA RLLELEPDNVGYYTLLSN+
Sbjct: 657 LKEALVFIMKMASFPDSRIWGALLSGSRIYGRRDVGEFAAQRLLELEPDNVGYYTLLSNT 716

Query: 608 QASVGQWHEVEKLRSVVYEKDLVKKPGWSFIEL-NGTIHGFVSGDRSHNKTNEIYDLLAM 667
           QASVG+W EVE++R V+ E+DL KKPGWS IE   G I+GFVSGDRSH++T  IY++L  
Sbjct: 717 QASVGEWDEVEEIRRVMKERDLKKKPGWSCIEAEEGRIYGFVSGDRSHHQTEAIYEVL-- 776

Query: 668 ELISSTALKF 675
           E +S  A  F
Sbjct: 777 EYLSRMAQGF 782

BLAST of Lsi01G017990 vs. NCBI nr
Match: XP_023526509.1 (pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1154.0 bits (2984), Expect = 0.0e+00
Identity = 566/656 (86.28%), Postives = 608/656 (92.68%), Query Frame = 0

Query: 8   QIHAHLILSSGFDTVSIASKLIRLYAKFNDFPSAVSVLNVFPDPEPMLWNSIIKSHFDSG 67
           QIHA+ ILSSGFDTV IASKLIRLYAKFND PSAVSVLN FP  EPMLWNSIIKS FDSG
Sbjct: 19  QIHAYFILSSGFDTVFIASKLIRLYAKFNDLPSAVSVLNAFPHTEPMLWNSIIKSQFDSG 78

Query: 68  LFLSALLLYKSMREVGVEHDGFTFPIVNHVIMSIWVDVVYAGMAHCVGIRMGFSADLYFC 127
           LFLSA++LYK+MREVGVEHDGFTFPI+NHV+MSIWVDVVYAGM HCVGIRMGF +DLYFC
Sbjct: 79  LFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCVGIRMGFGSDLYFC 138

Query: 128 NTMMQVYGKCECLVYARNVFDEMPNRDLVSWTSMISAYVNGGDVVSALDLFEGMRRELEP 187
           NTMM+VY KCECL +AR VFDEMPNRDLVSWTSMISAYVN GD+V AL+LFEGMRR LEP
Sbjct: 139 NTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNSGDIVCALNLFEGMRRVLEP 198

Query: 188 NSVTVMVMLQACCATQNLVLGRLLQCHVVKSGLLFDTGLQNSFLQMYSRLGEEDEVGIFF 247
           NSVT+M MLQACC T++LVLGRL+QC VVK+GLLFD GLQN FL+MYSRLG EDE   FF
Sbjct: 199 NSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMYSRLGGEDEFVCFF 258

Query: 248 SEIHCKNVVSWNILMSFYSSMGDILKVVDTFNKIM-GEVPLSIETLTILISATATSDSGC 307
           SEI CKNVVSWNIL+SFYSS+GDI+K VD F +IM GEVPL IETLTILISAT TS+S C
Sbjct: 259 SEIDCKNVVSWNILISFYSSVGDIVKAVDIFKQIMGGEVPLIIETLTILISATKTSESMC 318

Query: 308 LILGENLHSLAIKSGLYDGILRTSLLDMYAKFGELENSTRLFKGIPNRSIITWGAMMSSF 367
           LILGENLHSLAIK+GLYD ILRTSLLDMYAKFGEL+NSTRLF  IPNRSIITWGAMMSSF
Sbjct: 319 LILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIPNRSIITWGAMMSSF 378

Query: 368 IQNGHFDDAVEIFKQMQTAGLKPSVGIIKHLIDAYAYLGALQLGKAIHCYLIRIYGLEIC 427
           IQNGHFD+AVEIF QMQ AGLKPS+GI+KHLIDAYA+LGALQLG+ IHCYLIRIYGLEIC
Sbjct: 379 IQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRGIHCYLIRIYGLEIC 438

Query: 428 NTHLETSLLNMYGRCGSVASARKCFDLILIKDVVAWTSMIDVYGAHGLGIDALNLFRQMM 487
           NTHLETSL+NMY RCGS+ASARKCFDLI++KDVVAWTSMI+ YGAHG GI+ALNL+  MM
Sbjct: 439 NTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAHGQGINALNLYHHMM 498

Query: 488 SEEVAPNNVTFLSLLSACSHSGLVSEGCEIFYSMRSRFHIKPNLEHYTCFVDLLSRSTRV 547
           SEEVAPN+VTFLSLLSACSHSGLVSEGCEIFYSMRSRF+IKP+LEHYTCFVDLLSRSTRV
Sbjct: 499 SEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYTCFVDLLSRSTRV 558

Query: 548 REAFAITLRMTNLCDGRIWGALMGACRVYGDNKIANYAADRLLELEPDNVGYYTLLSNSQ 607
           REAFAI LRMTNLCDGRIWGALMGACRVYGD KIA YAA RLLELEPDNVGYYTLLSN+Q
Sbjct: 559 REAFAIILRMTNLCDGRIWGALMGACRVYGDTKIAIYAAHRLLELEPDNVGYYTLLSNTQ 618

Query: 608 ASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGTIHGFVSGDRSHNKTNEIYDLL 663
           ASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGTIHGFVSGDRSH KT++IYDLL
Sbjct: 619 ASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGTIHGFVSGDRSHGKTDQIYDLL 674

BLAST of Lsi01G017990 vs. NCBI nr
Match: KAG7033612.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1146.0 bits (2963), Expect = 0.0e+00
Identity = 564/665 (84.81%), Postives = 610/665 (91.73%), Query Frame = 0

Query: 8   QIHAHLILSSGFDTVSIASKLIRLYAKFNDFPSAVSVLNVFPDPEPMLWNSIIKSHFDSG 67
           QIHA+ ILSSGFDTV IASKLIRLY KFND PSAVSVLN FP  EPMLWNSIIKS  DSG
Sbjct: 7   QIHAYFILSSGFDTVFIASKLIRLYVKFNDLPSAVSVLNAFPHTEPMLWNSIIKSQVDSG 66

