Lsi01G017370 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi01G017370
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr01: 16140683 .. 16144308 (-)
RNA-Seq ExpressionLsi01G017370
SyntenyLsi01G017370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGTGAAATAAGAGTCACCTCCTATGGCTATTGATCCTAACTCAGCATTAAACAGCCAGCCTATTTCTTCTTCTTCATTACAAATAGTGTTTGTATTGTATGGGACCACAGCCAGCATTTATTTTAAAATCTACTCTCACTACACTAATTTAACTTCCACCTAGTATTAGCTGGTACTATGTGACTGGTCTGCGTGTGAAGATCATGCTGTCAAGTGTCACCCTAACTTTATGATTGTCTAGCTCCTCATCCAAGAGTGATTCCATAATTTATGTCAATTATATGGGTACATATACACACAACTTTTATCTTTTACCTACACCTTTAACTTAGCAGTTTTAATTTTGTAAATTTATAGTTATAGTATATCTATGATTATTAACAATTTGGAAGGTTTTCTTTCTTATAGACTTGTTTAGGGAGGGGAGGGGAGGGGAGGGGTTCTCTCTAACCCTTGCTCCTAGGTTGTTCTTTTGTTTTTGTGTGAATATATGATTTCTCAGTTTCCTATCCAAAAATAAATAAATAAACAAAAACCATTCATTTAAAGAGTAGTAAAACCAATACCCATCATGTAGTTTATTAAGATTTATGGCCAAGTGCAATTGCTTTTGAGGTTGAATATACTCATTTTTGAGATTGTGTTAGGCATTTGTGTTGATTGGGTATAGATAATTTTTCCATTGATTTCATGACTAGATTTTGATATTTTTTACCACTGGATTTGAGAGTTTTTTGGATTCTGATATATTTAGTTAGATTGAGGTAATTTATTGGTTCTGAATAGTATTAATTCAATATTCGAAATGAAAAGAATCAAAAGTTTTAAGAATAAATTTGAATATCCCAATTGCACTAATAAAAAATATAAAAAAATAAAAAAAGAACTTCTTCCCTCTTAATTATTGTTTAATTTATTTTACGATTTTGTCATTATATTCAATATTTTGATACTAAAATAAGAAGAGTTTGATTAAAATTCCTAAACTTTAGACAAACTACATTACTTTTTAATCTTATGAGGACCAATACTAAAATAGAATAAGACAAAGTAGAACCAAAGTAATACTCTAACCATTTTTAATAATTGTCATAATAATCATTATTTGTGAACCAAATAACACGTAAGTTCAGACAAATAAAGCCGTATCACATGACTGGATCTCCAAGAAATTATTCCCCTACTAAAACTTCAGCAATTATCATTTAATATAATATTAGGGGAGAGAAGAAGAAAAAACTTACATGATTCCATAAATGACCCACTTATTGTCCACGGATGAGCTGATCCCACAGCCTTGAATGCAATTGAATCCTGTCCAATTCATAAAACAGCTTTTAAAACTCTCTGTTTATATATATATATATATCTCTAAATCAATATCTATGTACAATGGCAATTAAAAGAAAGGTAATTGCTTACCGCAAGTCTACAGCATTTATGTAACCTTAATTATAGCCATCAAATTAGGACAATTATCTGGACCCAGTAACGGAAGAAAAAAAGCAACCCATCTTGCTCAAAGGCCTCAGAGGTCAACAGAGTCAATAAAATCTTGATTTTGTTTACCAAATATCAATTCCAATAGTAATGAACCTTCCAGAATAGTGTCATATCGCCTTTGATAAATAGATAATGCAGAGAATAGATGAAACCCATCTCAACTACAAAAGAGAATTATAAGATTAAAAGGATTCCCCTAATAATATTTTTCTTCCTTGGGGTCAGTTTTCTCGGTTGGGATAAAAATTATTGGATTTTGATCGCTCTTTTGTCTCATAAATTTGAAGTGAACAATGTTTTAATCTTTTTTTTTTTTTTTGAAGGAACAACTGCTTTCACTAGGAAATACAAAGACATATAAGAAAACAAGCCCACAAAAAAATTTCACTAGAGAAAGGAGGTCCAACTAAAAACAATGTAGCCTAGAGAATAATTACAAAAACTCTTCGCAAACGAAACCTAAAGAAAAACATGAAATCTCACCAAGGACCAAATTTTAATGGGATCCTACTCAACAGCTCTAAACACTATGTTGTTCTTCTCCCCACCAGCATCTCTTATTTCTTTTGGTTTGGACTAACCCAAGGCCTCTTCTCCTTTCGGCATAAGGACATCCCTCTGTTATTCTTCTCTGGGTCTCTAACCCTTTTTATCATCTTGGCAAAATGCTTCCATAAGTTCAGATAGAAACTCAATGATTTTTATGAGTTCTAGTGATTTTCGTGAATTTCATTTTATAAAATAATTGATATTTTCATATATTTAAGAGTTTACCATTTCTATACTTGTTTCACTATGGTGGAGAAAAACACGCCTAGCACATATAACTGCAGGGTCTTAAGGAAAAGATTGGACCCAGAAAGTTCAACTTAAAATAATGCTCATGGCTAGAAATAATTAATGCTCAGTCCGTCGAGATACTGATTGCACTAAAAGACTTGCTCTATTTGTTTAAGCAAATCCAATATATCGTAATACTAATTCAATGGAAAATTTTCCTTTCCCTAACCAAAATGAAGTGCAGATCTGAGAGTATAAGCTACTGACCCGGGTCTTCAGGAGTAGGTTTTTCTTGGCCTGGTTGAGCCTCCTGGATAATAATAGTCACTTGAACAATTGACTGGGTTTGATTGTTCACACCATATTCCAAGCAAGCCTCCTTGTTCAAAAGCCAAAGAAAAGCCTTATGATAATCATAATTATTAGTCAGACAGCACAAAATATACTCATTAATCAAATAACTCAACTCTGTGCATTTTCGGGAGTGGAAAATATAATCTAAGAGCACCAATAGAGACATTAATAAAGAAGGAACAAGAAATTTTGAATACTGTGAAATTTTTCATAGAATATGTTACAGTAACTCGAGCAAAACTCATGACAATTCTCTCTCTAATTGTACATACCCAAATTATAAGTAATTCATGTACGAAGGATTACAGAATTAGAACACATTGATCTGAATACTTAAAATGTAAAATAAACCTCAGAAACCAAAAAGGATAAAGTAGAACGTGCTACTTGAAAATCCAACGTCTTTCTCAAGATAACTGATCTAATCATCAACCTCAGCTTTAATCTCCTTTTGCAATTCTTCCTTGTATTCCTCGAAGGTTCCAGGGAAAAACTCCACAGTGCCATTTTCAACAACCCAAATTTCACTTTTTTCTTCATCCTCACAGACATGTGATATGAGTCTGGAATCATGACTAACCAGAACAACTCCACCAGTGAACTCATCCAAGGCATCTGCAAGTGCATCAATACTCTGCATGTCCAAGTGATTCGTCGGTTCATCGAGCAGTAATATGTGTGGTTTTGACATGGAAATTGAGGTAAAAACAACCCTGGCTTTTTGGCCCCCAGATAATTTAGCAATTGGCGTGAGGTGGTTGTGGCTAGGAAGTCCAAACTTCCCCAACTTAGCACGAACAGCCTCCTGCTTACTTAGACCCTCTTGATCAGGATGAAGACGAAGAAGATATTGAACTGGTGTTTCCTCCATTGTCAGAAGGTCTACAAAATGCTGTGAGTACCTCCCAATCCTCAGCTTCTGACTCCTACGAACTTCACCTTCGCTCGGTACCAAATCACCTGCTAGAAGGTTCAGAAGAGTAG

mRNA sequence

ATGAGACACGAACAGCCTCCTGCTTACTTAGACCCTCTTGATCAGGATGAAGACGAAGAAGATATTGAACTGGTGTTTCCTCCATTGTCAGAAGGTCTACAAAATGCTGTGAGTACCTCCCAATCCTCAGCTTCTGACTCCTACGAACTTCACCTTCGCTCGGTACCAAATCACCTGCTAGAAGGTTCAGAAGAGTAG

Coding sequence (CDS)

ATGAGACACGAACAGCCTCCTGCTTACTTAGACCCTCTTGATCAGGATGAAGACGAAGAAGATATTGAACTGGTGTTTCCTCCATTGTCAGAAGGTCTACAAAATGCTGTGAGTACCTCCCAATCCTCAGCTTCTGACTCCTACGAACTTCACCTTCGCTCGGTACCAAATCACCTGCTAGAAGGTTCAGAAGAGTAG

Protein sequence

MRHEQPPAYLDPLDQDEDEEDIELVFPPLSEGLQNAVSTSQSSASDSYELHLRSVPNHLLEGSEE
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..48
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..48

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G017370.1Lsi01G017370.1mRNA