Lsi01G016970 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi01G016970
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Descriptionactin cytoskeleton-regulatory complex protein PAN1-like
Locationchr01: 15622803 .. 15623837 (-)
RNA-Seq ExpressionLsi01G016970
SyntenyLsi01G016970
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTCAATTGGTTCTTCTAATGTCTTTTTTGGAGCTTGTGCTCTCCTACTCCTTGGGTTGCACATTACAACCTATCAAGCAGATGCCAAAAATATTTTTGTAGTCGACGAAGGCGACTCTATTGTAGGAAACGAATTGAGTGACCAAAATATAAAGCATCCAAAACCACACATGCATTTCTCTCTAGGAAAACCCAACAGAGTACCTGGCTTAGCTCTACCTTTCAGCTTGGGAATACTATCGAATGAAGAACGCACTCCTCCGTCTGGACTGAGTAAAGGAACTTCAGACAATCCACCTCCCCCACCGCATGTCCCATCCTTTGTTTTACACAAGGAATCTGGGATCAACTTCGGAGTATTACCAAAAGGAGTGCGTATTCCTCCGTCTGGGCCGAGTCAAAGAACTTCTGACACTCCACCTCCCCCACCGCATGTCCCATCCGTCGTCTTACACCAGCAATCTGGGATCAACTTCGGAGTATTACCAAAAGGAGTGCGTATTCCTCCATCTGGGCCGAGTCAAAGAACTTCTGACACTCCACCTCCCCCACCGCATGTCCCATCCGTCGTCTTACACCAGCAATCTGGGATCAACTTCGGAGTATTACCAAAAGGAGTGCGTATTCCTCCGTCTGAGCCGAGTCAAAGAACTTCTGACACTCCACCTCCCCCACCGCATGTCCCATCCGTCGTCTTACACAAGGAATCTGGGATCAACTTCGGAGTATTACCAAAAGGAGTGCGTATTCCTCCGTCTGGGCCGAGTCAAAAAACTTCTGAAAGTCCACCACCCCCACCGCATGTCCCATCCTTTGTTTTACACAAGGAATCTGGGATCAACTTCGGAGTATTACCAAAAGGAGTGCGTATTCCTCCGTCTGGGCCGTGTCAAAGATTTTCGGCCTATCCACCTCCTCCACCGCATGCTCCTTCCGTTGTTTTACATAAAAAATCTAAGATTCATTTTGTGAGGTATCCTAGAAATACACCTATTCCACCATCTGCTCCAAGCGGACGGGTACCATTATGA

mRNA sequence

ATGGTGTCAATTGGTTCTTCTAATGTCTTTTTTGGAGCTTGTGCTCTCCTACTCCTTGGGTTGCACATTACAACCTATCAAGCAGATGCCAAAAATATTTTTGTAGTCGACGAAGGCGACTCTATTGTAGGAAACGAATTGAGTGACCAAAATATAAAGCATCCAAAACCACACATGCATTTCTCTCTAGGAAAACCCAACAGAGTACCTGGCTTAGCTCTACCTTTCAGCTTGGGAATACTATCGAATGAAGAACGCACTCCTCCGTCTGGACTGAGTAAAGGAACTTCAGACAATCCACCTCCCCCACCGCATGTCCCATCCTTTGTTTTACACAAGGAATCTGGGATCAACTTCGGAGTATTACCAAAAGGAGTGCGTATTCCTCCGTCTGGGCCGAGTCAAAGAACTTCTGACACTCCACCTCCCCCACCGCATGTCCCATCCGTCGTCTTACACCAGCAATCTGGGATCAACTTCGGAGTATTACCAAAAGGAGTGCGTATTCCTCCATCTGGGCCGAGTCAAAGAACTTCTGACACTCCACCTCCCCCACCGCATGTCCCATCCGTCGTCTTACACCAGCAATCTGGGATCAACTTCGGAGTATTACCAAAAGGAGTGCGTATTCCTCCGTCTGAGCCGAGTCAAAGAACTTCTGACACTCCACCTCCCCCACCGCATGTCCCATCCGTCGTCTTACACAAGGAATCTGGGATCAACTTCGGAGTATTACCAAAAGGAGTGCGTATTCCTCCGTCTGGGCCGAGTCAAAAAACTTCTGAAAGTCCACCACCCCCACCGCATGTCCCATCCTTTGTTTTACACAAGGAATCTGGGATCAACTTCGGAGTATTACCAAAAGGAGTGCGTATTCCTCCGTCTGGGCCGTGTCAAAGATTTTCGGCCTATCCACCTCCTCCACCGCATGCTCCTTCCGTTGTTTTACATAAAAAATCTAAGATTCATTTTGTGAGGTATCCTAGAAATACACCTATTCCACCATCTGCTCCAAGCGGACGGGTACCATTATGA

Coding sequence (CDS)

ATGGTGTCAATTGGTTCTTCTAATGTCTTTTTTGGAGCTTGTGCTCTCCTACTCCTTGGGTTGCACATTACAACCTATCAAGCAGATGCCAAAAATATTTTTGTAGTCGACGAAGGCGACTCTATTGTAGGAAACGAATTGAGTGACCAAAATATAAAGCATCCAAAACCACACATGCATTTCTCTCTAGGAAAACCCAACAGAGTACCTGGCTTAGCTCTACCTTTCAGCTTGGGAATACTATCGAATGAAGAACGCACTCCTCCGTCTGGACTGAGTAAAGGAACTTCAGACAATCCACCTCCCCCACCGCATGTCCCATCCTTTGTTTTACACAAGGAATCTGGGATCAACTTCGGAGTATTACCAAAAGGAGTGCGTATTCCTCCGTCTGGGCCGAGTCAAAGAACTTCTGACACTCCACCTCCCCCACCGCATGTCCCATCCGTCGTCTTACACCAGCAATCTGGGATCAACTTCGGAGTATTACCAAAAGGAGTGCGTATTCCTCCATCTGGGCCGAGTCAAAGAACTTCTGACACTCCACCTCCCCCACCGCATGTCCCATCCGTCGTCTTACACCAGCAATCTGGGATCAACTTCGGAGTATTACCAAAAGGAGTGCGTATTCCTCCGTCTGAGCCGAGTCAAAGAACTTCTGACACTCCACCTCCCCCACCGCATGTCCCATCCGTCGTCTTACACAAGGAATCTGGGATCAACTTCGGAGTATTACCAAAAGGAGTGCGTATTCCTCCGTCTGGGCCGAGTCAAAAAACTTCTGAAAGTCCACCACCCCCACCGCATGTCCCATCCTTTGTTTTACACAAGGAATCTGGGATCAACTTCGGAGTATTACCAAAAGGAGTGCGTATTCCTCCGTCTGGGCCGTGTCAAAGATTTTCGGCCTATCCACCTCCTCCACCGCATGCTCCTTCCGTTGTTTTACATAAAAAATCTAAGATTCATTTTGTGAGGTATCCTAGAAATACACCTATTCCACCATCTGCTCCAAGCGGACGGGTACCATTATGA

