
Lsi01G016690 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTAGAATCACCCAAAAAAATTCACCTACCATAGTCAACAAATCATCAATAACTCATCATACCATCTCATCTTTCTCTTTCAAGATTTTCATTTCTTTTCTCTCCAAACAAAGCATCTTGGGGAAGAATTTTCTTTTCTCCATCTTTTTTCCCCTTGAACTGGATGAAAATATATTCACAGATGAAGAACAAAGAAAGCTAGAATCCAAGAGGGTTTATCATTTGAGTTCTTGGTGGGTCCCTACTGACCCCATCAAACCTTTTGTCAATACTGTTTGAGAGAAATAAGAAGGATAAGAACTCAAAAACAACTTCAATCCTTTTGCTTTTGGCAGTCCCCTGTCCAAGAGCTACAAGACACCAGACTCCTCCAGAGGGCTTTTGGCCAAAGCACTTCTGCAAAACTCCATCAAAAAAGTTCTAAATTTTGAGTTTTCTTTCATATAAAGTCCCCCTGTTGTGACTTTTTTTTTTCTCATCATTCATCATCTAAGTTCTTCCAGAAAAAGAGAGAAAAAAATGGACATCCACGAATGGGAAATCCTCTCTGATGATGGGTTGCTAGATTACAAAGATGATCAGAAGAAGATTGTTTCAGCTAAGAGAAGTTCAGCTTCTGATGCAAAGATTGTGTTCGATATGAACTACTTCCTGTGTCCATCAATGGATTCCAAGCAAATCAGCCAACTTCCAGGGTCTTCTTCAAAGTTGGTTAAACAGCCGATTCCTGTTCATCTTCAATTGGATTCACCAATTGTCAAAATCTCAGATGATGATGATTCACTGGCACTGAAAGAAAAAGATAAGGAGTCCATGGTGATCAGTGCTGTGCCATCGGTCATGAGTGAGAAGGATCAGAAAGGAGCTGTGGAAGCAGATCAAGACACTGTTACTCAAGTTTTCTTCAAGAAAATGAAGGAAAATGAATTCGTCGACATGAAAATAGACTCACCCAGAGCAAGTAACAAAGGAACAAAGCCTCAAATTGATGTAGGGCATTATCAGTTTGATGATGGGGGTGAGACAAAGGAGAACATTGCAAACTCCCCCAGAATGAATTTGATGAACCAGAAAAGCAACAAAGAGAGTGGTGCCAACAAAGATGAGATGAATTGGGATGGATCCATGGGTGGGTTGAACATATTAAAGTGGAGTTTAAATGGTATTGGAGCCATTTGCTCCTTTGGTGTTGCAGCTGCCACTATTTGTATTCTGTTTTATGGAGGCAATCAACAAAAGCTGAGAATCCAGATCTATACCCATGATAAGGTCAGCAATTCAAAACTTTTATGTAATATTACCTCAAACAGCAATGAATATGCAAACTTATTTCAGTCCATATAACCCATAAACTGCAGCAAACTTATTTCATAGCATTTGGTTGCAGAAATTAAAGCAAGCAGTTCAGCAAGCTACTAGATTAAATGAAGCAATCTCAGCAGCAAGAGGACTTCCACAGACAAGAGCTCACATAACCTGTGGTGGACACTATGATGGGCTCTAAGGAAGCTAAGATTTGGCTCTGCCTTGAACACAGACTCTGACATTAGAGGATGAATTGAGGTGGATTTGCCAAAAGCCCAGTTCTATCATTTTATGCAAAGTTTACCATGTCTGTACAAAAAGATTATAGCTTTGAGAACAAAAAAAGGTCTAGGAATCCTGCTTGGATTATATTGTGGATGGATCCCTACCTGAGTCTATGCCAATACTGAGTGTTGTTCAACTATGAATTTTAAAGGCTTTGTATGGTTTTGCTGTGTCTTACATAATGGTCAGTCTGGAGAAATGATACAATATTTACAAACAAAAGGCAGTGGAAATGAAAGGAGATTATTTTAGCAAAACTTATGGAAGCCTCAATATTTAATGGTTAGATCACCATTTCAATCTCTGTATACAATAACTTCCCTTACTCCAATAAATGTAACCAACTAATTAATAAGTCTTTAGCATTAAAGAATGCCTTGAATCTTAATTTACCTTCAAACCCTTGTTCTTTGATTTTTGACTGACTGGAAACACCTCAATCAAAAGAGCAATTTCCATCTATCAGAACCAAAAAGAAAATCAATTACAGGACTGGAGATTCTCTTGAAAGAAAATCGAATTACTACCCAAGTTGAGTTTAGCTACCAGGCAATAAAGATGTTGCTTTTGTTATCCCTTTGCCCATCTTGCTTATGAGTTGTTGAGTGTTCAACCAAACTTACTCAATTATCCCACTAATTAAAATCGCTTACACACGAGGCAAAGCCATAGATGAATCAAACTTCAGGGCAAAATAATGAAATGGAATTGAGAGAGTGGCCCACTGAATAATGGAGCAAGAAAAATCTAGAACAGAATTCTCTTTCTATTCCTTTTTCTAGATGTGAACAGTAAACAATAATACGAAATCGATCAGATCAAATAATTCAGTAGAGGAAAACTTAAGAAGGGAAGAAATCTGGAGTCCAATGAAAGGGAAAGAGATTCATGAGTCATGACCCACTTCAGAAAGTGAAAGATCAATGGTGGGATTTGAACTTGCCACAAAATATCAAACCATGGCTTGACAACTTGACAACACACCGTAGCTTCGCCATTTGTATTATTGACAAAATACATAGCCTTGAACATCAAACAATGCAACTCATTTACGTAATCAACCCCATTATTTCACAATCAAATTGGCAAAGACGATCAAATTCC