Lsi01G017280 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G017280
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	ubiquitin-conjugating enzyme E2 22-like
Location	chr01: 16044774 .. 16049272 (+)
RNA-Seq Expression	Lsi01G017280
Synteny	Lsi01G017280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTTTGTTGTTCTTCTTACTTTAGTTTGAATGTGCAAATGGGGATGGGGGGATTTTGGGAGAATTAGGGTTTTTCTTGGTTCTTATTGCCGTCGATTGGAACATTTGTTTCTTTGAGGGTCTGTTCATCCGATTCTAAAGTTTAAGAATTTAAAGTTAGTCTTGGCAATTACTGCACTTCCTTTTCTGTATTTCTATTGATTAAAAGCCGAGGCATCTGATTCGTGTATCACTTCCATGAATTGCGTCTCCGAGACCTTGCTTTATACGAAGAAAAAGTTCTGACAATGTTTGCCCTTATGAAACTTCTCTTTTAGGGTTTTAGCAGCCCGAAGTGTATTTTGAAATTAAATGCTCTTTGATGATGTTTGATTTTGGTGCTCTATTGGTAACTGCTTCGAAAATTATGTACAAATCAGTGGTCGATTGATATTGACTTCAAAGTTTGTTGGCTGTGTATGTTTGTTAATACAAGTAACGATTTTTCTTTTTTGGTCTTCATTCTGGTGATGCAACCTTTGTTGAATTATGCGTAGCATCTAGATCATTTAGAAACTTAAAGACCTGGAAATGTGGAAGCTATTAATAATTTGGCTTTTTGATTTTAGAGTCTTGAAGTTGAAATCAACCGTTATTCGTATAATTTCAGGCATCTATGCTGCTCAATGTGTGTGGGTTCATGAGAAAGTGGTAATGTCTAGGATTTAATCCTTAACTATGGATGTCCATCTTAGTTGTAATCTCTCCTCTCGTCTACTGAAATGGTTACAACCTATAACCTGCCGTTATGCAATGAGTGGCAACACACACTTTGGTATGTGTGGCAGATCTACTACCAACTTACTGACTATTGTTGTTTTATGTTTCTGCTTGGGATGGGTTAGAATGTCTTTGTACAAAGGTGGTATAATGTCTTAAATTTGGGTAACCTAATATTAATCTGGTCATGTTGCCCGGTGGATCCCCTTTGAATTTGTTCAGTCAATTCTTTGGTGTTCTTGATCTGGTGCATCCTTAAAGCATAGGTGCCCTAGAGAAGATTCTGGTCACAAGTCATGTACATTTCTCTTGAAACTGGGTAGAAGGTAGGAGCTTCACTAGAGCTACAATGAGCATTCTATTTCTAATGATTTTCTTGTGTCAACTCTGGCACCTACTTAATTTATTCTTGGTTGCTGTACTGCTCCTTTAAGTTTATTAAAGGTTTCAATGTTTCATGATCCTAGAGATATTTATTGTTCTATTACGAACCAACGTGAATTTAGTACAGATGCCCTATTCTTATGTTCTGAATGTATCTCAACTTACGTCAACTTATTCCATGTGCAGGTGTTTCTTTGACTCTGGATTGCTTACACTCAGGAAAGTTGAAGTTTTTCAGCTCTGTTTTTGTTGATTGTTGAAAACAGCTATTCAATTTAGCTGCTGCGTAGAAGTGCTTTGTTTTCCCCCCATTGGATATGGTAATTCTTGGCCTATTGCACATTATATACTTTGACGACCCCCCCACGCTTGTGTGCAGTTGGATGTGGTTATGCTAATAAGTTGGTCAATTGAGTTTGAAGGTGTACTTGTGTTTTGTGAACAATTGTTAGTTAGATTGCCTGAGTATGGAAGTCTGTTGGGGAAGGAGAGAATAAGGAGGATACAGGCGGGAGGGCAAAGGACTCAGGCTTGTAGTTGAGAGAGACCTGCCTCCACTGAAAAAGATTTAGAACTATGTATTTTACTTGTTGAATGCATTTCATTCCCTCTATCTTTGGCTTCATGGGGGACTAGGAGTAAGAGAAACAATTAGGAAGAATGTATTTTACGTCCTTATCCCCTAGTTTGCTTACTCGATTTAATGAATTGTTTTGATGTAGAATGTGTTTAATTAAGAAAGATACAAACAGCCAATGATGCTTTCATGCTCAAATGATTTCATGAAAAACAGTTTCTCATTCCATCTACTGCTATACCCCATTAATGGTGCATTCCTTTTAATCTGTTTCAGGCCACTAATGAAAATCTTCCACCAAATGTTATAAAGCAACTTGCAAAGGAGTTGAAGAGCCTAGATGAATCCCCTCCTGAAGGCATAAAAGTAGGTGTTAACGATGATGACTTCTCAACAATATTTGCTGATATTGAAGGCCCAGGCATGTCATTTATCACTGTTATAACTGAAGTTTATCTCTTTGACATGGAGTTCACTTTTCTTACTGAATTGTGATTGTTTCGCTTGCAGTGGGGACTCCCTATGAGAATGGTCTCTTCCGCATGAAGTTGATATTGTCTCATGATTTCCCATGTTCTCCTCCCAAAGGTTTGCTCTGATCATAATGATTTGGTATAATTTGTGACATTAACGACTTTGGCCTATAGCTGAGTTCATCTTGTGGACCATATTTATCTGAGGATCTAATCTGTATGATTAGTTTATAAATTGAATTTCTGCTTTCCTCTGAAAAAATCCTTCTCTACTTCTCCGTATCTTTTATTCTTTACCCTTAGATCCTATTATTCCTCAACTTTTCTTAATTTCCTTAAAGGTTTCTTCCTTACAAAGATCTTTCATCCGAACATTGCAACCAATGGTGAGATTTGTGTCAACACTTTGAAGAAGGATTGGAATCCAAGCCTCGGATTGCGACATGTCCTAATTGTAATTCCTCTTTCAAATTTTTGGCTGTTATCATTTTTCTTGCCCGATATCCTCATTGACTGAAGAGAACTGTTCTACAAATGCTTTTAGTATTTTGATTTCAGTTTAAGATGTTTAGTTTCAGAATCTCTGTATGATATAGGTGTTATGTGGATTGTGGAACAGGTTGTTAGGTGTCTACTGATTGAACCATTTCCAGAATCAGCTTTGAATGAACAAGCTGGCAAGATGCTGCTTGAGAATTATGATGAGTATGCCAGACATGCCAGGTGAGTCCAGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNCCCCCCCCCCCCCCCCCCCCCCCCCCAAATTATCTGTTCTTCGATAAAAGTTGATATGAAATGCTGGAATGGTTTTTGTTTATTCAGATAGACCTCAGTTGATTTTATTGGTGCACCCATGTGATGTTGGACCCAATAATCACTATTCAAACTATGAGTGGATTTGGTCAACTTTCGAAACTGCTAAAAGTCCTTTTGAAGTATTCACAACGTCGGATCGTACGACTAGAACATTATGTGAAAATTTTAGAAACTCTAAAAAACATGCAAGATACACTTAAAAAAAGGCTTCTGTTTGTAACAACTTTGTTTTTTCGCTTTCTACTTTTGAAATTGATTTCACCCATCTTCTTAATATGGTTTTCACTTAGAACACTAAGCTTAACTTATTTTTAAAAACCAAAAACTAAGGCCCCGTTTGGTCATTTCATTGTTGGTTTTTGGTTTTTGAAAATTAAGCCTATTTCCTCTCACTTTCTTATGTTTTGCATCTTTCTTAAGTACAAGAGTTGCATTCTTAGCCAAATTCCAAAAACAAAAACAAGTTTTAAAAATTTTTTTTTTTTTTTTTTTCAAAATTTGACTTGGTTTTTGAAAACATGGGTAAAAAGTAGATAAGGAAGCAAGAAATTTAGAGGTGAGAGGTGATCATGGGCTTAATTTTTAAAACAAAAAACAAAAAGCTAAATGGTTATTAAATGGGCCTAAATGGTTATCAAACGAGATCTTAATTAATGAAGTACCATTATTTTCAAAGCCCATGTTTGCTTTTTCACATCCAGTGCTTTGTTGTTCTATATTTGTTATGAAGAATTTAACTAGTAAATTGTAACTTCATGATTAAAAGATAATAATGATGGTAAGTAGCTAACTTTCCTCTTGATTTGCCAGGCTCTATACGGGAATCCACGCAAAGCCAAAGCCGAAGTTCAAGACCGGAGCCATATCCGAGTCCACAACTGCCCTCAATGTCGACCCGACAAATGCGTCGGCACTTAATACAGATCTAAAAAACACATCTGCTACTGCTTTGCCTTTGGCATGTCCAACTCCCCATTCTAACACCACAGTCAGAGGTGGGCAGGAGCAACAGCAGCCAAACGTCGTTGCAGCACCAGCTTCGGAATCAGGAGTCGGTGGCTCCGGGGTGGCTGCAGCACCAGCAGCAGCAGCAGCAGTCAAGAAGGAAACTGGACCCTTAAAAATGCAGGGTGACAAGAAAAAGATAGATGCAAGAAAGAAAAGCTTGAAGAGATTGTGATGTTTTTATTAATGGCAGCTTTTTTTAAGGTTAGCTCTCTTGTTCAATAAAATGGTGGGCGCTTAGAAGAAAAGAATTATGAACTGAGAGTTATAAAAGAAAGTGTTGTGCAACCAACCAACTTGTAAGGAACAAACTTTCATTGGATGAATCACTTATGGAATTGACTTCTTCCTTCAACTTTTCCTTTTCCTTTTTTAAATATTTCCATTAAAA