Protein sequence

MVSIGSSNVFFGACALLLLGLHITTYQADAKNIFVVDEGDSIVGNELSDQNIKHPKPHMHFSLGKPNRVPGLALPFSLGILSNEERTPPSGLSKGTSDNPPPPPHVPSFVLHKESGINFGVLPKGVRIPPSGPSQRTSDTPPPPPHVPSVVLHQQSGINFGVLPKGVRIPPSGPSQRTSDTPPPPPHVPSVVLHQQSGINFGVLPKGVRIPPSEPSQRTSDTPPPPPHVPSVVLHKESGINFGVLPKGVRIPPSGPSQKTSESPPPPPHVPSFVLHKESGINFGVLPKGVRIPPSGPCQRFSAYPPPPPHAPSVVLHKKSKIHFVRYPRNTPIPPSAPSGRVPL
Homology
BLAST of Lsi01G016970 vs. ExPASy Swiss-Prot
Match: Q84ZL0 (Formin-like protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=FH5 PE=2 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 2.4e-06
Identity = 91/294 (30.95%), Postives = 102/294 (34.69%), Query Frame = 0

Query: 88   PPSGLSKGTSDNPPPPPHVPSFVLHKESGINFGVLPKGVRIPPSGPSQRTSDTPPPPP-- 147
            PP   S G S  PPPPP  P      ++       P     P SG    T   PPPPP  
Sbjct: 866  PPPPASSGLSSIPPPPPPPPLMSFGAQTRTFVPPPPPPPPPPRSGVGGNTPPAPPPPPLR 925

Query: 148  -HVPSV---------VLHQQSGINF--GVLPKGVRIPPSGPSQRT-SDTPPPPPHVPSVV 207
              VP++          L   SG        P     PPS PS R  S  PPPPP  P   
Sbjct: 926  STVPAISPPPPPPPPPLKPSSGAPCPPPPPPPPPPPPPSAPSSRAFSSAPPPPPPPP--- 985

Query: 208  LHQQSGINFGVLPKGVRIPPSEPSQRTSDTPPPPPHVPSVVLH--------KESGINFGV 267
                       L + V  PP  P    S+ PPPPP +P+   +          +  N   
Sbjct: 986  -----------LLRSVPPPPPPPPISHSNAPPPPP-LPAARFNAPPPPPPPPTTHFNAPP 1045

Query: 268  LPKGVRIPPSG--PSQKTSESPPPPPHVPSFVLHKESGINFGVLPKGVR----IPPSGPC 327
             P    I  SG  PS     SPPPPP  P        G      P G R     PP  P 
Sbjct: 1046 PPPPPPITRSGAPPSPPPPPSPPPPPPPPG----ARPGPPPPPPPPGARPGPPPPPPPPG 1105

Query: 328  QRFSAYP----------PPPPHAPSVVLHKKSKIHFVRYPRNTPIPPSAPSGRV 343
             R SA P          PPPP  PS  L               P PP AP GR+
Sbjct: 1106 GRPSAPPLPPPGGRASAPPPPPPPSTRLGAPPPPPPPGAGGRAPPPPPAPGGRL 1140

BLAST of Lsi01G016970 vs. ExPASy Swiss-Prot
Match: Q9C6S1 (Formin-like protein 14 OS=Arabidopsis thaliana OX=3702 GN=FH14 PE=3 SV=3)

HSP 1 Score: 50.8 bits (120), Expect = 3.5e-05
Identity = 85/286 (29.72%), Postives = 95/286 (33.22%), Query Frame = 0

Query: 90  SGLSKGTSDNPPPPPHVPSFVLHKESGINFGVLPKGVRIPPSGPSQRTSDT------PPP 149
           S  S   S  PPPPP  P F+    S  +F   P     PP  P   TS T      PPP
Sbjct: 517 STTSFSPSQPPPPPPPPPLFM----STTSFS--PSQPPPPPPPPPLFTSTTSFSPSQPPP 576

Query: 150 PPHVPS-------VVLHQQSGINFGVLPKGVRIPP----SGPSQRTSDTPPPPPHVPSVV 209
           PP +PS         LHQ   IN    P     PP    S P       PP PP  P   
Sbjct: 577 PPPLPSFSNRDPLTTLHQP--INKTPPPPPPPPPPLPSRSIPPPLAQPPPPRPPPPPPPP 636

Query: 210 LHQQSGINFGVLPKGVRIPPSEPS---QRTSDTPPPPPHVPSVVLHKESGINFGVLPKGV 269
              +S  +    P     PPS  S   +R +  PPPPP  P              +P   
Sbjct: 637 PSSRSIPSPSAPPPPPPPPPSFGSTGNKRQAQPPPPPPPPPPT-----------RIPAAK 696

Query: 270 RIPPSGPSQKTSES-----------PPPPPHVPSFVLHKESGINFGVLPKGVRIPPSGPC 329
             PP  P   TS S           PPPPP  P          N    PK    PP  P 
Sbjct: 697 CAPPPPPPPPTSHSGSIRVGPPSTPPPPPPPPPK--------ANISNAPKPPAPPPLPPS 756