Query: 68  LFLSALLLYKSMREVGVEHDGFTFPIVNHVIMSIWVDVVYAGMAHCVGIRMGFSADLYFC 127
           LFLSA++LYK+MREVGVEHDGFTFPI+NHV+MSIWVDVVYAGM HCVGIRMGF +DLYFC
Sbjct: 67  LFLSAIMLYKNMREVGVEHDGFTFPILNHVVMSIWVDVVYAGMVHCVGIRMGFGSDLYFC 126

Query: 128 NTMMQVYGKCECLVYARNVFDEMPNRDLVSWTSMISAYVNGGDVVSALDLFEGMRRELEP 187
           NTMM+VY KCECL +AR VFDEMPNRDLVSWTSMISAYVN GD+V AL+LFEGMRR LEP
Sbjct: 127 NTMMEVYAKCECLGHARKVFDEMPNRDLVSWTSMISAYVNVGDIVCALNLFEGMRRVLEP 186

Query: 188 NSVTVMVMLQACCATQNLVLGRLLQCHVVKSGLLFDTGLQNSFLQMYSRLGEEDEVGIFF 247
           NSVT+M MLQACC T++LVLGRL+QC VVK+GLLFD GLQN FL+MYSRLG EDE   FF
Sbjct: 187 NSVTMMAMLQACCVTEDLVLGRLIQCLVVKNGLLFDVGLQNWFLRMYSRLGGEDEFVRFF 246

Query: 248 SEIHCKNVVSWNILMSFYSSMGDILKVVDTFNKIM-GEVPLSIETLTILISATATSDSGC 307
           SEI CKNVVSW+IL+SFYSS+GDI+K VD F +IM GEVPL IETLTILISAT TSDS C
Sbjct: 247 SEIDCKNVVSWDILISFYSSVGDIVKAVDIFKQIMAGEVPLIIETLTILISATKTSDSMC 306

Query: 308 LILGENLHSLAIKSGLYDGILRTSLLDMYAKFGELENSTRLFKGIPNRSIITWGAMMSSF 367
           LILGENLHSLAIK+GLYD ILRTSLLDMYAKFGEL+NSTRLF  IPNRSIITWGAMMSSF
Sbjct: 307 LILGENLHSLAIKTGLYDSILRTSLLDMYAKFGELDNSTRLFNEIPNRSIITWGAMMSSF 366

Query: 368 IQNGHFDDAVEIFKQMQTAGLKPSVGIIKHLIDAYAYLGALQLGKAIHCYLIRIYGLEIC 427
           IQNGHFD+AVEIF QMQ AGLKPS+GI+KHLIDAYA+LGALQLG+ IHCYLIRI GLEIC
Sbjct: 367 IQNGHFDEAVEIFSQMQAAGLKPSLGILKHLIDAYAHLGALQLGRGIHCYLIRICGLEIC 426

Query: 428 NTHLETSLLNMYGRCGSVASARKCFDLILIKDVVAWTSMIDVYGAHGLGIDALNLFRQMM 487
           NTHLETSL+NMY RCGS+ASARKCFDLI++KDVVAWTSMI+ YGAHG GI+ALNL+  MM
Sbjct: 427 NTHLETSLMNMYVRCGSIASARKCFDLIIVKDVVAWTSMIEGYGAHGQGINALNLYHHMM 486

Query: 488 SEEVAPNNVTFLSLLSACSHSGLVSEGCEIFYSMRSRFHIKPNLEHYTCFVDLLSRSTRV 547
           SEEVAPN+VTFLSLLSACSHSGLVSEGCEIFYSMRSRF+IKP+LEHYTCFVDLLSRSTRV
Sbjct: 487 SEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYTCFVDLLSRSTRV 546

Query: 548 REAFAITLRMTNLCDGRIWGALMGACRVYGDNKIANYAADRLLELEPDNVGYYTLLSNSQ 607
           REAFAI LRMTNLCDGRIWGALMGACRVYGDNKIA YAA RLLELEPDNVGYYTLLSN+Q
Sbjct: 547 REAFAIILRMTNLCDGRIWGALMGACRVYGDNKIAIYAAHRLLELEPDNVGYYTLLSNTQ 606

Query: 608 ASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGTIHGFVSGDRSHNKTNEIYDLLAMEL 667
           ASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNG IHGFVSGDRSH+KT++IYDLL +  
Sbjct: 607 ASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGIIHGFVSGDRSHSKTDQIYDLLTLGD 666

Query: 668 ISSTA 672
           +  T+
Sbjct: 667 VRRTS 671

BLAST of Lsi01G017990 vs. NCBI nr
Match: XP_038883286.1 (pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 1143.3 bits (2956), Expect = 0.0e+00
Identity = 561/609 (92.12%), Postives = 582/609 (95.57%), Query Frame = 0

Query: 54  MLWNSIIKSHFDSGLFLSALLLYKSMREVGVEHDGFTFPIVNHVIMSIWVDVVYAGMAHC 113
           MLWNSIIKSHFDSGLFLSALLLYK+MREVGVEHDGFTFPI+NHVIMSIWVDV+YA M HC
Sbjct: 1   MLWNSIIKSHFDSGLFLSALLLYKNMREVGVEHDGFTFPILNHVIMSIWVDVLYAEMVHC 60

Query: 114 VGIRMGFSADLYFCNTMMQVYGKCECLVYARNVFDEMPNRDLVSWTSMISAYVNGGDVVS 173
           VGIRMGF ADLYFCNTMM+VYGKC CLVYAR++FDEMPNRDLVSWTSMISAYVNGGDVV 
Sbjct: 61  VGIRMGFIADLYFCNTMMEVYGKCGCLVYARHMFDEMPNRDLVSWTSMISAYVNGGDVVC 120

Query: 174 ALDLFEGMRRELEPNSVTVMVMLQACCATQNLVLGRLLQCHVVKSGLLFDTGLQNSFLQM 233
           ALDLFE MRRELEPNSVT MVMLQACCATQN VLGR LQCHVVK+GLL D GL+NSFL+M
Sbjct: 121 ALDLFEAMRRELEPNSVTAMVMLQACCATQNFVLGRQLQCHVVKNGLLLDIGLRNSFLRM 180