GTTAGAATCACCCAAAAAAATTCACCTACCATAGTCAACAAATCATCAATAACTCATCATACCATCTCATCTTTCTCTTTCAAGATTTTCATTTCTTTTCTCTCCAAACAAAGCATCTTGGGGAAGAATTTTCTTTTCTCCATCTTTTTTCCCCTTGAACTGGATGAAAATATATTCACAGATGAAGAACAAAGAAAGCTAGAATCCAAGAGGGTTTATCATTTGAGTTCTTGGTGGGTCCCTACTGACCCCATCAAACCTTTTGTCAATACTGTTTGAGAGAAATAAGAAGGATAAGAACTCAAAAACAACTTCAATCCTTTTGCTTTTGGCAGTCCCCTGTCCAAGAGCTACAAGACACCAGACTCCTCCAGAGGGCTTTTGGCCAAAGCACTTCTGCAAAACTCCATCAAAAAAGTTCTAAATTTTGAGTTTTCTTTCATATAAAGTCCCCCTGTTGTGACTTTTTTTTTTCTCATCATTCATCATCTAAGTTCTTCCAGAAAAAGAGAGAAAAAAATGGACATCCACGAATGGGAAATCCTCTCTGATGATGGGTTGCTAGATTACAAAGATGATCAGAAGAAGATTGTTTCAGCTAAGAGAAGTTCAGCTTCTGATGCAAAGATTGTGTTCGATATGAACTACTTCCTGTGTCCATCAATGGATTCCAAGCAAATCAGCCAACTTCCAGGGTCTTCTTCAAAGTTGGTTAAACAGCCGATTCCTGTTCATCTTCAATTGGATTCACCAATTGTCAAAATCTCAGATGATGATGATTCACTGGCACTGAAAGAAAAAGATAAGGAGTCCATGGTGATCAGTGCTGTGCCATCGGTCATGAGTGAGAAGGATCAGAAAGGAGCTGTGGAAGCAGATCAAGACACTGTTACTCAAGTTTTCTTCAAGAAAATGAAGGAAAATGAATTCGTCGACATGAAAATAGACTCACCCAGAGCAAGTAACAAAGGAACAAAGCCTCAAATTGATGTAGGGCATTATCAGTTTGATGATGGGGGTGAGACAAAGGAGAACATTGCAAACTCCCCCAGAATGAATTTGATGAACCAGAAAAGCAACAAAGAGAGTGGTGCCAACAAAGATGAGATGAATTGGGATGGATCCATGGGTGGGTTGAACATATTAAAGTGGAGTTTAAATGGTATTGGAGCCATTTGCTCCTTTGGTGTTGCAGCTGCCACTATTTGTATTCTGTTTTATGGAGGCAATCAACAAAAGCTGAGAATCCAGATCTATACCCATGATAAGAAATTAAAGCAAGCAGTTCAGCAAGCTACTAGATTAAATGAAGCAATCTCAGCAGCAAGAGGACTTCCACAGACAAGAGCTCACATAACCTGTGGTGGACACTATGATGGGCTCTAAGGAAGCTAAGATTTGGCTCTGCCTTGAACACAGACTCTGACATTAGAGGATGAATTGAGGTGGATTTGCCAAAAGCCCAGTTCTATCATTTTATGCAAAGTTTACCATGTCTGTACAAAAAGATTATAGCTTTGAGAACAAAAAAAGGTCTAGGAATCCTGCTTGGATTATATTGTGGATGGATCCCTACCTGAGTCTATGCCAATACTGAGTGTTGTTCAACTATGAATTTTAAAGGCTTTGTATGGTTTTGCTGTGTCTTACATAATGGTCAGTCTGGAGAAATGATACAATATTTACAAACAAAAGGCAGTGGAAATGAAAGGAGATTATTTTAGCAAAACTTATGGAAGCCTCAATATTTAATGGTTAGATCACCATTTCAATCTCTGTATACAATAACTTCCCTTACTCCAATAAATGTAACCAACTAATTAATAAGTCTTTAGCATTAAAGAATGCCTTGAATCTTAATTTACCTTCAAACCCTTGTTCTTTGATTTTTGACTGACTGGAAACACCTCAATCAAAAGAGCAATTTCCATCTATCAGAACCAAAAAGAAAATCAATTACAGGACTGGAGATTCTCTTGAAAGAAAATCGAATTACTACCCAAGTTGAGTTTAGCTACCAGGCAATAAAGATGTTGCTTTTGTTATCCCTTTGCCCATCTTGCTTATGAGTTGTTGAGTGTTCAACCAAACTTACTCAATTATCCCACTAATTAAAATCGCTTACACACGAGGCAAAGCCATAGATGAATCAAACTTCAGGGCAAAATAATGAAATGGAATTGAGAGAGTGGCCCACTGAATAATGGAGCAAGAAAAATCTAGAACAGAATTCTCTTTCTATTCCTTTTTCTAGATGTGAACAGTAAACAATAATACGAAATCGATCAGATCAAATAATTCAGTAGAGGAAAACTTAAGAAGGGAAGAAATCTGGAGTCCAATGAAAGGGAAAGAGATTCATGAGTCATGACCCACTTCAGAAAGTGAAAGATCAATGGTGGGATTTGAACTTGCCACAAAATATCAAACCATGGCTTGACAACTTGACAACACACCGTAGCTTCGCCATTTGTATTATTGACAAAATACATAGCCTTGAACATCAAACAATGCAACTCATTTACGTAATCAACCCCATTATTTCACAATCAAATTGGCAAAGACGATCAAATTCC