Query: 330 QRFSAYPPPPPHAPSVVLHKKSKIHFVRYPRNTPIPPSAPSGRVPL 345
                 PPPPP  P                  TP PP  P  + P+
Sbjct: 757 STRLGAPPPPPPPPL---------------SKTPAPPPPPLSKTPV 760

BLAST of Lsi01G016970 vs. ExPASy Swiss-Prot
Match: Q9SN46 (Leucine-rich repeat extensin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=LRX5 PE=2 SV=2)

HSP 1 Score: 48.5 bits (114), Expect = 1.7e-04
Identity = 84/279 (30.11%), Postives = 107/279 (38.35%), Query Frame = 0

Query: 80  ILSNEERTP-PSGLSKGTSDNPPPPPHVPSFVLHKESGINFGVLPKGVRIPPSGPSQRTS 139
           ++ +   TP P G     S +P PP  VPS      +  + G  P    I PS PS  T+
Sbjct: 409 VVPSPPTTPSPGGSPPSPSISPSPPITVPS----PPTTPSPGGSPPSPSIVPSPPS--TT 468

Query: 140 DTPPPPPHVPSVVLHQQSGINFGVLPKGVRIPPSGPSQRT-SDTPPPPPHVPSVVLHQQS 199
            +P  PP  P+      S  +    P     PPS P+  T   +PP  P  PS      S
Sbjct: 469 PSPGSPPTSPTTPTPGGSPPSSPTTPTPGGSPPSSPTTPTPGGSPPSSPTTPSPGGSPPS 528

Query: 200 GINFGVLPKGVRIPPS---------EPSQRTSDTPPPPPHVPSVVLHKESGINFGV-LPK 259
                  P  V  PPS          PS  T  +P P P  PS      + I+ G   P 
Sbjct: 529 PSISPSPPITVPSPPSTPTSPGSPPSPSSPTPSSPIPSPPTPST---PPTPISPGQNSPP 588

Query: 260 GVRIPP-SGPSQKTSESPPPPPHVPSFVLHKESGINFGVLPKGVRIPPSGPCQRFS---- 319
            +  PP +GPS  +S SPP PP +PS  +         V P     PPS P   +S    
Sbjct: 589 IIPSPPFTGPSPPSSPSPPLPPVIPSPPI---------VGPTPSSPPPSTPTPVYSPPPP 648

Query: 320 --AYPPPPPHAPSVVLHKKSKIHFVRYPRNTPIPPSAPS 340
              YPPPPP              F  Y   +P PP  P+
Sbjct: 649 STGYPPPPP--------------FTGYSPPSPPPPPPPT 655

BLAST of Lsi01G016970 vs. ExPASy TrEMBL
Match: A0A6J1HRH7 (actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3661 GN=LOC111467141 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 1.8e-84
Identity = 182/321 (56.70%), Postives = 215/321 (66.98%), Query Frame = 0

Query: 26  YQADAKNIFVVDEGDSIVGNELSDQNIKHPKPHMHFSLGKP-----NRVPGLALPFSLGI 85
           Y+ DAKN+  VD  D+I   EL+D  +++PK     S         +R P  +L F  G+
Sbjct: 186 YETDAKNVVEVDVDDNIREAELTDLIVQNPKGISISSSRSSQRTLFHRTPSPSLVF--GM 245

Query: 86  LSNEERTPPSGLSKGTSDNPPPPPHVPSFVLHKESGINFGVLPKGVRIPPSGPSQRTSDT 145
           L      PPS  S+ TSD PPPPP   S +L+K S IN G+LP+GV IPPSGPSQRTSD 
Sbjct: 246 LPKGVPIPPSRPSQRTSDYPPPPPRASSIILNKHSKINLGMLPRGVPIPPSGPSQRTSDY 305

Query: 146 PPPPPHVPSVVLHQQSGINFGVLPKGVRIPPSGPSQRTSDTPPPPPHVPSVVLHQQSGIN 205
           PPPPPH  SV+L++QS INFG+LPKGV IPPSGPSQRTS  PPPPP   SV+L++QS I 
Sbjct: 306 PPPPPHASSVILNKQSKINFGMLPKGVPIPPSGPSQRTSXYPPPPPRASSVILNKQSKIY 365

Query: 206 FGVLPKGVRIPPSEPSQRTSDTPPPPPHVPSVVLHKESGINFGVLPKGVRIPPSGPSQKT 265
            G+LP+GV IPP   SQRTSD P PPPH  SV+L+K+S INFG+LPKGV IPPSGPS +T
Sbjct: 366 LGMLPRGVPIPPPGLSQRTSDYPHPPPHASSVILNKQSKINFGMLPKGVPIPPSGPSHRT 425

Query: 266 SESPPPPPHVPSFVLHKESGINFGVLPKGVRIPPSGPCQRFSAYPPPPPHAPSVVLHKKS 325
           S+ PPPPPHV          INFG+LPK V IPPSGP QR S YPPPPPH          
Sbjct: 426 SDYPPPPPHV------LWPKINFGMLPKDVPIPPSGPSQRTSDYPPPPPHV------LWP 485

Query: 326 KIHFVRYPRNTPIPPSAPSGR 342
           KI+F   P+  PIPP  PS R
Sbjct: 486 KINFGMLPKGVPIPPHGPSRR 492

BLAST of Lsi01G016970 vs. ExPASy TrEMBL
Match: A0A5D3CGG1 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G00020 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 4.7e-53
Identity = 118/195 (60.51%), Postives = 142/195 (72.82%), Query Frame = 0

Query: 1   MVSIGSSNVFFGACALLLLGLHITTYQADAKNIFVVDEGDSIVGNELSDQNIKHPKPHMH 60
           MVS+G +N+FF ACAL+ LGLH   Y  +AK  FVVDE +S + N L    I HPK   H
Sbjct: 1   MVSVG-TNIFFRACALIFLGLHFEIYLTNAKRSFVVDEDNSSLENVLRGDIINHPKKVAH 60

Query: 61  FSLGKPNRVPGLALPFSLGILSNEERTPPSGLSKGTSDNPPPPPHVPSFVLHKESGINFG 120
           FS  KP ++P LA PFSLGILS   RTPPSGLS+GTS+N PP PHV   +LHKES +NFG
Sbjct: 61  FSWPKPKKIPDLAPPFSLGILSKGIRTPPSGLSQGTSNN-PPSPHVAPIILHKESMVNFG 120