Query: 234 YSRLGEEDEVGIFFSEIHCKNVVSWNILMSFYSSMGDILKVVDTFNKIMGEVPLSIETLT 293
           YSRLG EDEVG+FFSEI CKNVVSWNILMSFYSS+G+ILKVVD FNKIMGEV LSIETLT
Sbjct: 181 YSRLGGEDEVGVFFSEIDCKNVVSWNILMSFYSSVGNILKVVDIFNKIMGEVTLSIETLT 240

Query: 294 ILISATATSDSGCLILGENLHSLAIKSGLYDGILRTSLLDMYAKFGELENSTRLFKGIPN 353
           ILISATATSDSGCLILGENLHSLAIKSGLYD IL+TSLLDMYAKFGELENS +LFK IPN
Sbjct: 241 ILISATATSDSGCLILGENLHSLAIKSGLYDSILQTSLLDMYAKFGELENSAKLFKEIPN 300

Query: 354 RSIITWGAMMSSFIQNGHFDDAVEIFKQMQTAGLKPSVGIIKHLIDAYAYLGALQLGKAI 413
           RSIITWGAMMSSFIQNGHFD+AVEIFKQMQ AGLKPSVG++KHLIDAYAYLGALQLGKAI
Sbjct: 301 RSIITWGAMMSSFIQNGHFDEAVEIFKQMQAAGLKPSVGVLKHLIDAYAYLGALQLGKAI 360

Query: 414 HCYLIRIYGLEICNTHLETSLLNMYGRCGSVASARKCFDLILIKDVVAWTSMIDVYGAHG 473
           HCYLIRIYGLEICNTHLETSLLNMYGRCGS+ASARKCFDLIL KDVV WTSMIDVYGAHG
Sbjct: 361 HCYLIRIYGLEICNTHLETSLLNMYGRCGSIASARKCFDLILTKDVVVWTSMIDVYGAHG 420

Query: 474 LGIDALNLFRQMMSEEVAPNNVTFLSLLSACSHSGLVSEGCEIFYSMRSRFHIKPNLEHY 533
           LGIDALNLF QMMSEEVAPN+VTFLSLLSACSHSGLVSEGCEIFYSMRS F IKP+LEHY
Sbjct: 421 LGIDALNLFHQMMSEEVAPNSVTFLSLLSACSHSGLVSEGCEIFYSMRSSFDIKPDLEHY 480

Query: 534 TCFVDLLSRSTRVREAFAITLRMTNLCDGRIWGALMGACRVYGDNKIANYAADRLLELEP 593
           TCFVDLLSRSTRVREAFAI LRMTNL DGRIWGALMGACRVYGDNKIANYAA RLLELEP
Sbjct: 481 TCFVDLLSRSTRVREAFAIILRMTNLRDGRIWGALMGACRVYGDNKIANYAAHRLLELEP 540

Query: 594 DNVGYYTLLSNSQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGTIHGFVSGDRSHN 653
           DNVGYYTLLSN+QASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGTIHGFVSGDRSHN
Sbjct: 541 DNVGYYTLLSNAQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGTIHGFVSGDRSHN 600

Query: 654 KTNEIYDLL 663
           KTNEIYDLL
Sbjct: 601 KTNEIYDLL 609

BLAST of Lsi01G017990 vs. NCBI nr
Match: XP_008457591.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g35130, chloroplastic [Cucumis melo] >XP_008457593.1 PREDICTED: pentatricopeptide repeat-containing protein At4g35130, chloroplastic [Cucumis melo] >XP_016902177.1 PREDICTED: pentatricopeptide repeat-containing protein At4g35130, chloroplastic [Cucumis melo] >XP_016902178.1 PREDICTED: pentatricopeptide repeat-containing protein At4g35130, chloroplastic [Cucumis melo] >XP_016902179.1 PREDICTED: pentatricopeptide repeat-containing protein At4g35130, chloroplastic [Cucumis melo] >XP_016902180.1 PREDICTED: pentatricopeptide repeat-containing protein At4g35130, chloroplastic [Cucumis melo])

HSP 1 Score: 1108.6 bits (2866), Expect = 0.0e+00
Identity = 547/609 (89.82%), Postives = 571/609 (93.76%), Query Frame = 0

Query: 54  MLWNSIIKSHFDSGLFLSALLLYKSMREVGVEHDGFTFPIVNHVIMSIWVDVVYAGMAHC 113
           MLWN++IKSHFDSGLF SALLLYK+MREV VEHDGFT PIVN VI+SIWVDVVY GM HC
Sbjct: 1   MLWNNVIKSHFDSGLFHSALLLYKNMREVRVEHDGFTLPIVNQVILSIWVDVVYGGMVHC 60

Query: 114 VGIRMGFSADLYFCNTMMQVYGKCECLVYARNVFDEMPNRDLVSWTSMISAYVNGGDVVS 173
           VGIRMGFS+DLYFCNTMM+VYGKC CLV AR+VFDEMPNRDLVSWTSMISAYV GGDV  
Sbjct: 61  VGIRMGFSSDLYFCNTMMEVYGKCGCLVSARDVFDEMPNRDLVSWTSMISAYVKGGDVFC 120

Query: 174 ALDLFEGMRRELEPNSVTVMVMLQACCATQNLVLGRLLQCHVVKSGLLFDTGLQNSFLQM 233
           ALD+FEGMRRELEPNSVTV+VMLQACCATQNLVLGRLLQC+VVK+GLLFDTGLQNSFL+M
Sbjct: 121 ALDIFEGMRRELEPNSVTVIVMLQACCATQNLVLGRLLQCYVVKNGLLFDTGLQNSFLRM 180

Query: 234 YSRLGEEDEVGIFFSEIHCKNVVSWNILMSFYSSMGDILKVVDTFNKIMGEVPLSIETLT 293
           YSRLG EDEV  FFSEI  KNVVSWNILMSFYSSMGDI+KVVD  NKIMGEVPLSIETLT
Sbjct: 181 YSRLGGEDEVVAFFSEIDFKNVVSWNILMSFYSSMGDIVKVVDILNKIMGEVPLSIETLT 240