ATGGACATCCACGAATGGGAAATCCTCTCTGATGATGGGTTGCTAGATTACAAAGATGATCAGAAGAAGATTGTTTCAGCTAAGAGAAGTTCAGCTTCTGATGCAAAGATTGTGTTCGATATGAACTACTTCCTGTGTCCATCAATGGATTCCAAGCAAATCAGCCAACTTCCAGGGTCTTCTTCAAAGTTGGTTAAACAGCCGATTCCTGTTCATCTTCAATTGGATTCACCAATTGTCAAAATCTCAGATGATGATGATTCACTGGCACTGAAAGAAAAAGATAAGGAGTCCATGGTGATCAGTGCTGTGCCATCGGTCATGAGTGAGAAGGATCAGAAAGGAGCTGTGGAAGCAGATCAAGACACTGTTACTCAAGTTTTCTTCAAGAAAATGAAGGAAAATGAATTCGTCGACATGAAAATAGACTCACCCAGAGCAAGTAACAAAGGAACAAAGCCTCAAATTGATGTAGGGCATTATCAGTTTGATGATGGGGGTGAGACAAAGGAGAACATTGCAAACTCCCCCAGAATGAATTTGATGAACCAGAAAAGCAACAAAGAGAGTGGTGCCAACAAAGATGAGATGAATTGGGATGGATCCATGGGTGGGTTGAACATATTAAAGTGGAGTTTAAATGGTATTGGAGCCATTTGCTCCTTTGGTGTTGCAGCTGCCACTATTTGTATTCTGTTTTATGGAGGCAATCAACAAAAGCTGAGAATCCAGATCTATACCCATGATAAGAAATTAAAGCAAGCAGTTCAGCAAGCTACTAGATTAAATGAAGCAATCTCAGCAGCAAGAGGACTTCCACAGACAAGAGCTCACATAACCTGTGGTGGACACTATGATGGGCTCTAA MDIHEWEILSDDGLLDYKDDQKKIVSAKRSSASDAKIVFDMNYFLCPSMDSKQISQLPGSSSKLVKQPIPVHLQLDSPIVKISDDDDSLALKEKDKESMVISAVPSVMSEKDQKGAVEADQDTVTQVFFKKMKENEFVDMKIDSPRASNKGTKPQIDVGHYQFDDGGETKENIANSPRMNLMNQKSNKESGANKDEMNWDGSMGGLNILKWSLNGIGAICSFGVAAATICILFYGGNQQKLRIQIYTHDKKLKQAVQQATRLNEAISAARGLPQTRAHITCGGHYDGL Homology
BLAST of Lsi01G016690 vs. ExPASy TrEMBL
Match: A0A5A7UW91 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold654G00300 PE=4 SV=1) HSP 1 Score: 494.6 bits (1272), Expect = 2.8e-136 Identity = 259/293 (88.40%), Postives = 272/293 (92.83%), Query Frame = 0
BLAST of Lsi01G016690 vs. ExPASy TrEMBL
Match: A0A1S3B4M8 (uncharacterized protein LOC103485984 OS=Cucumis melo OX=3656 GN=LOC103485984 PE=4 SV=1) HSP 1 Score: 494.6 bits (1272), Expect = 2.8e-136 Identity = 259/293 (88.40%), Postives = 272/293 (92.83%), Query Frame = 0
BLAST of Lsi01G016690 vs. ExPASy TrEMBL
Match: A0A0A0L1C2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G192080 PE=4 SV=1) HSP 1 Score: 490.3 bits (1261), Expect = 5.3e-135 Identity = 256/293 (87.37%), Postives = 270/293 (92.15%), Query Frame = 0
BLAST of Lsi01G016690 vs. ExPASy TrEMBL
Match: A0A6J1IPJ3 (uncharacterized protein LOC111478290 OS=Cucurbita maxima OX=3661 GN=LOC111478290 PE=4 SV=1) HSP 1 Score: 448.0 bits (1151), Expect = 3.0e-122 Identity = 239/292 (81.85%), Postives = 255/292 (87.33%), Query Frame = 0
BLAST of Lsi01G016690 vs. ExPASy TrEMBL
Match: A0A6J1GDX5 (uncharacterized protein LOC111453118 OS=Cucurbita moschata OX=3662 GN=LOC111453118 PE=4 SV=1) HSP 1 Score: 444.5 bits (1142), Expect = 3.4e-121 Identity = 237/292 (81.16%), Postives = 254/292 (86.99%), Query Frame = 0
BLAST of Lsi01G016690 vs. NCBI nr
Match: XP_038882757.1 (uncharacterized protein LOC120073914 [Benincasa hispida]) HSP 1 Score: 524.6 bits (1350), Expect = 5.3e-145 Identity = 271/289 (93.77%), Postives = 278/289 (96.19%), Query Frame = 0
BLAST of Lsi01G016690 vs. NCBI nr
Match: XP_008441987.1 (PREDICTED: uncharacterized protein LOC103485984 [Cucumis melo] >KAA0060102.1 uncharacterized protein E6C27_scaffold39G00200 [Cucumis melo var. makuwa] >TYK08416.1 uncharacterized protein E5676_scaffold654G00300 [Cucumis melo var. makuwa]) HSP 1 Score: 494.6 bits (1272), Expect = 5.8e-136 Identity = 259/293 (88.40%), Postives = 272/293 (92.83%), Query Frame = 0
BLAST of Lsi01G016690 vs. NCBI nr
Match: XP_004147537.1 (uncharacterized protein LOC101222422 [Cucumis sativus] >KGN53936.1 hypothetical protein Csa_021594 [Cucumis sativus]) HSP 1 Score: 490.3 bits (1261), Expect = 1.1e-134 Identity = 256/293 (87.37%), Postives = 270/293 (92.15%), Query Frame = 0
BLAST of Lsi01G016690 vs. NCBI nr
Match: XP_022978250.1 (uncharacterized protein LOC111478290 [Cucurbita maxima]) HSP 1 Score: 448.0 bits (1151), Expect = 6.3e-122 Identity = 239/292 (81.85%), Postives = 255/292 (87.33%), Query Frame = 0
BLAST of Lsi01G016690 vs. NCBI nr
Match: KAG7033665.1 (hypothetical protein SDJN02_03390 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 444.5 bits (1142), Expect = 6.9e-121 Identity = 236/292 (80.82%), Postives = 255/292 (87.33%), Query Frame = 0
BLAST of Lsi01G016690 vs. TAIR 10
Match: AT5G18130.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03870.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 129.0 bits (323), Expect = 6.0e-30 Identity = 111/313 (35.46%), Postives = 153/313 (48.88%), Query Frame = 0
BLAST of Lsi01G016690 vs. TAIR 10
Match: AT3G03870.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18130.1); Has 47 Blast hits to 47 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 117.1 bits (292), Expect = 2.4e-26 Identity = 109/303 (35.97%), Postives = 143/303 (47.19%), Query Frame = 0
BLAST of Lsi01G016690 vs. TAIR 10
Match: AT5G18130.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03870.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 95.1 bits (235), Expect = 9.6e-20 Identity = 92/277 (33.21%), Postives = 127/277 (45.85%), Query Frame = 0
BLAST of Lsi01G016690 vs. TAIR 10
Match: AT3G03870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18130.1); Has 41 Blast hits to 41 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 79.0 bits (193), Expect = 7.1e-15 Identity = 88/266 (33.08%), Postives = 116/266 (43.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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