Query: 121 VLPKGVRIPPSGPSQRTSDTPPPPPHVPSVVLHQQSGINFGVLPKGVRIPPSGPSQRTSD 180
           +LPKGVRIPPSGPS+RTSD PPP  +  S+   ++S I +G+LPKGVRIPPSGPS+R SD
Sbjct: 121 ILPKGVRIPPSGPSRRTSDPPPPLSNFHSI---KESRIKYGILPKGVRIPPSGPSKRNSD 180

Query: 181 TPPPPP---HVPSVV 193
             PPPP   H PS++
Sbjct: 181 YYPPPPMHLHAPSII 190

BLAST of Lsi01G016970 vs. ExPASy TrEMBL
Match: A0A5D3BP86 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold109G00050 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 9.4e-46
Identity = 106/192 (55.21%), Postives = 131/192 (68.23%), Query Frame = 0

Query: 1   MVSIGSSNVFFGACALLLLGLHITTYQADAKNIFVVDEGDSIVGNELSDQNIKHPKPHMH 60
           M+SI SSN+ F  CA++LLGLH   YQ + +N+F V E +S+  NEL   +I HPK ++H
Sbjct: 1   MMSI-SSNMTFKTCAIVLLGLHFGIYQTNGRNLFEVKEDNSVFENELKANSIIHPKQYIH 60

Query: 61  FSLGKPNRVPGLALPFSLGILSNEERTPPSGLSKGTSDNPPPPPHVPSFVLHKESGINFG 120
           FSL K    P     F  GI S + R PPSG S+ +SD+PP     PS +L KES INFG
Sbjct: 61  FSLTKSKGKPEFDTHFRFGIFSKDVRIPPSGPSQRSSDSPPS----PSMILPKESRINFG 120

Query: 121 VLPKGVRIPPSGPSQRTSDTPPPPPHVPSVVLHQQSGINFGVLPKGVRIPPSGPSQRTSD 180
           +LPKG RIPPSGPSQR SD+P P    PS  LH+ S + FG+LPKG  IPPSGPS+RTSD
Sbjct: 121 ILPKGSRIPPSGPSQRFSDSPLP----PSTFLHKGSNMIFGMLPKGHHIPPSGPSKRTSD 180

Query: 181 TPPPPPHVPSVV 193
            PPPPPH PS++
Sbjct: 181 NPPPPPHSPSLI 183

BLAST of Lsi01G016970 vs. ExPASy TrEMBL
Match: A0A6P5RDM4 (formin-like protein 5 OS=Prunus avium OX=42229 GN=LOC110745147 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 2.7e-45
Identity = 133/278 (47.84%), Postives = 139/278 (50.00%), Query Frame = 0

Query: 64  GKPNRVPGLALPFSLGILSNEERTPPSGLSKGTSDNPPPPPHVPSFVLHKESGINFGVLP 123
           G PN   G +  F+ G L      PPS  SK TS  PPPPPH PS         NFG LP
Sbjct: 51  GPPN--TGTSRKFNFGTLPKGTLIPPSWPSKRTSRPPPPPPH-PS---------NFGTLP 110

Query: 124 KGVRIPPSGPSQRTSDTPPPPPHVPSVVLHQQSGINFGVLPKGVRIPPSGPSQRTSDTPP 183
           K   IPPSGPS RTSD PPPP              NFG LPK   IPPSGPS RTSD PP
Sbjct: 111 KYTPIPPSGPSGRTSDPPPPP-------------FNFGTLPKYTPIPPSGPSGRTSDPPP 170

Query: 184 PPPHVPSVVLHQQSGINFGVLPKGVRIPPSEPSQRTSDTPPPPPHVPSVVLHKESGINFG 243
           PP              NFG LPK   IPPS PS RTSD PPPP              NFG
Sbjct: 171 PP-------------FNFGTLPKYTPIPPSGPSGRTSDPPPPP-------------FNFG 230

Query: 244 VLPKGVRIPPSGPSQKTSESPPPPPHVPSFVLHKESGINFGVLPKGVRIPPSGPCQRFSA 303
            LPK   IPPSGPS +TS+ PPPP              NFG LPK   IPPSGP  R S 
Sbjct: 231 TLPKYTPIPPSGPSGRTSDPPPPP-------------FNFGTLPKYTPIPPSGPSGRTSD 251

Query: 304 YPPPPPHAPSVVLHKKSKIHFVRYPRNTPIPPSAPSGR 342
            PPPP              +F   P+ TPIPPS PSGR
Sbjct: 291 PPPPP-------------FNFGTLPKYTPIPPSGPSGR 251

BLAST of Lsi01G016970 vs. ExPASy TrEMBL
Match: A0A6P5RC98 (formin-like protein 5 OS=Prunus avium OX=42229 GN=LOC110744709 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.0e-44
Identity = 130/272 (47.79%), Postives = 135/272 (49.63%), Query Frame = 0

Query: 70  PGLALPFSLGILSNEERTPPSGLSKGTSDNPPPPPHVPSFVLHKESGINFGVLPKGVRIP 129
           P     F+ G L      PPS  SK TS  PPPPPH PS         NFG LPK   IP
Sbjct: 14  PDSTRKFNFGTLPKGTLIPPSWPSKRTSRPPPPPPH-PS---------NFGTLPKYTPIP 73

Query: 130 PSGPSQRTSDTPPPPPHVPSVVLHQQSGINFGVLPKGVRIPPSGPSQRTSDTPPPPPHVP 189
           PSGPS RTSD PPPP              NFG LPK   IPPSGPS RTSD PPPP    
Sbjct: 74  PSGPSGRTSDPPPPP-------------FNFGTLPKYTPIPPSGPSGRTSDPPPPP---- 133

Query: 190 SVVLHQQSGINFGVLPKGVRIPPSEPSQRTSDTPPPPPHVPSVVLHKESGINFGVLPKGV 249
                     NFG LPK   IPPS PS RTSD PPPP              NFG LPK  
Sbjct: 134 ---------FNFGTLPKYTPIPPSGPSGRTSDPPPPP-------------FNFGTLPKYT 193