mRNA sequence

ATGCGTTTAGTCTTGAAGTTGAAATCAACCGTTATTCGTATAATTTCAGGCATCTATGCTGCTCAATGTGTGTGGGTTCATGAGAAAGTGGCCACTAATGAAAATCTTCCACCAAATGTTATAAAGCAACTTGCAAAGGAGTTGAAGAGCCTAGATGAATCCCCTCCTGAAGGCATAAAAGTAGGTGTTAACGATGATGACTTCTCAACAATATTTGCTGATATTGAAGGCCCAGGCATTTTAAGATGTTTAGTTTCAGAATCTCTGTATGATATAGGTGTTATGTGGATTGTGGAACAGGTTGTTAGGTGTCTACTGATTGAACCATTTCCAGAATCAGCTTTGAATGAACAAGCTGGCAAGATGCTGCTTGAGAATTATGATGAGTATGCCAGACATGCCAGGCTCTATACGGGAATCCACGCAAAGCCAAAGCCGAAGTTCAAGACCGGAGCCATATCCGAGTCCACAACTGCCCTCAATGTCGACCCGACAAATGCGTCGGCACTTAATACAGATCTAAAAAACACATCTGCTACTGCTTTGCCTTTGGCATGTCCAACTCCCCATTCTAACACCACAGTCAGAGGTGGGCAGGAGCAACAGCAGCCAAACGTCGTTGCAGCACCAGCTTCGGAATCAGGAGTCGGTGGCTCCGGGGTGGCTGCAGCACCAGCAGCAGCAGCAGCAGTCAAGAAGGAAACTGGACCCTTAAAAATGCAGGGTGACAAGAAAAAGATAGATGCAAGAAAGAAAAGCTTGAAGAGATTGTGATGTTTTTATTAATGGCAGCTTTTTTTAAGGTTAGCTCTCTTGTTCAATAAAATGGTGGGCGCTTAGAAGAAAAGAATTATGAACTGAGAGTTATAAAAGAAAGTGTTGTGCAACCAACCAACTTGTAAGGAACAAACTTTCATTGGATGAATCACTTATGGAATTGACTTCTTCCTTCAACTTTTCCTTTTCCTTTTTTAAATATTTCCATTAAAA

Coding sequence (CDS)

ATGCGTTTAGTCTTGAAGTTGAAATCAACCGTTATTCGTATAATTTCAGGCATCTATGCTGCTCAATGTGTGTGGGTTCATGAGAAAGTGGCCACTAATGAAAATCTTCCACCAAATGTTATAAAGCAACTTGCAAAGGAGTTGAAGAGCCTAGATGAATCCCCTCCTGAAGGCATAAAAGTAGGTGTTAACGATGATGACTTCTCAACAATATTTGCTGATATTGAAGGCCCAGGCATTTTAAGATGTTTAGTTTCAGAATCTCTGTATGATATAGGTGTTATGTGGATTGTGGAACAGGTTGTTAGGTGTCTACTGATTGAACCATTTCCAGAATCAGCTTTGAATGAACAAGCTGGCAAGATGCTGCTTGAGAATTATGATGAGTATGCCAGACATGCCAGGCTCTATACGGGAATCCACGCAAAGCCAAAGCCGAAGTTCAAGACCGGAGCCATATCCGAGTCCACAACTGCCCTCAATGTCGACCCGACAAATGCGTCGGCACTTAATACAGATCTAAAAAACACATCTGCTACTGCTTTGCCTTTGGCATGTCCAACTCCCCATTCTAACACCACAGTCAGAGGTGGGCAGGAGCAACAGCAGCCAAACGTCGTTGCAGCACCAGCTTCGGAATCAGGAGTCGGTGGCTCCGGGGTGGCTGCAGCACCAGCAGCAGCAGCAGCAGTCAAGAAGGAAACTGGACCCTTAAAAATGCAGGGTGACAAGAAAAAGATAGATGCAAGAAAGAAAAGCTTGAAGAGATTGTGA

Protein sequence

MRLVLKLKSTVIRIISGIYAAQCVWVHEKVATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPGILRCLVSESLYDIGVMWIVEQVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTGAISESTTALNVDPTNASALNTDLKNTSATALPLACPTPHSNTTVRGGQEQQQPNVVAAPASESGVGGSGVAAAPAAAAAVKKETGPLKMQGDKKKIDARKKSLKRL

Homology

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BLAST of Lsi01G017280 vs. ExPASy Swiss-Prot
Match: Q9FF66 (Ubiquitin-conjugating enzyme E2 22 OS=Arabidopsis thaliana OX=3702 GN=UBC22 PE=1 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.8e-54
Identity = 143/270 (52.96%), Postives = 161/270 (59.63%), Query Frame = 0


Query: 30  VATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGP-------GILR 89
           +A+NENLPPNVIKQLAKELKSLDESPP+GIKV VND+DFS I ADIEGP       G+ R
Sbjct: 1   MASNENLPPNVIKQLAKELKSLDESPPDGIKVVVNDEDFSQICADIEGPVGTPYENGLFR 60

Query: 90  CLVSES--------------------LYDIGVMWI---------------VEQVVRCLLI 149
             ++ S                    +   G + +               V  VVRCLLI
Sbjct: 61  MKLALSHDFPHSPPKGYFMTKIFHPNVASNGEICVNTLKKDWNPSLGLRHVLSVVRCLLI 120

Query: 150 EPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTGAISESTTALNVDPTNA 209
           EPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTGAISESTTALNV  TN 
Sbjct: 121 EPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTGAISESTTALNVGQTNN 180

Query: 210 SALNTDLKNTSATALPLACPTPHSNTTVRGGQEQQQPNVVAAPASESGVGGSGVAAAPAA 258
                     +ATA+P +  T     T     +Q   NVV A            A+A   
Sbjct: 181 ETPG------AATAIP-SSMTDIKRVTTSAQDQQHVANVVVA------------ASASVV 240

[Close]

BLAST of Lsi01G017280 vs. ExPASy Swiss-Prot
Match: C3Z724 (Ubiquitin-conjugating enzyme E2 S OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_259979 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.1e-18
Identity = 58/157 (36.94%), Postives = 77/157 (49.04%), Query Frame = 0


Query: 34  ENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPG-------------- 93
           ENL P +I+Q+AKE+  L   PPEG+KV  N+ D + + A IEGPG              
Sbjct: 8   ENLSPQIIRQVAKEVLDLANHPPEGVKVFPNEQDITDVQATIEGPGGTPYEGGQFKIKLS 67

Query: 94  -----------------------------ILRCLVSESLYDIGVMWIVEQVVRCLLIEPF 148
                                         +  L  +   D+G+  I+   ++CLLI P 
Sbjct: 68  LGKDFPQTPPKGFFLTKIFHPNVAKNGEICVNTLKKDWKADLGLKHIL-LTIKCLLIYPN 127

[Close]

BLAST of Lsi01G017280 vs. ExPASy Swiss-Prot
Match: Q9VX25 (Ubiquitin-conjugating enzyme E2 S OS=Drosophila melanogaster OX=7227 GN=CG8188 PE=1 SV=2)

HSP 1 Score: 94.4 bits (233), Expect = 2.1e-18
Identity = 62/166 (37.35%), Postives = 87/166 (52.41%), Query Frame = 0


Query: 34  ENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGP-------GILRC--- 93
           ENL P  I+Q+ +EL+ ++ +PPEGIKV +N+ D + I A I+GP       GI R    
Sbjct: 9   ENLSPQTIRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLT 68

Query: 94  ------LVSESLY---------------------------DIGVMWIVEQVVRCLLIEPF 153
                 L     Y                           D+G+  I+   ++CLLI P 
Sbjct: 69  LNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHIL-LTIKCLLIVPN 128

Query: 154 PESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTGAISES 157
           PESALNE+AGKMLLE YD+Y++ AR+ T IHA+P  K   GA+ ++
Sbjct: 129 PESALNEEAGKMLLERYDDYSQRARMMTEIHAQP-AKCGVGAVGDA 172

[Close]

BLAST of Lsi01G017280 vs. ExPASy Swiss-Prot
Match: A7SE05 (Ubiquitin-conjugating enzyme E2 S OS=Nematostella vectensis OX=45351 GN=v1g237158 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.1e-18
Identity = 58/153 (37.91%), Postives = 79/153 (51.63%), Query Frame = 0


Query: 34  ENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGP-------GILR---- 93
           EN  P +IKQ+A+E+  L   PPEGIKV  ND+D + I A IEGP       GI +    
Sbjct: 9   ENFSPQIIKQVAREIHGLTNDPPEGIKVFSNDEDITDIQASIEGPTGTPYEGGIFKIKLV 68

Query: 94  --------------------------------CLVSESLYDIGVMWIVEQVVRCLLIEPF 144
                                            L  +   D+G+  ++   V+CLLI P 
Sbjct: 69  LGKDFPAAPPKGFFLTKIFHPNVAKNGEICVNTLKKDWKPDLGIKQVL-LTVKCLLIVPN 128

[Close]

BLAST of Lsi01G017280 vs. ExPASy Swiss-Prot
Match: B3MQV3 (Ubiquitin-conjugating enzyme E2 S OS=Drosophila ananassae OX=7217 GN=GF21161 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.7e-18
Identity = 62/166 (37.35%), Postives = 86/166 (51.81%), Query Frame = 0


Query: 34  ENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGP-------GILR---- 93
           ENL P  I+Q+ +EL+ ++ +PPEGIKV +N+ D + I A I+GP       GI R    
Sbjct: 9   ENLSPQTIRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLT 68

Query: 94  --------------------------------CLVSESLYDIGVMWIVEQVVRCLLIEPF 153
                                            L  +   D+G+  I+   ++CLLI P 
Sbjct: 69  LNKDFPQTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHIL-LTIKCLLIVPN 128

Query: 154 PESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTGAISES 157
           PESALNE+AGKMLLE YD+Y++ AR+ T IHA+P  K   GA  +S
Sbjct: 129 PESALNEEAGKMLLERYDDYSQRARMMTEIHAQP-AKCAAGAAGDS 172

[Close]

BLAST of Lsi01G017280 vs. ExPASy TrEMBL
Match: A0A6J1EAT8 (ubiquitin-conjugating enzyme E2 22-like OS=Cucurbita moschata OX=3662 GN=LOC111432427 PE=3 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 3.2e-83
Identity = 188/271 (69.37%), Postives = 200/271 (73.80%), Query Frame = 0


Query: 30  VATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGP-------GILR 89
           +ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTI+ADIEGP       G+ R
Sbjct: 1   MATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPVGTPYENGLFR 60

Query: 90  ----------CLVSESLY--------------------------DIGVMWIVEQVVRCLL 149
                     C   +  +                           +G+  ++  VVRCLL
Sbjct: 61  MKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVL-IVVRCLL 120

Query: 150 IEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTGAISESTTALNVDPTN 209
           IEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFK+GAISESTTALNVDPTN
Sbjct: 121 IEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKSGAISESTTALNVDPTN 180

Query: 210 ASALNTDLKNTSATALPLACPTPHSNTTVRGGQEQQQPNVVAAPASESGVGGSGVAAAPA 258
           ASALNTDLKNTSA  L  ACPT +SNT VRGGQE QQPN    PA ESGVGGSGVAA   
Sbjct: 181 ASALNTDLKNTSAAVLSSACPTANSNTAVRGGQE-QQPNTTTPPALESGVGGSGVAA--P 240

[Close]

BLAST of Lsi01G017280 vs. ExPASy TrEMBL
Match: A0A5A7VIJ3 (Ubiquitin-conjugating enzyme E2 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G00920 PE=3 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 9.4e-83
Identity = 191/272 (70.22%), Postives = 201/272 (73.90%), Query Frame = 0


Query: 30  VATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGP-------GILR 89
           VATNENLPPNVIKQLAKELKSLDESPPEGIKV VNDDDFSTIFADIEGP       G+ R
Sbjct: 31  VATNENLPPNVIKQLAKELKSLDESPPEGIKVVVNDDDFSTIFADIEGPVGTPYENGLFR 90

Query: 90  ----------CLVSESLY--------------------------DIGVMWIVEQVVRCLL 149
                     C   +  +                           +G+  ++  VVRCLL
Sbjct: 91  MKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVL-IVVRCLL 150

Query: 150 IEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTGAISESTTALNVDPTN 209
           IEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTGAISESTTALNVDPTN
Sbjct: 151 IEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTGAISESTTALNVDPTN 210

Query: 210 ASALNTDLKNTSATALPLACPTPHSNTTVRGGQEQQQPNVVAAPASESGVGGSGVAAAPA 258
           ASAL+TDLKN SATALPLACPT +S T VR GQEQQQPNVV A ASESGVG SGV  AP 
Sbjct: 211 ASALSTDLKNASATALPLACPTANSTTAVRSGQEQQQPNVVTALASESGVGVSGVGVAP- 270

[Close]

BLAST of Lsi01G017280 vs. ExPASy TrEMBL
Match: A0A1S3CLW5 (ubiquitin-conjugating enzyme E2 22 OS=Cucumis melo OX=3656 GN=LOC103502453 PE=3 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 2.1e-82
Identity = 190/272 (69.85%), Postives = 201/272 (73.90%), Query Frame = 0


Query: 30  VATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGP-------GILR 89
           +ATNENLPPNVIKQLAKELKSLDESPPEGIKV VNDDDFSTIFADIEGP       G+ R
Sbjct: 1   MATNENLPPNVIKQLAKELKSLDESPPEGIKVVVNDDDFSTIFADIEGPVGTPYENGLFR 60

Query: 90  ----------CLVSESLY--------------------------DIGVMWIVEQVVRCLL 149
                     C   +  +                           +G+  ++  VVRCLL
Sbjct: 61  MKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVL-IVVRCLL 120

Query: 150 IEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTGAISESTTALNVDPTN 209
           IEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTGAISESTTALNVDPTN
Sbjct: 121 IEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTGAISESTTALNVDPTN 180

Query: 210 ASALNTDLKNTSATALPLACPTPHSNTTVRGGQEQQQPNVVAAPASESGVGGSGVAAAPA 258
           ASAL+TDLKN SATALPLACPT +S T VR GQEQQQPNVV A ASESGVG SGV  AP 
Sbjct: 181 ASALSTDLKNASATALPLACPTANSTTAVRSGQEQQQPNVVTALASESGVGVSGVGVAP- 240

[Close]

BLAST of Lsi01G017280 vs. ExPASy TrEMBL
Match: A0A5D3BZH9 (Ubiquitin-conjugating enzyme E2 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold527G00180 PE=3 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 3.6e-82
Identity = 190/272 (69.85%), Postives = 200/272 (73.53%), Query Frame = 0


Query: 30  VATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGP-------GILR 89
           VATNENLPPNVIKQLAKELKSLDESPPEGIKV VNDDDFSTIFADIEGP       G+ R
Sbjct: 31  VATNENLPPNVIKQLAKELKSLDESPPEGIKVVVNDDDFSTIFADIEGPVGTPYENGLFR 90

Query: 90  ----------CLVSESLY--------------------------DIGVMWIVEQVVRCLL 149
                     C   +  +                           +G+  ++  VVRCLL
Sbjct: 91  MKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVL-IVVRCLL 150

Query: 150 IEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTGAISESTTALNVDPTN 209
           IEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFK GAISESTTALNVDPTN
Sbjct: 151 IEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKAGAISESTTALNVDPTN 210

Query: 210 ASALNTDLKNTSATALPLACPTPHSNTTVRGGQEQQQPNVVAAPASESGVGGSGVAAAPA 258
           ASAL+TDLKN SATALPLACPT +S T VR GQEQQQPNVV A ASESGVG SGV  AP 
Sbjct: 211 ASALSTDLKNASATALPLACPTANSTTAVRSGQEQQQPNVVTALASESGVGVSGVGVAP- 270

[Close]

BLAST of Lsi01G017280 vs. ExPASy TrEMBL
Match: A0A6J1DJU4 (ubiquitin-conjugating enzyme E2 22 OS=Momordica charantia OX=3673 GN=LOC111021777 PE=3 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 3.6e-82
Identity = 188/274 (68.61%), Postives = 200/274 (72.99%), Query Frame = 0


Query: 30  VATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGP-------GILR 89
           +ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTI+ADIEGP       G+ R
Sbjct: 1   MATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPAGTPYENGLFR 60

Query: 90  ----------CLVSESLY--------------------------DIGVMWIVEQVVRCLL 149
                     C   +  +                           +G+  ++  VVRCLL
Sbjct: 61  MKLILSHDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVL-IVVRCLL 120

Query: 150 IEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTGAISESTTALNVDPTN 209
           IEPFPESALNEQAGKMLLENYDEYARHAR+YTGIHAKPKPKFKTGAISESTTALNVDPTN
Sbjct: 121 IEPFPESALNEQAGKMLLENYDEYARHARIYTGIHAKPKPKFKTGAISESTTALNVDPTN 180

Query: 210 ASALNTDLKNTSATALPLACPTPHSNTTVRGGQEQQQPNVVAAPASESGVGGSGVAAAPA 258
           ASALNTDLKNTSA ALPLACPT HSNT VRGGQEQQ  +  A P +ESGVGGSGV     
Sbjct: 181 ASALNTDLKNTSAAALPLACPTAHSNTAVRGGQEQQ--SNAATPTTESGVGGSGV----- 240

[Close]

BLAST of Lsi01G017280 vs. NCBI nr
Match: XP_038881813.1 (ubiquitin-conjugating enzyme E2 22 [Benincasa hispida])

HSP 1 Score: 325.9 bits (834), Expect = 3.2e-85
Identity = 192/271 (70.85%), Postives = 201/271 (74.17%), Query Frame = 0


Query: 30  VATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGP-------GILR 89
           +ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGP       G+ R
Sbjct: 1   MATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPVGTPYENGLFR 60

Query: 90  ----------CLVSESLY--------------------------DIGVMWIVEQVVRCLL 149
                     C   +  +                           +G+  ++  VVRCLL
Sbjct: 61  MKLILSHDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVL-IVVRCLL 120

Query: 150 IEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTGAISESTTALNVDPTN 209
           IEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTGAISESTTALNVDP N
Sbjct: 121 IEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTGAISESTTALNVDPIN 180

Query: 210 ASALNTDLKNTSATALPLACPTPHSNTTVRGGQEQQQPNVVAAPASESGVGGSGVAAAPA 258
            SALNTDL NTSA ALPLACPT HSNT VRGGQEQQQPNVV+ PASESGVGGSG     A
Sbjct: 181 TSALNTDLINTSA-ALPLACPTAHSNTAVRGGQEQQQPNVVSTPASESGVGGSG----GA 240

[Close]

BLAST of Lsi01G017280 vs. NCBI nr
Match: XP_023518784.1 (ubiquitin-conjugating enzyme E2 22-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 318.9 bits (816), Expect = 3.9e-83
Identity = 189/272 (69.49%), Postives = 203/272 (74.63%), Query Frame = 0


Query: 30  VATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGP-------GILR 89
           +ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTI+ADIEGP       G+ R
Sbjct: 1   MATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPVGTPYENGLFR 60

Query: 90  ----------CLVSESLY--------------------------DIGVMWIVEQVVRCLL 149
                     C   +  +                           +G+  ++  VVRCLL
Sbjct: 61  MKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVL-IVVRCLL 120

Query: 150 IEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTGAISESTTALNVDPTN 209
           IEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFK+GAISESTTALNVDPTN
Sbjct: 121 IEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKSGAISESTTALNVDPTN 180

Query: 210 ASALNTDLKNTSATALPLACPTPHSNTTVRGGQEQQQPNVVAAPASESGVGGSGVAA-AP 258
           ASALNTDLKNTSA  L  ACPT +SNT VRGGQE QQPN+ A PA ESGVG SG+AA A 
Sbjct: 181 ASALNTDLKNTSAAVLSSACPTANSNTAVRGGQE-QQPNITAPPALESGVGVSGMAAPAA 240

[Close]

BLAST of Lsi01G017280 vs. NCBI nr
Match: XP_022925072.1 (ubiquitin-conjugating enzyme E2 22-like [Cucurbita moschata])

HSP 1 Score: 318.2 bits (814), Expect = 6.7e-83
Identity = 188/271 (69.37%), Postives = 200/271 (73.80%), Query Frame = 0


Query: 30  VATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGP-------GILR 89
           +ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTI+ADIEGP       G+ R
Sbjct: 1   MATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPVGTPYENGLFR 60

Query: 90  ----------CLVSESLY--------------------------DIGVMWIVEQVVRCLL 149
                     C   +  +                           +G+  ++  VVRCLL
Sbjct: 61  MKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVL-IVVRCLL 120

Query: 150 IEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTGAISESTTALNVDPTN 209
           IEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFK+GAISESTTALNVDPTN
Sbjct: 121 IEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKSGAISESTTALNVDPTN 180

Query: 210 ASALNTDLKNTSATALPLACPTPHSNTTVRGGQEQQQPNVVAAPASESGVGGSGVAAAPA 258
           ASALNTDLKNTSA  L  ACPT +SNT VRGGQE QQPN    PA ESGVGGSGVAA   
Sbjct: 181 ASALNTDLKNTSAAVLSSACPTANSNTAVRGGQE-QQPNTTTPPALESGVGGSGVAA--P 240

[Close]

BLAST of Lsi01G017280 vs. NCBI nr
Match: KAG7027455.1 (Ubiquitin-conjugating enzyme E2 22, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 317.0 bits (811), Expect = 1.5e-82
Identity = 191/288 (66.32%), Postives = 201/288 (69.79%), Query Frame = 0


Query: 31  ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPGILRCLVSESLY 90
           ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTI+ADIEGPG+    ++ SL 
Sbjct: 39  ATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIYADIEGPGM--SFITPSLK 98

Query: 91  DIGVMWI----------------------------------------------------- 150
            I + W+                                                     
Sbjct: 99  FISLSWMGTPYENGLFRMKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWN 158

Query: 151 -------VEQVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKT 210
                  V  VVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFK+
Sbjct: 159 PSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKS 218

Query: 211 GAISESTTALNVDPTNASALNTDLKNTSATALPLACPTPHSNTTVRGGQEQQQPNVVA-A 258
           GAISESTTALNVDPTNASALNTDLKNTSA  L  ACPT +SNT VRGGQE QQPN+ A  
Sbjct: 219 GAISESTTALNVDPTNASALNTDLKNTSAAVLSSACPTANSNTAVRGGQE-QQPNITAPP 278

[Close]

BLAST of Lsi01G017280 vs. NCBI nr
Match: KAA0067923.1 (ubiquitin-conjugating enzyme E2 22 [Cucumis melo var. makuwa])

HSP 1 Score: 316.6 bits (810), Expect = 1.9e-82
Identity = 191/272 (70.22%), Postives = 201/272 (73.90%), Query Frame = 0


Query: 30  VATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGP-------GILR 89
           VATNENLPPNVIKQLAKELKSLDESPPEGIKV VNDDDFSTIFADIEGP       G+ R
Sbjct: 31  VATNENLPPNVIKQLAKELKSLDESPPEGIKVVVNDDDFSTIFADIEGPVGTPYENGLFR 90

Query: 90  ----------CLVSESLY--------------------------DIGVMWIVEQVVRCLL 149
                     C   +  +                           +G+  ++  VVRCLL
Sbjct: 91  MKLILSRDFPCSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVL-IVVRCLL 150

Query: 150 IEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTGAISESTTALNVDPTN 209
           IEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTGAISESTTALNVDPTN
Sbjct: 151 IEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTGAISESTTALNVDPTN 210

Query: 210 ASALNTDLKNTSATALPLACPTPHSNTTVRGGQEQQQPNVVAAPASESGVGGSGVAAAPA 258
           ASAL+TDLKN SATALPLACPT +S T VR GQEQQQPNVV A ASESGVG SGV  AP 
Sbjct: 211 ASALSTDLKNASATALPLACPTANSTTAVRSGQEQQQPNVVTALASESGVGVSGVGVAP- 270

[Close]

BLAST of Lsi01G017280 vs. TAIR 10
Match: AT5G05080.1 (ubiquitin-conjugating enzyme 22 )

HSP 1 Score: 214.2 bits (544), Expect = 1.3e-55
Identity = 143/270 (52.96%), Postives = 161/270 (59.63%), Query Frame = 0


Query: 30  VATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGP-------GILR 89
           +A+NENLPPNVIKQLAKELKSLDESPP+GIKV VND+DFS I ADIEGP       G+ R
Sbjct: 1   MASNENLPPNVIKQLAKELKSLDESPPDGIKVVVNDEDFSQICADIEGPVGTPYENGLFR 60

Query: 90  CLVSES--------------------LYDIGVMWI---------------VEQVVRCLLI 149
             ++ S                    +   G + +               V  VVRCLLI
Sbjct: 61  MKLALSHDFPHSPPKGYFMTKIFHPNVASNGEICVNTLKKDWNPSLGLRHVLSVVRCLLI 120

Query: 150 EPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTGAISESTTALNVDPTNA 209
           EPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTGAISESTTALNV  TN 
Sbjct: 121 EPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTGAISESTTALNVGQTNN 180

Query: 210 SALNTDLKNTSATALPLACPTPHSNTTVRGGQEQQQPNVVAAPASESGVGGSGVAAAPAA 258
                     +ATA+P +  T     T     +Q   NVV A            A+A   
Sbjct: 181 ETPG------AATAIP-SSMTDIKRVTTSAQDQQHVANVVVA------------ASASVV 240

[Close]

BLAST of Lsi01G017280 vs. TAIR 10
Match: AT5G05080.2 (ubiquitin-conjugating enzyme 22 )

HSP 1 Score: 214.2 bits (544), Expect = 1.3e-55
Identity = 143/270 (52.96%), Postives = 161/270 (59.63%), Query Frame = 0


Query: 30  VATNENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGP-------GILR 89
           +A+NENLPPNVIKQLAKELKSLDESPP+GIKV VND+DFS I ADIEGP       G+ R
Sbjct: 1   MASNENLPPNVIKQLAKELKSLDESPPDGIKVVVNDEDFSQICADIEGPVGTPYENGLFR 60

Query: 90  CLVSES--------------------LYDIGVMWI---------------VEQVVRCLLI 149
             ++ S                    +   G + +               V  VVRCLLI
Sbjct: 61  MKLALSHDFPHSPPKGYFMTKIFHPNVASNGEICVNTLKKDWNPSLGLRHVLSVVRCLLI 120

Query: 150 EPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTGAISESTTALNVDPTNA 209
           EPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTGAISESTTALNV  TN 
Sbjct: 121 EPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTGAISESTTALNVGQTNN 180

Query: 210 SALNTDLKNTSATALPLACPTPHSNTTVRGGQEQQQPNVVAAPASESGVGGSGVAAAPAA 258
                     +ATA+P +  T     T     +Q   NVV A            A+A   
Sbjct: 181 ETPG------AATAIP-SSMTDIKRVTTSAQDQQHVANVVVA------------ASASVV 240

The following BLAST results are available for this feature:

BLAST of Lsi01G017280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FF66	1.8e-54	52.96	Ubiquitin-conjugating enzyme E2 22 OS=Arabidopsis thaliana OX=3702 GN=UBC22 PE=1...	[more]
C3Z724	2.1e-18	36.94	Ubiquitin-conjugating enzyme E2 S OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAF...	[more]
Q9VX25	2.1e-18	37.35	Ubiquitin-conjugating enzyme E2 S OS=Drosophila melanogaster OX=7227 GN=CG8188 P...	[more]
A7SE05	2.1e-18	37.91	Ubiquitin-conjugating enzyme E2 S OS=Nematostella vectensis OX=45351 GN=v1g23715...	[more]
B3MQV3	2.7e-18	37.35	Ubiquitin-conjugating enzyme E2 S OS=Drosophila ananassae OX=7217 GN=GF21161 PE=...	[more]

BLAST of Lsi01G017280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EAT8	3.2e-83	69.37	ubiquitin-conjugating enzyme E2 22-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A5A7VIJ3	9.4e-83	70.22	Ubiquitin-conjugating enzyme E2 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A1S3CLW5	2.1e-82	69.85	ubiquitin-conjugating enzyme E2 22 OS=Cucumis melo OX=3656 GN=LOC103502453 PE=3 ...	[more]
A0A5D3BZH9	3.6e-82	69.85	Ubiquitin-conjugating enzyme E2 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6J1DJU4	3.6e-82	68.61	ubiquitin-conjugating enzyme E2 22 OS=Momordica charantia OX=3673 GN=LOC11102177...	[more]

BLAST of Lsi01G017280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881813.1	3.2e-85	70.85	ubiquitin-conjugating enzyme E2 22 [Benincasa hispida]	[more]
XP_023518784.1	3.9e-83	69.49	ubiquitin-conjugating enzyme E2 22-like [Cucurbita pepo subsp. pepo]	[more]
XP_022925072.1	6.7e-83	69.37	ubiquitin-conjugating enzyme E2 22-like [Cucurbita moschata]	[more]
KAG7027455.1	1.5e-82	66.32	Ubiquitin-conjugating enzyme E2 22, partial [Cucurbita argyrosperma subsp. argyr...	[more]
KAA0067923.1	1.9e-82	70.22	ubiquitin-conjugating enzyme E2 22 [Cucumis melo var. makuwa]	[more]

BLAST of Lsi01G017280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05080.1	1.3e-55	52.96	ubiquitin-conjugating enzyme 22	[more]
AT5G05080.2	1.3e-55	52.96	ubiquitin-conjugating enzyme 22	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 96..155 e-value: 9.4E-7 score: 30.3
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 28..95 e-value: 4.4E-6 score: 28.3
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 31..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 189..257
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 189..209
None	No IPR available	PANTHER	PTHR24068:SF297	UBIQUITIN-CONJUGATING ENZYME E2 22-LIKE	coord: 98..251 coord: 33..78
None	No IPR available	PANTHER	PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	coord: 98..251 coord: 33..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G017280.1	Lsi01G017280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000209	protein polyubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0061631	ubiquitin conjugating enzyme activity