Lsi01G017430 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G017430
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chr01: 16241303 .. 16243429 (-)
RNA-Seq Expression	Lsi01G017430
Synteny	Lsi01G017430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCTCTGGATTAATGTTTTTCCGTCTAGTTCTGAATCGTTTCTATAGTTCTACTCTTGGAATTTCATCTAATTCTCTTATTGCCCGGTATTCTCGATTGGGTCAAATCGAGAAGGCTCGGGCTGTGTTCGATGAAATGCGTGACAAAAGCATCGTTTCATGGAACTCAATTGTTGCTGGCTACTTTCAGAACAATCGGCCTGTGGAAGCCCAGAACATGTTTGATAAAATGTCTGAGAGGAATACTATATCTTGGAATGGTTTGATTTCTGGGTATATTAAGAATGGGATGATCAATGAAGCTAGGAAAGTGTTTGATAGAATGCCTGAGAGGAATGTTGTTTCGTGGACTGCAATGGTTAGGGGGTATGTGAAGCAGGGTATGATTTCTGAGGCAGAGACACTTTTTTGGCAAATGCCTGAAAAGAATGTAGTATCTTGGACGGTGATGTTGGGTGGCCTTATTCAAGAACGTCGGATTGATGAGGCTTGTAGGCTTTTCGATATGATGCCTGAGAAGGATGTGGTGGCAAGAACTAATATGATTGGAGGGTATTGCCAAGAAGGCCGTTTAGTGGAAGCTCGCAGGCTTTTCGATGAGATGCCTCGTCGAAATGTTGTGTCTTGGACTATGATGATAACAGGATATGTGCAGAATCAACAAGTGGATATTGCTAGAAAGCTGTTTGAAGTCATGCCAGAGAAAAATGAGGTTTCATGGACCGCTATGCTGATGGGCTACACCAATTGTGGGCGGCTTGATGAGGCTTCGGAACTTTTTGACTCAATGCCAATTAAGTCGGTTGTTGCTTGTAATGCAATGATTCTTGGTTTTAGCCAGAATGGGGAGGTCCCAAAAGCAAGACAAGTGTTTGATCAAATGAGAGAAAAGGATGAAGGAACATGGAGTGCTATGATTAAGGTGTATGAAAGGAAAGGCTTTGAGTTAGAAGCACTTGAGTTGTTTCGTATGATGCAAAGAGAAGGAATAAGGCCAAACTTTCCTTCTTTGATAAGCGTTCTATCAGTTTGTGCTAGCTTGGCTAATCTCGATCACGGTAGAGAGATACATGCCCAGCTAGTGAGATCCCAATTTGACCTTGATGTCTATGTTGCCTCCGTTCTTCTCACAATGTACATAAAATGTGGCAATCTGGTGAAAGCAAAACAAGTATTTGATAGGTTTGCAATTAAGGATGTTGTTATGTGGAACTCTATTATCACAGGATATGCCCAACATGGTCTAGGGGAGGAAGCATTACGAGTTTTCCATGATATGCATTTTTCAGGTATCATGCCCGATGATATCACATTTGTTGGAGTTCTTTCGGCATGTAGTTACACTGGCAATGTGAAAAAGGGCTTGGAAATTTTCAATTCCATGGAAACAAACTATCAAGTGGATCCAAAAACTGAGCACTATGCTTGCATGGTTGATTTGCTTGGTCGAGCAGGTAAGCTAAATGAGGCAATGGATCTAATAGAAAAAATGCCAATGGAAGCTGATGCTATTATTTGGGGTGCTTTATTAGGTGCTTGCAGAACCCACATGAAATTGGATTTGGCTGAAGTTGCAGCCAAAAAGCTTCTACAGCTTGAGCCTAAAAATGCAGGGCCTTACATTTTGTTGTCAAATATTTATGCATCTCAAGGTAGATGGGGTGATGTTGCCGAGTTGCGGAGAAATATGAGAGATAGAAGTGTGAGCAAGTACCCAGGCTGTAGTTGGATTGTTGTGGAGAAGAAAGTACATAAGTTTACGGGAGGTGATAGCTCGGGACACCCTGAGCATTATGAGATCAATAGAATATTAGAGTGGTTATCTGGATTGCTAAGAGAGGCAGGATATTACCCAGATCGAAGTTTTGTGCTACATGATGTAGATGAAGAAGAGAAAGTGCAAAGCTTGGGATATCATAGTGAAAAACTGGCTGTGGCATATGGAATTCTCAAAATACCAAAAGGTATGCCAATTCGTGTAATGAAGAATCTTCGAGTATGTGGGGATTGCCACACTGCAATTAAACTAATTTCAAAGGTTACAGGAAGAGAGATCATCTTGAGAGATGCCAATCGGTTCCATCATTTTAAGGATGGTTCATGCTCTTGTCAGGATTATTGGTGA

mRNA sequence

ATGTCCTCTGGATTAATGTTTTTCCGTCTAGTTCTGAATCGTTTCTATAGTTCTACTCTTGGAATTTCATCTAATTCTCTTATTGCCCGGTATTCTCGATTGGGTCAAATCGAGAAGGCTCGGGCTGTGTTCGATGAAATGCGTGACAAAAGCATCGTTTCATGGAACTCAATTGTTGCTGGCTACTTTCAGAACAATCGGCCTGTGGAAGCCCAGAACATGTTTGATAAAATGTCTGAGAGGAATACTATATCTTGGAATGGTTTGATTTCTGGGTATATTAAGAATGGGATGATCAATGAAGCTAGGAAAGTGTTTGATAGAATGCCTGAGAGGAATGTTGTTTCGTGGACTGCAATGGTTAGGGGGTATGTGAAGCAGGGTATGATTTCTGAGGCAGAGACACTTTTTTGGCAAATGCCTGAAAAGAATGTAGTATCTTGGACGGTGATGTTGGGTGGCCTTATTCAAGAACGTCGGATTGATGAGGCTTGTAGGCTTTTCGATATGATGCCTGAGAAGGATGTGGTGGCAAGAACTAATATGATTGGAGGGTATTGCCAAGAAGGCCGTTTAGTGGAAGCTCGCAGGCTTTTCGATGAGATGCCTCGTCGAAATGTTGTGTCTTGGACTATGATGATAACAGGATATGTGCAGAATCAACAAGTGGATATTGCTAGAAAGCTGTTTGAAGTCATGCCAGAGAAAAATGAGGTTTCATGGACCGCTATGCTGATGGGCTACACCAATTGTGGGCGGCTTGATGAGGCTTCGGAACTTTTTGACTCAATGCCAATTAAGTCGGTTGTTGCTTGTAATGCAATGATTCTTGGTTTTAGCCAGAATGGGGAGGTCCCAAAAGCAAGACAAGTGTTTGATCAAATGAGAGAAAAGGATGAAGGAACATGGAGTGCTATGATTAAGGTGTATGAAAGGAAAGGCTTTGAGTTAGAAGCACTTGAGTTGTTTCGTATGATGCAAAGAGAAGGAATAAGGCCAAACTTTCCTTCTTTGATAAGCGTTCTATCAGTTTGTGCTAGCTTGGCTAATCTCGATCACGGTAGAGAGATACATGCCCAGCTAGTGAGATCCCAATTTGACCTTGATGTCTATGTTGCCTCCGTTCTTCTCACAATGTACATAAAATGTGGCAATCTGGTGAAAGCAAAACAAGTATTTGATAGGTTTGCAATTAAGGATGTTGTTATGTGGAACTCTATTATCACAGGATATGCCCAACATGGTCTAGGGGAGGAAGCATTACGAGTTTTCCATGATATGCATTTTTCAGGTATCATGCCCGATGATATCACATTTGTTGGAGTTCTTTCGGCATGTAGTTACACTGGCAATGTGAAAAAGGGCTTGGAAATTTTCAATTCCATGGAAACAAACTATCAAGTGGATCCAAAAACTGAGCACTATGCTTGCATGGTTGATTTGCTTGGTCGAGCAGGTAAGCTAAATGAGGCAATGGATCTAATAGAAAAAATGCCAATGGAAGCTGATGCTATTATTTGGGGTGCTTTATTAGGTGCTTGCAGAACCCACATGAAATTGGATTTGGCTGAAGTTGCAGCCAAAAAGCTTCTACAGCTTGAGCCTAAAAATGCAGGGCCTTACATTTTGTTGTCAAATATTTATGCATCTCAAGGTAGATGGGGTGATGTTGCCGAGTTGCGGAGAAATATGAGAGATAGAAGTGTGAGCAAGTACCCAGGCTGTAGTTGGATTGTTGTGGAGAAGAAAGTACATAAGTTTACGGGAGGTGATAGCTCGGGACACCCTGAGCATTATGAGATCAATAGAATATTAGAGTGGTTATCTGGATTGCTAAGAGAGGCAGGATATTACCCAGATCGAAGTTTTGTGCTACATGATGTAGATGAAGAAGAGAAAGTGCAAAGCTTGGGATATCATAGTGAAAAACTGGCTGTGGCATATGGAATTCTCAAAATACCAAAAGGTATGCCAATTCGTGTAATGAAGAATCTTCGAGTATGTGGGGATTGCCACACTGCAATTAAACTAATTTCAAAGGTTACAGGAAGAGAGATCATCTTGAGAGATGCCAATCGGTTCCATCATTTTAAGGATGGTTCATGCTCTTGTCAGGATTATTGGTGA

Coding sequence (CDS)

ATGTCCTCTGGATTAATGTTTTTCCGTCTAGTTCTGAATCGTTTCTATAGTTCTACTCTTGGAATTTCATCTAATTCTCTTATTGCCCGGTATTCTCGATTGGGTCAAATCGAGAAGGCTCGGGCTGTGTTCGATGAAATGCGTGACAAAAGCATCGTTTCATGGAACTCAATTGTTGCTGGCTACTTTCAGAACAATCGGCCTGTGGAAGCCCAGAACATGTTTGATAAAATGTCTGAGAGGAATACTATATCTTGGAATGGTTTGATTTCTGGGTATATTAAGAATGGGATGATCAATGAAGCTAGGAAAGTGTTTGATAGAATGCCTGAGAGGAATGTTGTTTCGTGGACTGCAATGGTTAGGGGGTATGTGAAGCAGGGTATGATTTCTGAGGCAGAGACACTTTTTTGGCAAATGCCTGAAAAGAATGTAGTATCTTGGACGGTGATGTTGGGTGGCCTTATTCAAGAACGTCGGATTGATGAGGCTTGTAGGCTTTTCGATATGATGCCTGAGAAGGATGTGGTGGCAAGAACTAATATGATTGGAGGGTATTGCCAAGAAGGCCGTTTAGTGGAAGCTCGCAGGCTTTTCGATGAGATGCCTCGTCGAAATGTTGTGTCTTGGACTATGATGATAACAGGATATGTGCAGAATCAACAAGTGGATATTGCTAGAAAGCTGTTTGAAGTCATGCCAGAGAAAAATGAGGTTTCATGGACCGCTATGCTGATGGGCTACACCAATTGTGGGCGGCTTGATGAGGCTTCGGAACTTTTTGACTCAATGCCAATTAAGTCGGTTGTTGCTTGTAATGCAATGATTCTTGGTTTTAGCCAGAATGGGGAGGTCCCAAAAGCAAGACAAGTGTTTGATCAAATGAGAGAAAAGGATGAAGGAACATGGAGTGCTATGATTAAGGTGTATGAAAGGAAAGGCTTTGAGTTAGAAGCACTTGAGTTGTTTCGTATGATGCAAAGAGAAGGAATAAGGCCAAACTTTCCTTCTTTGATAAGCGTTCTATCAGTTTGTGCTAGCTTGGCTAATCTCGATCACGGTAGAGAGATACATGCCCAGCTAGTGAGATCCCAATTTGACCTTGATGTCTATGTTGCCTCCGTTCTTCTCACAATGTACATAAAATGTGGCAATCTGGTGAAAGCAAAACAAGTATTTGATAGGTTTGCAATTAAGGATGTTGTTATGTGGAACTCTATTATCACAGGATATGCCCAACATGGTCTAGGGGAGGAAGCATTACGAGTTTTCCATGATATGCATTTTTCAGGTATCATGCCCGATGATATCACATTTGTTGGAGTTCTTTCGGCATGTAGTTACACTGGCAATGTGAAAAAGGGCTTGGAAATTTTCAATTCCATGGAAACAAACTATCAAGTGGATCCAAAAACTGAGCACTATGCTTGCATGGTTGATTTGCTTGGTCGAGCAGGTAAGCTAAATGAGGCAATGGATCTAATAGAAAAAATGCCAATGGAAGCTGATGCTATTATTTGGGGTGCTTTATTAGGTGCTTGCAGAACCCACATGAAATTGGATTTGGCTGAAGTTGCAGCCAAAAAGCTTCTACAGCTTGAGCCTAAAAATGCAGGGCCTTACATTTTGTTGTCAAATATTTATGCATCTCAAGGTAGATGGGGTGATGTTGCCGAGTTGCGGAGAAATATGAGAGATAGAAGTGTGAGCAAGTACCCAGGCTGTAGTTGGATTGTTGTGGAGAAGAAAGTACATAAGTTTACGGGAGGTGATAGCTCGGGACACCCTGAGCATTATGAGATCAATAGAATATTAGAGTGGTTATCTGGATTGCTAAGAGAGGCAGGATATTACCCAGATCGAAGTTTTGTGCTACATGATGTAGATGAAGAAGAGAAAGTGCAAAGCTTGGGATATCATAGTGAAAAACTGGCTGTGGCATATGGAATTCTCAAAATACCAAAAGGTATGCCAATTCGTGTAATGAAGAATCTTCGAGTATGTGGGGATTGCCACACTGCAATTAAACTAATTTCAAAGGTTACAGGAAGAGAGATCATCTTGAGAGATGCCAATCGGTTCCATCATTTTAAGGATGGTTCATGCTCTTGTCAGGATTATTGGTGA