Query: 294 ILISATATSDSGCLILGENLHSLAIKSGLYDGILRTSLLDMYAKFGELENSTRLFKGIPN 353
           ILIS  ATSDSGCLILGENLHSLAIKSGLYD IL TSLLDMYAKFGELENSTRLFK IPN
Sbjct: 241 ILISGIATSDSGCLILGENLHSLAIKSGLYDDILCTSLLDMYAKFGELENSTRLFKEIPN 300

Query: 354 RSIITWGAMMSSFIQNGHFDDAVEIFKQMQTAGLKPSVGIIKHLIDAYAYLGALQLGKAI 413
           RSIITWGAMMSSFIQNGHFDDAV+IFKQMQ AGLKPSVGI+KHLIDAYAYLGALQLGKAI
Sbjct: 301 RSIITWGAMMSSFIQNGHFDDAVDIFKQMQVAGLKPSVGILKHLIDAYAYLGALQLGKAI 360

Query: 414 HCYLIRIYGLEICNTHLETSLLNMYGRCGSVASARKCFDLILIKDVVAWTSMIDVYGAHG 473
           HC+LIRIYGL +CNT LETS+LNMY RCGS+ASARKCFDLILIKDVVAWTSMI+ YGAHG
Sbjct: 361 HCHLIRIYGLVVCNTRLETSVLNMYVRCGSIASARKCFDLILIKDVVAWTSMIEGYGAHG 420

Query: 474 LGIDALNLFRQMMSEEVAPNNVTFLSLLSACSHSGLVSEGCEIFYSMRSRFHIKPNLEHY 533
           LGIDALNLF QM SEEV PNNVTFLSLLSACSHSGLVSEGC IFYSMRSRF+IKP+LEHY
Sbjct: 421 LGIDALNLFHQMTSEEVTPNNVTFLSLLSACSHSGLVSEGCGIFYSMRSRFNIKPDLEHY 480

Query: 534 TCFVDLLSRSTRVREAFAITLRMTNLCDGRIWGALMGACRVYGDNKIANYAADRLLELEP 593
           TCFVDLLSRSTRVREAFAI LRMTNLCDGRIWGALMGACRVYGDNKIANYAA RLLELEP
Sbjct: 481 TCFVDLLSRSTRVREAFAIILRMTNLCDGRIWGALMGACRVYGDNKIANYAAHRLLELEP 540

Query: 594 DNVGYYTLLSNSQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGTIHGFVSGDRSHN 653
           DNVGYYTLLSNSQASVGQWHE EKLRS+VYEK+L KKPGWSFIELNGTIHGFVSGDRSH 
Sbjct: 541 DNVGYYTLLSNSQASVGQWHEAEKLRSLVYEKNLAKKPGWSFIELNGTIHGFVSGDRSHY 600

Query: 654 KTNEIYDLL 663
           K NEIYDLL
Sbjct: 601 KANEIYDLL 609

BLAST of Lsi01G017990 vs. NCBI nr
Match: XP_031739775.1 (pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Cucumis sativus] >XP_031739776.1 pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Cucumis sativus] >XP_031739777.1 pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Cucumis sativus] >XP_031739778.1 pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Cucumis sativus] >XP_031739779.1 pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Cucumis sativus] >XP_031739780.1 pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Cucumis sativus] >XP_031739781.1 pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Cucumis sativus] >XP_031739782.1 pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Cucumis sativus] >XP_031739783.1 pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Cucumis sativus] >XP_031739784.1 pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Cucumis sativus] >XP_031739785.1 pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Cucumis sativus] >XP_031739786.1 pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Cucumis sativus] >XP_031739787.1 pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Cucumis sativus] >XP_031739788.1 pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Cucumis sativus] >KGN54049.2 hypothetical protein Csa_019111 [Cucumis sativus])

HSP 1 Score: 1099.3 bits (2842), Expect = 0.0e+00
Identity = 539/609 (88.51%), Postives = 569/609 (93.43%), Query Frame = 0

Query: 54  MLWNSIIKSHFDSGLFLSALLLYKSMREVGVEHDGFTFPIVNHVIMSIWVDVVYAGMAHC 113
           MLWNSIIKS+FDSGLF SALLLYK+MREV VEHDGFT PIVN V MSIWVDV YAGM HC
Sbjct: 1   MLWNSIIKSYFDSGLFHSALLLYKNMREVRVEHDGFTLPIVNQVTMSIWVDVAYAGMVHC 60

Query: 114 VGIRMGFSADLYFCNTMMQVYGKCECLVYARNVFDEMPNRDLVSWTSMISAYVNGGDVVS 173
           VGIRMGFS+DLYFCNTMM+VYGKC C+V AR+VFDEMPNRDLVSWTSMISAYVNGGDV  
Sbjct: 61  VGIRMGFSSDLYFCNTMMEVYGKCGCMVSARDVFDEMPNRDLVSWTSMISAYVNGGDVFC 120

Query: 174 ALDLFEGMRRELEPNSVTVMVMLQACCATQNLVLGRLLQCHVVKSGLLFDTGLQNSFLQM 233
           ALD+FEGMRRELEPNSVTVMVMLQACCATQ LVLGRLLQC+VVK+GLLFDT LQNSFL+M
Sbjct: 121 ALDIFEGMRRELEPNSVTVMVMLQACCATQYLVLGRLLQCYVVKNGLLFDTHLQNSFLRM 180

Query: 234 YSRLGEEDEVGIFFSEIHCKNVVSWNILMSFYSSMGDILKVVDTFNKIMGEVPLSIETLT 293
           YSRLG +DE G+FFSEI  KN VSWNILMSFYSSMGDI+KVVD  NKIMGEVPLSIETLT
Sbjct: 181 YSRLGRQDEFGVFFSEIDFKNAVSWNILMSFYSSMGDIVKVVDILNKIMGEVPLSIETLT 240

Query: 294 ILISATATSDSGCLILGENLHSLAIKSGLYDGILRTSLLDMYAKFGELENSTRLFKGIPN 353
           ILIS  ATSDS CL+LGENLHSLAIKSGLYDGIL TSLL MYAKFGELENST LFK IPN
Sbjct: 241 ILISGIATSDSRCLMLGENLHSLAIKSGLYDGILCTSLLGMYAKFGELENSTSLFKEIPN 300