Query: 250 RIPPSGPSQKTSESPPPPPHVPSFVLHKESGINFGVLPKGVRIPPSGPCQRFSAYPPPPP 309
            IPPSGPS +TS+ PPPP              NFG LPK   IPPSGP  R S  PPPP 
Sbjct: 194 PIPPSGPSGRTSDPPPPP-------------FNFGTLPKYTPIPPSGPSGRTSDPPPPP- 210

Query: 310 HAPSVVLHKKSKIHFVRYPRNTPIPPSAPSGR 342
                        +F   P+ TPIPPS PSGR
Sbjct: 254 ------------FNFGTLPKYTPIPPSGPSGR 210

BLAST of Lsi01G016970 vs. NCBI nr
Match: KAG6603169.1 (hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 357.5 bits (916), Expect = 1.3e-94
Identity = 193/324 (59.57%), Postives = 229/324 (70.68%), Query Frame = 0

Query: 23  ITTYQADAKNIFVVDEGDSIVGNELSDQNIKHPKPHMHFSLGKPNRVPGLAL----PFSL 82
           +  Y+ DAK +  VD  D+I   EL+DQ +KHPK  +  S  + ++     L    P  L
Sbjct: 23  VQVYETDAKKVVEVDVYDTIREEELTDQMVKHPK-GISISSSRSSQRTLFHLTPPPPVVL 82

Query: 83  GILSNEERTPPSGLSKGTSDNPPPPPHVPSFVLHKESGINFGVLPKGVRIPPSGPSQRTS 142
            +L       PSG S+ TSD PPPPP   S +L K+S INFG+LPKGV IPPSGPSQRTS
Sbjct: 83  RMLPKGVPISPSGPSQRTSDYPPPPPRASSVILSKQSKINFGMLPKGVPIPPSGPSQRTS 142

Query: 143 DTPPPPPHVPSVVLHQQSGINFGVLPKGVRIPPSGPSQRTSDTPPPPP-HVPSVVLHQQS 202
           D PPPPP   SV+L++QS INFG+LPKGV IPPSGPSQRTS+ PPPPP H  SV+L+ QS
Sbjct: 143 DYPPPPPRASSVILNKQSKINFGMLPKGVPIPPSGPSQRTSNYPPPPPLHASSVILNTQS 202

Query: 203 GINFGVLPKGVRIPPSEPSQRTSDTPPPPPHVPSVVLHKESGINFGVLPKGVRIPPSGPS 262
            INFG+LPKGV IPPS PSQRTSD PPPPPH  S +L+ +S INFG+LPKGV IPPSGPS
Sbjct: 203 KINFGMLPKGVPIPPSGPSQRTSDYPPPPPHASSFILNTQSKINFGMLPKGVPIPPSGPS 262

Query: 263 QKTSESPPPPPHVPSFVLHKESGINFGVLPKGVRIPPSGPCQRFSAYPPPPPHAPSVVLH 322
           Q+TS+ PPPPPH  S +L+ +S INFG+LPKGV IPPSGP QR S YPPPPPH       
Sbjct: 263 QRTSDYPPPPPHASSVILNTQSKINFGMLPKGVPIPPSGPSQRTSNYPPPPPHV------ 322

Query: 323 KKSKIHFVRYPRNTPIPPSAPSGR 342
            + KI+F   P+  PIPPS PS R
Sbjct: 323 LRPKINFGMLPKGVPIPPSGPSRR 339

BLAST of Lsi01G016970 vs. NCBI nr
Match: XP_031744042.1 (proline-rich receptor-like protein kinase PERK9 [Cucumis sativus])

HSP 1 Score: 332.4 bits (851), Expect = 4.6e-87
Identity = 190/331 (57.40%), Postives = 230/331 (69.49%), Query Frame = 0

Query: 11  FGACALLLLGLHITTYQADAKNIFVVDEGDSIVGNELSDQNIKHPKPHMHFSLGKPNRVP 70
           F  C L+LLGL    YQ +  N+F V+E +S++ NE     I HPK H+ FS  K  R+P
Sbjct: 3   FRTCVLVLLGL---LYQTNGINLFEVNEENSVLENEFKAHVIIHPKQHIRFSRTKSKRIP 62

Query: 71  GLALPFSLGILSNEERTPPSGLSKGTSDNPPPPPHVPSFVLHKESGINFGVLPKGVRIPP 130
                   GILS   R PPSG S+ +SD+ PP    PS VLHKES +NFG+LPKGV    
Sbjct: 63  DFDTHSGFGILSKAIRIPPSGPSQRSSDSTPP----PSIVLHKESMMNFGILPKGVPTHS 122

Query: 131 SGPSQRTSDTPPPPPHVPSVVLHQQSGINFGVLPKGVRIPPSGPSQRTSDTPPPPPHVPS 190
           SGPSQR SD+PP PP  PS+VLH++S I FG+LPKGV    SGPS+R SD+PPPPP  PS
Sbjct: 123 SGPSQRFSDSPPSPP--PSIVLHKESRIKFGILPKGVPTHSSGPSRRFSDSPPPPP--PS 182

Query: 191 VVLHQQSGINFGVLPKGVRIPPSEPSQRTSDTPPPPPHVPSVVLHKESGINFGVLPKGVR 250
           +VLH++S INFG+L KGVR   S PS+R SD+PPPPP  PS+VLHKES +NFG+LPKGV 
Sbjct: 183 IVLHKESRINFGILSKGVRTHSSGPSRRFSDSPPPPP--PSIVLHKESRMNFGILPKGVP 242

Query: 251 IPPSGPSQKTSESPPPPPHVPSFVLHKESGINFGVLPKGVRIPPSGPCQRFSAYPPPPPH 310
              SGPS++ S+SPP PP  PS VLHK+SGI+FG+L +GV I  SGP +RFS  PPPPP 
Sbjct: 243 THSSGPSRRFSDSPPLPP--PSIVLHKKSGISFGILSEGVHILSSGPSERFSDSPPPPP- 302

Query: 311 APSVVLHKKSKIHFVRYPRNTPIPPSAPSGR 342
            PS+VLHKKS I F   P+   IPPS PS R
Sbjct: 303 -PSIVLHKKSGISFGILPKGVRIPPSGPSPR 316

BLAST of Lsi01G016970 vs. NCBI nr
Match: XP_022967687.1 (actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima])

HSP 1 Score: 322.8 bits (826), Expect = 3.6e-84
Identity = 182/321 (56.70%), Postives = 215/321 (66.98%), Query Frame = 0

Query: 26  YQADAKNIFVVDEGDSIVGNELSDQNIKHPKPHMHFSLGKP-----NRVPGLALPFSLGI 85
           Y+ DAKN+  VD  D+I   EL+D  +++PK     S         +R P  +L F  G+
Sbjct: 186 YETDAKNVVEVDVDDNIREAELTDLIVQNPKGISISSSRSSQRTLFHRTPSPSLVF--GM 245

Query: 86  LSNEERTPPSGLSKGTSDNPPPPPHVPSFVLHKESGINFGVLPKGVRIPPSGPSQRTSDT 145
           L      PPS  S+ TSD PPPPP   S +L+K S IN G+LP+GV IPPSGPSQRTSD 
Sbjct: 246 LPKGVPIPPSRPSQRTSDYPPPPPRASSIILNKHSKINLGMLPRGVPIPPSGPSQRTSDY 305

Query: 146 PPPPPHVPSVVLHQQSGINFGVLPKGVRIPPSGPSQRTSDTPPPPPHVPSVVLHQQSGIN 205
           PPPPPH  SV+L++QS INFG+LPKGV IPPSGPSQRTS  PPPPP   SV+L++QS I 
Sbjct: 306 PPPPPHASSVILNKQSKINFGMLPKGVPIPPSGPSQRTSXYPPPPPRASSVILNKQSKIY 365

Query: 206 FGVLPKGVRIPPSEPSQRTSDTPPPPPHVPSVVLHKESGINFGVLPKGVRIPPSGPSQKT 265
            G+LP+GV IPP   SQRTSD P PPPH  SV+L+K+S INFG+LPKGV IPPSGPS +T
Sbjct: 366 LGMLPRGVPIPPPGLSQRTSDYPHPPPHASSVILNKQSKINFGMLPKGVPIPPSGPSHRT 425

Query: 266 SESPPPPPHVPSFVLHKESGINFGVLPKGVRIPPSGPCQRFSAYPPPPPHAPSVVLHKKS 325
           S+ PPPPPHV          INFG+LPK V IPPSGP QR S YPPPPPH          
Sbjct: 426 SDYPPPPPHV------LWPKINFGMLPKDVPIPPSGPSQRTSDYPPPPPHV------LWP 485

Query: 326 KIHFVRYPRNTPIPPSAPSGR 342
           KI+F   P+  PIPP  PS R
Sbjct: 486 KINFGMLPKGVPIPPHGPSRR 492

BLAST of Lsi01G016970 vs. NCBI nr
Match: XP_031744003.1 (abl interactor homolog [Cucumis sativus])

HSP 1 Score: 306.6 bits (784), Expect = 2.7e-79
Identity = 174/307 (56.68%), Postives = 214/307 (69.71%), Query Frame = 0

Query: 11  FGACALLLLGLHITTYQADAKNIFVVDEGDSIVGNELSDQNIKHPKPHMHFSLGKPNRVP 70
           F  C L+LLGL    YQ +  N+F V+E +S+  NE     I HPK H+ FS  K  R+P
Sbjct: 3   FRTCVLVLLGL---LYQTNGINLFEVNEDNSVFENEFKAHVIIHPKQHIRFSRTKSKRIP 62

Query: 71  GLALPFSLGILSNEERTPPSGLSKGTSDNPPPPPHVPSFVLHKESGINFGVLPKGVRIPP 130
                   GILS + R PP G S+ +SD+ PP    PS VLHKES +NFG+L KGVR   
Sbjct: 63  DFDTHSGFGILSKDIRIPPFGPSQRSSDSTPP----PSIVLHKESRMNFGILLKGVRTHS 122

Query: 131 SGPSQRTSDTPPPPPHVPSVVLHQQSGINFGVLPKGVRIPPSGPSQRTSDTPPPPPHVPS 190
           SG SQR SD+PP PP  PS+VLH++  I FG+LPKGV    SGPS+R SD+PPPPP  PS
Sbjct: 123 SGSSQRFSDSPPSPP--PSIVLHKEPRIKFGILPKGVPTHSSGPSRRFSDSPPPPP--PS 182

Query: 191 VVLHQQSGINFGVLPKGVRIPPSEPSQRTSDTPPPPPHVPSVVLHKESGINFGVLPKGVR 250
           +VLH++S +NFG+LPKGV    S PS+R SD+PP PP  PS+VLHK+SGI+FG+L KGV 
Sbjct: 183 IVLHKESRMNFGILPKGVSTHSSGPSRRFSDSPPLPP--PSIVLHKKSGISFGILSKGVH 242

Query: 251 IPPSGPSQKTSESPPPPPHVPSFVLHKESGINFGVLPKGVRIPPSGPCQRFSAYPPPPPH 310
           I  SGPS++ S+SPPPPP  PS VLHK+SGI+FG+LPKGVRIPPSGP  RF+     PP 
Sbjct: 243 ILSSGPSERFSDSPPPPP--PSIVLHKKSGISFGILPKGVRIPPSGPSPRFA---DSPPS 291

Query: 311 APSVVLH 318
            PS+VLH
Sbjct: 303 NPSIVLH 291

BLAST of Lsi01G016970 vs. NCBI nr
Match: XP_038882352.1 (uncharacterized protein LOC120073615 [Benincasa hispida])

HSP 1 Score: 285.4 bits (729), Expect = 6.4e-73
Identity = 138/192 (71.88%), Postives = 159/192 (82.81%), Query Frame = 0

Query: 1   MVSIGSSNVFFGACALLLLGLHITTYQADAKNIFVVDEGDSIVGNELSDQNIKHPKPHMH 60
           MVSI  SNVFFGACA + LGLH T YQ DAKN+FVV++GDS + NELSD+NIKHPK H+H
Sbjct: 1   MVSISYSNVFFGACAFIFLGLHSTIYQTDAKNVFVVEKGDSTIENELSDENIKHPKRHIH 60

Query: 61  FSLGKPNRVPGLALPFSLGILSNEERTPPSGLSKGTSDNPPPPPHVPSFVLHKESGINFG 120
           FSLGK  R+P LA PF+LGILS EER PPSGLS+ TSDNPPPPPHV S +LHKES INF 
Sbjct: 61  FSLGKYKRIPDLAPPFNLGILSKEERVPPSGLSQSTSDNPPPPPHVISIILHKESRINFR 120

Query: 121 VLPKGVRIPPSGPSQRTSDTPPPPPHVPSVVLHQQSGINFGVLPKGVRIPPSGPSQRTSD 180
           VL KG RIPPSGPSQRTS++PPPPPH  SV+LH++ GINFG+LPK + IPPSGPS+R S+
Sbjct: 121 VLSKGNRIPPSGPSQRTSESPPPPPHALSVILHKKPGINFGILPKSMHIPPSGPSKRFSN 180

Query: 181 TPPPPPHVPSVV 193
            P PP H PSV+
Sbjct: 181 YPSPPTHAPSVI 192

BLAST of Lsi01G016970 vs. TAIR 10
Match: AT1G31810.1 (Formin Homology 14 )

HSP 1 Score: 50.8 bits (120), Expect = 2.5e-06
Identity = 85/286 (29.72%), Postives = 95/286 (33.22%), Query Frame = 0

Query: 90  SGLSKGTSDNPPPPPHVPSFVLHKESGINFGVLPKGVRIPPSGPSQRTSDT------PPP 149
           S  S   S  PPPPP  P F+    S  +F   P     PP  P   TS T      PPP
Sbjct: 517 STTSFSPSQPPPPPPPPPLFM----STTSFS--PSQPPPPPPPPPLFTSTTSFSPSQPPP 576

Query: 150 PPHVPS-------VVLHQQSGINFGVLPKGVRIPP----SGPSQRTSDTPPPPPHVPSVV 209
           PP +PS         LHQ   IN    P     PP    S P       PP PP  P   
Sbjct: 577 PPPLPSFSNRDPLTTLHQP--INKTPPPPPPPPPPLPSRSIPPPLAQPPPPRPPPPPPPP 636

Query: 210 LHQQSGINFGVLPKGVRIPPSEPS---QRTSDTPPPPPHVPSVVLHKESGINFGVLPKGV 269
              +S  +    P     PPS  S   +R +  PPPPP  P              +P   
Sbjct: 637 PSSRSIPSPSAPPPPPPPPPSFGSTGNKRQAQPPPPPPPPPPT-----------RIPAAK 696

Query: 270 RIPPSGPSQKTSES-----------PPPPPHVPSFVLHKESGINFGVLPKGVRIPPSGPC 329
             PP  P   TS S           PPPPP  P          N    PK    PP  P 
Sbjct: 697 CAPPPPPPPPTSHSGSIRVGPPSTPPPPPPPPPK--------ANISNAPKPPAPPPLPPS 756

Query: 330 QRFSAYPPPPPHAPSVVLHKKSKIHFVRYPRNTPIPPSAPSGRVPL 345
                 PPPPP  P                  TP PP  P  + P+
Sbjct: 757 STRLGAPPPPPPPPL---------------SKTPAPPPPPLSKTPV 760

BLAST of Lsi01G016970 vs. TAIR 10
Match: AT4G18670.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 48.5 bits (114), Expect = 1.2e-05
Identity = 84/279 (30.11%), Postives = 107/279 (38.35%), Query Frame = 0

Query: 80  ILSNEERTP-PSGLSKGTSDNPPPPPHVPSFVLHKESGINFGVLPKGVRIPPSGPSQRTS 139
           ++ +   TP P G     S +P PP  VPS      +  + G  P    I PS PS  T+
Sbjct: 409 VVPSPPTTPSPGGSPPSPSISPSPPITVPS----PPTTPSPGGSPPSPSIVPSPPS--TT 468

Query: 140 DTPPPPPHVPSVVLHQQSGINFGVLPKGVRIPPSGPSQRT-SDTPPPPPHVPSVVLHQQS 199
            +P  PP  P+      S  +    P     PPS P+  T   +PP  P  PS      S
Sbjct: 469 PSPGSPPTSPTTPTPGGSPPSSPTTPTPGGSPPSSPTTPTPGGSPPSSPTTPSPGGSPPS 528

Query: 200 GINFGVLPKGVRIPPS---------EPSQRTSDTPPPPPHVPSVVLHKESGINFGV-LPK 259
                  P  V  PPS          PS  T  +P P P  PS      + I+ G   P 
Sbjct: 529 PSISPSPPITVPSPPSTPTSPGSPPSPSSPTPSSPIPSPPTPST---PPTPISPGQNSPP 588

Query: 260 GVRIPP-SGPSQKTSESPPPPPHVPSFVLHKESGINFGVLPKGVRIPPSGPCQRFS---- 319
            +  PP +GPS  +S SPP PP +PS  +         V P     PPS P   +S    
Sbjct: 589 IIPSPPFTGPSPPSSPSPPLPPVIPSPPI---------VGPTPSSPPPSTPTPVYSPPPP 648

Query: 320 --AYPPPPPHAPSVVLHKKSKIHFVRYPRNTPIPPSAPS 340
              YPPPPP              F  Y   +P PP  P+
Sbjct: 649 STGYPPPPP--------------FTGYSPPSPPPPPPPT 655

BLAST of Lsi01G016970 vs. TAIR 10
Match: AT1G68690.1 (Protein kinase superfamily protein )

HSP 1 Score: 45.8 bits (107), Expect = 8.0e-05
Identity = 71/239 (29.71%), Postives = 87/239 (36.40%), Query Frame = 0

Query: 87  TPPSGLSKGTSDNPPPPPHVPSFVLHKESGINFGVLPKGVRIPPSGPSQRTSDTPPPPPH 146
           +PP  L+  TS   PPP   P                    +PPS P    +  PPPPP 
Sbjct: 18  SPPPPLNNATSPATPPPVTSP--------------------LPPSAPPPNRA--PPPPPP 77

Query: 147 VPSVVLHQQSGINFGVLPK---GVRIPPSG--PSQRTSDTPPPPPHVPSVVLHQQSGINF 206
           V +      +G     LPK       PP    PS   S +PPP P +PS           
Sbjct: 78  VTTSPPPVANGAPPPPLPKPPESSSPPPQPVIPSPPPSTSPPPQPVIPS----------- 137

Query: 207 GVLPKGVRIPPSEPSQRTSDTPPPPPHVPSVVLHKESGINFGVLPKGVR---IPPSGPSQ 266
              P     PP         +PPPP  VP         I     P  VR    PP  PS 
Sbjct: 138 ---PPPSASPPPALVPPLPSSPPPPASVPPPRPSPSPPILVRSPPPSVRPIQSPPPPPSD 197

Query: 267 KTSESPPP--PPHVPSFVLHKESGINFGVLPKGVRIPPSGPCQRFSAYPPP--PPHAPS 314
           + ++SPPP  PP  PS               +  + PPS P +R +  PPP  PP  PS
Sbjct: 198 RPTQSPPPPSPPSPPS--------------ERPTQSPPSPPSERPTQSPPPPSPPSPPS 206

BLAST of Lsi01G016970 vs. TAIR 10
Match: AT1G26150.1 (proline-rich extensin-like receptor kinase 10 )

HSP 1 Score: 42.7 bits (99), Expect = 6.8e-04
Identity = 73/271 (26.94%), Postives = 90/271 (33.21%), Query Frame = 0

Query: 88  PPSGLSKGTSDNPPP------PPHVPSFVLHKESGINFGVLPKGVRIPPSGPSQRTSDTP 147
           PP   +     +PPP      PP  PS      +G     +P      PS P    ++ P
Sbjct: 50  PPETTNTPAQSSPPPETPLSSPPPEPSPPSPSLTGPPPTTIPVSPPPEPSPPPPLPTEAP 109

Query: 148 PPPPHVPSVVLHQQSGINFGVLPKGVRIPPSGP--SQRTSDTPPPPPHVPSVVLHQQSGI 207
           PP   V S              P     PP+ P  S      PPPPP  P  +       
Sbjct: 110 PPANPVSSPPPESSP-----PPPPPTEAPPTTPITSPSPPTNPPPPPESPPSLPAPDPPS 169

Query: 208 NFGVLPKGVRIPPSE------PSQRTSDTPPPPPHVPSVVLHKESGINFGVLPKGVRIPP 267
           N   LP    +PPS       PS   S+ PPPP H+PS              P     P 
Sbjct: 170 N--PLPPPKLVPPSHSPPRHLPSPPASEIPPPPRHLPS--------------PPASERPS 229

Query: 268 SGPSQKTSESPPPPPHVPSFVLHKESGINFGV----LPKGVRIP--PSGPCQRFSAYPPP 327
           + PS     SPPPP H          G          P   + P  PS P       PPP
Sbjct: 230 TPPSDSEHPSPPPPGHPKRREQPPPPGSKRPTPSPPSPSDSKRPVHPSPPSPPEETLPPP 289

Query: 328 PPHAPSVVLHKKSKIHFVRYPRNTPIPPSAP 339
            P +P  +    S    +  P +   PPS P
Sbjct: 290 KP-SPDPLPSNSSSPPTLLPPSSVVSPPSPP 298

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q84ZL02.4e-0630.95Formin-like protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=FH5 PE=2 SV=2[more]
Q9C6S13.5e-0529.72Formin-like protein 14 OS=Arabidopsis thaliana OX=3702 GN=FH14 PE=3 SV=3[more]
Q9SN461.7e-0430.11Leucine-rich repeat extensin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=L... [more]
Match NameE-valueIdentityDescription
A0A6J1HRH71.8e-8456.70actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3... [more]
A0A5D3CGG14.7e-5360.51Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194... [more]
A0A5D3BP869.4e-4655.21Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194... [more]
A0A6P5RDM42.7e-4547.84formin-like protein 5 OS=Prunus avium OX=42229 GN=LOC110745147 PE=4 SV=1[more]
A0A6P5RC981.0e-4447.79formin-like protein 5 OS=Prunus avium OX=42229 GN=LOC110744709 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAG6603169.11.3e-9459.57hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_031744042.14.6e-8757.40proline-rich receptor-like protein kinase PERK9 [Cucumis sativus][more]
XP_022967687.13.6e-8456.70actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima][more]
XP_031744003.12.7e-7956.68abl interactor homolog [Cucumis sativus][more]
XP_038882352.16.4e-7371.88uncharacterized protein LOC120073615 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
AT1G31810.12.5e-0629.72Formin Homology 14 [more]
AT4G18670.11.2e-0530.11Leucine-rich repeat (LRR) family protein [more]
AT1G68690.18.0e-0529.71Protein kinase superfamily protein [more]
AT1G26150.16.8e-0426.94proline-rich extensin-like receptor kinase 10 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..192
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..149
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..231
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..271
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..190
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 205..233
NoneNo IPR availablePANTHERPTHR33599:SF13FORMIN-LIKE PROTEIN 20coord: 76..145
coord: 277..342
NoneNo IPR availablePANTHERPTHR33599:SF13FORMIN-LIKE PROTEIN 20coord: 76..184
NoneNo IPR availablePANTHERPTHR33599:SF13FORMIN-LIKE PROTEIN 20coord: 195..267
IPR039639Protein IDA-likePANTHERPTHR33599PROTEIN IDA-LIKE 5coord: 76..145
IPR039639Protein IDA-likePANTHERPTHR33599PROTEIN IDA-LIKE 5coord: 76..184
IPR039639Protein IDA-likePANTHERPTHR33599PROTEIN IDA-LIKE 5coord: 277..342
coord: 195..267

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G016970.1Lsi01G016970.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010227 floral organ abscission