Protein sequence

MSSGLMFFRLVLNRFYSSTLGISSNSLIARYSRLGQIEKARAVFDEMRDKSIVSWNSIVAGYFQNNRPVEAQNMFDKMSERNTISWNGLISGYIKNGMINEARKVFDRMPERNVVSWTAMVRGYVKQGMISEAETLFWQMPEKNVVSWTVMLGGLIQERRIDEACRLFDMMPEKDVVARTNMIGGYCQEGRLVEARRLFDEMPRRNVVSWTMMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLMGYTNCGRLDEASELFDSMPIKSVVACNAMILGFSQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGFELEALELFRMMQREGIRPNFPSLISVLSVCASLANLDHGREIHAQLVRSQFDLDVYVASVLLTMYIKCGNLVKAKQVFDRFAIKDVVMWNSIITGYAQHGLGEEALRVFHDMHFSGIMPDDITFVGVLSACSYTGNVKKGLEIFNSMETNYQVDPKTEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRWGDVAELRRNMRDRSVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHYEINRILEWLSGLLREAGYYPDRSFVLHDVDEEEKVQSLGYHSEKLAVAYGILKIPKGMPIRVMKNLRVCGDCHTAIKLISKVTGREIILRDANRFHHFKDGSCSCQDYW

Homology

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BLAST of Lsi01G017430 vs. ExPASy Swiss-Prot
Match: Q9FXB9 (Pentatricopeptide repeat-containing protein At1g56690, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H69 PE=2 SV=1)

HSP 1 Score: 1004.6 bits (2596), Expect = 5.6e-292
Identity = 466/700 (66.57%), Postives = 578/700 (82.57%), Query Frame = 0


Query: 9   RLVLNRFYSSTLGISSNSLIARYSRLGQIEKARAVFDEMRDKSIVSWNSIVAGYFQNNRP 68
           +L+L R Y ++ G++ +  I+R SR+G+I +AR  FD ++ K+I SWNSIV+GYF N  P
Sbjct: 5   KLILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLP 64

Query: 69  VEAQNMFDKMSERNTISWNGLISGYIKNGMINEARKVFDRMPERNVVSWTAMVRGYVKQG 128
            EA+ +FD+MSERN +SWNGL+SGYIKN MI EAR VF+ MPERNVVSWTAMV+GY+++G
Sbjct: 65  KEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEG 124

Query: 129 MISEAETLFWQMPEKNVVSWTVMLGGLIQERRIDEACRLFDMMPEKDVVARTNMIGGYCQ 188
           M+ EAE+LFW+MPE+N VSWTVM GGLI + RID+A +L+DMMP KDVVA TNMIGG C+
Sbjct: 125 MVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCR 184

Query: 189 EGRLVEARRLFDEMPRRNVVSWTMMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLMGY 248
           EGR+ EAR +FDEM  RNVV+WT MITGY QN +VD+ARKLFEVMPEK EVSWT+ML+GY
Sbjct: 185 EGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGY 244

Query: 249 TNCGRLDEASELFDSMPIKSVVACNAMILGFSQNGEVPKARQVFDQMREKDEGTWSAMIK 308
           T  GR+++A E F+ MP+K V+ACNAMI+GF + GE+ KAR+VFD M ++D  TW  MIK
Sbjct: 245 TLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIK 304

Query: 309 VYERKGFELEALELFRMMQREGIRPNFPSLISVLSVCASLANLDHGREIHAQLVRSQFDL 368
            YERKGFELEAL+LF  MQ++G+RP+FPSLIS+LSVCA+LA+L +GR++HA LVR QFD 
Sbjct: 305 AYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDD 364

Query: 369 DVYVASVLLTMYIKCGNLVKAKQVFDRFAIKDVVMWNSIITGYAQHGLGEEALRVFHDMH 428
           DVYVASVL+TMY+KCG LVKAK VFDRF+ KD++MWNSII+GYA HGLGEEAL++FH+M 
Sbjct: 365 DVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMP 424

Query: 429 FSGIMPDDITFVGVLSACSYTGNVKKGLEIFNSMETNYQVDPKTEHYACMVDLLGRAGKL 488
            SG MP+ +T + +L+ACSY G +++GLEIF SME+ + V P  EHY+C VD+LGRAG++
Sbjct: 425 SSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQV 484

Query: 489 NEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIY 548
           ++AM+LIE M ++ DA +WGALLGAC+TH +LDLAEVAAKKL + EP NAG Y+LLS+I 
Sbjct: 485 DKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSIN 544

Query: 549 ASQGRWGDVAELRRNMRDRSVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHYEINRILEWL 608
           AS+ +WGDVA +R+NMR  +VSK+PGCSWI V KKVH FT G    HPE   I  +LE  
Sbjct: 545 ASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKT 604

Query: 609 SGLLREAGYYPDRSFVLHDVDEEEKVQSLGYHSEKLAVAYGILKIPKGMPIRVMKNLRVC 668
            GLLREAGY PD S VLHDVDEEEKV SL  HSE+LAVAYG+LK+P+G+PIRVMKNLRVC
Sbjct: 605 DGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVC 664

Query: 669 GDCHTAIKLISKVTGREIILRDANRFHHFKDGSCSCQDYW 709
           GDCH AIKLISKVT REIILRDANRFHHF +G CSC+DYW
Sbjct: 665 GDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704

[Close]

BLAST of Lsi01G017430 vs. ExPASy Swiss-Prot
Match: Q56XI1 (Pentatricopeptide repeat-containing protein At1g09410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H18 PE=1 SV=2)

HSP 1 Score: 975.7 bits (2521), Expect = 2.8e-283
Identity = 452/702 (64.39%), Postives = 574/702 (81.77%), Query Frame = 0


Query: 9   RLVLNRFYSSTL-GISSNSLIARYSRLGQIEKARAVFDEMRDKSIVSWNSIVAGYFQNNR 68
           +++L R YS+T+   ++N  I   SR+G+I +AR +FD    KSI SWNS+VAGYF N  
Sbjct: 4   QILLRRTYSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLM 63

Query: 69  PVEAQNMFDKMSERNTISWNGLISGYIKNGMINEARKVFDRMPERNVVSWTAMVRGYVKQ 128
           P +A+ +FD+M +RN ISWNGL+SGY+KNG I+EARKVFD MPERNVVSWTA+V+GYV  
Sbjct: 64  PRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHN 123

Query: 129 GMISEAETLFWQMPEKNVVSWTVMLGGLIQERRIDEACRLFDMMPEKDVVARTNMIGGYC 188
           G +  AE+LFW+MPEKN VSWTVML G +Q+ RID+AC+L++M+P+KD +ART+MI G C
Sbjct: 124 GKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLC 183

Query: 189 QEGRLVEARRLFDEMPRRNVVSWTMMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLMG 248
           +EGR+ EAR +FDEM  R+V++WT M+TGY QN +VD ARK+F+VMPEK EVSWT+MLMG
Sbjct: 184 KEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMG 243

Query: 249 YTNCGRLDEASELFDSMPIKSVVACNAMILGFSQNGEVPKARQVFDQMREKDEGTWSAMI 308
           Y   GR+++A ELF+ MP+K V+ACNAMI G  Q GE+ KAR+VFD M+E+++ +W  +I
Sbjct: 244 YVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVI 303

Query: 309 KVYERKGFELEALELFRMMQREGIRPNFPSLISVLSVCASLANLDHGREIHAQLVRSQFD 368
           K++ER GFELEAL+LF +MQ++G+RP FP+LIS+LSVCASLA+L HG+++HAQLVR QFD
Sbjct: 304 KIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFD 363

Query: 369 LDVYVASVLLTMYIKCGNLVKAKQVFDRFAIKDVVMWNSIITGYAQHGLGEEALRVFHDM 428
           +DVYVASVL+TMYIKCG LVK+K +FDRF  KD++MWNSII+GYA HGLGEEAL+VF +M
Sbjct: 364 VDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEM 423

Query: 429 HFSG-IMPDDITFVGVLSACSYTGNVKKGLEIFNSMETNYQVDPKTEHYACMVDLLGRAG 488
             SG   P+++TFV  LSACSY G V++GL+I+ SME+ + V P T HYACMVD+LGRAG
Sbjct: 424 PLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAG 483

Query: 489 KLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSN 548
           + NEAM++I+ M +E DA +WG+LLGACRTH +LD+AE  AKKL+++EP+N+G YILLSN
Sbjct: 484 RFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSN 543

Query: 549 IYASQGRWGDVAELRRNMRDRSVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHYEINRILE 608
           +YASQGRW DVAELR+ M+ R V K PGCSW  VE KVH FT G  + HPE   I +IL+
Sbjct: 544 MYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILD 603

Query: 609 WLSGLLREAGYYPDRSFVLHDVDEEEKVQSLGYHSEKLAVAYGILKIPKGMPIRVMKNLR 668
            L GLLREAGY PD S+ LHDVDEEEKV SL YHSE+LAVAY +LK+ +G+PIRVMKNLR
Sbjct: 604 ELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLR 663

Query: 669 VCGDCHTAIKLISKVTGREIILRDANRFHHFKDGSCSCQDYW 709
           VC DCHTAIK+ISKV  REIILRDANRFHHF++G CSC+DYW
Sbjct: 664 VCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705

[Close]

BLAST of Lsi01G017430 vs. ExPASy Swiss-Prot
Match: Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 740.0 bits (1909), Expect = 2.6e-212
Identity = 349/687 (50.80%), Postives = 477/687 (69.43%), Query Frame = 0


Query: 22  ISSNSLIARYSRLGQIEKARAVFDEMRDKSIVSWNSIVAGYFQNNRPVEAQNMFDKMSER 81
           +S N +I+ Y R G+ E AR +FDEM ++ +VSWN ++ GY +N    +A+ +F+ M ER
Sbjct: 96  VSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPER 155

Query: 82  NTISWNGLISGYIKNGMINEARKVFDRMPERNVVSWTAMVRGYVKQGMISEAETLFWQMP 141
           +  SWN ++SGY +NG +++AR VFDRMPE+N VSW A++  YV+   + EA  LF    
Sbjct: 156 DVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRE 215

Query: 142 EKNVVSWTVMLGGLIQERRIDEACRLFDMMPEKDVVARTNMIGGYCQEGRLVEARRLFDE 201
              +VSW  +LGG +++++I EA + FD M  +DVV+   +I GY Q G++ EAR+LFDE
Sbjct: 216 NWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE 275

Query: 202 MPRRNVVSWTMMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLMGYTNCGRLDEASELF 261
            P ++V +WT M++GY+QN+ V+ AR+LF+ MPE+NEVSW AML GY    R++ A ELF
Sbjct: 276 SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELF 335

Query: 262 DSMPIKSVVACNAMILGFSQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGFELEALE 321
           D MP ++V   N MI G++Q G++ +A+ +FD+M ++D  +W+AMI  Y + G   EAL 
Sbjct: 336 DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALR 395

Query: 322 LFRMMQREGIRPNFPSLISVLSVCASLANLDHGREIHAQLVRSQFDLDVYVASVLLTMYI 381
           LF  M+REG R N  S  S LS CA +  L+ G+++H +LV+  ++   +V + LL MY 
Sbjct: 396 LFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYC 455

Query: 382 KCGNLVKAKQVFDRFAIKDVVMWNSIITGYAQHGLGEEALRVFHDMHFSGIMPDDITFVG 441
           KCG++ +A  +F   A KD+V WN++I GY++HG GE ALR F  M   G+ PDD T V 
Sbjct: 456 KCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVA 515

Query: 442 VLSACSYTGNVKKGLEIFNSMETNYQVDPKTEHYACMVDLLGRAGKLNEAMDLIEKMPME 501
           VLSACS+TG V KG + F +M  +Y V P ++HYACMVDLLGRAG L +A +L++ MP E
Sbjct: 516 VLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFE 575

Query: 502 ADAIIWGALLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRWGDVAELR 561
            DA IWG LLGA R H   +LAE AA K+  +EP+N+G Y+LLSN+YAS GRWGDV +LR
Sbjct: 576 PDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLR 635

Query: 562 RNMRDRSVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHYEINRILEWLSGLLREAGYYPDR 621
             MRD+ V K PG SWI ++ K H F+ GD   HPE  EI   LE L   +++AGY    
Sbjct: 636 VRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEF-HPEKDEIFAFLEELDLRMKKAGYVSKT 695

Query: 622 SFVLHDVDEEEKVQSLGYHSEKLAVAYGILKIPKGMPIRVMKNLRVCGDCHTAIKLISKV 681
           S VLHDV+EEEK + + YHSE+LAVAYGI+++  G PIRV+KNLRVC DCH AIK ++++
Sbjct: 696 SVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARI 755

Query: 682 TGREIILRDANRFHHFKDGSCSCQDYW 709
           TGR IILRD NRFHHFKDGSCSC DYW
Sbjct: 756 TGRLIILRDNNRFHHFKDGSCSCGDYW 781

[Close]

BLAST of Lsi01G017430 vs. ExPASy Swiss-Prot
Match: Q9M4P3 (Pentatricopeptide repeat-containing protein At4g16835, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=DYW10 PE=2 SV=3)

HSP 1 Score: 550.1 bits (1416), Expect = 3.8e-155
Identity = 279/586 (47.61%), Postives = 378/586 (64.51%), Query Frame = 0


Query: 125 VKQGMISEAETLFWQMPEKNVVSWTVMLGGLIQE-RRIDEACRLFDMMPEKDVVARTNMI 184
           V+ G I  A  +F  M  KN ++W  +L G+ ++  R+ EA +LFD +PE D  +   M+
Sbjct: 72  VRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIML 131

Query: 185 GGYCQEGRLVEARRLFDEMPRRNVVSWTMMITGYVQNQQVDIARKLFEVMPEKNEVSWTA 244
             Y +     +A+  FD MP ++  SW  MITGY +  +++ AR+LF  M EKNEVSW A
Sbjct: 132 SCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNA 191

Query: 245 MLMGYTNCGRLDEASELFDSMPIKSVVACNAMILGFSQNGEVPKARQVFDQMR-EKDEGT 304
           M+ GY  CG L++AS  F   P++ VVA  AMI G+ +  +V  A  +F  M   K+  T
Sbjct: 192 MISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVT 251

Query: 305 WSAMIKVYERKGFELEALELFRMMQREGIRPNFPSLISVLSVCASLANLDHGREIHAQLV 364
           W+AMI  Y       + L+LFR M  EGIRPN   L S L  C+ L+ L  GR+IH  + 
Sbjct: 252 WNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVS 311

Query: 365 RSQFDLDVYVASVLLTMYIKCGNLVKAKQVFDRFAIKDVVMWNSIITGYAQHGLGEEALR 424
           +S    DV   + L++MY KCG L  A ++F+    KDVV WN++I+GYAQHG  ++AL 
Sbjct: 312 KSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALC 371

Query: 425 VFHDMHFSGIMPDDITFVGVLSACSYTGNVKKGLEIFNSMETNYQVDPKTEHYACMVDLL 484
           +F +M  + I PD ITFV VL AC++ G V  G+  F SM  +Y+V+P+ +HY CMVDLL
Sbjct: 372 LFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLL 431

Query: 485 GRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYI 544
           GRAGKL EA+ LI  MP    A ++G LLGACR H  ++LAE AA+KLLQL  +NA  Y+
Sbjct: 432 GRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYV 491

Query: 545 LLSNIYASQGRWGDVAELRRNMRDRSVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHYEIN 604
            L+NIYAS+ RW DVA +R+ M++ +V K PG SWI +  KVH F   D   HPE   I+
Sbjct: 492 QLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRI-HPELDSIH 551

Query: 605 RILEWLSGLLREAGYYPDRSFVLHDVDEEEKVQSLGYHSEKLAVAYGILKIPKGMPIRVM 664
           + L+ L   ++ AGY P+  F LH+V+EE+K + L +HSEKLAVA+G +K+P+G  I+V 
Sbjct: 552 KKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVF 611

Query: 665 KNLRVCGDCHTAIKLISKVTGREIILRDANRFHHFKDGSCSCQDYW 709
           KNLR+CGDCH AIK IS++  REII+RD  RFHHFKDGSCSC DYW
Sbjct: 612 KNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656

[Close]

BLAST of Lsi01G017430 vs. ExPASy Swiss-Prot
Match: Q9FHF9 (Pentatricopeptide repeat-containing protein At5g46460, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H49 PE=2 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 4.0e-149
Identity = 281/705 (39.86%), Postives = 410/705 (58.16%), Query Frame = 0


Query: 14  RFYSSTLGISSNS-LIARYSRLGQIEKARAVFDEMRDKSIVSWNSIVAGYFQNNRPVEAQ 73
           R +S T+   +   LI  +    +I++AR VF+++    +  +  ++ GY ++NR V+A 
Sbjct: 27  RSFSVTVEFQNREVLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDAL 86

Query: 74  NMFDKMSERNTISWNGLISGYIKNGMINEARKVFDRMPERNVVSWTAMVRGYVKQGMISE 133
           N+FD+M  R+ +SWN +ISG ++ G +N A K+FD MPER+VVSWTAMV G  + G + +
Sbjct: 87  NLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQ 146

Query: 134 AETLFWQMPEKNVVSWTVMLGGLIQERRIDEACRLFDMMPEKDVVARTNMIGGYCQEGRL 193
           AE LF+QMP K+  +W  M+ G +Q  ++D+A +LF  MP K+V++ T MI G  Q  R 
Sbjct: 147 AERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERS 206

Query: 194 VEARRLFDEMPRRNVVS----WTMMITGYVQ----NQQVDIARKLFEVMPEKNEVSWTAM 253
            EA  LF  M R  + S    +T +IT        +  + +   + ++     E    ++
Sbjct: 207 GEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASL 266

Query: 254 LMGYTNCGRLDEASELFDSMPIKSVVACNAMILGFSQNGEVPKARQVFDQMREKDEGTWS 313
           +  Y NC R+ +                               +R+VFD+   +    W+
Sbjct: 267 ITFYANCKRIGD-------------------------------SRKVFDEKVHEQVAVWT 326

Query: 314 AMIKVYERKGFELEALELFRMMQREGIRPNFPSLISVLSVCASLANLDHGREIHAQLVRS 373
           A++  Y       +AL +F  M R  I PN  +  S L+ C++L  LD G+E+H   V+ 
Sbjct: 327 ALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKL 386

Query: 374 QFDLDVYVASVLLTMYIKCGNLVKAKQVFDRFAIKDVVMWNSIITGYAQHGLGEEALRVF 433
             + D +V + L+ MY   GN+  A  VF +   K +V WNSII G AQHG G+ A  +F
Sbjct: 387 GLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIF 446

Query: 434 HDMHFSGIMPDDITFVGVLSACSYTGNVKKGLEIFNSMETNY-QVDPKTEHYACMVDLLG 493
             M      PD+ITF G+LSACS+ G ++KG ++F  M +    +D K +HY CMVD+LG
Sbjct: 447 GQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILG 506

Query: 494 RAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYIL 553
           R GKL EA +LIE+M ++ + ++W ALL ACR H  +D  E AA  +  L+ K++  Y+L
Sbjct: 507 RCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVL 566

Query: 554 LSNIYASQGRWGDVAELRRNMRDRSVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHYEINR 613
           LSNIYAS GRW +V++LR  M+   + K PG SW+V+  K H+F  GD    P    I  
Sbjct: 567 LSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGD---QPHCSRIYE 626

Query: 614 ILEWLSGLLREAGYYPDRSFVLHDVDEEEKVQSLGYHSEKLAVAYGILKIPKGMPIRVMK 673
            LE+L   L+E GY PD    LHDV++E+K + L YHSE+LA+A+G++   +G  + VMK
Sbjct: 627 KLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMK 686

Query: 674 NLRVCGDCHTAIKLISKVTGREIILRDANRFHHFKDGSCSCQDYW 709
           NLRVC DCHT IKLIS V GREI+LRD  RFHHFK+G+CSC DYW
Sbjct: 687 NLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697

[Close]

BLAST of Lsi01G017430 vs. ExPASy TrEMBL
Match: A0A5D3CHE0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G00980 PE=3 SV=1)

HSP 1 Score: 1359.7 bits (3518), Expect = 0.0e+00
Identity = 662/708 (93.50%), Postives = 679/708 (95.90%), Query Frame = 0


Query: 1   MSSGLMFFRLVLNRFYSSTLGISSNSLIARYSRLGQIEKARAVFDEMRDKSIVSWNSIVA 60
           M SGLMFFRLVLNRFYSS   ISSN+LIARYSRLGQIEKARAVFDEMRDK+I+SWNSIVA
Sbjct: 55  MFSGLMFFRLVLNRFYSSNFIISSNALIARYSRLGQIEKARAVFDEMRDKNIISWNSIVA 114

Query: 61  GYFQNNRPVEAQNMFDKMSERNTISWNGLISGYIKNGMINEARKVFDRMPERNVVSWTAM 120
           GYFQN RP EAQNMFDKMSERNTISWNGLISGYI NGMINEARKVFDRMPERNVVSWTAM
Sbjct: 115 GYFQNKRPQEAQNMFDKMSERNTISWNGLISGYINNGMINEARKVFDRMPERNVVSWTAM 174

Query: 121 VRGYVKQGMISEAETLFWQMPEKNVVSWTVMLGGLIQERRIDEACRLFDMMPEKDVVART 180
           VRGYVK+G+ISEAETLFWQMPEKNVVSWTVMLGGLIQE R+DEACRLFDMMPEKDVV RT
Sbjct: 175 VRGYVKEGIISEAETLFWQMPEKNVVSWTVMLGGLIQEGRMDEACRLFDMMPEKDVVTRT 234

Query: 181 NMIGGYCQEGRLVEARRLFDEMPRRNVVSWTMMITGYVQNQQVDIARKLFEVMPEKNEVS 240
           NMIGGYCQ GRLVEARRLFDEMP RNVVSWT MITGYVQNQQVDIARKLFEVMPEKNEVS
Sbjct: 235 NMIGGYCQVGRLVEARRLFDEMPCRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVS 294

Query: 241 WTAMLMGYTNCGRLDEASELFDSMPIKSVVACNAMILGFSQNGEVPKARQVFDQMREKDE 300
           WTAML GYTNCGRLDEAS LF++MPIKSVVACNAMIL F QNGEVPKARQVFD+MREKDE
Sbjct: 295 WTAMLKGYTNCGRLDEASGLFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDEMREKDE 354

Query: 301 GTWSAMIKVYERKGFELEALELFRMMQREGIRPNFPSLISVLSVCASLANLDHGREIHAQ 360
           GTWSAMIKVYERKG EL+ALELFRMMQREGIRPNFPSLISVLSVCA LANLDHGREIHAQ
Sbjct: 355 GTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQ 414

Query: 361 LVRSQFDLDVYVASVLLTMYIKCGNLVKAKQVFDRFAIKDVVMWNSIITGYAQHGLGEEA 420
           LVRSQFDLDVYVASVLL+MYIKCGNL KAKQVFDRFA+KDVVMWNSIITGYAQHGLGEEA
Sbjct: 415 LVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGEEA 474

Query: 421 LRVFHDMHFSGIMPDDITFVGVLSACSYTGNVKKGLEIFNSMETNYQVDPKTEHYACMVD 480
           LRVFHDMHFSGIMPDDITFVGVLSACSYTGNVKKGLEIF SMET YQV+ K EHYACMVD
Sbjct: 475 LRVFHDMHFSGIMPDDITFVGVLSACSYTGNVKKGLEIFYSMETKYQVEQKIEHYACMVD 534

Query: 481 LLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 540
           LLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLL LEPKNAGP
Sbjct: 535 LLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLYLEPKNAGP 594

Query: 541 YILLSNIYASQGRWGDVAELRRNMRDRSVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHYE 600
           +ILLSNIYASQGRWGDVAELRRNMRDR VSKYPGCSWIVVEKKVHKFTGGDSSGHPEH E
Sbjct: 595 FILLSNIYASQGRWGDVAELRRNMRDRHVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSE 654

Query: 601 INRILEWLSGLLREAGYYPDRSFVLHDVDEEEKVQSLGYHSEKLAVAYGILKIPKGMPIR 660
           INRILEWLSGLLREAGYYPD+SFVLHDVDEEEKVQSL YHSEKLAVAYG+ KIPKGMPIR
Sbjct: 655 INRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLFKIPKGMPIR 714

Query: 661 VMKNLRVCGDCHTAIKLISKVTGREIILRDANRFHHFKDGSCSCQDYW 709
           VMKNLRVCGDCH AIKLI+KVTGREIILRDANRFHHFKDGSCSCQDYW
Sbjct: 715 VMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCQDYW 762

[Close]

BLAST of Lsi01G017430 vs. ExPASy TrEMBL
Match: A0A5A7SMU0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G00070 PE=3 SV=1)

HSP 1 Score: 1359.7 bits (3518), Expect = 0.0e+00
Identity = 662/708 (93.50%), Postives = 679/708 (95.90%), Query Frame = 0


Query: 1   MSSGLMFFRLVLNRFYSSTLGISSNSLIARYSRLGQIEKARAVFDEMRDKSIVSWNSIVA 60
           M SGLMFFRLVLNRFYSS   ISSN+LIARYSRLGQIEKARAVFDEMRDK+I+SWNSIVA
Sbjct: 1   MFSGLMFFRLVLNRFYSSNFIISSNALIARYSRLGQIEKARAVFDEMRDKNIISWNSIVA 60

Query: 61  GYFQNNRPVEAQNMFDKMSERNTISWNGLISGYIKNGMINEARKVFDRMPERNVVSWTAM 120
           GYFQN RP EAQNMFDKMSERNTISWNGLISGYI NGMINEARKVFDRMPERNVVSWTAM
Sbjct: 61  GYFQNKRPQEAQNMFDKMSERNTISWNGLISGYINNGMINEARKVFDRMPERNVVSWTAM 120

Query: 121 VRGYVKQGMISEAETLFWQMPEKNVVSWTVMLGGLIQERRIDEACRLFDMMPEKDVVART 180
           VRGYVK+G+ISEAETLFWQMPEKNVVSWTVMLGGLIQE R+DEACRLFDMMPEKDVV RT
Sbjct: 121 VRGYVKEGIISEAETLFWQMPEKNVVSWTVMLGGLIQEGRMDEACRLFDMMPEKDVVTRT 180

Query: 181 NMIGGYCQEGRLVEARRLFDEMPRRNVVSWTMMITGYVQNQQVDIARKLFEVMPEKNEVS 240
           NMIGGYCQ GRLVEARRLFDEMP RNVVSWT MITGYVQNQQVDIARKLFEVMPEKNEVS
Sbjct: 181 NMIGGYCQVGRLVEARRLFDEMPCRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVS 240

Query: 241 WTAMLMGYTNCGRLDEASELFDSMPIKSVVACNAMILGFSQNGEVPKARQVFDQMREKDE 300
           WTAML GYTNCGRLDEAS LF++MPIKSVVACNAMIL F QNGEVPKARQVFD+MREKDE
Sbjct: 241 WTAMLKGYTNCGRLDEASGLFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDEMREKDE 300

Query: 301 GTWSAMIKVYERKGFELEALELFRMMQREGIRPNFPSLISVLSVCASLANLDHGREIHAQ 360
           GTWSAMIKVYERKG EL+ALELFRMMQREGIRPNFPSLISVLSVCA LANLDHGREIHAQ
Sbjct: 301 GTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQ 360

Query: 361 LVRSQFDLDVYVASVLLTMYIKCGNLVKAKQVFDRFAIKDVVMWNSIITGYAQHGLGEEA 420
           LVRSQFDLDVYVASVLL+MYIKCGNL KAKQVFDRFA+KDVVMWNSIITGYAQHGLGEEA
Sbjct: 361 LVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGEEA 420

Query: 421 LRVFHDMHFSGIMPDDITFVGVLSACSYTGNVKKGLEIFNSMETNYQVDPKTEHYACMVD 480
           LRVFHDMHFSGIMPDDITFVGVLSACSYTGNVKKGLEIF SMET YQV+ K EHYACMVD
Sbjct: 421 LRVFHDMHFSGIMPDDITFVGVLSACSYTGNVKKGLEIFYSMETKYQVEQKIEHYACMVD 480

Query: 481 LLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 540
           LLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLL LEPKNAGP
Sbjct: 481 LLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLYLEPKNAGP 540

Query: 541 YILLSNIYASQGRWGDVAELRRNMRDRSVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHYE 600
           +ILLSNIYASQGRWGDVAELRRNMRDR VSKYPGCSWIVVEKKVHKFTGGDSSGHPEH E
Sbjct: 541 FILLSNIYASQGRWGDVAELRRNMRDRHVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSE 600

Query: 601 INRILEWLSGLLREAGYYPDRSFVLHDVDEEEKVQSLGYHSEKLAVAYGILKIPKGMPIR 660
           INRILEWLSGLLREAGYYPD+SFVLHDVDEEEKVQSL YHSEKLAVAYG+ KIPKGMPIR
Sbjct: 601 INRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLFKIPKGMPIR 660

Query: 661 VMKNLRVCGDCHTAIKLISKVTGREIILRDANRFHHFKDGSCSCQDYW 709
           VMKNLRVCGDCH AIKLI+KVTGREIILRDANRFHHFKDGSCSCQDYW
Sbjct: 661 VMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCQDYW 708

[Close]

BLAST of Lsi01G017430 vs. ExPASy TrEMBL
Match: A0A1S3C183 (pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103495864 PE=3 SV=1)

HSP 1 Score: 1359.7 bits (3518), Expect = 0.0e+00
Identity = 662/708 (93.50%), Postives = 679/708 (95.90%), Query Frame = 0


Query: 1   MSSGLMFFRLVLNRFYSSTLGISSNSLIARYSRLGQIEKARAVFDEMRDKSIVSWNSIVA 60
           M SGLMFFRLVLNRFYSS   ISSN+LIARYSRLGQIEKARAVFDEMRDK+I+SWNSIVA
Sbjct: 1   MFSGLMFFRLVLNRFYSSNFIISSNALIARYSRLGQIEKARAVFDEMRDKNIISWNSIVA 60

Query: 61  GYFQNNRPVEAQNMFDKMSERNTISWNGLISGYIKNGMINEARKVFDRMPERNVVSWTAM 120
           GYFQN RP EAQNMFDKMSERNTISWNGLISGYI NGMINEARKVFDRMPERNVVSWTAM
Sbjct: 61  GYFQNKRPQEAQNMFDKMSERNTISWNGLISGYINNGMINEARKVFDRMPERNVVSWTAM 120

Query: 121 VRGYVKQGMISEAETLFWQMPEKNVVSWTVMLGGLIQERRIDEACRLFDMMPEKDVVART 180
           VRGYVK+G+ISEAETLFWQMPEKNVVSWTVMLGGLIQE R+DEACRLFDMMPEKDVV RT
Sbjct: 121 VRGYVKEGIISEAETLFWQMPEKNVVSWTVMLGGLIQEGRMDEACRLFDMMPEKDVVTRT 180

Query: 181 NMIGGYCQEGRLVEARRLFDEMPRRNVVSWTMMITGYVQNQQVDIARKLFEVMPEKNEVS 240
           NMIGGYCQ GRLVEARRLFDEMP RNVVSWT MITGYVQNQQVDIARKLFEVMPEKNEVS
Sbjct: 181 NMIGGYCQVGRLVEARRLFDEMPCRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVS 240

Query: 241 WTAMLMGYTNCGRLDEASELFDSMPIKSVVACNAMILGFSQNGEVPKARQVFDQMREKDE 300
           WTAML GYTNCGRLDEAS LF++MPIKSVVACNAMIL F QNGEVPKARQVFD+MREKDE
Sbjct: 241 WTAMLKGYTNCGRLDEASGLFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDEMREKDE 300

Query: 301 GTWSAMIKVYERKGFELEALELFRMMQREGIRPNFPSLISVLSVCASLANLDHGREIHAQ 360
           GTWSAMIKVYERKG EL+ALELFRMMQREGIRPNFPSLISVLSVCA LANLDHGREIHAQ
Sbjct: 301 GTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQ 360

Query: 361 LVRSQFDLDVYVASVLLTMYIKCGNLVKAKQVFDRFAIKDVVMWNSIITGYAQHGLGEEA 420
           LVRSQFDLDVYVASVLL+MYIKCGNL KAKQVFDRFA+KDVVMWNSIITGYAQHGLGEEA
Sbjct: 361 LVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGEEA 420

Query: 421 LRVFHDMHFSGIMPDDITFVGVLSACSYTGNVKKGLEIFNSMETNYQVDPKTEHYACMVD 480
           LRVFHDMHFSGIMPDDITFVGVLSACSYTGNVKKGLEIF SMET YQV+ K EHYACMVD
Sbjct: 421 LRVFHDMHFSGIMPDDITFVGVLSACSYTGNVKKGLEIFYSMETKYQVEQKIEHYACMVD 480

Query: 481 LLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 540
           LLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLL LEPKNAGP
Sbjct: 481 LLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLYLEPKNAGP 540

Query: 541 YILLSNIYASQGRWGDVAELRRNMRDRSVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHYE 600
           +ILLSNIYASQGRWGDVAELRRNMRDR VSKYPGCSWIVVEKKVHKFTGGDSSGHPEH E
Sbjct: 541 FILLSNIYASQGRWGDVAELRRNMRDRHVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSE 600

Query: 601 INRILEWLSGLLREAGYYPDRSFVLHDVDEEEKVQSLGYHSEKLAVAYGILKIPKGMPIR 660
           INRILEWLSGLLREAGYYPD+SFVLHDVDEEEKVQSL YHSEKLAVAYG+ KIPKGMPIR
Sbjct: 601 INRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLFKIPKGMPIR 660

Query: 661 VMKNLRVCGDCHTAIKLISKVTGREIILRDANRFHHFKDGSCSCQDYW 709
           VMKNLRVCGDCH AIKLI+KVTGREIILRDANRFHHFKDGSCSCQDYW
Sbjct: 661 VMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCQDYW 708

[Close]

BLAST of Lsi01G017430 vs. ExPASy TrEMBL
Match: A0A6J1DX33 (pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111025343 PE=3 SV=1)

HSP 1 Score: 1355.9 bits (3508), Expect = 0.0e+00
Identity = 655/708 (92.51%), Postives = 683/708 (96.47%), Query Frame = 0


Query: 1   MSSGLMFFRLVLNRFYSSTLGISSNSLIARYSRLGQIEKARAVFDEMRDKSIVSWNSIVA 60
           MSSGLMFFRLVL+RFY ST+GISSNSLIARYSRLGQIEKAR+VFD+MR+KSIVSWNSIVA
Sbjct: 1   MSSGLMFFRLVLDRFYCSTVGISSNSLIARYSRLGQIEKARSVFDQMREKSIVSWNSIVA 60

Query: 61  GYFQNNRPVEAQNMFDKMSERNTISWNGLISGYIKNGMINEARKVFDRMPERNVVSWTAM 120
           GYFQNN+P EAQNMFDKMSERNTISWNGL+SGYIKNGMI+EARKVFD+MPERNVVSWTAM
Sbjct: 61  GYFQNNQPEEAQNMFDKMSERNTISWNGLVSGYIKNGMISEARKVFDKMPERNVVSWTAM 120

Query: 121 VRGYVKQGMISEAETLFWQMPEKNVVSWTVMLGGLIQERRIDEACRLFDMMPEKDVVART 180
           VRGYVK+GMI EAETLFWQMPEKNVVSWTVMLGGLIQE RIDEACRLFDMMPEKDVVART
Sbjct: 121 VRGYVKEGMIYEAETLFWQMPEKNVVSWTVMLGGLIQEGRIDEACRLFDMMPEKDVVART 180

Query: 181 NMIGGYCQEGRLVEARRLFDEMPRRNVVSWTMMITGYVQNQQVDIARKLFEVMPEKNEVS 240
           NMIGGYCQ+GRL+EARRLFDEMPRRNVVSWTMMITGYVQNQQVDIARKLFEVMPEKNEVS
Sbjct: 181 NMIGGYCQKGRLIEARRLFDEMPRRNVVSWTMMITGYVQNQQVDIARKLFEVMPEKNEVS 240

Query: 241 WTAMLMGYTNCGRLDEASELFDSMPIKSVVACNAMILGFSQNGEVPKARQVFDQMREKDE 300
           WTAMLMGY NCGRLDEASELFD+MPIKSVV+CNAMILGF QNGEVPKA QVFDQM EKDE
Sbjct: 241 WTAMLMGYINCGRLDEASELFDAMPIKSVVSCNAMILGFGQNGEVPKATQVFDQMIEKDE 300

Query: 301 GTWSAMIKVYERKGFELEALELFRMMQREGIRPNFPSLISVLSVCASLANLDHGREIHAQ 360
           G+WSAMIKVYERKG ELEALELFR MQREGIRPNFPSLISVLSVCASLANLDHGRE+HAQ
Sbjct: 301 GSWSAMIKVYERKGSELEALELFRSMQREGIRPNFPSLISVLSVCASLANLDHGREVHAQ 360

Query: 361 LVRSQFDLDVYVASVLLTMYIKCGNLVKAKQVFDRFAIKDVVMWNSIITGYAQHGLGEEA 420
           LVRSQFDLDVYVASVL+TMY+KCGNLVKAKQVFDRF IKDVVMWNSIITGYAQHGLGEEA
Sbjct: 361 LVRSQFDLDVYVASVLITMYVKCGNLVKAKQVFDRFPIKDVVMWNSIITGYAQHGLGEEA 420

Query: 421 LRVFHDMHFSGIMPDDITFVGVLSACSYTGNVKKGLEIFNSMETNYQVDPKTEHYACMVD 480
           L+VFHDMHFSG+MPDDITFVGVLSACSYTGNVKKGLEIFNSME  Y V+ KTEHYACMVD
Sbjct: 421 LQVFHDMHFSGVMPDDITFVGVLSACSYTGNVKKGLEIFNSMEPKYHVERKTEHYACMVD 480

Query: 481 LLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 540
           LLGRAGKLNEAM LIEKMPMEADAIIWGALLGACR HMKLDLAE+AAKKLL+LEPKNAGP
Sbjct: 481 LLGRAGKLNEAMGLIEKMPMEADAIIWGALLGACRIHMKLDLAEIAAKKLLELEPKNAGP 540

Query: 541 YILLSNIYASQGRWGDVAELRRNMRDRSVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHYE 600
           YILLSNIYASQGRW DV ELRRNMRDRSVSK PGCSWI VEKKVH FTGGDS GHPEH E
Sbjct: 541 YILLSNIYASQGRWSDVVELRRNMRDRSVSKSPGCSWIDVEKKVHMFTGGDSMGHPEHSE 600

Query: 601 INRILEWLSGLLREAGYYPDRSFVLHDVDEEEKVQSLGYHSEKLAVAYGILKIPKGMPIR 660
           I RIL+WLSGLLREAGYYPDRSFVLHDVDEEEKVQSLGYHSEKLAVAYG+LKIPKGMPIR
Sbjct: 601 IMRILDWLSGLLREAGYYPDRSFVLHDVDEEEKVQSLGYHSEKLAVAYGLLKIPKGMPIR 660

Query: 661 VMKNLRVCGDCHTAIKLISKVTGREIILRDANRFHHFKDGSCSCQDYW 709
           VMKNLRVCGDCHTAIKLI+KV+GREIILRDANRFHHFKDGSCSC+DYW
Sbjct: 661 VMKNLRVCGDCHTAIKLIAKVSGREIILRDANRFHHFKDGSCSCKDYW 708

[Close]

BLAST of Lsi01G017430 vs. ExPASy TrEMBL
Match: A0A0A0L0T3 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G418570 PE=3 SV=1)

HSP 1 Score: 1352.4 bits (3499), Expect = 0.0e+00
Identity = 657/708 (92.80%), Postives = 675/708 (95.34%), Query Frame = 0


Query: 1   MSSGLMFFRLVLNRFYSSTLGISSNSLIARYSRLGQIEKARAVFDEMRDKSIVSWNSIVA 60
           M SGLMFFRLVLNRFY S   IS NSLI RYSRLGQIEKAR VFDEMRDK+I+SWNSIVA
Sbjct: 67  MFSGLMFFRLVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVA 126

Query: 61  GYFQNNRPVEAQNMFDKMSERNTISWNGLISGYIKNGMINEARKVFDRMPERNVVSWTAM 120
           GYFQN RP EAQNMFDKMSERNTISWNGL+SGYI NGMINEAR+VFDRMPERNVVSWTAM
Sbjct: 127 GYFQNKRPQEAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAM 186

Query: 121 VRGYVKQGMISEAETLFWQMPEKNVVSWTVMLGGLIQERRIDEACRLFDMMPEKDVVART 180
           VRGYVK+GMISEAETLFWQMPEKNVVSWTVMLGGL+QE RIDEACRLFDMMPEKDVV RT
Sbjct: 187 VRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRT 246

Query: 181 NMIGGYCQEGRLVEARRLFDEMPRRNVVSWTMMITGYVQNQQVDIARKLFEVMPEKNEVS 240
           NMIGGYCQ GRLVEAR LFDEMPRRNVVSWT MITGYVQNQQVDIARKLFEVMPEKNEVS
Sbjct: 247 NMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVS 306

Query: 241 WTAMLMGYTNCGRLDEASELFDSMPIKSVVACNAMILGFSQNGEVPKARQVFDQMREKDE 300
           WTAML GYTNCGRLDEASELF++MPIKSVVACNAMIL F QNGEVPKARQVFDQMREKDE
Sbjct: 307 WTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDE 366

Query: 301 GTWSAMIKVYERKGFELEALELFRMMQREGIRPNFPSLISVLSVCASLANLDHGREIHAQ 360
           GTWSAMIKVYERKG EL+ALELFRMMQREGIRPNFPSLISVLSVCA LANLDHGREIHAQ
Sbjct: 367 GTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQ 426

Query: 361 LVRSQFDLDVYVASVLLTMYIKCGNLVKAKQVFDRFAIKDVVMWNSIITGYAQHGLGEEA 420
           LVRSQFDLDVYVASVLL+MYIKCGNL KAKQVFDRFA+KDVVMWNSIITGYAQHGLG EA
Sbjct: 427 LVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEA 486

Query: 421 LRVFHDMHFSGIMPDDITFVGVLSACSYTGNVKKGLEIFNSMETNYQVDPKTEHYACMVD 480
           LRVFHDMHFSGIMPDD+TFVGVLSACSYTGNVKKGLEIFNSMET YQV+ K EHYACMVD
Sbjct: 487 LRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVD 546

Query: 481 LLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 540
           LLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLL LEPKNAGP
Sbjct: 547 LLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGP 606

Query: 541 YILLSNIYASQGRWGDVAELRRNMRDRSVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHYE 600
           +ILLSNIYASQGRW DVAELRRNMRDR VSKYPGCSWIVVEKKVHKFTGGDSSGHPEH E
Sbjct: 607 FILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSE 666

Query: 601 INRILEWLSGLLREAGYYPDRSFVLHDVDEEEKVQSLGYHSEKLAVAYGILKIPKGMPIR 660
           INRILEWLSGLLREAGYYPD+SFVLHDVDEEEKVQSL YHSEKLAVAYG+LKIP GMPIR
Sbjct: 667 INRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIR 726

Query: 661 VMKNLRVCGDCHTAIKLISKVTGREIILRDANRFHHFKDGSCSCQDYW 709
           VMKNLRVCGDCH AIKLI+KVTGREIILRDANRFHHFKDGSCSC+DYW
Sbjct: 727 VMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW 774

[Close]

BLAST of Lsi01G017430 vs. NCBI nr
Match: XP_038881161.1 (pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 1376.3 bits (3561), Expect = 0.0e+00
Identity = 668/708 (94.35%), Postives = 689/708 (97.32%), Query Frame = 0


Query: 1   MSSGLMFFRLVLNRFYSSTLGISSNSLIARYSRLGQIEKARAVFDEMRDKSIVSWNSIVA 60
           MSSGL+FFRLVLNRFY STLGISSNSLIARYSRLGQIEKARAVFDEMRDKSIVSWNSIVA
Sbjct: 1   MSSGLVFFRLVLNRFYCSTLGISSNSLIARYSRLGQIEKARAVFDEMRDKSIVSWNSIVA 60

Query: 61  GYFQNNRPVEAQNMFDKMSERNTISWNGLISGYIKNGMINEARKVFDRMPERNVVSWTAM 120
           GYFQNNRP EAQNMFDKMSERNTISWNGLISGYIKNGM+NEARK FDRMPERNVVSWTAM
Sbjct: 61  GYFQNNRPEEAQNMFDKMSERNTISWNGLISGYIKNGMLNEARKAFDRMPERNVVSWTAM 120

Query: 121 VRGYVKQGMISEAETLFWQMPEKNVVSWTVMLGGLIQERRIDEACRLFDMMPEKDVVART 180
           VRGYVK+GMISEAE+LFWQMPEKNVVSWTVMLGGLIQ+ RIDEA RLF+MMPEKDVVART
Sbjct: 121 VRGYVKEGMISEAESLFWQMPEKNVVSWTVMLGGLIQDGRIDEAFRLFNMMPEKDVVART 180

Query: 181 NMIGGYCQEGRLVEARRLFDEMPRRNVVSWTMMITGYVQNQQVDIARKLFEVMPEKNEVS 240
            MIGGYCQEG LVEARRLFDEMPRRNVVSWT+MITGY+QNQQVDIARKLFEVMPEKNEVS
Sbjct: 181 TMIGGYCQEGFLVEARRLFDEMPRRNVVSWTVMITGYLQNQQVDIARKLFEVMPEKNEVS 240

Query: 241 WTAMLMGYTNCGRLDEASELFDSMPIKSVVACNAMILGFSQNGEVPKARQVFDQMREKDE 300
           WTAMLMGYTNCGRLD+ASELF++MPI SVVACNAMILGF QNGEVPKARQVFDQMREKDE
Sbjct: 241 WTAMLMGYTNCGRLDDASELFNAMPIGSVVACNAMILGFGQNGEVPKARQVFDQMREKDE 300

Query: 301 GTWSAMIKVYERKGFELEALELFRMMQREGIRPNFPSLISVLSVCASLANLDHGREIHAQ 360
           GTWSAMIKVYERKGFELEALELFRMMQREGIRPNFPSLISVLSVCASLANLDHGREIHAQ
Sbjct: 301 GTWSAMIKVYERKGFELEALELFRMMQREGIRPNFPSLISVLSVCASLANLDHGREIHAQ 360

Query: 361 LVRSQFDLDVYVASVLLTMYIKCGNLVKAKQVFDRFAIKDVVMWNSIITGYAQHGLGEEA 420
           LVRSQFDLDVYVASVLLT YIKCGNLVKA+QVFDRF  KDVVMWNSIITGYAQHGLGEEA
Sbjct: 361 LVRSQFDLDVYVASVLLTTYIKCGNLVKAQQVFDRFPSKDVVMWNSIITGYAQHGLGEEA 420

Query: 421 LRVFHDMHFSGIMPDDITFVGVLSACSYTGNVKKGLEIFNSMETNYQVDPKTEHYACMVD 480
           LRVFHDMHFSGIMPDDITFVGVLSACSYTGNVKKGLEIFNSMET YQ++ KTEHYACMVD
Sbjct: 421 LRVFHDMHFSGIMPDDITFVGVLSACSYTGNVKKGLEIFNSMETKYQLEQKTEHYACMVD 480

Query: 481 LLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 540
           LLGRAGKL+EAMDLIE+MPMEADA+IWGALLGACRTHMKLDLAEVAAKKLLQLEPKNAGP
Sbjct: 481 LLGRAGKLHEAMDLIERMPMEADAVIWGALLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 540

Query: 541 YILLSNIYASQGRWGDVAELRRNMRDRSVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHYE 600
           YILLSNIYASQGRWGDVAELRRNMRDRSVSKYPGCSWIVVEKKVH FTGGDSSGHPEH E
Sbjct: 541 YILLSNIYASQGRWGDVAELRRNMRDRSVSKYPGCSWIVVEKKVHNFTGGDSSGHPEHSE 600

Query: 601 INRILEWLSGLLREAGYYPDRSFVLHDVDEEEKVQSLGYHSEKLAVAYGILKIPKGMPIR 660
           INRILEWLSGLLREAGY PDRSFVLHD+DEEEK QSLGYHSEKLAVAYG+LKIPKGMPIR
Sbjct: 601 INRILEWLSGLLREAGYCPDRSFVLHDIDEEEKAQSLGYHSEKLAVAYGLLKIPKGMPIR 660

Query: 661 VMKNLRVCGDCHTAIKLISKVTGREIILRDANRFHHFKDGSCSCQDYW 709
           VMKNLRVCGDCHTAIKLI+KVTGRE+ILRDANRFHHFK GSCSCQDYW
Sbjct: 661 VMKNLRVCGDCHTAIKLIAKVTGREVILRDANRFHHFKGGSCSCQDYW 708

[Close]

BLAST of Lsi01G017430 vs. NCBI nr
Match: XP_008455763.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like [Cucumis melo] >KAA0025765.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1359.7 bits (3518), Expect = 0.0e+00
Identity = 662/708 (93.50%), Postives = 679/708 (95.90%), Query Frame = 0


Query: 1   MSSGLMFFRLVLNRFYSSTLGISSNSLIARYSRLGQIEKARAVFDEMRDKSIVSWNSIVA 60
           M SGLMFFRLVLNRFYSS   ISSN+LIARYSRLGQIEKARAVFDEMRDK+I+SWNSIVA
Sbjct: 1   MFSGLMFFRLVLNRFYSSNFIISSNALIARYSRLGQIEKARAVFDEMRDKNIISWNSIVA 60

Query: 61  GYFQNNRPVEAQNMFDKMSERNTISWNGLISGYIKNGMINEARKVFDRMPERNVVSWTAM 120
           GYFQN RP EAQNMFDKMSERNTISWNGLISGYI NGMINEARKVFDRMPERNVVSWTAM
Sbjct: 61  GYFQNKRPQEAQNMFDKMSERNTISWNGLISGYINNGMINEARKVFDRMPERNVVSWTAM 120

Query: 121 VRGYVKQGMISEAETLFWQMPEKNVVSWTVMLGGLIQERRIDEACRLFDMMPEKDVVART 180
           VRGYVK+G+ISEAETLFWQMPEKNVVSWTVMLGGLIQE R+DEACRLFDMMPEKDVV RT
Sbjct: 121 VRGYVKEGIISEAETLFWQMPEKNVVSWTVMLGGLIQEGRMDEACRLFDMMPEKDVVTRT 180

Query: 181 NMIGGYCQEGRLVEARRLFDEMPRRNVVSWTMMITGYVQNQQVDIARKLFEVMPEKNEVS 240
           NMIGGYCQ GRLVEARRLFDEMP RNVVSWT MITGYVQNQQVDIARKLFEVMPEKNEVS
Sbjct: 181 NMIGGYCQVGRLVEARRLFDEMPCRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVS 240

Query: 241 WTAMLMGYTNCGRLDEASELFDSMPIKSVVACNAMILGFSQNGEVPKARQVFDQMREKDE 300
           WTAML GYTNCGRLDEAS LF++MPIKSVVACNAMIL F QNGEVPKARQVFD+MREKDE
Sbjct: 241 WTAMLKGYTNCGRLDEASGLFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDEMREKDE 300

Query: 301 GTWSAMIKVYERKGFELEALELFRMMQREGIRPNFPSLISVLSVCASLANLDHGREIHAQ 360
           GTWSAMIKVYERKG EL+ALELFRMMQREGIRPNFPSLISVLSVCA LANLDHGREIHAQ
Sbjct: 301 GTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQ 360

Query: 361 LVRSQFDLDVYVASVLLTMYIKCGNLVKAKQVFDRFAIKDVVMWNSIITGYAQHGLGEEA 420
           LVRSQFDLDVYVASVLL+MYIKCGNL KAKQVFDRFA+KDVVMWNSIITGYAQHGLGEEA
Sbjct: 361 LVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGEEA 420

Query: 421 LRVFHDMHFSGIMPDDITFVGVLSACSYTGNVKKGLEIFNSMETNYQVDPKTEHYACMVD 480
           LRVFHDMHFSGIMPDDITFVGVLSACSYTGNVKKGLEIF SMET YQV+ K EHYACMVD
Sbjct: 421 LRVFHDMHFSGIMPDDITFVGVLSACSYTGNVKKGLEIFYSMETKYQVEQKIEHYACMVD 480

Query: 481 LLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 540
           LLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLL LEPKNAGP
Sbjct: 481 LLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLYLEPKNAGP 540

Query: 541 YILLSNIYASQGRWGDVAELRRNMRDRSVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHYE 600
           +ILLSNIYASQGRWGDVAELRRNMRDR VSKYPGCSWIVVEKKVHKFTGGDSSGHPEH E
Sbjct: 541 FILLSNIYASQGRWGDVAELRRNMRDRHVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSE 600

Query: 601 INRILEWLSGLLREAGYYPDRSFVLHDVDEEEKVQSLGYHSEKLAVAYGILKIPKGMPIR 660
           INRILEWLSGLLREAGYYPD+SFVLHDVDEEEKVQSL YHSEKLAVAYG+ KIPKGMPIR
Sbjct: 601 INRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLFKIPKGMPIR 660

Query: 661 VMKNLRVCGDCHTAIKLISKVTGREIILRDANRFHHFKDGSCSCQDYW 709
           VMKNLRVCGDCH AIKLI+KVTGREIILRDANRFHHFKDGSCSCQDYW
Sbjct: 661 VMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCQDYW 708

[Close]

BLAST of Lsi01G017430 vs. NCBI nr
Match: TYK09689.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1359.7 bits (3518), Expect = 0.0e+00
Identity = 662/708 (93.50%), Postives = 679/708 (95.90%), Query Frame = 0


Query: 1   MSSGLMFFRLVLNRFYSSTLGISSNSLIARYSRLGQIEKARAVFDEMRDKSIVSWNSIVA 60
           M SGLMFFRLVLNRFYSS   ISSN+LIARYSRLGQIEKARAVFDEMRDK+I+SWNSIVA
Sbjct: 55  MFSGLMFFRLVLNRFYSSNFIISSNALIARYSRLGQIEKARAVFDEMRDKNIISWNSIVA 114

Query: 61  GYFQNNRPVEAQNMFDKMSERNTISWNGLISGYIKNGMINEARKVFDRMPERNVVSWTAM 120
           GYFQN RP EAQNMFDKMSERNTISWNGLISGYI NGMINEARKVFDRMPERNVVSWTAM
Sbjct: 115 GYFQNKRPQEAQNMFDKMSERNTISWNGLISGYINNGMINEARKVFDRMPERNVVSWTAM 174

Query: 121 VRGYVKQGMISEAETLFWQMPEKNVVSWTVMLGGLIQERRIDEACRLFDMMPEKDVVART 180
           VRGYVK+G+ISEAETLFWQMPEKNVVSWTVMLGGLIQE R+DEACRLFDMMPEKDVV RT
Sbjct: 175 VRGYVKEGIISEAETLFWQMPEKNVVSWTVMLGGLIQEGRMDEACRLFDMMPEKDVVTRT 234

Query: 181 NMIGGYCQEGRLVEARRLFDEMPRRNVVSWTMMITGYVQNQQVDIARKLFEVMPEKNEVS 240
           NMIGGYCQ GRLVEARRLFDEMP RNVVSWT MITGYVQNQQVDIARKLFEVMPEKNEVS
Sbjct: 235 NMIGGYCQVGRLVEARRLFDEMPCRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVS 294

Query: 241 WTAMLMGYTNCGRLDEASELFDSMPIKSVVACNAMILGFSQNGEVPKARQVFDQMREKDE 300
           WTAML GYTNCGRLDEAS LF++MPIKSVVACNAMIL F QNGEVPKARQVFD+MREKDE
Sbjct: 295 WTAMLKGYTNCGRLDEASGLFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDEMREKDE 354

Query: 301 GTWSAMIKVYERKGFELEALELFRMMQREGIRPNFPSLISVLSVCASLANLDHGREIHAQ 360
           GTWSAMIKVYERKG EL+ALELFRMMQREGIRPNFPSLISVLSVCA LANLDHGREIHAQ
Sbjct: 355 GTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQ 414

Query: 361 LVRSQFDLDVYVASVLLTMYIKCGNLVKAKQVFDRFAIKDVVMWNSIITGYAQHGLGEEA 420
           LVRSQFDLDVYVASVLL+MYIKCGNL KAKQVFDRFA+KDVVMWNSIITGYAQHGLGEEA
Sbjct: 415 LVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGEEA 474

Query: 421 LRVFHDMHFSGIMPDDITFVGVLSACSYTGNVKKGLEIFNSMETNYQVDPKTEHYACMVD 480
           LRVFHDMHFSGIMPDDITFVGVLSACSYTGNVKKGLEIF SMET YQV+ K EHYACMVD
Sbjct: 475 LRVFHDMHFSGIMPDDITFVGVLSACSYTGNVKKGLEIFYSMETKYQVEQKIEHYACMVD 534

Query: 481 LLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 540
           LLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLL LEPKNAGP
Sbjct: 535 LLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLYLEPKNAGP 594

Query: 541 YILLSNIYASQGRWGDVAELRRNMRDRSVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHYE 600
           +ILLSNIYASQGRWGDVAELRRNMRDR VSKYPGCSWIVVEKKVHKFTGGDSSGHPEH E
Sbjct: 595 FILLSNIYASQGRWGDVAELRRNMRDRHVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSE 654

Query: 601 INRILEWLSGLLREAGYYPDRSFVLHDVDEEEKVQSLGYHSEKLAVAYGILKIPKGMPIR 660
           INRILEWLSGLLREAGYYPD+SFVLHDVDEEEKVQSL YHSEKLAVAYG+ KIPKGMPIR
Sbjct: 655 INRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLFKIPKGMPIR 714

Query: 661 VMKNLRVCGDCHTAIKLISKVTGREIILRDANRFHHFKDGSCSCQDYW 709
           VMKNLRVCGDCH AIKLI+KVTGREIILRDANRFHHFKDGSCSCQDYW
Sbjct: 715 VMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCQDYW 762

[Close]

BLAST of Lsi01G017430 vs. NCBI nr
Match: XP_022158877.1 (pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like isoform X1 [Momordica charantia] >XP_022158878.1 pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like isoform X1 [Momordica charantia] >XP_022158879.1 pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like isoform X1 [Momordica charantia] >XP_022158880.1 pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like isoform X1 [Momordica charantia] >XP_022158881.1 pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like isoform X1 [Momordica charantia])

HSP 1 Score: 1355.9 bits (3508), Expect = 0.0e+00
Identity = 655/708 (92.51%), Postives = 683/708 (96.47%), Query Frame = 0


Query: 1   MSSGLMFFRLVLNRFYSSTLGISSNSLIARYSRLGQIEKARAVFDEMRDKSIVSWNSIVA 60
           MSSGLMFFRLVL+RFY ST+GISSNSLIARYSRLGQIEKAR+VFD+MR+KSIVSWNSIVA
Sbjct: 1   MSSGLMFFRLVLDRFYCSTVGISSNSLIARYSRLGQIEKARSVFDQMREKSIVSWNSIVA 60

Query: 61  GYFQNNRPVEAQNMFDKMSERNTISWNGLISGYIKNGMINEARKVFDRMPERNVVSWTAM 120
           GYFQNN+P EAQNMFDKMSERNTISWNGL+SGYIKNGMI+EARKVFD+MPERNVVSWTAM
Sbjct: 61  GYFQNNQPEEAQNMFDKMSERNTISWNGLVSGYIKNGMISEARKVFDKMPERNVVSWTAM 120

Query: 121 VRGYVKQGMISEAETLFWQMPEKNVVSWTVMLGGLIQERRIDEACRLFDMMPEKDVVART 180
           VRGYVK+GMI EAETLFWQMPEKNVVSWTVMLGGLIQE RIDEACRLFDMMPEKDVVART
Sbjct: 121 VRGYVKEGMIYEAETLFWQMPEKNVVSWTVMLGGLIQEGRIDEACRLFDMMPEKDVVART 180

Query: 181 NMIGGYCQEGRLVEARRLFDEMPRRNVVSWTMMITGYVQNQQVDIARKLFEVMPEKNEVS 240
           NMIGGYCQ+GRL+EARRLFDEMPRRNVVSWTMMITGYVQNQQVDIARKLFEVMPEKNEVS
Sbjct: 181 NMIGGYCQKGRLIEARRLFDEMPRRNVVSWTMMITGYVQNQQVDIARKLFEVMPEKNEVS 240

Query: 241 WTAMLMGYTNCGRLDEASELFDSMPIKSVVACNAMILGFSQNGEVPKARQVFDQMREKDE 300
           WTAMLMGY NCGRLDEASELFD+MPIKSVV+CNAMILGF QNGEVPKA QVFDQM EKDE
Sbjct: 241 WTAMLMGYINCGRLDEASELFDAMPIKSVVSCNAMILGFGQNGEVPKATQVFDQMIEKDE 300

Query: 301 GTWSAMIKVYERKGFELEALELFRMMQREGIRPNFPSLISVLSVCASLANLDHGREIHAQ 360
           G+WSAMIKVYERKG ELEALELFR MQREGIRPNFPSLISVLSVCASLANLDHGRE+HAQ
Sbjct: 301 GSWSAMIKVYERKGSELEALELFRSMQREGIRPNFPSLISVLSVCASLANLDHGREVHAQ 360

Query: 361 LVRSQFDLDVYVASVLLTMYIKCGNLVKAKQVFDRFAIKDVVMWNSIITGYAQHGLGEEA 420
           LVRSQFDLDVYVASVL+TMY+KCGNLVKAKQVFDRF IKDVVMWNSIITGYAQHGLGEEA
Sbjct: 361 LVRSQFDLDVYVASVLITMYVKCGNLVKAKQVFDRFPIKDVVMWNSIITGYAQHGLGEEA 420

Query: 421 LRVFHDMHFSGIMPDDITFVGVLSACSYTGNVKKGLEIFNSMETNYQVDPKTEHYACMVD 480
           L+VFHDMHFSG+MPDDITFVGVLSACSYTGNVKKGLEIFNSME  Y V+ KTEHYACMVD
Sbjct: 421 LQVFHDMHFSGVMPDDITFVGVLSACSYTGNVKKGLEIFNSMEPKYHVERKTEHYACMVD 480

Query: 481 LLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 540
           LLGRAGKLNEAM LIEKMPMEADAIIWGALLGACR HMKLDLAE+AAKKLL+LEPKNAGP
Sbjct: 481 LLGRAGKLNEAMGLIEKMPMEADAIIWGALLGACRIHMKLDLAEIAAKKLLELEPKNAGP 540

Query: 541 YILLSNIYASQGRWGDVAELRRNMRDRSVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHYE 600
           YILLSNIYASQGRW DV ELRRNMRDRSVSK PGCSWI VEKKVH FTGGDS GHPEH E
Sbjct: 541 YILLSNIYASQGRWSDVVELRRNMRDRSVSKSPGCSWIDVEKKVHMFTGGDSMGHPEHSE 600

Query: 601 INRILEWLSGLLREAGYYPDRSFVLHDVDEEEKVQSLGYHSEKLAVAYGILKIPKGMPIR 660
           I RIL+WLSGLLREAGYYPDRSFVLHDVDEEEKVQSLGYHSEKLAVAYG+LKIPKGMPIR
Sbjct: 601 IMRILDWLSGLLREAGYYPDRSFVLHDVDEEEKVQSLGYHSEKLAVAYGLLKIPKGMPIR 660

Query: 661 VMKNLRVCGDCHTAIKLISKVTGREIILRDANRFHHFKDGSCSCQDYW 709
           VMKNLRVCGDCHTAIKLI+KV+GREIILRDANRFHHFKDGSCSC+DYW
Sbjct: 661 VMKNLRVCGDCHTAIKLIAKVSGREIILRDANRFHHFKDGSCSCKDYW 708

[Close]

BLAST of Lsi01G017430 vs. NCBI nr
Match: XP_011653842.1 (pentatricopeptide repeat-containing protein At1g56690, mitochondrial [Cucumis sativus] >XP_031740138.1 pentatricopeptide repeat-containing protein At1g56690, mitochondrial [Cucumis sativus] >KAE8649658.1 hypothetical protein Csa_012542 [Cucumis sativus])

HSP 1 Score: 1352.4 bits (3499), Expect = 0.0e+00
Identity = 657/708 (92.80%), Postives = 675/708 (95.34%), Query Frame = 0


Query: 1   MSSGLMFFRLVLNRFYSSTLGISSNSLIARYSRLGQIEKARAVFDEMRDKSIVSWNSIVA 60
           M SGLMFFRLVLNRFY S   IS NSLI RYSRLGQIEKAR VFDEMRDK+I+SWNSIVA
Sbjct: 1   MFSGLMFFRLVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVA 60

Query: 61  GYFQNNRPVEAQNMFDKMSERNTISWNGLISGYIKNGMINEARKVFDRMPERNVVSWTAM 120
           GYFQN RP EAQNMFDKMSERNTISWNGL+SGYI NGMINEAR+VFDRMPERNVVSWTAM
Sbjct: 61  GYFQNKRPQEAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAM 120

Query: 121 VRGYVKQGMISEAETLFWQMPEKNVVSWTVMLGGLIQERRIDEACRLFDMMPEKDVVART 180
           VRGYVK+GMISEAETLFWQMPEKNVVSWTVMLGGL+QE RIDEACRLFDMMPEKDVV RT
Sbjct: 121 VRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRT 180

Query: 181 NMIGGYCQEGRLVEARRLFDEMPRRNVVSWTMMITGYVQNQQVDIARKLFEVMPEKNEVS 240
           NMIGGYCQ GRLVEAR LFDEMPRRNVVSWT MITGYVQNQQVDIARKLFEVMPEKNEVS
Sbjct: 181 NMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVS 240

Query: 241 WTAMLMGYTNCGRLDEASELFDSMPIKSVVACNAMILGFSQNGEVPKARQVFDQMREKDE 300
           WTAML GYTNCGRLDEASELF++MPIKSVVACNAMIL F QNGEVPKARQVFDQMREKDE
Sbjct: 241 WTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDE 300

Query: 301 GTWSAMIKVYERKGFELEALELFRMMQREGIRPNFPSLISVLSVCASLANLDHGREIHAQ 360
           GTWSAMIKVYERKG EL+ALELFRMMQREGIRPNFPSLISVLSVCA LANLDHGREIHAQ
Sbjct: 301 GTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQ 360

Query: 361 LVRSQFDLDVYVASVLLTMYIKCGNLVKAKQVFDRFAIKDVVMWNSIITGYAQHGLGEEA 420
           LVRSQFDLDVYVASVLL+MYIKCGNL KAKQVFDRFA+KDVVMWNSIITGYAQHGLG EA
Sbjct: 361 LVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEA 420

Query: 421 LRVFHDMHFSGIMPDDITFVGVLSACSYTGNVKKGLEIFNSMETNYQVDPKTEHYACMVD 480
           LRVFHDMHFSGIMPDD+TFVGVLSACSYTGNVKKGLEIFNSMET YQV+ K EHYACMVD
Sbjct: 421 LRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVD 480

Query: 481 LLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLQLEPKNAGP 540
           LLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLL LEPKNAGP
Sbjct: 481 LLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGP 540

Query: 541 YILLSNIYASQGRWGDVAELRRNMRDRSVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHYE 600
           +ILLSNIYASQGRW DVAELRRNMRDR VSKYPGCSWIVVEKKVHKFTGGDSSGHPEH E
Sbjct: 541 FILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSE 600

Query: 601 INRILEWLSGLLREAGYYPDRSFVLHDVDEEEKVQSLGYHSEKLAVAYGILKIPKGMPIR 660
           INRILEWLSGLLREAGYYPD+SFVLHDVDEEEKVQSL YHSEKLAVAYG+LKIP GMPIR
Sbjct: 601 INRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIR 660

Query: 661 VMKNLRVCGDCHTAIKLISKVTGREIILRDANRFHHFKDGSCSCQDYW 709
           VMKNLRVCGDCH AIKLI+KVTGREIILRDANRFHHFKDGSCSC+DYW
Sbjct: 661 VMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW 708

[Close]

BLAST of Lsi01G017430 vs. TAIR 10
Match: AT1G56690.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 1004.6 bits (2596), Expect = 4.0e-293
Identity = 466/700 (66.57%), Postives = 578/700 (82.57%), Query Frame = 0


Query: 9   RLVLNRFYSSTLGISSNSLIARYSRLGQIEKARAVFDEMRDKSIVSWNSIVAGYFQNNRP 68
           +L+L R Y ++ G++ +  I+R SR+G+I +AR  FD ++ K+I SWNSIV+GYF N  P
Sbjct: 5   KLILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLP 64

Query: 69  VEAQNMFDKMSERNTISWNGLISGYIKNGMINEARKVFDRMPERNVVSWTAMVRGYVKQG 128
            EA+ +FD+MSERN +SWNGL+SGYIKN MI EAR VF+ MPERNVVSWTAMV+GY+++G
Sbjct: 65  KEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEG 124

Query: 129 MISEAETLFWQMPEKNVVSWTVMLGGLIQERRIDEACRLFDMMPEKDVVARTNMIGGYCQ 188
           M+ EAE+LFW+MPE+N VSWTVM GGLI + RID+A +L+DMMP KDVVA TNMIGG C+
Sbjct: 125 MVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCR 184

Query: 189 EGRLVEARRLFDEMPRRNVVSWTMMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLMGY 248
           EGR+ EAR +FDEM  RNVV+WT MITGY QN +VD+ARKLFEVMPEK EVSWT+ML+GY
Sbjct: 185 EGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGY 244

Query: 249 TNCGRLDEASELFDSMPIKSVVACNAMILGFSQNGEVPKARQVFDQMREKDEGTWSAMIK 308
           T  GR+++A E F+ MP+K V+ACNAMI+GF + GE+ KAR+VFD M ++D  TW  MIK
Sbjct: 245 TLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIK 304

Query: 309 VYERKGFELEALELFRMMQREGIRPNFPSLISVLSVCASLANLDHGREIHAQLVRSQFDL 368
            YERKGFELEAL+LF  MQ++G+RP+FPSLIS+LSVCA+LA+L +GR++HA LVR QFD 
Sbjct: 305 AYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDD 364

Query: 369 DVYVASVLLTMYIKCGNLVKAKQVFDRFAIKDVVMWNSIITGYAQHGLGEEALRVFHDMH 428
           DVYVASVL+TMY+KCG LVKAK VFDRF+ KD++MWNSII+GYA HGLGEEAL++FH+M 
Sbjct: 365 DVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMP 424

Query: 429 FSGIMPDDITFVGVLSACSYTGNVKKGLEIFNSMETNYQVDPKTEHYACMVDLLGRAGKL 488
            SG MP+ +T + +L+ACSY G +++GLEIF SME+ + V P  EHY+C VD+LGRAG++
Sbjct: 425 SSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQV 484

Query: 489 NEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIY 548
           ++AM+LIE M ++ DA +WGALLGAC+TH +LDLAEVAAKKL + EP NAG Y+LLS+I 
Sbjct: 485 DKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSIN 544

Query: 549 ASQGRWGDVAELRRNMRDRSVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHYEINRILEWL 608
           AS+ +WGDVA +R+NMR  +VSK+PGCSWI V KKVH FT G    HPE   I  +LE  
Sbjct: 545 ASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKT 604

Query: 609 SGLLREAGYYPDRSFVLHDVDEEEKVQSLGYHSEKLAVAYGILKIPKGMPIRVMKNLRVC 668
            GLLREAGY PD S VLHDVDEEEKV SL  HSE+LAVAYG+LK+P+G+PIRVMKNLRVC
Sbjct: 605 DGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVC 664

Query: 669 GDCHTAIKLISKVTGREIILRDANRFHHFKDGSCSCQDYW 709
           GDCH AIKLISKVT REIILRDANRFHHF +G CSC+DYW
Sbjct: 665 GDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704

[Close]

BLAST of Lsi01G017430 vs. TAIR 10
Match: AT1G09410.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 975.7 bits (2521), Expect = 2.0e-284
Identity = 452/702 (64.39%), Postives = 574/702 (81.77%), Query Frame = 0


Query: 9   RLVLNRFYSSTL-GISSNSLIARYSRLGQIEKARAVFDEMRDKSIVSWNSIVAGYFQNNR 68
           +++L R YS+T+   ++N  I   SR+G+I +AR +FD    KSI SWNS+VAGYF N  
Sbjct: 4   QILLRRTYSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLM 63

Query: 69  PVEAQNMFDKMSERNTISWNGLISGYIKNGMINEARKVFDRMPERNVVSWTAMVRGYVKQ 128
           P +A+ +FD+M +RN ISWNGL+SGY+KNG I+EARKVFD MPERNVVSWTA+V+GYV  
Sbjct: 64  PRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHN 123

Query: 129 GMISEAETLFWQMPEKNVVSWTVMLGGLIQERRIDEACRLFDMMPEKDVVARTNMIGGYC 188
           G +  AE+LFW+MPEKN VSWTVML G +Q+ RID+AC+L++M+P+KD +ART+MI G C
Sbjct: 124 GKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLC 183

Query: 189 QEGRLVEARRLFDEMPRRNVVSWTMMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLMG 248
           +EGR+ EAR +FDEM  R+V++WT M+TGY QN +VD ARK+F+VMPEK EVSWT+MLMG
Sbjct: 184 KEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMG 243

Query: 249 YTNCGRLDEASELFDSMPIKSVVACNAMILGFSQNGEVPKARQVFDQMREKDEGTWSAMI 308
           Y   GR+++A ELF+ MP+K V+ACNAMI G  Q GE+ KAR+VFD M+E+++ +W  +I
Sbjct: 244 YVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVI 303

Query: 309 KVYERKGFELEALELFRMMQREGIRPNFPSLISVLSVCASLANLDHGREIHAQLVRSQFD 368
           K++ER GFELEAL+LF +MQ++G+RP FP+LIS+LSVCASLA+L HG+++HAQLVR QFD
Sbjct: 304 KIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFD 363

Query: 369 LDVYVASVLLTMYIKCGNLVKAKQVFDRFAIKDVVMWNSIITGYAQHGLGEEALRVFHDM 428
           +DVYVASVL+TMYIKCG LVK+K +FDRF  KD++MWNSII+GYA HGLGEEAL+VF +M
Sbjct: 364 VDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEM 423

Query: 429 HFSG-IMPDDITFVGVLSACSYTGNVKKGLEIFNSMETNYQVDPKTEHYACMVDLLGRAG 488
             SG   P+++TFV  LSACSY G V++GL+I+ SME+ + V P T HYACMVD+LGRAG
Sbjct: 424 PLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAG 483

Query: 489 KLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSN 548
           + NEAM++I+ M +E DA +WG+LLGACRTH +LD+AE  AKKL+++EP+N+G YILLSN
Sbjct: 484 RFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSN 543

Query: 549 IYASQGRWGDVAELRRNMRDRSVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHYEINRILE 608
           +YASQGRW DVAELR+ M+ R V K PGCSW  VE KVH FT G  + HPE   I +IL+
Sbjct: 544 MYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILD 603

Query: 609 WLSGLLREAGYYPDRSFVLHDVDEEEKVQSLGYHSEKLAVAYGILKIPKGMPIRVMKNLR 668
            L GLLREAGY PD S+ LHDVDEEEKV SL YHSE+LAVAY +LK+ +G+PIRVMKNLR
Sbjct: 604 ELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLR 663

Query: 669 VCGDCHTAIKLISKVTGREIILRDANRFHHFKDGSCSCQDYW 709
           VC DCHTAIK+ISKV  REIILRDANRFHHF++G CSC+DYW
Sbjct: 664 VCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705

[Close]

BLAST of Lsi01G017430 vs. TAIR 10
Match: AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 740.0 bits (1909), Expect = 1.8e-213
Identity = 349/687 (50.80%), Postives = 477/687 (69.43%), Query Frame = 0


Query: 22  ISSNSLIARYSRLGQIEKARAVFDEMRDKSIVSWNSIVAGYFQNNRPVEAQNMFDKMSER 81
           +S N +I+ Y R G+ E AR +FDEM ++ +VSWN ++ GY +N    +A+ +F+ M ER
Sbjct: 96  VSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPER 155

Query: 82  NTISWNGLISGYIKNGMINEARKVFDRMPERNVVSWTAMVRGYVKQGMISEAETLFWQMP 141
           +  SWN ++SGY +NG +++AR VFDRMPE+N VSW A++  YV+   + EA  LF    
Sbjct: 156 DVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRE 215

Query: 142 EKNVVSWTVMLGGLIQERRIDEACRLFDMMPEKDVVARTNMIGGYCQEGRLVEARRLFDE 201
              +VSW  +LGG +++++I EA + FD M  +DVV+   +I GY Q G++ EAR+LFDE
Sbjct: 216 NWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE 275

Query: 202 MPRRNVVSWTMMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLMGYTNCGRLDEASELF 261
            P ++V +WT M++GY+QN+ V+ AR+LF+ MPE+NEVSW AML GY    R++ A ELF
Sbjct: 276 SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELF 335

Query: 262 DSMPIKSVVACNAMILGFSQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGFELEALE 321
           D MP ++V   N MI G++Q G++ +A+ +FD+M ++D  +W+AMI  Y + G   EAL 
Sbjct: 336 DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALR 395

Query: 322 LFRMMQREGIRPNFPSLISVLSVCASLANLDHGREIHAQLVRSQFDLDVYVASVLLTMYI 381
           LF  M+REG R N  S  S LS CA +  L+ G+++H +LV+  ++   +V + LL MY 
Sbjct: 396 LFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYC 455

Query: 382 KCGNLVKAKQVFDRFAIKDVVMWNSIITGYAQHGLGEEALRVFHDMHFSGIMPDDITFVG 441
           KCG++ +A  +F   A KD+V WN++I GY++HG GE ALR F  M   G+ PDD T V 
Sbjct: 456 KCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVA 515

Query: 442 VLSACSYTGNVKKGLEIFNSMETNYQVDPKTEHYACMVDLLGRAGKLNEAMDLIEKMPME 501
           VLSACS+TG V KG + F +M  +Y V P ++HYACMVDLLGRAG L +A +L++ MP E
Sbjct: 516 VLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFE 575

Query: 502 ADAIIWGALLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYILLSNIYASQGRWGDVAELR 561
            DA IWG LLGA R H   +LAE AA K+  +EP+N+G Y+LLSN+YAS GRWGDV +LR
Sbjct: 576 PDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLR 635

Query: 562 RNMRDRSVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHYEINRILEWLSGLLREAGYYPDR 621
             MRD+ V K PG SWI ++ K H F+ GD   HPE  EI   LE L   +++AGY    
Sbjct: 636 VRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEF-HPEKDEIFAFLEELDLRMKKAGYVSKT 695

Query: 622 SFVLHDVDEEEKVQSLGYHSEKLAVAYGILKIPKGMPIRVMKNLRVCGDCHTAIKLISKV 681
           S VLHDV+EEEK + + YHSE+LAVAYGI+++  G PIRV+KNLRVC DCH AIK ++++
Sbjct: 696 SVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARI 755

Query: 682 TGREIILRDANRFHHFKDGSCSCQDYW 709
           TGR IILRD NRFHHFKDGSCSC DYW
Sbjct: 756 TGRLIILRDNNRFHHFKDGSCSCGDYW 781

[Close]

BLAST of Lsi01G017430 vs. TAIR 10
Match: AT4G16835.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 550.1 bits (1416), Expect = 2.7e-156
Identity = 279/586 (47.61%), Postives = 378/586 (64.51%), Query Frame = 0


Query: 125 VKQGMISEAETLFWQMPEKNVVSWTVMLGGLIQE-RRIDEACRLFDMMPEKDVVARTNMI 184
           V+ G I  A  +F  M  KN ++W  +L G+ ++  R+ EA +LFD +PE D  +   M+
Sbjct: 72  VRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIML 131

Query: 185 GGYCQEGRLVEARRLFDEMPRRNVVSWTMMITGYVQNQQVDIARKLFEVMPEKNEVSWTA 244
             Y +     +A+  FD MP ++  SW  MITGY +  +++ AR+LF  M EKNEVSW A
Sbjct: 132 SCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNA 191

Query: 245 MLMGYTNCGRLDEASELFDSMPIKSVVACNAMILGFSQNGEVPKARQVFDQMR-EKDEGT 304
           M+ GY  CG L++AS  F   P++ VVA  AMI G+ +  +V  A  +F  M   K+  T
Sbjct: 192 MISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVT 251

Query: 305 WSAMIKVYERKGFELEALELFRMMQREGIRPNFPSLISVLSVCASLANLDHGREIHAQLV 364
           W+AMI  Y       + L+LFR M  EGIRPN   L S L  C+ L+ L  GR+IH  + 
Sbjct: 252 WNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVS 311

Query: 365 RSQFDLDVYVASVLLTMYIKCGNLVKAKQVFDRFAIKDVVMWNSIITGYAQHGLGEEALR 424
           +S    DV   + L++MY KCG L  A ++F+    KDVV WN++I+GYAQHG  ++AL 
Sbjct: 312 KSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALC 371

Query: 425 VFHDMHFSGIMPDDITFVGVLSACSYTGNVKKGLEIFNSMETNYQVDPKTEHYACMVDLL 484
           +F +M  + I PD ITFV VL AC++ G V  G+  F SM  +Y+V+P+ +HY CMVDLL
Sbjct: 372 LFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLL 431

Query: 485 GRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYI 544
           GRAGKL EA+ LI  MP    A ++G LLGACR H  ++LAE AA+KLLQL  +NA  Y+
Sbjct: 432 GRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYV 491

Query: 545 LLSNIYASQGRWGDVAELRRNMRDRSVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHYEIN 604
            L+NIYAS+ RW DVA +R+ M++ +V K PG SWI +  KVH F   D   HPE   I+
Sbjct: 492 QLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRI-HPELDSIH 551

Query: 605 RILEWLSGLLREAGYYPDRSFVLHDVDEEEKVQSLGYHSEKLAVAYGILKIPKGMPIRVM 664
           + L+ L   ++ AGY P+  F LH+V+EE+K + L +HSEKLAVA+G +K+P+G  I+V 
Sbjct: 552 KKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVF 611

Query: 665 KNLRVCGDCHTAIKLISKVTGREIILRDANRFHHFKDGSCSCQDYW 709
           KNLR+CGDCH AIK IS++  REII+RD  RFHHFKDGSCSC DYW
Sbjct: 612 KNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656

[Close]

BLAST of Lsi01G017430 vs. TAIR 10
Match: AT5G46460.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 530.0 bits (1364), Expect = 2.9e-150
Identity = 281/705 (39.86%), Postives = 410/705 (58.16%), Query Frame = 0


Query: 14  RFYSSTLGISSNS-LIARYSRLGQIEKARAVFDEMRDKSIVSWNSIVAGYFQNNRPVEAQ 73
           R +S T+   +   LI  +    +I++AR VF+++    +  +  ++ GY ++NR V+A 
Sbjct: 27  RSFSVTVEFQNREVLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDAL 86

Query: 74  NMFDKMSERNTISWNGLISGYIKNGMINEARKVFDRMPERNVVSWTAMVRGYVKQGMISE 133
           N+FD+M  R+ +SWN +ISG ++ G +N A K+FD MPER+VVSWTAMV G  + G + +
Sbjct: 87  NLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQ 146

Query: 134 AETLFWQMPEKNVVSWTVMLGGLIQERRIDEACRLFDMMPEKDVVARTNMIGGYCQEGRL 193
           AE LF+QMP K+  +W  M+ G +Q  ++D+A +LF  MP K+V++ T MI G  Q  R 
Sbjct: 147 AERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERS 206

Query: 194 VEARRLFDEMPRRNVVS----WTMMITGYVQ----NQQVDIARKLFEVMPEKNEVSWTAM 253
            EA  LF  M R  + S    +T +IT        +  + +   + ++     E    ++
Sbjct: 207 GEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASL 266

Query: 254 LMGYTNCGRLDEASELFDSMPIKSVVACNAMILGFSQNGEVPKARQVFDQMREKDEGTWS 313
           +  Y NC R+ +                               +R+VFD+   +    W+
Sbjct: 267 ITFYANCKRIGD-------------------------------SRKVFDEKVHEQVAVWT 326

Query: 314 AMIKVYERKGFELEALELFRMMQREGIRPNFPSLISVLSVCASLANLDHGREIHAQLVRS 373
           A++  Y       +AL +F  M R  I PN  +  S L+ C++L  LD G+E+H   V+ 
Sbjct: 327 ALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKL 386

Query: 374 QFDLDVYVASVLLTMYIKCGNLVKAKQVFDRFAIKDVVMWNSIITGYAQHGLGEEALRVF 433
             + D +V + L+ MY   GN+  A  VF +   K +V WNSII G AQHG G+ A  +F
Sbjct: 387 GLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIF 446

Query: 434 HDMHFSGIMPDDITFVGVLSACSYTGNVKKGLEIFNSMETNY-QVDPKTEHYACMVDLLG 493
             M      PD+ITF G+LSACS+ G ++KG ++F  M +    +D K +HY CMVD+LG
Sbjct: 447 GQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILG 506

Query: 494 RAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLQLEPKNAGPYIL 553
           R GKL EA +LIE+M ++ + ++W ALL ACR H  +D  E AA  +  L+ K++  Y+L
Sbjct: 507 RCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVL 566

Query: 554 LSNIYASQGRWGDVAELRRNMRDRSVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHYEINR 613
           LSNIYAS GRW +V++LR  M+   + K PG SW+V+  K H+F  GD    P    I  
Sbjct: 567 LSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGD---QPHCSRIYE 626

Query: 614 ILEWLSGLLREAGYYPDRSFVLHDVDEEEKVQSLGYHSEKLAVAYGILKIPKGMPIRVMK 673
            LE+L   L+E GY PD    LHDV++E+K + L YHSE+LA+A+G++   +G  + VMK
Sbjct: 627 KLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMK 686

Query: 674 NLRVCGDCHTAIKLISKVTGREIILRDANRFHHFKDGSCSCQDYW 709
           NLRVC DCHT IKLIS V GREI+LRD  RFHHFK+G+CSC DYW
Sbjct: 687 NLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697

The following BLAST results are available for this feature:

BLAST of Lsi01G017430 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FXB9	5.6e-292	66.57	Pentatricopeptide repeat-containing protein At1g56690, mitochondrial OS=Arabidop...	[more]
Q56XI1	2.8e-283	64.39	Pentatricopeptide repeat-containing protein At1g09410, mitochondrial OS=Arabidop...	[more]
Q9SY02	2.6e-212	50.80	Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX...	[more]
Q9M4P3	3.8e-155	47.61	Pentatricopeptide repeat-containing protein At4g16835, mitochondrial OS=Arabidop...	[more]
Q9FHF9	4.0e-149	39.86	Pentatricopeptide repeat-containing protein At5g46460, mitochondrial OS=Arabidop...	[more]

BLAST of Lsi01G017430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CHE0	0.0e+00	93.50	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5A7SMU0	0.0e+00	93.50	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3C183	0.0e+00	93.50	pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like OS=Cuc...	[more]
A0A6J1DX33	0.0e+00	92.51	pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like isofor...	[more]
A0A0A0L0T3	0.0e+00	92.80	DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G4185...	[more]

BLAST of Lsi01G017430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881161.1	0.0e+00	94.35	pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like [Benin...	[more]
XP_008455763.1	0.0e+00	93.50	PREDICTED: pentatricopeptide repeat-containing protein At1g56690, mitochondrial-...	[more]
TYK09689.1	0.0e+00	93.50	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_022158877.1	0.0e+00	92.51	pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like isofor...	[more]
XP_011653842.1	0.0e+00	92.80	pentatricopeptide repeat-containing protein At1g56690, mitochondrial [Cucumis sa...	[more]

BLAST of Lsi01G017430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G56690.1	4.0e-293	66.57	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G09410.1	2.0e-284	64.39	pentatricopeptide (PPR) repeat-containing protein	[more]
AT4G02750.1	1.8e-213	50.80	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G16835.1	2.7e-156	47.61	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G46460.1	2.9e-150	39.86	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 399..446 e-value: 5.1E-13 score: 49.0
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 239..265 e-value: 1.7E-4 score: 19.6 coord: 115..146 e-value: 1.4E-5 score: 22.9 coord: 475..500 e-value: 0.0022 score: 16.0 coord: 302..334 e-value: 5.3E-6 score: 24.3 coord: 53..82 e-value: 7.8E-4 score: 17.5 coord: 402..435 e-value: 1.6E-8 score: 32.2 coord: 84..115 e-value: 3.5E-8 score: 31.1 coord: 181..208 e-value: 3.1E-6 score: 25.0 coord: 270..299 e-value: 1.0E-5 score: 23.4 coord: 146..177 e-value: 5.1E-6 score: 24.3 coord: 25..53 e-value: 6.8E-6 score: 23.9 coord: 208..237 e-value: 4.0E-4 score: 18.4
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 53..82 e-value: 1.5E-5 score: 24.9 coord: 23..51 e-value: 1.8E-5 score: 24.6 coord: 239..265 e-value: 2.2E-6 score: 27.5 coord: 146..175 e-value: 2.5E-5 score: 24.2 coord: 84..114 e-value: 1.9E-8 score: 34.0 coord: 475..499 e-value: 0.0068 score: 16.6 coord: 115..145 e-value: 3.0E-7 score: 30.3 coord: 180..207 e-value: 4.3E-7 score: 29.8 coord: 270..298 e-value: 1.5E-5 score: 24.9 coord: 208..237 e-value: 7.6E-5 score: 22.7 coord: 302..331 e-value: 1.6E-6 score: 28.0
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 175..209 score: 11.301158
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 51..81 score: 9.393891
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 400..434 score: 12.627475
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 144..174 score: 9.810421
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 237..271 score: 10.807899
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 299..333 score: 12.002681
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 82..116 score: 12.276713
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 7..112 e-value: 1.1E-25 score: 92.1 coord: 336..452 e-value: 4.0E-25 score: 90.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 113..176 e-value: 5.5E-16 score: 60.9 coord: 177..266 e-value: 5.3E-23 score: 83.9 coord: 453..588 e-value: 3.7E-14 score: 54.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 267..329 e-value: 6.7E-9 score: 37.5
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 57..557
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 185..312
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 362..560
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 573..698 e-value: 5.1E-41 score: 139.5
None	No IPR available	PANTHER	PTHR47925	OS01G0913400 PROTEIN-RELATED	coord: 16..651
None	No IPR available	PANTHER	PTHR47925:SF3	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 16..651

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G017430.1	Lsi01G017430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding