Lsi01G017340 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G017340
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	RmlC-type cupin
Location	chr01: 16096334 .. 16097613 (-)
RNA-Seq Expression	Lsi01G017340
Synteny	Lsi01G017340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGTCGCGAAAAGAATACGAAGAGAGAGAATTTCAGAGCAGGCTCTTGGGCAGTGGTTAGTATGCGGAGCATTGTCAGAGAAGACGACAATGGCGAACCCTAGGAGGAACTCCATTTCATTCTCATCTTCTAGCAATCCTCAAAGCTTGGAGAGTCCATTTCACAGTCAATCCCAAGGCCGAAGCCTTTCGCTCTCGTTAGCCTTGTCATTCTCTCATCTGAAGAACTTTCTGAAGAAGCCTCACGCCTTCCCTTTCCTTCTCTCTGTTTTCCTGTTACTCACATGGATTTCTCTCAGAATCCAGCACTCTTCTTCTCGCTTCTCCTCTCCCGATTCCTCTCGCTTTCAGCAGATTCCTGATTCGTGGAGCAAGGATGACGATCTTAAGGCCAACCTCGTTCGCTTCAAGTCTGGATTTCCTTCCCCGATTGCCAAGGACAACAGAGGCTGGCTACTCGACCCTATTTCCCTTGCGCTTGGTTCTGGCATTCCTGGTACTCCGATCGTCTTCGCTTCTGGTTTTAATCCATCAATGTTCCGTTTAGTTTGCTCTTAATTCGGCTTTTGGGCGTCTACTTAGCCTATTATGACTGCGTTTGTTAATTGCTTTGAGCTTGAAACTGCATGCAATTCTATCCACTGCGACTGGAACCTAAACCCAGTAGTTTAATTGAGCCTATAAGTGCTCCAAAATCAATCAGTGAAGGCCACGTTCATTTCATCGATCATTTCGTTTTTCTTGCAGGTGGAGCAGTGACCTGTGCTTCTGTTCATGTTGGAGAAATTCAACCTGGTGCTATGAGGGGAAACCACAGACATCATACATGTAACGAGACATTTATCCTGTGGGGGGCTAGAACAAAATTCAGGGTAAGCTAAGGACTACGAGATTGGTAGTCATTTGTTTATTTTATATGTTTTATATTATGCATTTTATGGCTGTGGCATAAAGTTGGAAACTCTTTCCTTGAATAAATAATGTTAGGATTCAAATTAAATATGTTTAAGTTAATTAATAGTCTTACCCTGTTGCTAATTTGGATTCTTCGTCTCCTTATGCACCCTATGCAGTTGGAGAACAACAAGGTAGGTGATAAAGGATATGCTGAAGTGATAATTGGTGCGGATGAGGTTGCTATTGCAGCAAGTCCAAGAGGAACGGCCCATGCATTGATAAACATGGATCCCGTACGGACTACATTGTTTATGGGATGTCAAGATGGTAGTATAAACTATAACAGTTCAACTTCAGATTTTAAAGTTTGGAAAGATCTTTAG

mRNA sequence

ATTGTCGCGAAAAGAATACGAAGAGAGAGAATTTCAGAGCAGGCTCTTGGGCAGTGGTTAGTATGCGGAGCATTGTCAGAGAAGACGACAATGGCGAACCCTAGGAGGAACTCCATTTCATTCTCATCTTCTAGCAATCCTCAAAGCTTGGAGAGTCCATTTCACAGTCAATCCCAAGGCCGAAGCCTTTCGCTCTCGTTAGCCTTGTCATTCTCTCATCTGAAGAACTTTCTGAAGAAGCCTCACGCCTTCCCTTTCCTTCTCTCTGTTTTCCTGTTACTCACATGGATTTCTCTCAGAATCCAGCACTCTTCTTCTCGCTTCTCCTCTCCCGATTCCTCTCGCTTTCAGCAGATTCCTGATTCGTGGAGCAAGGATGACGATCTTAAGGCCAACCTCGTTCGCTTCAAGTCTGGATTTCCTTCCCCGATTGCCAAGGACAACAGAGGCTGGCTACTCGACCCTATTTCCCTTGCGCTTGGTTCTGGCATTCCTGGTGGAGCAGTGACCTGTGCTTCTGTTCATGTTGGAGAAATTCAACCTGGTGCTATGAGGGGAAACCACAGACATCATACATGTAACGAGACATTTATCCTGTGGGGGGCTAGAACAAAATTCAGGTTGGAGAACAACAAGGTAGGTGATAAAGGATATGCTGAAGTGATAATTGGTGCGGATGAGGTTGCTATTGCAGCAAGTCCAAGAGGAACGGCCCATGCATTGATAAACATGGATCCCGTACGGACTACATTGTTTATGGGATGTCAAGATGGTAGTATAAACTATAACAGTTCAACTTCAGATTTTAAAGTTTGGAAAGATCTTTAG

Coding sequence (CDS)

ATGGCGAACCCTAGGAGGAACTCCATTTCATTCTCATCTTCTAGCAATCCTCAAAGCTTGGAGAGTCCATTTCACAGTCAATCCCAAGGCCGAAGCCTTTCGCTCTCGTTAGCCTTGTCATTCTCTCATCTGAAGAACTTTCTGAAGAAGCCTCACGCCTTCCCTTTCCTTCTCTCTGTTTTCCTGTTACTCACATGGATTTCTCTCAGAATCCAGCACTCTTCTTCTCGCTTCTCCTCTCCCGATTCCTCTCGCTTTCAGCAGATTCCTGATTCGTGGAGCAAGGATGACGATCTTAAGGCCAACCTCGTTCGCTTCAAGTCTGGATTTCCTTCCCCGATTGCCAAGGACAACAGAGGCTGGCTACTCGACCCTATTTCCCTTGCGCTTGGTTCTGGCATTCCTGGTGGAGCAGTGACCTGTGCTTCTGTTCATGTTGGAGAAATTCAACCTGGTGCTATGAGGGGAAACCACAGACATCATACATGTAACGAGACATTTATCCTGTGGGGGGCTAGAACAAAATTCAGGTTGGAGAACAACAAGGTAGGTGATAAAGGATATGCTGAAGTGATAATTGGTGCGGATGAGGTTGCTATTGCAGCAAGTCCAAGAGGAACGGCCCATGCATTGATAAACATGGATCCCGTACGGACTACATTGTTTATGGGATGTCAAGATGGTAGTATAAACTATAACAGTTCAACTTCAGATTTTAAAGTTTGGAAAGATCTTTAG

Protein sequence

MANPRRNSISFSSSSNPQSLESPFHSQSQGRSLSLSLALSFSHLKNFLKKPHAFPFLLSVFLLLTWISLRIQHSSSRFSSPDSSRFQQIPDSWSKDDDLKANLVRFKSGFPSPIAKDNRGWLLDPISLALGSGIPGGAVTCASVHVGEIQPGAMRGNHRHHTCNETFILWGARTKFRLENNKVGDKGYAEVIIGADEVAIAASPRGTAHALINMDPVRTTLFMGCQDGSINYNSSTSDFKVWKDL

Homology

[Close]

BLAST of Lsi01G017340 vs. ExPASy TrEMBL
Match: A0A1S3C1M8 (uncharacterized protein LOC103495876 OS=Cucumis melo OX=3656 GN=LOC103495876 PE=4 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 2.5e-125
Identity = 226/245 (92.24%), Postives = 236/245 (96.33%), Query Frame = 0


Query: 1   MANPRRNSISFSSSSNPQSLESPFHSQSQGRSLSLSLALSFSHLKNFLKKPHAFPFLLSV 60
           MANPRRNSISFSSS+NPQSLESPFHSQSQ RSLSLSLALSFSHLKNFLKKPHAFPFLLS+
Sbjct: 1   MANPRRNSISFSSSTNPQSLESPFHSQSQARSLSLSLALSFSHLKNFLKKPHAFPFLLSI 60

Query: 61  FLLLTWISLRIQHSSSRFSSPDSSRFQQIPDSWSKDDDLKANLVRFKSGFPSPIAKDNRG 120
           FLLLTW+SLRIQHSSS+F    SSR+ Q PDSWS+DDDLKANLVRFKSGFPSPIAKDNRG
Sbjct: 61  FLLLTWVSLRIQHSSSQF----SSRYHQAPDSWSRDDDLKANLVRFKSGFPSPIAKDNRG 120

Query: 121 WLLDPISLALGSGIPGGAVTCASVHVGEIQPGAMRGNHRHHTCNETFILWGARTKFRLEN 180
           WLLDPISLALGSGI GGAVTCASVH+GEIQPGAMRGNHRHHTCNETF+LWGARTKFRLEN
Sbjct: 121 WLLDPISLALGSGITGGAVTCASVHIGEIQPGAMRGNHRHHTCNETFVLWGARTKFRLEN 180

Query: 181 NKVGDKGYAEVIIGADEVAIAASPRGTAHALINMDPVRTTLFMGCQDGSINYNSSTSDFK 240
           N VGDKGYAEVIIGADEVAIAASPRGTAHALIN+DPVRTTLF+GCQDGSINYNSSTSDFK
Sbjct: 181 NNVGDKGYAEVIIGADEVAIAASPRGTAHALINIDPVRTTLFLGCQDGSINYNSSTSDFK 240

Query: 241 VWKDL 246
           VWKDL
Sbjct: 241 VWKDL 241

[Close]

BLAST of Lsi01G017340 vs. ExPASy TrEMBL
Match: A0A0A0KYQ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G416440 PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 8.0e-124
Identity = 226/245 (92.24%), Postives = 233/245 (95.10%), Query Frame = 0


Query: 1   MANPRRNSISFSSSSNPQSLESPFHSQSQGRSLSLSLALSFSHLKNFLKKPHAFPFLLSV 60
           MANPRRNSISFSSS+NPQSLESPFHSQSQ RSLSLSLALSFSHLKNFLKKPHAFPFLLSV
Sbjct: 1   MANPRRNSISFSSSTNPQSLESPFHSQSQARSLSLSLALSFSHLKNFLKKPHAFPFLLSV 60

Query: 61  FLLLTWISLRIQHSSSRFSSPDSSRFQQIPDSWSKDDDLKANLVRFKSGFPSPIAKDNRG 120
           FLLLTWI LRIQHSSS+F    SSR+ Q  DSWS+DDDLKANLVRF SGFPSPIAKDNRG
Sbjct: 61  FLLLTWIFLRIQHSSSQF----SSRYHQATDSWSRDDDLKANLVRFNSGFPSPIAKDNRG 120

Query: 121 WLLDPISLALGSGIPGGAVTCASVHVGEIQPGAMRGNHRHHTCNETFILWGARTKFRLEN 180
           WLLDPISLALGSGI GGAVTCASVH+GEIQPGAMRGNHRHHTCNETF+LWGARTKFRLEN
Sbjct: 121 WLLDPISLALGSGITGGAVTCASVHIGEIQPGAMRGNHRHHTCNETFVLWGARTKFRLEN 180

Query: 181 NKVGDKGYAEVIIGADEVAIAASPRGTAHALINMDPVRTTLFMGCQDGSINYNSSTSDFK 240
           N VGDKGYAEVIIGADEVAIAASPRGTAHALINMDPVRTTLF+GCQDGSINYNSSTSDFK
Sbjct: 181 NNVGDKGYAEVIIGADEVAIAASPRGTAHALINMDPVRTTLFLGCQDGSINYNSSTSDFK 240

Query: 241 VWKDL 246
           VWKDL
Sbjct: 241 VWKDL 241

[Close]

BLAST of Lsi01G017340 vs. ExPASy TrEMBL
Match: A0A6J1GEB2 (uncharacterized protein LOC111453402 OS=Cucurbita moschata OX=3662 GN=LOC111453402 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 3.7e-121
Identity = 217/245 (88.57%), Postives = 231/245 (94.29%), Query Frame = 0


Query: 1   MANPRRNSISFSSSSNPQSLESPFHSQSQGRSLSLSLALSFSHLKNFLKKPHAFPFLLSV 60
           MANPRR SIS  SSSNPQSLESPFH QS GR+LSLSL   FS LKNFLKKPHAFPFLLSV
Sbjct: 1   MANPRRTSISLFSSSNPQSLESPFHIQSHGRTLSLSLRFLFSFLKNFLKKPHAFPFLLSV 60

Query: 61  FLLLTWISLRIQHSSSRFSSPDSSRFQQIPDSWSKDDDLKANLVRFKSGFPSPIAKDNRG 120
           FLLLTWISLRIQHSSS+FSSPDSSRF+Q PDSWSKDDDLKANLVRFKSGFPSPI++D RG
Sbjct: 61  FLLLTWISLRIQHSSSQFSSPDSSRFEQNPDSWSKDDDLKANLVRFKSGFPSPISRDKRG 120

Query: 121 WLLDPISLALGSGIPGGAVTCASVHVGEIQPGAMRGNHRHHTCNETFILWGARTKFRLEN 180
           W+LDPISLAL SGIPGGA++CASVH+GEIQPGAMRGNHRHHTCNETF+LWGARTKFRLEN
Sbjct: 121 WILDPISLALDSGIPGGAMSCASVHIGEIQPGAMRGNHRHHTCNETFVLWGARTKFRLEN 180

Query: 181 NKVGDKGYAEVIIGADEVAIAASPRGTAHALINMDPVRTTLFMGCQDGSINYNSSTSDFK 240
           +KVGDKGYAEVII ADEVA+AASPRGTAHALINMDPVRTTLF+GCQDG INYN+STSDFK
Sbjct: 181 SKVGDKGYAEVIISADEVAVAASPRGTAHALINMDPVRTTLFLGCQDGIINYNTSTSDFK 240

Query: 241 VWKDL 246
           VWKDL
Sbjct: 241 VWKDL 245

[Close]

BLAST of Lsi01G017340 vs. ExPASy TrEMBL
Match: A0A6J1HS22 (uncharacterized protein LOC111467267 OS=Cucurbita maxima OX=3661 GN=LOC111467267 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 3.2e-120
Identity = 217/245 (88.57%), Postives = 229/245 (93.47%), Query Frame = 0


Query: 1   MANPRRNSISFSSSSNPQSLESPFHSQSQGRSLSLSLALSFSHLKNFLKKPHAFPFLLSV 60
           MANPRR SIS  SSSNPQSLE+PFH QS GR+LSLSL   FS LKNFLKKPHAFPFLLSV
Sbjct: 1   MANPRRTSISLLSSSNPQSLETPFHIQSHGRTLSLSLRFLFSFLKNFLKKPHAFPFLLSV 60

Query: 61  FLLLTWISLRIQHSSSRFSSPDSSRFQQIPDSWSKDDDLKANLVRFKSGFPSPIAKDNRG 120
           FLLLTWISLRIQHSSS+FSSPDSSRF+Q PDSWSKD DLKANLVRFKSGFPSPI++D RG
Sbjct: 61  FLLLTWISLRIQHSSSQFSSPDSSRFEQNPDSWSKDGDLKANLVRFKSGFPSPISRDKRG 120

Query: 121 WLLDPISLALGSGIPGGAVTCASVHVGEIQPGAMRGNHRHHTCNETFILWGARTKFRLEN 180
           WLLDPISLAL SGIPGGAV+CASVH+GEIQPGAMRGNHRHHTCNETF+LWGA TKFRLEN
Sbjct: 121 WLLDPISLALDSGIPGGAVSCASVHIGEIQPGAMRGNHRHHTCNETFVLWGATTKFRLEN 180

Query: 181 NKVGDKGYAEVIIGADEVAIAASPRGTAHALINMDPVRTTLFMGCQDGSINYNSSTSDFK 240
           +KVGDKGYAEVII ADEVA+AASPRGTAHALINMDPVRTTLF+GCQDG INYNSSTSDFK
Sbjct: 181 SKVGDKGYAEVIISADEVAVAASPRGTAHALINMDPVRTTLFLGCQDGIINYNSSTSDFK 240

Query: 241 VWKDL 246
           VWKDL
Sbjct: 241 VWKDL 245

[Close]

BLAST of Lsi01G017340 vs. ExPASy TrEMBL
Match: A0A6J1DLW5 (uncharacterized protein LOC111021775 OS=Momordica charantia OX=3673 GN=LOC111021775 PE=4 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 4.3e-117
Identity = 213/245 (86.94%), Postives = 226/245 (92.24%), Query Frame = 0


Query: 1   MANPRRNSISFSSSSNPQSLESPFHSQSQGRSLSLSLALSFSHLKNFLKKPHAFPFLLSV 60
           MANPRR SIS SSS+NPQ+LESPFHSQ Q R LSLS A SFS+L NFLKKPHAFPFLLS+
Sbjct: 1   MANPRRTSISLSSSTNPQNLESPFHSQIQSRILSLSFASSFSYLANFLKKPHAFPFLLSI 60

Query: 61  FLLLTWISLRIQHSSSRFSSPDSSRFQQIPDSWSKDDDLKANLVRFKSGFPSPIAKDNRG 120
           FL LTWISLRIQHSS+ FSSPDS RFQQ  +SWSKDDD KANLVRFKSGFPSPIAKDNRG
Sbjct: 61  FLFLTWISLRIQHSST-FSSPDSPRFQQNRESWSKDDDFKANLVRFKSGFPSPIAKDNRG 120

Query: 121 WLLDPISLALGSGIPGGAVTCASVHVGEIQPGAMRGNHRHHTCNETFILWGARTKFRLEN 180
           WLLDP+SLAL SGIPGGAVTCASVH+GEI+PGAMRGNHRHHTCNETF+LWGARTKFRLEN
Sbjct: 121 WLLDPVSLALHSGIPGGAVTCASVHIGEIRPGAMRGNHRHHTCNETFVLWGARTKFRLEN 180

Query: 181 NKVGDKGYAEVIIGADEVAIAASPRGTAHALINMDPVRTTLFMGCQDGSINYNSSTSDFK 240
           +K GDKGYAEVIIGA+EVA+AASPRG AHALINMDPVR TLFMGCQDG INYNSSTSDFK
Sbjct: 181 SKAGDKGYAEVIIGAEEVAVAASPRGRAHALINMDPVRPTLFMGCQDGIINYNSSTSDFK 240

Query: 241 VWKDL 246
           VWKDL
Sbjct: 241 VWKDL 244

[Close]

BLAST of Lsi01G017340 vs. NCBI nr
Match: XP_038882191.1 (uncharacterized protein LOC120073413 [Benincasa hispida])

HSP 1 Score: 485.3 bits (1248), Expect = 3.0e-133
Identity = 238/245 (97.14%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 1   MANPRRNSISFSSSSNPQSLESPFHSQSQGRSLSLSLALSFSHLKNFLKKPHAFPFLLSV 60
           MANPRRNSISFSSSSNPQSLESPFHSQSQGRSLSLSLALSFSHLKNFLKKPHAFPFLLSV
Sbjct: 1   MANPRRNSISFSSSSNPQSLESPFHSQSQGRSLSLSLALSFSHLKNFLKKPHAFPFLLSV 60

Query: 61  FLLLTWISLRIQHSSSRFSSPDSSRFQQIPDSWSKDDDLKANLVRFKSGFPSPIAKDNRG 120
           FLLLTWISLRIQHSSSRFSSP+SSRFQQIPDSWSKDDDLKANLVRFKSGFPSPIAKDNRG
Sbjct: 61  FLLLTWISLRIQHSSSRFSSPNSSRFQQIPDSWSKDDDLKANLVRFKSGFPSPIAKDNRG 120

Query: 121 WLLDPISLALGSGIPGGAVTCASVHVGEIQPGAMRGNHRHHTCNETFILWGARTKFRLEN 180
           WLLDPISLALGSGIPGGAVTCAS+H+GEIQPGAMRGNHRHHTCNETF+LWGARTKFRLEN
Sbjct: 121 WLLDPISLALGSGIPGGAVTCASIHIGEIQPGAMRGNHRHHTCNETFVLWGARTKFRLEN 180

Query: 181 NKVGDKGYAEVIIGADEVAIAASPRGTAHALINMDPVRTTLFMGCQDGSINYNSSTSDFK 240
           +KVGDKGYAEVIIGADEVA+AASPRGTAHALINMDPVRTTLF+GCQDGSINYNSSTSDFK
Sbjct: 181 SKVGDKGYAEVIIGADEVAVAASPRGTAHALINMDPVRTTLFLGCQDGSINYNSSTSDFK 240

Query: 241 VWKDL 246
           VWKDL
Sbjct: 241 VWKDL 245

[Close]

BLAST of Lsi01G017340 vs. NCBI nr
Match: XP_008455777.1 (PREDICTED: uncharacterized protein LOC103495876 [Cucumis melo])

HSP 1 Score: 458.0 bits (1177), Expect = 5.2e-125
Identity = 226/245 (92.24%), Postives = 236/245 (96.33%), Query Frame = 0


Query: 1   MANPRRNSISFSSSSNPQSLESPFHSQSQGRSLSLSLALSFSHLKNFLKKPHAFPFLLSV 60
           MANPRRNSISFSSS+NPQSLESPFHSQSQ RSLSLSLALSFSHLKNFLKKPHAFPFLLS+
Sbjct: 1   MANPRRNSISFSSSTNPQSLESPFHSQSQARSLSLSLALSFSHLKNFLKKPHAFPFLLSI 60

Query: 61  FLLLTWISLRIQHSSSRFSSPDSSRFQQIPDSWSKDDDLKANLVRFKSGFPSPIAKDNRG 120
           FLLLTW+SLRIQHSSS+F    SSR+ Q PDSWS+DDDLKANLVRFKSGFPSPIAKDNRG
Sbjct: 61  FLLLTWVSLRIQHSSSQF----SSRYHQAPDSWSRDDDLKANLVRFKSGFPSPIAKDNRG 120

Query: 121 WLLDPISLALGSGIPGGAVTCASVHVGEIQPGAMRGNHRHHTCNETFILWGARTKFRLEN 180
           WLLDPISLALGSGI GGAVTCASVH+GEIQPGAMRGNHRHHTCNETF+LWGARTKFRLEN
Sbjct: 121 WLLDPISLALGSGITGGAVTCASVHIGEIQPGAMRGNHRHHTCNETFVLWGARTKFRLEN 180

Query: 181 NKVGDKGYAEVIIGADEVAIAASPRGTAHALINMDPVRTTLFMGCQDGSINYNSSTSDFK 240
           N VGDKGYAEVIIGADEVAIAASPRGTAHALIN+DPVRTTLF+GCQDGSINYNSSTSDFK
Sbjct: 181 NNVGDKGYAEVIIGADEVAIAASPRGTAHALINIDPVRTTLFLGCQDGSINYNSSTSDFK 240

Query: 241 VWKDL 246
           VWKDL
Sbjct: 241 VWKDL 241

[Close]

BLAST of Lsi01G017340 vs. NCBI nr
Match: XP_004144302.1 (uncharacterized protein LOC101212156 [Cucumis sativus] >KGN54648.1 hypothetical protein Csa_012299 [Cucumis sativus])

HSP 1 Score: 453.0 bits (1164), Expect = 1.7e-123
Identity = 226/245 (92.24%), Postives = 233/245 (95.10%), Query Frame = 0


Query: 1   MANPRRNSISFSSSSNPQSLESPFHSQSQGRSLSLSLALSFSHLKNFLKKPHAFPFLLSV 60
           MANPRRNSISFSSS+NPQSLESPFHSQSQ RSLSLSLALSFSHLKNFLKKPHAFPFLLSV
Sbjct: 1   MANPRRNSISFSSSTNPQSLESPFHSQSQARSLSLSLALSFSHLKNFLKKPHAFPFLLSV 60

Query: 61  FLLLTWISLRIQHSSSRFSSPDSSRFQQIPDSWSKDDDLKANLVRFKSGFPSPIAKDNRG 120
           FLLLTWI LRIQHSSS+F    SSR+ Q  DSWS+DDDLKANLVRF SGFPSPIAKDNRG
Sbjct: 61  FLLLTWIFLRIQHSSSQF----SSRYHQATDSWSRDDDLKANLVRFNSGFPSPIAKDNRG 120

Query: 121 WLLDPISLALGSGIPGGAVTCASVHVGEIQPGAMRGNHRHHTCNETFILWGARTKFRLEN 180
           WLLDPISLALGSGI GGAVTCASVH+GEIQPGAMRGNHRHHTCNETF+LWGARTKFRLEN
Sbjct: 121 WLLDPISLALGSGITGGAVTCASVHIGEIQPGAMRGNHRHHTCNETFVLWGARTKFRLEN 180

Query: 181 NKVGDKGYAEVIIGADEVAIAASPRGTAHALINMDPVRTTLFMGCQDGSINYNSSTSDFK 240
           N VGDKGYAEVIIGADEVAIAASPRGTAHALINMDPVRTTLF+GCQDGSINYNSSTSDFK
Sbjct: 181 NNVGDKGYAEVIIGADEVAIAASPRGTAHALINMDPVRTTLFLGCQDGSINYNSSTSDFK 240

Query: 241 VWKDL 246
           VWKDL
Sbjct: 241 VWKDL 241

[Close]

BLAST of Lsi01G017340 vs. NCBI nr
Match: XP_023543488.1 (uncharacterized protein LOC111803357 [Cucurbita pepo subsp. pepo] >XP_023543489.1 uncharacterized protein LOC111803357 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 447.2 bits (1149), Expect = 9.1e-122
Identity = 220/245 (89.80%), Postives = 231/245 (94.29%), Query Frame = 0


Query: 1   MANPRRNSISFSSSSNPQSLESPFHSQSQGRSLSLSLALSFSHLKNFLKKPHAFPFLLSV 60
           MANPRR SIS  SSSNPQSLESPFH QS GR+LSLSL   FS LKNFLKKPHAFPFLLSV
Sbjct: 1   MANPRRTSISLLSSSNPQSLESPFHVQSHGRTLSLSLRFLFSFLKNFLKKPHAFPFLLSV 60

Query: 61  FLLLTWISLRIQHSSSRFSSPDSSRFQQIPDSWSKDDDLKANLVRFKSGFPSPIAKDNRG 120
           FLLLTWISLRIQHSSS+FSSPDSSRF+Q PDSWSKDDDLKANLVRFKSGFPSPI++D RG
Sbjct: 61  FLLLTWISLRIQHSSSQFSSPDSSRFEQNPDSWSKDDDLKANLVRFKSGFPSPISRDKRG 120

Query: 121 WLLDPISLALGSGIPGGAVTCASVHVGEIQPGAMRGNHRHHTCNETFILWGARTKFRLEN 180
           WLLDPISLAL SGIPGGAV+CASVH+GEIQPGAMRGNHRHHTCNETF+LWGARTKFRLEN
Sbjct: 121 WLLDPISLALDSGIPGGAVSCASVHIGEIQPGAMRGNHRHHTCNETFVLWGARTKFRLEN 180

Query: 181 NKVGDKGYAEVIIGADEVAIAASPRGTAHALINMDPVRTTLFMGCQDGSINYNSSTSDFK 240
           +KVGDKGYAEVII ADEVA+AASPRGTAHALINMDPVRTTLF+GCQDG INYNSSTSDFK
Sbjct: 181 SKVGDKGYAEVIISADEVAVAASPRGTAHALINMDPVRTTLFLGCQDGIINYNSSTSDFK 240

Query: 241 VWKDL 246
           VWKDL
Sbjct: 241 VWKDL 245

[Close]

BLAST of Lsi01G017340 vs. NCBI nr
Match: KAG7033626.1 (hypothetical protein SDJN02_03350 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 446.4 bits (1147), Expect = 1.6e-121
Identity = 219/245 (89.39%), Postives = 231/245 (94.29%), Query Frame = 0


Query: 1   MANPRRNSISFSSSSNPQSLESPFHSQSQGRSLSLSLALSFSHLKNFLKKPHAFPFLLSV 60
           MANPRR SIS  SSSNPQSLESPFH QS GR+LSLSL   FS LKNFLKKPHAFPFLLSV
Sbjct: 1   MANPRRTSISLFSSSNPQSLESPFHIQSHGRTLSLSLRFLFSFLKNFLKKPHAFPFLLSV 60

Query: 61  FLLLTWISLRIQHSSSRFSSPDSSRFQQIPDSWSKDDDLKANLVRFKSGFPSPIAKDNRG 120
           FLLLTWISLRIQHSSS+FSSPDSSRF+Q PDSWSKDDDLKANLVRFKSGFPSPI++D RG
Sbjct: 61  FLLLTWISLRIQHSSSQFSSPDSSRFEQNPDSWSKDDDLKANLVRFKSGFPSPISRDKRG 120

Query: 121 WLLDPISLALGSGIPGGAVTCASVHVGEIQPGAMRGNHRHHTCNETFILWGARTKFRLEN 180
           W+LDPISLAL SGIPGGAV+CASVH+GEIQPGAMRGNHRHHTCNETF+LWGARTKFRLEN
Sbjct: 121 WILDPISLALDSGIPGGAVSCASVHIGEIQPGAMRGNHRHHTCNETFVLWGARTKFRLEN 180

Query: 181 NKVGDKGYAEVIIGADEVAIAASPRGTAHALINMDPVRTTLFMGCQDGSINYNSSTSDFK 240
           +KVGDKGYAEVII ADEVA+AASPRGTAHALINMDPVRTTLF+GCQDG INYNSSTSDFK
Sbjct: 181 SKVGDKGYAEVIISADEVAVAASPRGTAHALINMDPVRTTLFLGCQDGIINYNSSTSDFK 240

Query: 241 VWKDL 246
           VWKDL
Sbjct: 241 VWKDL 245

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BLAST of Lsi01G017340 vs. TAIR 10
Match: AT3G56820.1 (unknown protein; Has 34 Blast hits to 34 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 265.0 bits (676), Expect = 6.0e-71
Identity = 136/208 (65.38%), Postives = 157/208 (75.48%), Query Frame = 0


Query: 42  SHLKNFLKKPHAFPFLLSVFLLLTWISLRIQHSS----SRFSSPDSSRFQQIPDSWSKDD 101
           S L N LKKP A P LLS+FLLLTWISLR+QHSS    S  SS   S     PD    DD
Sbjct: 15  SPLINLLKKPQAIPLLLSLFLLLTWISLRLQHSSQSHVSSSSSHPKSTVNSHPDLKVYDD 74

Query: 102 DLKANLVRFKSGFPSPIAKDNRGWLLDPISLALGSGIPGGAVTCASVHVGEIQPGAMRGN 161
           D KANLVRF     SP  KD+RGWLLDP+ LA  S + GGA +C S+HVGEI+PG +RGN
Sbjct: 75  DDKANLVRFGLASLSPARKDDRGWLLDPVILARDSELKGGAASCVSIHVGEIRPGGLRGN 134

Query: 162 HRHHTCNETFILWGARTKFRLENNKVGDKGYAEVIIGADEVAIAASPRGTAHALINMDPV 221
           HRHHTCNETF++WGA+TKFRLEN++V DKGYAEV+IG DEVA+A S  GTAHAL+N+DPV
Sbjct: 135 HRHHTCNETFVIWGAKTKFRLENHEV-DKGYAEVLIGEDEVAVAVSQSGTAHALVNVDPV 194

Query: 222 RTTLFMGCQDGSINYNSSTSDFKVWKDL 246
           R+T F+GCQD   N NSSTSD+KVW DL
Sbjct: 195 RSTFFIGCQDHMQN-NSSTSDYKVWNDL 220

The following BLAST results are available for this feature:

BLAST of Lsi01G017340 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi01G017340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C1M8	2.5e-125	92.24	uncharacterized protein LOC103495876 OS=Cucumis melo OX=3656 GN=LOC103495876 PE=...	[more]
A0A0A0KYQ7	8.0e-124	92.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G416440 PE=4 SV=1	[more]
A0A6J1GEB2	3.7e-121	88.57	uncharacterized protein LOC111453402 OS=Cucurbita moschata OX=3662 GN=LOC1114534...	[more]
A0A6J1HS22	3.2e-120	88.57	uncharacterized protein LOC111467267 OS=Cucurbita maxima OX=3661 GN=LOC111467267...	[more]
A0A6J1DLW5	4.3e-117	86.94	uncharacterized protein LOC111021775 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]

BLAST of Lsi01G017340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882191.1	3.0e-133	97.14	uncharacterized protein LOC120073413 [Benincasa hispida]	[more]
XP_008455777.1	5.2e-125	92.24	PREDICTED: uncharacterized protein LOC103495876 [Cucumis melo]	[more]
XP_004144302.1	1.7e-123	92.24	uncharacterized protein LOC101212156 [Cucumis sativus] >KGN54648.1 hypothetical ...	[more]
XP_023543488.1	9.1e-122	89.80	uncharacterized protein LOC111803357 [Cucurbita pepo subsp. pepo] >XP_023543489....	[more]
KAG7033626.1	1.6e-121	89.39	hypothetical protein SDJN02_03350 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Lsi01G017340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56820.1	6.0e-71	65.38	unknown protein; Has 34 Blast hits to 34 proteins in 13 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 113..238 e-value: 1.1E-12 score: 49.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR37742	OS01G0810200 PROTEIN	coord: 1..245
IPR011051	RmlC-like cupin domain superfamily	SUPERFAMILY	51182	RmlC-like cupins	coord: 115..225

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G017340.1	Lsi01G017340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane