Lsi01G016990 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi01G016990
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProline-rich protein HaeIII subfamily 1-like
Locationchr01: 15648315 .. 15648980 (+)
RNA-Seq ExpressionLsi01G016990
SyntenyLsi01G016990
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTCAATTGGTTCTTCTAATGTGTTTTTCGGAGCTTGTGCTCTCGTACTCCTTGGGTTGCACATTACAATCTATCAAGCAGATGCCAAAAATAATTTTATAGTCGACGAAGGCGACTCTATTGTAGAAAACGAATTAAGCGGCCAGAATTTAAAGCATCAGAAAACGCGTATACATTTCTCACTAGGGAAACGCAAGAGAGTACCTGACTTAGCTCCACCTTTCAGCTTGGGAATACTATCCAATAAAGAACGCACTCCCCCGTCTGGACCGAGTCAAAGAACTTCAGACAATACACCTCCCCCGCCGCATGCCTCATCCATCGTTTTACACAAGCACTCCGGGATCAGCTATGGAATATTACCAAAAGGCGTGCGCATTCCTCTGTCTGCGCCGAGTCAAAGGACTTCTGAGAGTCCACCTCCCCCACCACATGTCCCACCCGTCGTTTTACACGAGGAATCTGGGATCAACTTCGGAGTATTACCAAAAGGAGTGCGTATTCCTCCGTCTGGGCCGAGCAAAAGATTTTCGGACTATCCACCTCCTCCACCGCATGCTCCTTCCGTTGTTTTACATGAAGAATCTAAGATCCATTTTGCGAGGTATCCTAGACATGCACCTATTCCACCATCTGCTCCAAGCGGACGGGTACCATTATGA

mRNA sequence

ATGGTGTCAATTGGTTCTTCTAATGTGTTTTTCGGAGCTTGTGCTCTCGTACTCCTTGGGTTGCACATTACAATCTATCAAGCAGATGCCAAAAATAATTTTATAGTCGACGAAGGCGACTCTATTGTAGAAAACGAATTAAGCGGCCAGAATTTAAAGCATCAGAAAACGCGTATACATTTCTCACTAGGGAAACGCAAGAGAGTACCTGACTTAGCTCCACCTTTCAGCTTGGGAATACTATCCAATAAAGAACGCACTCCCCCGTCTGGACCGAGTCAAAGAACTTCAGACAATACACCTCCCCCGCCGCATGCCTCATCCATCGTTTTACACAAGCACTCCGGGATCAGCTATGGAATATTACCAAAAGGCGTGCGCATTCCTCTGTCTGCGCCGAGTCAAAGGACTTCTGAGAGTCCACCTCCCCCACCACATGTCCCACCCGTCGTTTTACACGAGGAATCTGGGATCAACTTCGGAGTATTACCAAAAGGAGTGCGTATTCCTCCGTCTGGGCCGAGCAAAAGATTTTCGGACTATCCACCTCCTCCACCGCATGCTCCTTCCGTTGTTTTACATGAAGAATCTAAGATCCATTTTGCGAGGTATCCTAGACATGCACCTATTCCACCATCTGCTCCAAGCGGACGGGTACCATTATGA

Coding sequence (CDS)

ATGGTGTCAATTGGTTCTTCTAATGTGTTTTTCGGAGCTTGTGCTCTCGTACTCCTTGGGTTGCACATTACAATCTATCAAGCAGATGCCAAAAATAATTTTATAGTCGACGAAGGCGACTCTATTGTAGAAAACGAATTAAGCGGCCAGAATTTAAAGCATCAGAAAACGCGTATACATTTCTCACTAGGGAAACGCAAGAGAGTACCTGACTTAGCTCCACCTTTCAGCTTGGGAATACTATCCAATAAAGAACGCACTCCCCCGTCTGGACCGAGTCAAAGAACTTCAGACAATACACCTCCCCCGCCGCATGCCTCATCCATCGTTTTACACAAGCACTCCGGGATCAGCTATGGAATATTACCAAAAGGCGTGCGCATTCCTCTGTCTGCGCCGAGTCAAAGGACTTCTGAGAGTCCACCTCCCCCACCACATGTCCCACCCGTCGTTTTACACGAGGAATCTGGGATCAACTTCGGAGTATTACCAAAAGGAGTGCGTATTCCTCCGTCTGGGCCGAGCAAAAGATTTTCGGACTATCCACCTCCTCCACCGCATGCTCCTTCCGTTGTTTTACATGAAGAATCTAAGATCCATTTTGCGAGGTATCCTAGACATGCACCTATTCCACCATCTGCTCCAAGCGGACGGGTACCATTATGA

Protein sequence

MVSIGSSNVFFGACALVLLGLHITIYQADAKNNFIVDEGDSIVENELSGQNLKHQKTRIHFSLGKRKRVPDLAPPFSLGILSNKERTPPSGPSQRTSDNTPPPPHASSIVLHKHSGISYGILPKGVRIPLSAPSQRTSESPPPPPHVPPVVLHEESGINFGVLPKGVRIPPSGPSKRFSDYPPPPPHAPSVVLHEESKIHFARYPRHAPIPPSAPSGRVPL
Homology
BLAST of Lsi01G016990 vs. ExPASy TrEMBL
Match: A0A5D3CGG1 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G00020 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 2.5e-52
Identity = 117/195 (60.00%), Postives = 144/195 (73.85%), Query Frame = 0

Query: 1   MVSIGSSNVFFGACALVLLGLHITIYQADAKNNFIVDEGDSIVENELSGQNLKHQKTRIH 60
           MVS+G +N+FF ACAL+ LGLH  IY  +AK +F+VDE +S +EN L G  + H K   H
Sbjct: 1   MVSVG-TNIFFRACALIFLGLHFEIYLTNAKRSFVVDEDNSSLENVLRGDIINHPKKVAH 60

Query: 61  FSLGKRKRVPDLAPPFSLGILSNKERTPPSGPSQRTSDNTPPPPHASSIVLHKHSGISYG 120
           FS  K K++PDLAPPFSLGILS   RTPPSG SQ TS+N PP PH + I+LHK S +++G
Sbjct: 61  FSWPKPKKIPDLAPPFSLGILSKGIRTPPSGLSQGTSNN-PPSPHVAPIILHKESMVNFG 120

Query: 121 ILPKGVRIPLSAPSQRTSESPPPPPHVPPVVLHEESGINFGVLPKGVRIPPSGPSKRFSD 180
           ILPKGVRIP S PS+RTS+ PPP  +   +   +ES I +G+LPKGVRIPPSGPSKR SD
Sbjct: 121 ILPKGVRIPPSGPSRRTSDPPPPLSNFHSI---KESRIKYGILPKGVRIPPSGPSKRNSD 180

Query: 181 YPPPPP---HAPSVV 193
           Y PPPP   HAPS++
Sbjct: 181 YYPPPPMHLHAPSII 190

BLAST of Lsi01G016990 vs. ExPASy TrEMBL
Match: A0A5D3BP86 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold109G00050 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 9.7e-44
Identity = 106/192 (55.21%), Postives = 129/192 (67.19%), Query Frame = 0

Query: 1   MVSIGSSNVFFGACALVLLGLHITIYQADAKNNFIVDEGDSIVENELSGQNLKHQKTRIH 60
           M+SI SSN+ F  CA+VLLGLH  IYQ + +N F V E +S+ ENEL   ++ H K  IH
Sbjct: 1   MMSI-SSNMTFKTCAIVLLGLHFGIYQTNGRNLFEVKEDNSVFENELKANSIIHPKQYIH 60

Query: 61  FSLGKRKRVPDLAPPFSLGILSNKERTPPSGPSQRTSDNTPPPPHASSIVLHKHSGISYG 120
           FSL K K  P+    F  GI S   R PPSGPSQR+SD+ P P    S++L K S I++G
Sbjct: 61  FSLTKSKGKPEFDTHFRFGIFSKDVRIPPSGPSQRSSDSPPSP----SMILPKESRINFG 120

Query: 121 ILPKGVRIPLSAPSQRTSESPPPPPHVPPVVLHEESGINFGVLPKGVRIPPSGPSKRFSD 180
           ILPKG RIP S PSQR S+SP P    P   LH+ S + FG+LPKG  IPPSGPSKR SD
Sbjct: 121 ILPKGSRIPPSGPSQRFSDSPLP----PSTFLHKGSNMIFGMLPKGHHIPPSGPSKRTSD 180

Query: 181 YPPPPPHAPSVV 193
            PPPPPH+PS++
Sbjct: 181 NPPPPPHSPSLI 183

BLAST of Lsi01G016990 vs. ExPASy TrEMBL
Match: A0A6J1HRH7 (actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3661 GN=LOC111467141 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 4.8e-43
Identity = 106/197 (53.81%), Postives = 133/197 (67.51%), Query Frame = 0

Query: 25  IYQADAKNNFIVDEGDSIVENELSGQNLKHQK-TRIHFSLGKRKRVPDLAPPFSL--GIL 84
           IY+ DAKN   VD  D+I E EL+   +++ K   I  S   ++ +    P  SL  G+L
Sbjct: 185 IYETDAKNVVEVDVDDNIREAELTDLIVQNPKGISISSSRSSQRTLFHRTPSPSLVFGML 244

Query: 85  SNKERTPPSGPSQRTSDNTPPPPHASSIVLHKHSGISYGILPKGVRIPLSAPSQRTSESP 144
                 PPS PSQRTSD  PPPP ASSI+L+KHS I+ G+LP+GV IP S PSQRTS+ P
Sbjct: 245 PKGVPIPPSRPSQRTSDYPPPPPRASSIILNKHSKINLGMLPRGVPIPPSGPSQRTSDYP 304

Query: 145 PPPPHVPPVVLHEESGINFGVLPKGVRIPPSGPSKRFSDYPPPPPHAPSVVLHEESKIHF 204
           PPPPH   V+L+++S INFG+LPKGV IPPSGPS+R S YPPPPP A SV+L+++SKI+ 
Sbjct: 305 PPPPHASSVILNKQSKINFGMLPKGVPIPPSGPSQRTSXYPPPPPRASSVILNKQSKIYL 364

Query: 205 ARYPRHAPIPPSAPSGR 219
              PR  PIPP   S R
Sbjct: 365 GMLPRGVPIPPPGLSQR 381

BLAST of Lsi01G016990 vs. ExPASy TrEMBL
Match: A0A5A7T8R0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001740 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.9e-31
Identity = 94/227 (41.41%), Postives = 117/227 (51.54%), Query Frame = 0

Query: 6   SSNVFFGACALVLLGLHITIYQADAKNNFIVDEGDSIVENELSGQNLKHQKTRIHFSLGK 65
           SSNV FG CAL+LLGLH   Y  DA++  +  EG+ ++EN+L+   ++H K  I FS  K
Sbjct: 12  SSNVLFGTCALILLGLHFETYHIDARSFSVFGEGNYVIENQLTDHVIEHPKRHIRFSWPK 71

Query: 66  RKRVPDLAPPFSLGILSNKERTPPS----------------------GPSQRTSDNTPP- 125
            KRVPDLAPPFSLGIL+    TPPS                         +R  D  PP 
Sbjct: 72  PKRVPDLAPPFSLGILTKDILTPPSENELGDNIVKHPKSHIRFSWVWPKPKRVPDLAPPF 131

Query: 126 -----------PPHAS----SIVLHKHSGI-----------------SYGILPKGVRIPL 178
                      PP  +    SI  H  + I                 S GIL K VR P 
Sbjct: 132 SLGILNNHLRNPPSENELGHSITKHPKNHIRFSWPKPKRVPDLAPPFSLGILLKDVRTPP 191

BLAST of Lsi01G016990 vs. ExPASy TrEMBL
Match: A0A5D3BVE5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2454G00110 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 4.2e-31
Identity = 95/227 (41.85%), Postives = 116/227 (51.10%), Query Frame = 0

Query: 6   SSNVFFGACALVLLGLHITIYQADAKNNFIVDEGDSIVENELSGQNLKHQKTRIHFSLGK 65
           SSNV FGACAL+LLG H   Y  DA+   +V EG+ ++EN+L+   ++H K  I FS  K
Sbjct: 5   SSNVLFGACALILLGFHFETYHIDARRFSVVGEGNYVIENQLTDHVIEHPKRHIRFSWPK 64

Query: 66  RKRVPDLAPPFSLGILSNKERTPPS----------------------GPSQRTSDNTPP- 125
            KRVPDLAPPFSLGIL+    TPPS                         +R  D  PP 
Sbjct: 65  PKRVPDLAPPFSLGILTKDVLTPPSENEVGDNIVKHPKNHIRFSWIWPKPKRVPDLAPPF 124

Query: 126 -----------PPHAS----SIVLHKHSGI-----------------SYGILPKGVRIPL 178
                      PP  +    SI  H  S I                 S GIL K VR P 
Sbjct: 125 SLGILNNHLRTPPSENELGHSITKHPKSHIRFSWPKPKRVPDLAPPFSLGILSKDVRTPP 184

BLAST of Lsi01G016990 vs. NCBI nr
Match: XP_038882352.1 (uncharacterized protein LOC120073615 [Benincasa hispida])

HSP 1 Score: 279.6 bits (714), Expect = 2.3e-71
Identity = 136/192 (70.83%), Postives = 157/192 (81.77%), Query Frame = 0

Query: 1   MVSIGSSNVFFGACALVLLGLHITIYQADAKNNFIVDEGDSIVENELSGQNLKHQKTRIH 60
           MVSI  SNVFFGACA + LGLH TIYQ DAKN F+V++GDS +ENELS +N+KH K  IH
Sbjct: 1   MVSISYSNVFFGACAFIFLGLHSTIYQTDAKNVFVVEKGDSTIENELSDENIKHPKRHIH 60

Query: 61  FSLGKRKRVPDLAPPFSLGILSNKERTPPSGPSQRTSDNTPPPPHASSIVLHKHSGISYG 120
           FSLGK KR+PDLAPPF+LGILS +ER PPSG SQ TSDN PPPPH  SI+LHK S I++ 
Sbjct: 61  FSLGKYKRIPDLAPPFNLGILSKEERVPPSGLSQSTSDNPPPPPHVISIILHKESRINFR 120

Query: 121 ILPKGVRIPLSAPSQRTSESPPPPPHVPPVVLHEESGINFGVLPKGVRIPPSGPSKRFSD 180
           +L KG RIP S PSQRTSESPPPPPH   V+LH++ GINFG+LPK + IPPSGPSKRFS+
Sbjct: 121 VLSKGNRIPPSGPSQRTSESPPPPPHALSVILHKKPGINFGILPKSMHIPPSGPSKRFSN 180

Query: 181 YPPPPPHAPSVV 193
           YP PP HAPSV+
Sbjct: 181 YPSPPTHAPSVI 192

BLAST of Lsi01G016990 vs. NCBI nr
Match: KAA0040932.1 (proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK10605.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 215.3 bits (547), Expect = 5.3e-52
Identity = 117/195 (60.00%), Postives = 144/195 (73.85%), Query Frame = 0

Query: 1   MVSIGSSNVFFGACALVLLGLHITIYQADAKNNFIVDEGDSIVENELSGQNLKHQKTRIH 60
           MVS+G +N+FF ACAL+ LGLH  IY  +AK +F+VDE +S +EN L G  + H K   H
Sbjct: 1   MVSVG-TNIFFRACALIFLGLHFEIYLTNAKRSFVVDEDNSSLENVLRGDIINHPKKVAH 60

Query: 61  FSLGKRKRVPDLAPPFSLGILSNKERTPPSGPSQRTSDNTPPPPHASSIVLHKHSGISYG 120
           FS  K K++PDLAPPFSLGILS   RTPPSG SQ TS+N PP PH + I+LHK S +++G
Sbjct: 61  FSWPKPKKIPDLAPPFSLGILSKGIRTPPSGLSQGTSNN-PPSPHVAPIILHKESMVNFG 120

Query: 121 ILPKGVRIPLSAPSQRTSESPPPPPHVPPVVLHEESGINFGVLPKGVRIPPSGPSKRFSD 180
           ILPKGVRIP S PS+RTS+ PPP  +   +   +ES I +G+LPKGVRIPPSGPSKR SD
Sbjct: 121 ILPKGVRIPPSGPSRRTSDPPPPLSNFHSI---KESRIKYGILPKGVRIPPSGPSKRNSD 180

Query: 181 YPPPPP---HAPSVV 193
           Y PPPP   HAPS++
Sbjct: 181 YYPPPPMHLHAPSII 190

BLAST of Lsi01G016990 vs. NCBI nr
Match: KAG6603169.1 (hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 191.4 bits (485), Expect = 8.1e-45
Identity = 108/200 (54.00%), Postives = 136/200 (68.00%), Query Frame = 0

Query: 23  ITIYQADAKNNFIVDEGDSIVENELSGQNLKHQK-TRIHFSLGKRKRVPDLA--PPFSLG 82
           + +Y+ DAK    VD  D+I E EL+ Q +KH K   I  S   ++ +  L   PP  L 
Sbjct: 23  VQVYETDAKKVVEVDVYDTIREEELTDQMVKHPKGISISSSRSSQRTLFHLTPPPPVVLR 82

Query: 83  ILSNKERTPPSGPSQRTSDNTPPPPHASSIVLHKHSGISYGILPKGVRIPLSAPSQRTSE 142
           +L       PSGPSQRTSD  PPPP ASS++L K S I++G+LPKGV IP S PSQRTS+
Sbjct: 83  MLPKGVPISPSGPSQRTSDYPPPPPRASSVILSKQSKINFGMLPKGVPIPPSGPSQRTSD 142

Query: 143 SPPPPPHVPPVVLHEESGINFGVLPKGVRIPPSGPSKRFSDYPPPPP-HAPSVVLHEESK 202
            PPPPP    V+L+++S INFG+LPKGV IPPSGPS+R S+YPPPPP HA SV+L+ +SK
Sbjct: 143 YPPPPPRASSVILNKQSKINFGMLPKGVPIPPSGPSQRTSNYPPPPPLHASSVILNTQSK 202

Query: 203 IHFARYPRHAPIPPSAPSGR 219
           I+F   P+  PIPPS PS R
Sbjct: 203 INFGMLPKGVPIPPSGPSQR 222

BLAST of Lsi01G016990 vs. NCBI nr
Match: XP_031744042.1 (proline-rich receptor-like protein kinase PERK9 [Cucumis sativus])

HSP 1 Score: 188.7 bits (478), Expect = 5.3e-44
Identity = 112/208 (53.85%), Postives = 135/208 (64.90%), Query Frame = 0

Query: 11  FGACALVLLGLHITIYQADAKNNFIVDEGDSIVENELSGQNLKHQKTRIHFSLGKRKRVP 70
           F  C LVLLGL   +YQ +  N F V+E +S++ENE     + H K  I FS  K KR+P
Sbjct: 3   FRTCVLVLLGL---LYQTNGINLFEVNEENSVLENEFKAHVIIHPKQHIRFSRTKSKRIP 62

Query: 71  DLAPPFSLGILSNKERTPPSGPSQRTSDNTPPPPHASSIVLHKHSGISYGILPKGVRIPL 130
           D       GILS   R PPSGPSQR+SD+TPPP    SIVLHK S +++GILPKGV    
Sbjct: 63  DFDTHSGFGILSKAIRIPPSGPSQRSSDSTPPP----SIVLHKESMMNFGILPKGVPTHS 122

Query: 131 SAPSQRTSESPPPPPHVPPVVLHEESGINFGVLPKGVRIPPSGPSKRFSDYPPPPPHAPS 190
           S PSQR S+SPP PP  P +VLH+ES I FG+LPKGV    SGPS+RFSD PPPPP  PS
Sbjct: 123 SGPSQRFSDSPPSPP--PSIVLHKESRIKFGILPKGVPTHSSGPSRRFSDSPPPPP--PS 182

Query: 191 VVLHEESKIHFARYPRHAPIPPSAPSGR 219
           +VLH+ES+I+F    +      S PS R
Sbjct: 183 IVLHKESRINFGILSKGVRTHSSGPSRR 199

BLAST of Lsi01G016990 vs. NCBI nr
Match: KAA0043502.1 (proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK01137.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 186.8 bits (473), Expect = 2.0e-43
Identity = 106/192 (55.21%), Postives = 129/192 (67.19%), Query Frame = 0

Query: 1   MVSIGSSNVFFGACALVLLGLHITIYQADAKNNFIVDEGDSIVENELSGQNLKHQKTRIH 60
           M+SI SSN+ F  CA+VLLGLH  IYQ + +N F V E +S+ ENEL   ++ H K  IH
Sbjct: 1   MMSI-SSNMTFKTCAIVLLGLHFGIYQTNGRNLFEVKEDNSVFENELKANSIIHPKQYIH 60

Query: 61  FSLGKRKRVPDLAPPFSLGILSNKERTPPSGPSQRTSDNTPPPPHASSIVLHKHSGISYG 120
           FSL K K  P+    F  GI S   R PPSGPSQR+SD+ P P    S++L K S I++G
Sbjct: 61  FSLTKSKGKPEFDTHFRFGIFSKDVRIPPSGPSQRSSDSPPSP----SMILPKESRINFG 120

Query: 121 ILPKGVRIPLSAPSQRTSESPPPPPHVPPVVLHEESGINFGVLPKGVRIPPSGPSKRFSD 180
           ILPKG RIP S PSQR S+SP P    P   LH+ S + FG+LPKG  IPPSGPSKR SD
Sbjct: 121 ILPKGSRIPPSGPSQRFSDSPLP----PSTFLHKGSNMIFGMLPKGHHIPPSGPSKRTSD 180

Query: 181 YPPPPPHAPSVV 193
            PPPPPH+PS++
Sbjct: 181 NPPPPPHSPSLI 183

BLAST of Lsi01G016990 vs. TAIR 10
Match: AT1G26150.1 (proline-rich extensin-like receptor kinase 10 )

HSP 1 Score: 42.4 bits (98), Expect = 5.7e-04
Identity = 45/155 (29.03%), Postives = 59/155 (38.06%), Query Frame = 0

Query: 70  PDLAPPFSLGILSNKERTPPSGPSQRTSDNTPPPPHASSIVLHKHSGISYGILPKGVRIP 129
           P+ +PP  L   +     P S P   +S   PPP  A                      P
Sbjct: 96  PEPSPPPPLPTEAPPPANPVSSPPPESSPPPPPPTEAPPTT------------------P 155

Query: 130 LSAPSQRTSESPPPPPHVPPVVLHEESGINFGVLPKGVRIPPSG------PSKRFSDYPP 189
           +++PS  T  +PPPPP  PP +   +   N   LP    +PPS       PS   S+ PP
Sbjct: 156 ITSPSPPT--NPPPPPESPPSLPAPDPPSN--PLPPPKLVPPSHSPPRHLPSPPASEIPP 215

Query: 190 PPPHAPSVVLHEESKIHFARYPRHAPIPPSAPSGR 219
           PP H PS    E      +     +P PP  P  R
Sbjct: 216 PPRHLPSPPASERPSTPPSDSEHPSPPPPGHPKRR 228

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CGG12.5e-5260.00Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194... [more]
A0A5D3BP869.7e-4455.21Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194... [more]
A0A6J1HRH74.8e-4353.81actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3... [more]
A0A5A7T8R01.9e-3141.41Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BVE54.2e-3141.85Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
XP_038882352.12.3e-7170.83uncharacterized protein LOC120073615 [Benincasa hispida][more]
KAA0040932.15.3e-5260.00proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK1060... [more]
KAG6603169.18.1e-4554.00hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_031744042.15.3e-4453.85proline-rich receptor-like protein kinase PERK9 [Cucumis sativus][more]
KAA0043502.12.0e-4355.21proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK0113... [more]
Match NameE-valueIdentityDescription
AT1G26150.15.7e-0429.03proline-rich extensin-like receptor kinase 10 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..109
NoneNo IPR availablePANTHERPTHR33599:SF13FORMIN-LIKE PROTEIN 20coord: 75..219
IPR039639Protein IDA-likePANTHERPTHR33599PROTEIN IDA-LIKE 5coord: 75..219

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G016990.1Lsi01G016990.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010227 floral organ abscission