Query: 354 RSIITWGAMMSSFIQNGHFDDAVEIFKQMQTAGLKPSVGIIKHLIDAYAYLGALQLGKAI 413
           RSI+TWGAMMSSFIQNGHFDDAV+IFKQMQ AGLKPSVGI+KHLIDAYA+LGALQLGKAI
Sbjct: 301 RSIVTWGAMMSSFIQNGHFDDAVDIFKQMQVAGLKPSVGILKHLIDAYAFLGALQLGKAI 360

Query: 414 HCYLIRIYGLEICNTHLETSLLNMYGRCGSVASARKCFDLILIKDVVAWTSMIDVYGAHG 473
           HC LIRIYG  +CNT LETS+LNMY RCGS+ASARKCFDLI+IKDVVAWTSMI+ YGAHG
Sbjct: 361 HCCLIRIYGFVVCNTRLETSVLNMYVRCGSIASARKCFDLIIIKDVVAWTSMIEGYGAHG 420

Query: 474 LGIDALNLFRQMMSEEVAPNNVTFLSLLSACSHSGLVSEGCEIFYSMRSRFHIKPNLEHY 533
           LG+DALNLF QM SEEV PNNVTFLSLLSACSHSGLVSEGCEIFYSMRSRF+IKP+LEHY
Sbjct: 421 LGVDALNLFHQMTSEEVTPNNVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHY 480

Query: 534 TCFVDLLSRSTRVREAFAITLRMTNLCDGRIWGALMGACRVYGDNKIANYAADRLLELEP 593
           TCFVDLLSRSTRVREAFAI LRMT+LCDGRIWGALMGACRVYGDNKIANYAA RLLELEP
Sbjct: 481 TCFVDLLSRSTRVREAFAIILRMTSLCDGRIWGALMGACRVYGDNKIANYAAHRLLELEP 540

Query: 594 DNVGYYTLLSNSQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGTIHGFVSGDRSHN 653
           DNVGYYTLLSNSQASVGQWHE EKLRS+VYEKDLVKKPGWSFIELNGTIHGFVSGDRSHN
Sbjct: 541 DNVGYYTLLSNSQASVGQWHEAEKLRSLVYEKDLVKKPGWSFIELNGTIHGFVSGDRSHN 600

Query: 654 KTNEIYDLL 663
           +TNEIYD+L
Sbjct: 601 RTNEIYDVL 609

BLAST of Lsi01G017990 vs. TAIR 10
Match: AT4G35130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 401.4 bits (1030), Expect = 1.7e-111
Identity = 218/640 (34.06%), Postives = 361/640 (56.41%), Query Frame = 0

Query: 26  SKLIRLYAKFNDFPSAVSVLNVFPDPEPMLWNSIIKSHFDSGLFLSALLLYKSMREVGVE 85
           ++ +R +A       A+ + +     +  LWN +IK     GL++ A+  Y  M   GV+
Sbjct: 68  TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVK 127

Query: 86  HDGFTFPIVNHVIMSIWVDVVYAGMAHCVGIRMGFSADLYFCNTMMQVYGKCECLVYARN 145
            D FT+P V   +  I   +      H + I++GF +D+Y CN+++ +Y K  C   A  
Sbjct: 128 ADTFTYPFVIKSVAGI-SSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEK 187

Query: 146 VFDEMPNRDLVSWTSMISAYVNGGDVVSALDLFEGMRR-ELEPNSVTVMVMLQACCATQN 205
           VF+EMP RD+VSW SMIS Y+  GD  S+L LF+ M +   +P+  + M  L AC    +
Sbjct: 188 VFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYS 247

Query: 206 LVLGRLLQCHVVKSGL-LFDTGLQNSFLQMYSRLGEEDEVGIFFSEIHCKNVVSWNILMS 265
             +G+ + CH V+S +   D  +  S L MYS+ GE       F+ +  +N+V+WN+++ 
Sbjct: 248 PKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIG 307

Query: 266 FYSSMGDILKVVDTFNKIMGEVPLSIETLTILISATATSDSGCLILGENLHSLAIKSG-L 325
            Y+  G +      F K+  +  L  + +T +    A++    ++ G  +H  A++ G L
Sbjct: 308 CYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFL 367

Query: 326 YDGILRTSLLDMYAKFGELENSTRLFKGIPNRSIITWGAMMSSFIQNGHFDDAVEIFKQM 385
              +L T+L+DMY + G+L+++  +F  +  +++I+W +++++++QNG    A+E+F+++
Sbjct: 368 PHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQEL 427

Query: 386 QTAGLKPSVGIIKHLIDAYAYLGALQLGKAIHCYLIRIYGLEICNTHLETSLLNMYGRCG 445
             + L P    I  ++ AYA   +L  G+ IH Y+++       NT +  SL++MY  CG
Sbjct: 428 WDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVK--SRYWSNTIILNSLVHMYAMCG 487

Query: 446 SVASARKCFDLILIKDVVAWTSMIDVYGAHGLGIDALNLFRQMMSEEVAPNNVTFLSLLS 505
            +  ARKCF+ IL+KDVV+W S+I  Y  HG G  ++ LF +M++  V PN  TF SLL+
Sbjct: 488 DLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLA 547

Query: 506 ACSHSGLVSEGCEIFYSMRSRFHIKPNLEHYTCFVDLLSRSTRVREAFAITLRMTNLCDG 565
           ACS SG+V EG E F SM+  + I P +EHY C +DL+ R+     A      M  +   
Sbjct: 548 ACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTA 607

Query: 566 RIWGALMGACRVYGDNKIANYAADRLLELEPDNVGYYTLLSNSQASVGQWHEVEKLRSVV 625
           RIWG+L+ A R + D  IA +AA+++ ++E DN G Y LL N  A  G+W +V +++ ++
Sbjct: 608 RIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLM 667

Query: 626 YEKDLVKKPGWSFIELNGTIHGFVSGDRSHNKTNEIYDLL 663
             K + +    S +E  G  H F +GDRSH  TN+IY++L
Sbjct: 668 ESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVL 700

BLAST of Lsi01G017990 vs. TAIR 10
Match: AT3G63370.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 364.4 bits (934), Expect = 2.2e-100
Identity = 213/664 (32.08%), Postives = 367/664 (55.27%), Query Frame = 0

Query: 7   TQIHAHLILSSGFDTVSIASKLIRLYAKFNDFPSAVSVLNVFPDP-EPMLWNSIIKSHFD 66
           +++H+ L+      T  I + L+ +YAK +D  +A  + + F +  + +LWNSI+ S+  
Sbjct: 202 SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYST 261

Query: 67  SGLFLSALLLYKSMREVGVEHDGFTFPIVNHVIMSIWVDVVYAGM-AHCVGIRMG-FSAD 126
           SG  L  L L++ M   G   + +T  IV+ +           G   H   ++    S++
Sbjct: 262 SGKSLETLELFREMHMTGPAPNSYT--IVSALTACDGFSYAKLGKEIHASVLKSSTHSSE 321

Query: 127 LYFCNTMMQVYGKCECLVYARNVFDEMPNRDLVSWTSMISAYVNGGDVVSALDLFEGM-R 186
           LY CN ++ +Y +C  +  A  +  +M N D+V+W S+I  YV       AL+ F  M  
Sbjct: 322 LYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIA 381

Query: 187 RELEPNSVTVMVMLQACCATQNLVLGRLLQCHVVKSGLLFDTGLQ--NSFLQMYSRLGEE 246
              + + V++  ++ A     NL+ G  L  +V+K G  +D+ LQ  N+ + MYS+    
Sbjct: 382 AGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHG--WDSNLQVGNTLIDMYSKCNLT 441

Query: 247 DEVGIFFSEIHCKNVVSWNILMSFYSSMGDILKVVDTFNKIMGEVPLSIETLTILISATA 306
             +G  F  +H K+++SW  +++ Y+     ++ ++ F  +  +  + I+ + +     A
Sbjct: 442 CYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDV-AKKRMEIDEMILGSILRA 501

Query: 307 TSDSGCLILGENLHSLAIKSGLYDGILRTSLLDMYAKFGELENSTRLFKGIPNRSIITWG 366
           +S    +++ + +H   ++ GL D +++  L+D+Y K   +  +TR+F+ I  + +++W 
Sbjct: 502 SSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWT 561

Query: 367 AMMSSFIQNGHFDDAVEIFKQMQTAGLKPSVGIIKHLIDAYAYLGALQLGKAIHCYLIRI 426
           +M+SS   NG+  +AVE+F++M   GL      +  ++ A A L AL  G+ IHCYL+R 
Sbjct: 562 SMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRK 621

Query: 427 -YGLEICNTHLETSLLNMYGRCGSVASARKCFDLILIKDVVAWTSMIDVYGAHGLGIDAL 486
            + LE     +  ++++MY  CG + SA+  FD I  K ++ +TSMI+ YG HG G  A+
Sbjct: 622 GFCLE---GSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAV 681

Query: 487 NLFRQMMSEEVAPNNVTFLSLLSACSHSGLVSEGCEIFYSMRSRFHIKPNLEHYTCFVDL 546
            LF +M  E V+P++++FL+LL ACSH+GL+ EG      M   + ++P  EHY C VD+
Sbjct: 682 ELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDM 741

Query: 547 LSRSTRVREAFAITLRMTNLCDGRIWGALMGACRVYGDNKIANYAADRLLELEPDNVGYY 606
           L R+  V EAF     M       +W AL+ ACR + + +I   AA RLLELEP N G  
Sbjct: 742 LGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNL 801

Query: 607 TLLSNSQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGTIHGFVSGDRSHNKTNEIY 664
            L+SN  A  G+W++VEK+R+ +    + K PG S+IE++G +H F + D+SH ++ EIY
Sbjct: 802 VLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIY 857

BLAST of Lsi01G017990 vs. TAIR 10
Match: AT4G33990.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 364.0 bits (933), Expect = 2.9e-100
Identity = 207/662 (31.27%), Postives = 361/662 (54.53%), Query Frame = 0

Query: 9   IHAHLILSSGFDTVSIASKLIRLYAKFNDFPSAVSVLNVFPDPEPMLWNSIIKSHFDSGL 68
           +HA L++S     V I++KL+ LY    +   A    +   + +   WN +I  +  +G 
Sbjct: 73  LHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGN 132

Query: 69  FLSALLLYK-SMREVGVEHDGFTFPIVNHVIMSIWVDVVYAGMAHCVGIRMGFSADLYFC 128
               +  +   M   G+  D  TFP V    +     V+     HC+ ++ GF  D+Y  
Sbjct: 133 SSEVIRCFSLFMLSSGLTPDYRTFPSV----LKACRTVIDGNKIHCLALKFGFMWDVYVA 192

Query: 129 NTMMQVYGKCECLVYARNVFDEMPNRDLVSWTSMISAYVNGGDVVSALDLFEGMRRELEP 188
            +++ +Y + + +  AR +FDEMP RD+ SW +MIS Y   G+   AL L  G+R     
Sbjct: 193 ASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR---AM 252

Query: 189 NSVTVMVMLQACCATQNLVLGRLLQCHVVKSGLLFDTGLQNSFLQMYSRLGEEDEVGIFF 248
           +SVTV+ +L AC    +   G  +  + +K GL  +  + N  + +Y+  G   +    F
Sbjct: 253 DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVF 312

Query: 249 SEIHCKNVVSWNILMSFYSSMGDILKVVDTFNKIMGEVPLSIETLTILISATATSDSGCL 308
             ++ ++++SWN ++  Y      L+ +  F + M    +  + LT++  A+  S  G +
Sbjct: 313 DRMYVRDLISWNSIIKAYELNEQPLRAISLFQE-MRLSRIQPDCLTLISLASILSQLGDI 372

Query: 309 ILGENLHSLAIKSG--LYDGILRTSLLDMYAKFGELENSTRLFKGIPNRSIITWGAMMSS 368
               ++    ++ G  L D  +  +++ MYAK G ++++  +F  +PN  +I+W  ++S 
Sbjct: 373 RACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISG 432

Query: 369 FIQNGHFDDAVEIFKQMQTAG-LKPSVGIIKHLIDAYAYLGALQLGKAIHCYLIRIYGLE 428
           + QNG   +A+E++  M+  G +  + G    ++ A +  GAL+ G  +H  L++  GL 
Sbjct: 433 YAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLK-NGLY 492

Query: 429 ICNTHLETSLLNMYGRCGSVASARKCFDLILIKDVVAWTSMIDVYGAHGLGIDALNLFRQ 488
           + +  + TSL +MYG+CG +  A   F  I   + V W ++I  +G HG G  A+ LF++
Sbjct: 493 L-DVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKE 552

Query: 489 MMSEEVAPNNVTFLSLLSACSHSGLVSEGCEIFYSMRSRFHIKPNLEHYTCFVDLLSRST 548
           M+ E V P+++TF++LLSACSHSGLV EG   F  M++ + I P+L+HY C VD+  R+ 
Sbjct: 553 MLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAG 612

Query: 549 RVREAFAITLRMTNLCDGRIWGALMGACRVYGDNKIANYAADRLLELEPDNVGYYTLLSN 608
           ++  A      M+   D  IWGAL+ ACRV+G+  +   A++ L E+EP++VGY+ LLSN
Sbjct: 613 QLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSN 672

Query: 609 SQASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGTIHGFVSGDRSHNKTNEIY-DLLA 666
             AS G+W  V+++RS+ + K L K PGWS +E++  +  F +G+++H    E+Y +L A
Sbjct: 673 MYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTA 724

BLAST of Lsi01G017990 vs. TAIR 10
Match: AT1G69350.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 363.2 bits (931), Expect = 5.0e-100
Identity = 202/657 (30.75%), Postives = 365/657 (55.56%), Query Frame = 0

Query: 8   QIHAHLILSSGFDTVSIASKLIRLYAKFNDFPSAVSVLNVFPDPEPMLWNSIIKSHFDSG 67
           ++H  +I     D   I + L+ +Y +  +   A  V +  P  + + W++++ S  ++G
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENG 181

Query: 68  LFLSALLLYKSMREVGVEHDGFTFPIVNHVIMSIWVDVVYAGMAHCVGIRMGFSADLYFC 127
             + AL ++K M + GVE D  T   V      +   +  A   H    R  F  D   C
Sbjct: 182 EVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGC-LRIARSVHGQITRKMFDLDETLC 241

Query: 128 NTMMQVYGKCECLVYARNVFDEMPNRDLVSWTSMISAYVNGGDVVSALDLF-EGMRRELE 187
           N+++ +Y KC  L+ +  +F+++  ++ VSWT+MIS+Y  G     AL  F E ++  +E
Sbjct: 242 NSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIE 301

Query: 188 PNSVTVMVMLQACCATQNLVLGRLLQCHVVKSGLLFD-TGLQNSFLQMYSRLGEEDEVGI 247
           PN VT+  +L +C     +  G+ +    V+  L  +   L  + +++Y+  G+  +   
Sbjct: 302 PNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCET 361

Query: 248 FFSEIHCKNVVSWNILMSFYSSMGDILKVVDTFNKIMGEVPLSIETLTILISATATSDSG 307
               +  +N+V+WN L+S Y+  G +++ +  F +++ +  +  +  T+  S +A  ++G
Sbjct: 362 VLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQ-RIKPDAFTLASSISACENAG 421

Query: 308 CLILGENLHSLAIKSGLYDGILRTSLLDMYAKFGELENSTRLFKGIPNRSIITWGAMMSS 367
            + LG+ +H   I++ + D  ++ SL+DMY+K G +++++ +F  I +RS++TW +M+  
Sbjct: 422 LVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCG 481

Query: 368 FIQNGHFDDAVEIFKQMQTAGLKPSVGIIKHLIDAYAYLGALQLGKAIHCYLIRIYGLEI 427
           F QNG+  +A+ +F  M  + L+ +      +I A + +G+L+ GK +H  LI I GL+ 
Sbjct: 482 FSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLI-ISGLK- 541

Query: 428 CNTHLETSLLNMYGRCGSVASARKCFDLILIKDVVAWTSMIDVYGAHGLGIDALNLFRQM 487
            +   +T+L++MY +CG + +A   F  +  + +V+W+SMI+ YG HG    A++ F QM
Sbjct: 542 -DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQM 601

Query: 488 MSEEVAPNNVTFLSLLSACSHSGLVSEGCEIFYSMRSRFHIKPNLEHYTCFVDLLSRSTR 547
           +     PN V F+++LSAC HSG V EG + ++++   F + PN EH+ CF+DLLSRS  
Sbjct: 602 VESGTKPNEVVFMNVLSACGHSGSVEEG-KYYFNLMKSFGVSPNSEHFACFIDLLSRSGD 661

Query: 548 VREAFAITLRMTNLCDGRIWGALMGACRVYGDNKIANYAADRLLELEPDNVGYYTLLSNS 607
           ++EA+     M  L D  +WG+L+  CR++    I     + L ++  D+ GYYTLLSN 
Sbjct: 662 LKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNI 721

Query: 608 QASVGQWHEVEKLRSVVYEKDLVKKPGWSFIELNGTIHGFVSGDRSHNKTNEIYDLL 663
            A  G+W E  +LRS +   +L K PG+S IE++  +  F +G+ +  +T+EIY  L
Sbjct: 722 YAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFL 772

BLAST of Lsi01G017990 vs. TAIR 10
Match: AT3G03580.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 362.5 bits (929), Expect = 8.5e-100
Identity = 207/665 (31.13%), Postives = 365/665 (54.89%), Query Frame = 0

Query: 14  ILSSGFDT-VSIASKLIRLYAKFNDFPSAVSVLNVFPDPEPMLWNSIIKSHFDSGLFLSA 73
           IL  GF++ + + + L+ +Y++      A  V +  P  + + WNS+I  +   G +  A
Sbjct: 132 ILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191

Query: 74  LLLYKSMREVGVEHDGFTFPIVNHVIMSIWVDVVYAGMAHCVGIRMGFSADLYFCNTMMQ 133
           L +Y  ++   +  D FT   V     ++ V     G+ H   ++ G ++ +   N ++ 
Sbjct: 192 LEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGL-HGFALKSGVNSVVVVNNGLVA 251

Query: 134 VYGKCECLVYARNVFDEMPNRDLVSWTSMISAYVNGGDVVSALDLFEGMRRELEPNSVTV 193
           +Y K      AR VFDEM  RD VS+ +MI  Y+    V  ++ +F     + +P+ +TV
Sbjct: 252 MYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTV 311

Query: 194 MVMLQACCATQNLVLGRLLQCHVVKSGLLFDTGLQNSFLQMYSRLGEEDEVGIFFSEIHC 253
             +L+AC   ++L L + +  +++K+G + ++ ++N  + +Y++ G+       F+ + C
Sbjct: 312 SSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMEC 371

Query: 254 KNVVSWNILMSFYSSMGDILKVVDTFNKIMGEVPLSIETLTILISATATSDSGCLILGEN 313
           K+ VSWN ++S Y   GD+++ +  F K+M  +    + +T L+  + ++    L  G+ 
Sbjct: 372 KDTVSWNSIISGYIQSGDLMEAMKLF-KMMMIMEEQADHITYLMLISVSTRLADLKFGKG 431

Query: 314 LHSLAIKSGL-YDGILRTSLLDMYAKFGELENSTRLFKGIPNRSIITWGAMMSSFIQNGH 373
           LHS  IKSG+  D  +  +L+DMYAK GE+ +S ++F  +     +TW  ++S+ ++ G 
Sbjct: 432 LHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGD 491

Query: 374 FDDAVEIFKQMQTAGLKPSVGIIKHLIDAYAYLGALQLGKAIHCYLIRIYGLEICNTHLE 433
           F   +++  QM+ + + P +      +   A L A +LGK IHC L+R +G E     + 
Sbjct: 492 FATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR-FGYE-SELQIG 551

Query: 434 TSLLNMYGRCGSVASARKCFDLILIKDVVAWTSMIDVYGAHGLGIDALNLFRQMMSEEVA 493
            +L+ MY +CG + ++ + F+ +  +DVV WT MI  YG +G G  AL  F  M    + 
Sbjct: 552 NALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIV 611

Query: 494 PNNVTFLSLLSACSHSGLVSEGCEIFYSMRSRFHIKPNLEHYTCFVDLLSRSTRVREAFA 553
           P++V F++++ ACSHSGLV EG   F  M++ + I P +EHY C VDLLSRS ++ +A  
Sbjct: 612 PDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEE 671

Query: 554 ITLRMTNLCDGRIWGALMGACRVYGDNKIANYAADRLLELEPDNVGYYTLLSNSQASVGQ 613
               M    D  IW +++ ACR  GD + A   + R++EL PD+ GY  L SN+ A++ +
Sbjct: 672 FIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRK 731

Query: 614 WHEVEKLRSVVYEKDLVKKPGWSFIELNGTIHGFVSGDRSHNKTNEIYDLLAMELISSTA 673
           W +V  +R  + +K + K PG+S+IE+   +H F SGD S  ++  IY   ++E++ S  
Sbjct: 732 WDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYK--SLEILYSLM 790

Query: 674 LKFGF 677
            K G+
Sbjct: 792 AKEGY 790

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
O496192.3e-11034.06Pentatricopeptide repeat-containing protein At4g35130, chloroplastic OS=Arabidop... [more]
Q9M1V33.1e-9932.08Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidop... [more]
O817674.1e-9931.27Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX... [more]
Q9C5077.0e-9930.75Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS... [more]
Q9SS601.2e-9831.13Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A1S3C6I70.0e+0089.82pentatricopeptide repeat-containing protein At4g35130, chloroplastic OS=Cucumis ... [more]
A0A6J1EYH52.8e-31085.74pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like OS=Cuc... [more]
A0A6J1HTH34.9e-30584.92pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like OS=Cuc... [more]
A0A6J1DKA11.4e-29984.07pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like OS=Mom... [more]
A0A6P5TSX76.4e-21256.57pentatricopeptide repeat-containing protein At4g19191, mitochondrial-like OS=Pru... [more]
Match NameE-valueIdentityDescription
XP_023526509.10.0e+0086.28pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Cucur... [more]
KAG7033612.10.0e+0084.81Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
XP_038883286.10.0e+0092.12pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Benin... [more]
XP_008457591.10.0e+0089.82PREDICTED: pentatricopeptide repeat-containing protein At4g35130, chloroplastic ... [more]
XP_031739775.10.0e+0088.51pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Cucum... [more]
Match NameE-valueIdentityDescription
AT4G35130.11.7e-11134.06Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G63370.12.2e-10032.08Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G33990.12.9e-10031.27Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G69350.15.0e-10030.75Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G03580.18.5e-10031.13Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 17..101
e-value: 2.9E-6
score: 28.7
coord: 320..412
e-value: 2.4E-15
score: 58.3
coord: 209..305
e-value: 7.0E-8
score: 34.0
coord: 110..208
e-value: 7.7E-22
score: 79.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 427..651
e-value: 8.4E-32
score: 112.7
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 56..84
e-value: 0.012
score: 15.8
coord: 127..153
e-value: 0.0074
score: 16.5
coord: 256..282
e-value: 0.033
score: 14.4
coord: 357..386
e-value: 1.3E-6
score: 28.3
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 457..505
e-value: 2.0E-9
score: 37.5
coord: 154..200
e-value: 5.7E-10
score: 39.3
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 495..529
e-value: 3.9E-4
score: 18.4
coord: 156..183
e-value: 9.2E-6
score: 23.5
coord: 55..87
e-value: 0.0013
score: 16.8
coord: 357..391
e-value: 8.2E-9
score: 33.1
coord: 460..493
e-value: 2.4E-5
score: 22.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 154..184
score: 9.909073
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 355..389
score: 12.638436
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 52..86
score: 8.506026
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 458..492
score: 10.676364
NoneNo IPR availablePANTHERPTHR47928REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 6..657
NoneNo IPR availablePANTHERPTHR47928:SF75REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 6..657

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G017990.1Lsi01G017990.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding