Lsi01G016550 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi01G016550
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationchr01: 15098787 .. 15100277 (-)
RNA-Seq ExpressionLsi01G016550
SyntenyLsi01G016550
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGAGCTTATGGAAGGGATGCAAGTTCTTCTCCTCTCAAACTTCCTCTGCGTTTGAAAATCTTCAATCCCTTTCATTCTCTTCATCTCTTCAAATCAAATCAATCTCTCCCTCCGCCGCCACATCCAATTCTCTCCGCCGCTCTCCGCCGCTCTTAATCTCTCAGGTAATTAGATACGCCACAACCCACAAAGCCACCCAACAAATTCGCTCTTTCATCATCACTTCCGGCTTACTTCTCAACGCCACCACCAATTTCATTCTTCTCTTCAATACATTGCTCCATTGTTACCCTCTCTACCAACCCCTTCGCCGCATTCCTCATATTCCCCCTTCCTACGACACTTTCGCCTATTCCTTCCTCCTCCATTCTTCCGCCGATTTGGAGCTCGCCGGACCTGGGCTTCAACTCCACGCTCTCACTCTCAAGGTAGGCTTTCCTTCCCATGTTTATGTTCAAACTGCAATTCTACGTATGTACGCCGCTTCTGGGTTTTTGCTTCATGCTCTGAAGGTGTTCGATGAAATGCCTGACCGAAGCTCTGTCACTTGGAATGTGTTGATTACTGGTTTGGTTAAGTTGGGTGAGCTTGGACGGGCTCGTGCTGTTTTTGATCAGATGCCGATGCGGAATGTTGTGTCTTGGACTGCTATAATCGATGGGTATACTCGTTTAAATAGGCATGAGGAAGCTGCGGATTTGTTTTGGAGAATGGTGGCTCATTATGGTATGGAGCCTACTGAAATAACACTTTTAACTATTTTCCCTTCGATTTCGAATCTTGGGGGTCTTAAGATTTGTCAATCTGTCCATGCTTATGCAGAGAAGAAAGGGTTTAATGTATCTGATGTACGCATTTCTAATTCATTGATTGATTGTTATGCGAAATGTGGTTGTATTGATAGTGCATCAAGGGTGTTTGAAGAAATGTCAGCTGAAAGAAAGAATTTGGTGTCTTGGACATCGATAATCTCAGGACTCACAATGCATGGAATGGGAAAAGAAGCTATGGAGAGTTTTGAAATTATGGAGAAAGAAGGCCAGGAGCCGAACCGAGTCACGTTCTTGAGCATTATAAGTGCTTGCAGCCATGGAGGACTGGTTGAGGAAGGTCTAGAGTTTTTCAAAAAGATGGTTGATGAGTATCAGATTGAGCCGGATATAATGCACTATGGGGGTTTAATAGACATGTTGGGAAGAGCAGGGAAGCTAGAAGAAGCTGAAAAAATAGCTTTGGAGATACCTACAGAGATTGCCAATGTTGTTGTTTGGAGGACACTTTTAGGTGCCTGTAGTTTTCACGGTAATGTATCGATTGCTGAGAGGGTAACTTGGAGGATATTAAACATGGAGGGAGCATATGGAGGTGATTATGTGCTCATGTCTAACATTTTTGCTGCAGCTGGAAAATTTGGAGATGCAGAGAGATGGAGAAGATTGATGGATTCTAACAATTCCTCCAAAATTCCAGGACAGAGCCTTGTCTAA

mRNA sequence

ATGCAGAGCTTATGGAAGGGATGCAAGTTCTTCTCCTCTCAAACTTCCTCTGCGTTTGAAAATCTTCAATCCCTTTCATTCTCTTCATCTCTTCAAATCAAATCAATCTCTCCCTCCGCCGCCACATCCAATTCTCTCCGCCGCTCTCCGCCGCTCTTAATCTCTCAGGTAATTAGATACGCCACAACCCACAAAGCCACCCAACAAATTCGCTCTTTCATCATCACTTCCGGCTTACTTCTCAACGCCACCACCAATTTCATTCTTCTCTTCAATACATTGCTCCATTGTTACCCTCTCTACCAACCCCTTCGCCGCATTCCTCATATTCCCCCTTCCTACGACACTTTCGCCTATTCCTTCCTCCTCCATTCTTCCGCCGATTTGGAGCTCGCCGGACCTGGGCTTCAACTCCACGCTCTCACTCTCAAGGTAGGCTTTCCTTCCCATGTTTATGTTCAAACTGCAATTCTACGTATGTACGCCGCTTCTGGGTTTTTGCTTCATGCTCTGAAGGTGTTCGATGAAATGCCTGACCGAAGCTCTGTCACTTGGAATGTGTTGATTACTGGTTTGGTTAAGTTGGGTGAGCTTGGACGGGCTCGTGCTGTTTTTGATCAGATGCCGATGCGGAATGTTGTGTCTTGGACTGCTATAATCGATGGGTATACTCGTTTAAATAGGCATGAGGAAGCTGCGGATTTGTTTTGGAGAATGGTGGCTCATTATGGTATGGAGCCTACTGAAATAACACTTTTAACTATTTTCCCTTCGATTTCGAATCTTGGGGGTCTTAAGATTTGTCAATCTGTCCATGCTTATGCAGAGAAGAAAGGGTTTAATGTATCTGATGTACGCATTTCTAATTCATTGATTGATTGTTATGCGAAATGTGGTTGTATTGATAGTGCATCAAGGGTGTTTGAAGAAATGTCAGCTGAAAGAAAGAATTTGGTGTCTTGGACATCGATAATCTCAGGACTCACAATGCATGGAATGGGAAAAGAAGCTATGGAGAGTTTTGAAATTATGGAGAAAGAAGGCCAGGAGCCGAACCGAGTCACGTTCTTGAGCATTATAAGTGCTTGCAGCCATGGAGGACTGGTTGAGGAAGGTCTAGAGTTTTTCAAAAAGATGGTTGATGAGTATCAGATTGAGCCGGATATAATGCACTATGGGGGTTTAATAGACATGTTGGGAAGAGCAGGGAAGCTAGAAGAAGCTGAAAAAATAGCTTTGGAGATACCTACAGAGATTGCCAATGTTGTTGTTTGGAGGACACTTTTAGGTGCCTGTAGTTTTCACGGTAATGTATCGATTGCTGAGAGGGTAACTTGGAGGATATTAAACATGGAGGGAGCATATGGAGGTGATTATGTGCTCATGTCTAACATTTTTGCTGCAGCTGGAAAATTTGGAGATGCAGAGAGATGGAGAAGATTGATGGATTCTAACAATTCCTCCAAAATTCCAGGACAGAGCCTTGTCTAA

Coding sequence (CDS)

ATGCAGAGCTTATGGAAGGGATGCAAGTTCTTCTCCTCTCAAACTTCCTCTGCGTTTGAAAATCTTCAATCCCTTTCATTCTCTTCATCTCTTCAAATCAAATCAATCTCTCCCTCCGCCGCCACATCCAATTCTCTCCGCCGCTCTCCGCCGCTCTTAATCTCTCAGGTAATTAGATACGCCACAACCCACAAAGCCACCCAACAAATTCGCTCTTTCATCATCACTTCCGGCTTACTTCTCAACGCCACCACCAATTTCATTCTTCTCTTCAATACATTGCTCCATTGTTACCCTCTCTACCAACCCCTTCGCCGCATTCCTCATATTCCCCCTTCCTACGACACTTTCGCCTATTCCTTCCTCCTCCATTCTTCCGCCGATTTGGAGCTCGCCGGACCTGGGCTTCAACTCCACGCTCTCACTCTCAAGGTAGGCTTTCCTTCCCATGTTTATGTTCAAACTGCAATTCTACGTATGTACGCCGCTTCTGGGTTTTTGCTTCATGCTCTGAAGGTGTTCGATGAAATGCCTGACCGAAGCTCTGTCACTTGGAATGTGTTGATTACTGGTTTGGTTAAGTTGGGTGAGCTTGGACGGGCTCGTGCTGTTTTTGATCAGATGCCGATGCGGAATGTTGTGTCTTGGACTGCTATAATCGATGGGTATACTCGTTTAAATAGGCATGAGGAAGCTGCGGATTTGTTTTGGAGAATGGTGGCTCATTATGGTATGGAGCCTACTGAAATAACACTTTTAACTATTTTCCCTTCGATTTCGAATCTTGGGGGTCTTAAGATTTGTCAATCTGTCCATGCTTATGCAGAGAAGAAAGGGTTTAATGTATCTGATGTACGCATTTCTAATTCATTGATTGATTGTTATGCGAAATGTGGTTGTATTGATAGTGCATCAAGGGTGTTTGAAGAAATGTCAGCTGAAAGAAAGAATTTGGTGTCTTGGACATCGATAATCTCAGGACTCACAATGCATGGAATGGGAAAAGAAGCTATGGAGAGTTTTGAAATTATGGAGAAAGAAGGCCAGGAGCCGAACCGAGTCACGTTCTTGAGCATTATAAGTGCTTGCAGCCATGGAGGACTGGTTGAGGAAGGTCTAGAGTTTTTCAAAAAGATGGTTGATGAGTATCAGATTGAGCCGGATATAATGCACTATGGGGGTTTAATAGACATGTTGGGAAGAGCAGGGAAGCTAGAAGAAGCTGAAAAAATAGCTTTGGAGATACCTACAGAGATTGCCAATGTTGTTGTTTGGAGGACACTTTTAGGTGCCTGTAGTTTTCACGGTAATGTATCGATTGCTGAGAGGGTAACTTGGAGGATATTAAACATGGAGGGAGCATATGGAGGTGATTATGTGCTCATGTCTAACATTTTTGCTGCAGCTGGAAAATTTGGAGATGCAGAGAGATGGAGAAGATTGATGGATTCTAACAATTCCTCCAAAATTCCAGGACAGAGCCTTGTCTAA

Protein sequence

MQSLWKGCKFFSSQTSSAFENLQSLSFSSSLQIKSISPSAATSNSLRRSPPLLISQVIRYATTHKATQQIRSFIITSGLLLNATTNFILLFNTLLHCYPLYQPLRRIPHIPPSYDTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMVAHYGMEPTEITLLTIFPSISNLGGLKICQSVHAYAEKKGFNVSDVRISNSLIDCYAKCGCIDSASRVFEEMSAERKNLVSWTSIISGLTMHGMGKEAMESFEIMEKEGQEPNRVTFLSIISACSHGGLVEEGLEFFKKMVDEYQIEPDIMHYGGLIDMLGRAGKLEEAEKIALEIPTEIANVVVWRTLLGACSFHGNVSIAERVTWRILNMEGAYGGDYVLMSNIFAAAGKFGDAERWRRLMDSNNSSKIPGQSLV
Homology
BLAST of Lsi01G016550 vs. ExPASy Swiss-Prot
Match: Q680Z7 (Pentatricopeptide repeat-containing protein At1g09220, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E25 PE=2 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 4.7e-128
Identity = 239/460 (51.96%), Postives = 312/460 (67.83%), Query Frame = 0

Query: 59  RYATTHKATQQIRSFIITSGLLL---NATTNFILLFNTLLHCYP----------LYQPLR 118
           +Y +  K   Q+ S   TSG LL      +  + LFN LL CY           LY  L+
Sbjct: 45  KYESNLKIIHQLHSHFTTSGFLLLHQKQNSGKLFLFNPLLRCYSLGETPLHAYFLYDQLQ 104

Query: 119 RIPHIP------PSYDTFAYSFLLHSSADLELAG--PGLQLHALTLKVGFPSHVYVQTAI 178
           R+  +       P +D+F Y FLL +S++        G+ LH LTLK+GF SHVYVQTA+
Sbjct: 105 RLHFLSDHNKSLPPFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTAL 164

Query: 179 LRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWT 238
           + MY   G ++ A KVFDEMP+R+ VTWNV+ITGL  LG+  +A    ++MP R VVSWT
Sbjct: 165 VGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWT 224

Query: 239 AIIDGYTRLNRHEEAADLFWRMVAHYGMEPTEITLLTIFPSISNLGGLKICQSVHAYAEK 298
            IIDGY R+++ +EA  LF RMVA   ++P EIT+L I P++ NLG LK+C SVHAY  K
Sbjct: 225 TIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGK 284

Query: 299 KGFNVSDVRISNSLIDCYAKCGCIDSASRVFEEMSAERKNLVSWTSIISGLTMHGMGKEA 358
           +GF   D+R++NSLID YAKCGCI SA + F E+   RKNLVSWT++IS   +HGMGKEA
Sbjct: 285 RGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEA 344

Query: 359 MESFEIMEKEGQEPNRVTFLSIISACSHGGLVEEG-LEFFKKMVDEYQIEPDIMHYGGLI 418
           +  F+ ME+ G +PNRVT +S+++ACSHGGL EE  LEFF  MV+EY+I PD+ HYG L+
Sbjct: 345 VSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLV 404

Query: 419 DMLGRAGKLEEAEKIALEIPTEIANVVVWRTLLGACSFHGNVSIAERVTWRILNMEGAYG 478
           DML R G+LEEAEKIALEIP E    VVWR LLGACS + +  +AERVT +++ +E ++G
Sbjct: 405 DMLRRKGRLEEAEKIALEIPIE-EKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHG 464

Query: 479 GDYVLMSNIFAAAGKFGDAERWRRLMDSNNSSKIPGQSLV 497
           GDYVLMSNIF   G+F DA+R+R+ MD    +K+PG S V
Sbjct: 465 GDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503

BLAST of Lsi01G016550 vs. ExPASy Swiss-Prot
Match: Q9FNN7 (Pentatricopeptide repeat-containing protein At5g08510 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E20 PE=2 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 1.6e-80
Identity = 163/414 (39.37%), Postives = 242/414 (58.45%), Query Frame = 0

Query: 90  LFNTLLHCYPL-YQP--------LRRIPHIPPSYDTFAYSFLLHSSADLELAGPGLQLHA 149
           L+N L+  Y + +QP        L     + PS+ TF  +F+  +SA    A P   LH+
Sbjct: 49  LYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTF--NFIFAASASFSSARPLRLLHS 108

Query: 150 LTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGR 209
              + GF S  +  T ++  YA  G L  A +VFDEM  R    WN +ITG  + G++  
Sbjct: 109 QFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKA 168

Query: 210 ARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMVAHYGMEPTEITLLTIFPSIS 269
           A  +FD MP +NV SWT +I G+++   + EA  +F  M     ++P  IT++++ P+ +
Sbjct: 169 AMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACA 228

Query: 270 NLGGLKICQSVHAYAEKKGFNVSDVRISNSLIDCYAKCGCIDSASRVFEEMSAERKNLVS 329
           NLG L+I + +  YA + GF   ++ + N+ I+ Y+KCG ID A R+FEE+  +R NL S
Sbjct: 229 NLGELEIGRRLEGYARENGF-FDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQR-NLCS 288

Query: 330 WTSIISGLTMHGMGKEAMESFEIMEKEGQEPNRVTFLSIISACSHGGLVEEGLEFFKKMV 389
           W S+I  L  HG   EA+  F  M +EG++P+ VTF+ ++ AC HGG+V +G E FK M 
Sbjct: 289 WNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSME 348

Query: 390 DEYQIEPDIMHYGGLIDMLGRAGKLEEAEKIALEIPTEIANVVVWRTLLGACSFHGNVSI 449
           + ++I P + HYG +ID+LGR GKL+EA  +   +P +  + VVW TLLGACSFHGNV I
Sbjct: 349 EVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMK-PDAVVWGTLLGACSFHGNVEI 408

Query: 450 AERVTWRILNMEGAYGGDYVLMSNIFAAAGKFGDAERWRRLMDSNNSSKIPGQS 495
           AE  +  +  +E    G+ V+MSNI+AA  K+    R R+LM     +K  G S
Sbjct: 409 AEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYS 457

BLAST of Lsi01G016550 vs. ExPASy Swiss-Prot
Match: Q9SIL5 (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 2.8e-80
Identity = 165/429 (38.46%), Postives = 259/429 (60.37%), Query Frame = 0

Query: 80  LLNATTN-FILLFNTLLHCY---PLY--------QPLRRIPHIPPSYDTFAYSFLLHSSA 139
           L N  +N  + L+N+++  Y    LY        Q LR+   +P   D F + F+  S A
Sbjct: 64  LFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELP---DRFTFPFMFKSCA 123

Query: 140 DLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNV 199
            L     G Q+H    K G   HV  + A++ MY     L+ A KVFDEM +R  ++WN 
Sbjct: 124 SLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNS 183

Query: 200 LITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMVAHYGMEP 259
           L++G  +LG++ +A+ +F  M  + +VSWTA+I GYT +  + EA D F+R +   G+EP
Sbjct: 184 LLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMD-FFREMQLAGIEP 243

Query: 260 TEITLLTIFPSISNLGGLKICQSVHAYAEKKGFNVSDVRISNSLIDCYAKCGCIDSASRV 319
            EI+L+++ PS + LG L++ + +H YAE++GF +    + N+LI+ Y+KCG I  A ++
Sbjct: 244 DEISLISVLPSCAQLGSLELGKWIHLYAERRGF-LKQTGVCNALIEMYSKCGVISQAIQL 303

Query: 320 FEEMSAERKNLVSWTSIISGLTMHGMGKEAMESFEIMEKEGQEPNRVTFLSIISACSHGG 379
           F +M  E K+++SW+++ISG   HG    A+E+F  M++   +PN +TFL ++SACSH G
Sbjct: 304 FGQM--EGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVG 363

Query: 380 LVEEGLEFFKKMVDEYQIEPDIMHYGGLIDMLGRAGKLEEAEKIALEIPTEIANVVVWRT 439
           + +EGL +F  M  +YQIEP I HYG LID+L RAGKLE A +I   +P +  +  +W +
Sbjct: 364 MWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMK-PDSKIWGS 423

Query: 440 LLGACSFHGNVSIAERVTWRILNMEGAYGGDYVLMSNIFAAAGKFGDAERWRRLMDSNNS 497
           LL +C   GN+ +A      ++ +E    G+YVL++NI+A  GK+ D  R R+++ + N 
Sbjct: 424 LLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENM 483

BLAST of Lsi01G016550 vs. ExPASy Swiss-Prot
Match: Q9CA54 (Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H71 PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.4e-76
Identity = 151/413 (36.56%), Postives = 233/413 (56.42%), Query Frame = 0

Query: 115 DTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVF 174
           D+F+++F++ +  +      G Q+H   LK G  SH++V T ++ MY   G +  A KVF
Sbjct: 105 DSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVF 164

Query: 175 DEMPD-------------------------------RSSVTWNVLITGLVKLGELGRARA 234
           DEM                                 R+  +WNV++ G +K GEL  A+ 
Sbjct: 165 DEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKR 224

Query: 235 VFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMVAHYGMEPTEITLLTIFPSISNLG 294
           +F +MP R+ VSW+ +I G        E+  L++R +   GM P E++L  +  + S  G
Sbjct: 225 IFSEMPHRDDVSWSTMIVGIAHNGSFNESF-LYFRELQRAGMSPNEVSLTGVLSACSQSG 284

Query: 295 GLKICQSVHAYAEKKGFNVSDVRISNSLIDCYAKCGCIDSASRVFEEMSAERKNLVSWTS 354
             +  + +H + EK G++   V ++N+LID Y++CG +  A  VFE M  E++ +VSWTS
Sbjct: 285 SFEFGKILHGFVEKAGYSWI-VSVNNALIDMYSRCGNVPMARLVFEGMQ-EKRCIVSWTS 344

Query: 355 IISGLTMHGMGKEAMESFEIMEKEGQEPNRVTFLSIISACSHGGLVEEGLEFFKKMVDEY 414
           +I+GL MHG G+EA+  F  M   G  P+ ++F+S++ ACSH GL+EEG ++F +M   Y
Sbjct: 345 MIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVY 404

Query: 415 QIEPDIMHYGGLIDMLGRAGKLEEAEKIALEIPTEIANVVVWRTLLGACSFHGNVSIAER 474
            IEP+I HYG ++D+ GR+GKL++A     ++P      +VWRTLLGACS HGN+ +AE+
Sbjct: 405 HIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIP-PTAIVWRTLLGACSSHGNIELAEQ 464

Query: 475 VTWRILNMEGAYGGDYVLMSNIFAAAGKFGDAERWRRLMDSNNSSKIPGQSLV 497
           V  R+  ++    GD VL+SN +A AGK+ D    R+ M      K    SLV
Sbjct: 465 VKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLV 513

BLAST of Lsi01G016550 vs. ExPASy Swiss-Prot
Match: Q9FMA1 (Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E13 PE=2 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 3.2e-76
Identity = 147/384 (38.28%), Postives = 233/384 (60.68%), Query Frame = 0

Query: 115 DTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVF 174
           DTF + F+L  +  +     G Q+H   +  GF S V+V T +++MY + G L  A K+F
Sbjct: 115 DTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMF 174

Query: 175 DEMPDRSSVTWNVLITGLVKLGELGRARAVFDQMP--MRNVVSWTAIIDGYTRLNRHEEA 234
           DEM  +    WN L+ G  K+GE+  AR++ + MP  +RN VSWT +I GY +  R  EA
Sbjct: 175 DEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEA 234

Query: 235 ADLFWRMVAHYGMEPTEITLLTIFPSISNLGGLKICQSVHAYAEKKGFNVSDVRISNSLI 294
            ++F RM+    +EP E+TLL +  + ++LG L++ + + +Y + +G N + V ++N++I
Sbjct: 235 IEVFQRMLME-NVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRA-VSLNNAVI 294

Query: 295 DCYAKCGCIDSASRVFEEMSAERKNLVSWTSIISGLTMHGMGKEAMESFEIMEKEGQEPN 354
           D YAK G I  A  VFE      +N+V+WT+II+GL  HG G EA+  F  M K G  PN
Sbjct: 295 DMYAKSGNITKALDVFE--CVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPN 354

Query: 355 RVTFLSIISACSHGGLVEEGLEFFKKMVDEYQIEPDIMHYGGLIDMLGRAGKLEEAEKIA 414
            VTF++I+SACSH G V+ G   F  M  +Y I P+I HYG +ID+LGRAGKL EA+++ 
Sbjct: 355 DVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVI 414

Query: 415 LEIPTEIANVVVWRTLLGACSFHGNVSIAERVTWRILNMEGAYGGDYVLMSNIFAAAGKF 474
             +P + AN  +W +LL A + H ++ + ER    ++ +E    G+Y+L++N+++  G++
Sbjct: 415 KSMPFK-ANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRW 474

Query: 475 GDAERWRRLMDSNNSSKIPGQSLV 497
            ++   R +M      K+ G+S +
Sbjct: 475 DESRMMRNMMKGIGVKKMAGESSI 493

BLAST of Lsi01G016550 vs. ExPASy TrEMBL
Match: A0A5A7UYK1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold39G00550 PE=4 SV=1)

HSP 1 Score: 872.5 bits (2253), Expect = 8.6e-250
Identity = 438/496 (88.31%), Postives = 458/496 (92.34%), Query Frame = 0

Query: 1   MQSLWKGCKFFSSQTSSAFENLQSLSFSSSLQIKSISPSAATSNSLRRSPPLLISQVIRY 60
           M  LWKGCKF SSQ+SS F+NLQ LSFSS LQIKS SPSAA S+SL  SP  LISQV +Y
Sbjct: 1   MHCLWKGCKFISSQSSSTFQNLQFLSFSSFLQIKSFSPSAA-SHSLCFSPSFLISQVFKY 60

Query: 61  ATTHKATQQIRSFIITSGLLLNATTNFILLFNTLLHCYPLYQPLRRIPHIPPSYDTFAYS 120
           ATTHKA QQIRSFII SGLLLNATTNFILL NTLLHCYPLYQPLR+ P IPPSYDTFAYS
Sbjct: 61  ATTHKAAQQIRSFIIASGLLLNATTNFILLCNTLLHCYPLYQPLRQFPRIPPSYDTFAYS 120

Query: 121 FLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDR 180
           FL HS ADLEL GPG QLHALT K+GFPSHVYVQTAILRMYA+SGFLL ALKVFDEMPDR
Sbjct: 121 FLFHSCADLELIGPGFQLHALTFKLGFPSHVYVQTAILRMYASSGFLLDALKVFDEMPDR 180

Query: 181 SSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMV 240
           SSVTWNVLITGLVKLGEL RAR VFDQMPM+NVVSWTAIIDGYTRLNRHEEAA LFWRMV
Sbjct: 181 SSVTWNVLITGLVKLGELRRAREVFDQMPMQNVVSWTAIIDGYTRLNRHEEAAGLFWRMV 240

Query: 241 AHYGMEPTEITLLTIFPSISNLGGLKICQSVHAYAEKKGFNVSDVRISNSLIDCYAKCGC 300
           AHYGMEPTEITLLTIFPSISNLG LKICQSVHAYAEKKGF VSDVR++NSLIDCYAKCGC
Sbjct: 241 AHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEKKGFKVSDVRVANSLIDCYAKCGC 300

Query: 301 IDSASRVFEEMSAERKNLVSWTSIISGLTMHGMGKEAMESFEIMEKEGQEPNRVTFLSII 360
           I+SAS+VFEEMSAERKNLVSWTSIISG TMHGMGKEAMESFEIM KEG EPNRVTFLSI+
Sbjct: 301 INSASKVFEEMSAERKNLVSWTSIISGFTMHGMGKEAMESFEIMVKEGHEPNRVTFLSIV 360

Query: 361 SACSHGGLVEEGLEFFKKMVDEYQIEPDIMHYGGLIDMLGRAGKLEEAEKIALEIPTEIA 420
           SACSHGGLVEEGLEFFKKMV EYQI+PDIMHYG LIDMLGRAG++EEAEKIALEIP EIA
Sbjct: 361 SACSHGGLVEEGLEFFKKMVAEYQIKPDIMHYGSLIDMLGRAGRIEEAEKIALEIPKEIA 420

Query: 421 NVVVWRTLLGACSFHGNVSIAERVTWRILNMEGAYGGDYVLMSNIFAAAGKFGDAERWRR 480
           NVV+WRTLLGACSFHGNVS+AERVT RILNMEGAYGGDYVLMSNIFAAAGK+GDAERWRR
Sbjct: 421 NVVIWRTLLGACSFHGNVSMAERVTQRILNMEGAYGGDYVLMSNIFAAAGKYGDAERWRR 480

Query: 481 LMDSNNSSKIPGQSLV 497
            MDS+N SKIPGQSLV
Sbjct: 481 SMDSSNFSKIPGQSLV 495

BLAST of Lsi01G016550 vs. ExPASy TrEMBL
Match: A0A1S4DUC6 (pentatricopeptide repeat-containing protein At1g09220, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103485965 PE=4 SV=1)

HSP 1 Score: 872.5 bits (2253), Expect = 8.6e-250
Identity = 438/496 (88.31%), Postives = 458/496 (92.34%), Query Frame = 0

Query: 1   MQSLWKGCKFFSSQTSSAFENLQSLSFSSSLQIKSISPSAATSNSLRRSPPLLISQVIRY 60
           M  LWKGCKF SSQ+SS F+NLQ LSFSS LQIKS SPSAA S+SL  SP  LISQV +Y
Sbjct: 1   MHCLWKGCKFISSQSSSTFQNLQFLSFSSFLQIKSFSPSAA-SHSLCFSPSFLISQVFKY 60

Query: 61  ATTHKATQQIRSFIITSGLLLNATTNFILLFNTLLHCYPLYQPLRRIPHIPPSYDTFAYS 120
           ATTHKA QQIRSFII SGLLLNATTNFILL NTLLHCYPLYQPLR+ P IPPSYDTFAYS
Sbjct: 61  ATTHKAAQQIRSFIIASGLLLNATTNFILLCNTLLHCYPLYQPLRQFPRIPPSYDTFAYS 120

Query: 121 FLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDR 180
           FL HS ADLEL GPG QLHALT K+GFPSHVYVQTAILRMYA+SGFLL ALKVFDEMPDR
Sbjct: 121 FLFHSCADLELIGPGFQLHALTFKLGFPSHVYVQTAILRMYASSGFLLDALKVFDEMPDR 180

Query: 181 SSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMV 240
           SSVTWNVLITGLVKLGEL RAR VFDQMPM+NVVSWTAIIDGYTRLNRHEEAA LFWRMV
Sbjct: 181 SSVTWNVLITGLVKLGELRRAREVFDQMPMQNVVSWTAIIDGYTRLNRHEEAAGLFWRMV 240

Query: 241 AHYGMEPTEITLLTIFPSISNLGGLKICQSVHAYAEKKGFNVSDVRISNSLIDCYAKCGC 300
           AHYGMEPTEITLLTIFPSISNLG LKICQSVHAYAEKKGF VSDVR++NSLIDCYAKCGC
Sbjct: 241 AHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEKKGFKVSDVRVANSLIDCYAKCGC 300

Query: 301 IDSASRVFEEMSAERKNLVSWTSIISGLTMHGMGKEAMESFEIMEKEGQEPNRVTFLSII 360
           I+SAS+VFEEMSAERKNLVSWTSIISG TMHGMGKEAMESFEIM KEG EPNRVTFLSI+
Sbjct: 301 INSASKVFEEMSAERKNLVSWTSIISGFTMHGMGKEAMESFEIMVKEGHEPNRVTFLSIV 360

Query: 361 SACSHGGLVEEGLEFFKKMVDEYQIEPDIMHYGGLIDMLGRAGKLEEAEKIALEIPTEIA 420
           SACSHGGLVEEGLEFFKKMV EYQI+PDIMHYG LIDMLGRAG++EEAEKIALEIP EIA
Sbjct: 361 SACSHGGLVEEGLEFFKKMVAEYQIKPDIMHYGSLIDMLGRAGRIEEAEKIALEIPKEIA 420

Query: 421 NVVVWRTLLGACSFHGNVSIAERVTWRILNMEGAYGGDYVLMSNIFAAAGKFGDAERWRR 480
           NVV+WRTLLGACSFHGNVS+AERVT RILNMEGAYGGDYVLMSNIFAAAGK+GDAERWRR
Sbjct: 421 NVVIWRTLLGACSFHGNVSMAERVTQRILNMEGAYGGDYVLMSNIFAAAGKYGDAERWRR 480

Query: 481 LMDSNNSSKIPGQSLV 497
            MDS+N SKIPGQSLV
Sbjct: 481 SMDSSNFSKIPGQSLV 495

BLAST of Lsi01G016550 vs. ExPASy TrEMBL
Match: A0A5D3CDM6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold654G00650 PE=4 SV=1)

HSP 1 Score: 870.2 bits (2247), Expect = 4.3e-249
Identity = 437/496 (88.10%), Postives = 457/496 (92.14%), Query Frame = 0

Query: 1   MQSLWKGCKFFSSQTSSAFENLQSLSFSSSLQIKSISPSAATSNSLRRSPPLLISQVIRY 60
           M  LWKGCKF SSQ+SS F+NLQ LSFSS LQIKS SPSAA S+SL  SP  LISQV +Y
Sbjct: 1   MHCLWKGCKFISSQSSSTFQNLQFLSFSSFLQIKSFSPSAA-SHSLCFSPSFLISQVFKY 60

Query: 61  ATTHKATQQIRSFIITSGLLLNATTNFILLFNTLLHCYPLYQPLRRIPHIPPSYDTFAYS 120
           ATTHKA QQIRSFII SGLLLNATTNFILL NTLLHCYPLYQPLR+ P IPPSYDTFAYS
Sbjct: 61  ATTHKAAQQIRSFIIASGLLLNATTNFILLCNTLLHCYPLYQPLRQFPRIPPSYDTFAYS 120

Query: 121 FLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDR 180
           FL HS ADLEL GPG QLHALT K+GFPSHVYVQTAILRMYA+SGFLL ALKVFDEMPDR
Sbjct: 121 FLFHSCADLELIGPGFQLHALTFKLGFPSHVYVQTAILRMYASSGFLLDALKVFDEMPDR 180

Query: 181 SSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMV 240
           SSVTWNVLITGLVKLGEL RAR VFDQMPM+NVVSWTAIIDGYTRLNRHEEAA LFWRMV
Sbjct: 181 SSVTWNVLITGLVKLGELRRAREVFDQMPMQNVVSWTAIIDGYTRLNRHEEAAGLFWRMV 240

Query: 241 AHYGMEPTEITLLTIFPSISNLGGLKICQSVHAYAEKKGFNVSDVRISNSLIDCYAKCGC 300
           AHYGMEPTEITLLTIFPSISNLG LKICQSVHAYAEKKGF VSDVR++NSLIDCYAKCGC
Sbjct: 241 AHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEKKGFKVSDVRVANSLIDCYAKCGC 300

Query: 301 IDSASRVFEEMSAERKNLVSWTSIISGLTMHGMGKEAMESFEIMEKEGQEPNRVTFLSII 360
           I+SAS+VFEEMSAERKNLVSWTSIISG TMHGMGKEAMESFEIM KEG EPNRVTFLSI+
Sbjct: 301 INSASKVFEEMSAERKNLVSWTSIISGFTMHGMGKEAMESFEIMVKEGHEPNRVTFLSIV 360

Query: 361 SACSHGGLVEEGLEFFKKMVDEYQIEPDIMHYGGLIDMLGRAGKLEEAEKIALEIPTEIA 420
           SACSHGGLVEEGLEF KKMV EYQI+PDIMHYG LIDMLGRAG++EEAEKIALEIP EIA
Sbjct: 361 SACSHGGLVEEGLEFIKKMVAEYQIKPDIMHYGSLIDMLGRAGRIEEAEKIALEIPKEIA 420

Query: 421 NVVVWRTLLGACSFHGNVSIAERVTWRILNMEGAYGGDYVLMSNIFAAAGKFGDAERWRR 480
           NVV+WRTLLGACSFHGNVS+AERVT RILNMEGAYGGDYVLMSNIFAAAGK+GDAERWRR
Sbjct: 421 NVVIWRTLLGACSFHGNVSMAERVTQRILNMEGAYGGDYVLMSNIFAAAGKYGDAERWRR 480

Query: 481 LMDSNNSSKIPGQSLV 497
            MDS+N SKIPGQSLV
Sbjct: 481 SMDSSNFSKIPGQSLV 495

BLAST of Lsi01G016550 vs. ExPASy TrEMBL
Match: A0A0A0L1E8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G193260 PE=4 SV=1)

HSP 1 Score: 862.1 bits (2226), Expect = 1.2e-246
Identity = 431/496 (86.90%), Postives = 458/496 (92.34%), Query Frame = 0

Query: 1   MQSLWKGCKFFSSQTSSAFENLQSLSFSSSLQIKSISPSAATSNSLRRSPPLLISQVIRY 60
           M SLWKGCKFFS ++SS  +NLQ LSFSS LQIKS+SPSAA S+ LR S   LISQVI+Y
Sbjct: 1   MHSLWKGCKFFSPRSSSTSQNLQFLSFSSFLQIKSLSPSAA-SDPLRCSSSFLISQVIKY 60

Query: 61  ATTHKATQQIRSFIITSGLLLNATTNFILLFNTLLHCYPLYQPLRRIPHIPPSYDTFAYS 120
           ATTHKATQQIRSFIITSGLLLNAT NFILL NTLLHCYPLYQPLR+ P IPPSYDTFAYS
Sbjct: 61  ATTHKATQQIRSFIITSGLLLNATANFILLCNTLLHCYPLYQPLRQFPRIPPSYDTFAYS 120

Query: 121 FLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDR 180
           FLLHS ADLEL GPG QLHALT K+GFPSHVYVQTA+LRMYAASGFLL A+KVFDEMPDR
Sbjct: 121 FLLHSCADLELIGPGFQLHALTFKLGFPSHVYVQTAVLRMYAASGFLLDAMKVFDEMPDR 180

Query: 181 SSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMV 240
           SSVTWNVLITGLVK GEL RAR VFDQMPMR VVSWTAIIDGYTRLNRHEEAA LFWRMV
Sbjct: 181 SSVTWNVLITGLVKFGELKRARDVFDQMPMRTVVSWTAIIDGYTRLNRHEEAAGLFWRMV 240

Query: 241 AHYGMEPTEITLLTIFPSISNLGGLKICQSVHAYAEKKGFNVSDVRISNSLIDCYAKCGC 300
           AH+GMEP E+TLLTIFP+ISNLG LK+CQSVHAYAEKKGF VSDVRI+NSLIDCYAKCGC
Sbjct: 241 AHFGMEPNEVTLLTIFPAISNLGALKLCQSVHAYAEKKGFKVSDVRIANSLIDCYAKCGC 300

Query: 301 IDSASRVFEEMSAERKNLVSWTSIISGLTMHGMGKEAMESFEIMEKEGQEPNRVTFLSII 360
           I+SAS+VFEEMSAE KNLVSWTSIISG TMHGMGKEAMESFEIMEKEG EPNRVTFLSI+
Sbjct: 301 INSASKVFEEMSAEIKNLVSWTSIISGFTMHGMGKEAMESFEIMEKEGHEPNRVTFLSIV 360

Query: 361 SACSHGGLVEEGLEFFKKMVDEYQIEPDIMHYGGLIDMLGRAGKLEEAEKIALEIPTEIA 420
           SACSHGGLVEEGLEFF+KMV EYQI+PDIMHYG LIDMLGRAG++EEAEKIALEIP EIA
Sbjct: 361 SACSHGGLVEEGLEFFEKMVAEYQIKPDIMHYGSLIDMLGRAGRIEEAEKIALEIPKEIA 420

Query: 421 NVVVWRTLLGACSFHGNVSIAERVTWRILNMEGAYGGDYVLMSNIFAAAGKFGDAERWRR 480
           +VV+WRTLLGACSFHGNVS+AERVT RILNMEGAYGGDYVLMSNIFAAAGK+GDAERWRR
Sbjct: 421 SVVIWRTLLGACSFHGNVSMAERVTQRILNMEGAYGGDYVLMSNIFAAAGKYGDAERWRR 480

Query: 481 LMDSNNSSKIPGQSLV 497
           LMDS+  SKIPGQSLV
Sbjct: 481 LMDSSKFSKIPGQSLV 495

BLAST of Lsi01G016550 vs. ExPASy TrEMBL
Match: A0A6J1IS71 (pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111478217 PE=4 SV=1)

HSP 1 Score: 850.1 bits (2195), Expect = 4.6e-243
Identity = 425/496 (85.69%), Postives = 452/496 (91.13%), Query Frame = 0

Query: 1   MQSLWKGCKFFSSQTSSAFENLQSLSFSSSLQIKSISPSAATSNSLRRSPPLLISQVIRY 60
           MQSLWK  KF SSQT S F+NLQ           SISPSAA  +     PPLLISQ+I+Y
Sbjct: 12  MQSLWKRGKFLSSQTFSPFQNLQFF---------SISPSAAYKSLRHSPPPLLISQLIKY 71

Query: 61  ATTHKATQQIRSFIITSGLLLNATTNFILLFNTLLHCYPLYQPLRRIPHIPPSYDTFAYS 120
           AT+HKATQQIRSFIITSGLL NAT NFILL NTLLHCYPLYQPLRRIPH PPSYDTFAYS
Sbjct: 72  ATSHKATQQIRSFIITSGLLFNATANFILLCNTLLHCYPLYQPLRRIPHTPPSYDTFAYS 131

Query: 121 FLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDR 180
           FLLHS ADLEL GPGLQLHALTLKVGFPSHVYVQTAI+RMYAA GFLL ALKVFDEMPDR
Sbjct: 132 FLLHSCADLELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLLDALKVFDEMPDR 191

Query: 181 SSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMV 240
           +SVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFW+MV
Sbjct: 192 NSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMV 251

Query: 241 AHYGMEPTEITLLTIFPSISNLGGLKICQSVHAYAEKKGFNVSDVRISNSLIDCYAKCGC 300
           AHYGMEPTEITLLTIFPSISNLG LKIC SVHAYAEKKGF VSDVRI+NSLIDCY+KCGC
Sbjct: 252 AHYGMEPTEITLLTIFPSISNLGALKICHSVHAYAEKKGFKVSDVRIANSLIDCYSKCGC 311

Query: 301 IDSASRVFEEMSAERKNLVSWTSIISGLTMHGMGKEAMESFEIMEKEGQEPNRVTFLSII 360
           I+SAS VFEEMSAERKNLV+WTSII+G TMHGMGKEA+ESFE M+ EG EPNRVTFLSI+
Sbjct: 312 INSASMVFEEMSAERKNLVTWTSIITGFTMHGMGKEAVESFERMKNEGHEPNRVTFLSIL 371

Query: 361 SACSHGGLVEEGLEFFKKMVDEYQIEPDIMHYGGLIDMLGRAGKLEEAEKIALEIPTEIA 420
           SACSHGGLVEEGLEFFKKMV+EYQI+PDIMHYG LIDMLGRAG++EEAE+IALEIP EIA
Sbjct: 372 SACSHGGLVEEGLEFFKKMVEEYQIKPDIMHYGSLIDMLGRAGRVEEAERIALEIPMEIA 431

Query: 421 NVVVWRTLLGACSFHGNVSIAERVTWRILNMEGAYGGDYVLMSNIFAAAGKFGDAERWRR 480
           NVV+WRTLLGACSFH NVSIAERVT RIL+MEGAYGGDYVLMSNIFAAAGK+GDAE+WRR
Sbjct: 432 NVVIWRTLLGACSFHSNVSIAERVTRRILDMEGAYGGDYVLMSNIFAAAGKYGDAEKWRR 491

Query: 481 LMDSNNSSKIPGQSLV 497
           LMDS+ SSKIPGQSL+
Sbjct: 492 LMDSSKSSKIPGQSLL 498

BLAST of Lsi01G016550 vs. NCBI nr
Match: XP_038882176.1 (pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like isoform X1 [Benincasa hispida] >XP_038882177.1 pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like isoform X1 [Benincasa hispida] >XP_038882178.1 pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like isoform X1 [Benincasa hispida])

HSP 1 Score: 906.7 bits (2342), Expect = 8.5e-260
Identity = 453/496 (91.33%), Postives = 474/496 (95.56%), Query Frame = 0

Query: 1   MQSLWKGCKFFSSQTSSAFENLQSLSFSSSLQIKSISPSAATSNSLRRSPPLLISQVIRY 60
           M+SLWKGCKF SSQT SAFENLQ LSFSSSL IKSISPSAA SNSLRRSPPLLISQVI+Y
Sbjct: 20  MRSLWKGCKFLSSQTFSAFENLQFLSFSSSLPIKSISPSAA-SNSLRRSPPLLISQVIKY 79

Query: 61  ATTHKATQQIRSFIITSGLLLNATTNFILLFNTLLHCYPLYQPLRRIPHIPPSYDTFAYS 120
           ATTHKATQ+IRSFIITSGLLLNATTNFILL NTLLHCYPLYQPLRR PHIPP+YDTFAYS
Sbjct: 80  ATTHKATQRIRSFIITSGLLLNATTNFILLCNTLLHCYPLYQPLRRFPHIPPAYDTFAYS 139

Query: 121 FLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDR 180
           FLLHS ADLELAGPGLQLH LTLK+GFPSHVYVQTAILRMYAASGFLL ALKVFDEMPDR
Sbjct: 140 FLLHSCADLELAGPGLQLHTLTLKLGFPSHVYVQTAILRMYAASGFLLDALKVFDEMPDR 199

Query: 181 SSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMV 240
           SSVTWNVLITGLVKLGELGRARAVFDQMP+RNVVSWTAIIDGYTRLNRHEEA  LFW MV
Sbjct: 200 SSVTWNVLITGLVKLGELGRARAVFDQMPIRNVVSWTAIIDGYTRLNRHEEAVGLFWTMV 259

Query: 241 AHYGMEPTEITLLTIFPSISNLGGLKICQSVHAYAEKKGFNVSDVRISNSLIDCYAKCGC 300
           AHYG+EPTEITLLTIFPSISNLGGLKICQSVHAYAEKKGF VSD+RI+NSLIDCYAKCGC
Sbjct: 260 AHYGVEPTEITLLTIFPSISNLGGLKICQSVHAYAEKKGFKVSDIRIANSLIDCYAKCGC 319

Query: 301 IDSASRVFEEMSAERKNLVSWTSIISGLTMHGMGKEAMESFEIMEKEGQEPNRVTFLSII 360
           I SASRVFEEMSAERKNLVSWTSIISG TMHGMGKEAMESFEIM+KEG +PNRVTFLSI+
Sbjct: 320 IFSASRVFEEMSAERKNLVSWTSIISGFTMHGMGKEAMESFEIMKKEGHDPNRVTFLSIL 379

Query: 361 SACSHGGLVEEGLEFFKKMVDEYQIEPDIMHYGGLIDMLGRAGKLEEAEKIALEIPTEIA 420
           SACSHGGLV+EGLEFF+KMVDEYQIEPDIMHYG LIDMLGRAG+LEEAEKIALEIP EI 
Sbjct: 380 SACSHGGLVKEGLEFFQKMVDEYQIEPDIMHYGSLIDMLGRAGRLEEAEKIALEIPMEIT 439

Query: 421 NVVVWRTLLGACSFHGNVSIAERVTWRILNMEGAYGGDYVLMSNIFAAAGKFGDAERWRR 480
           NVV+WRTLLGACSFHGNVSIAERVT R+LNMEGAYGGDYVLMSNIFAAAGK+GDAE+WRR
Sbjct: 440 NVVIWRTLLGACSFHGNVSIAERVTQRLLNMEGAYGGDYVLMSNIFAAAGKYGDAEKWRR 499

Query: 481 LMDSNNSSKIPGQSLV 497
           LMDS+N SKIPG+SLV
Sbjct: 500 LMDSSNFSKIPGESLV 514

BLAST of Lsi01G016550 vs. NCBI nr
Match: XP_016899586.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g09220, mitochondrial [Cucumis melo] >KAA0060134.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 872.5 bits (2253), Expect = 1.8e-249
Identity = 438/496 (88.31%), Postives = 458/496 (92.34%), Query Frame = 0

Query: 1   MQSLWKGCKFFSSQTSSAFENLQSLSFSSSLQIKSISPSAATSNSLRRSPPLLISQVIRY 60
           M  LWKGCKF SSQ+SS F+NLQ LSFSS LQIKS SPSAA S+SL  SP  LISQV +Y
Sbjct: 1   MHCLWKGCKFISSQSSSTFQNLQFLSFSSFLQIKSFSPSAA-SHSLCFSPSFLISQVFKY 60

Query: 61  ATTHKATQQIRSFIITSGLLLNATTNFILLFNTLLHCYPLYQPLRRIPHIPPSYDTFAYS 120
           ATTHKA QQIRSFII SGLLLNATTNFILL NTLLHCYPLYQPLR+ P IPPSYDTFAYS
Sbjct: 61  ATTHKAAQQIRSFIIASGLLLNATTNFILLCNTLLHCYPLYQPLRQFPRIPPSYDTFAYS 120

Query: 121 FLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDR 180
           FL HS ADLEL GPG QLHALT K+GFPSHVYVQTAILRMYA+SGFLL ALKVFDEMPDR
Sbjct: 121 FLFHSCADLELIGPGFQLHALTFKLGFPSHVYVQTAILRMYASSGFLLDALKVFDEMPDR 180

Query: 181 SSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMV 240
           SSVTWNVLITGLVKLGEL RAR VFDQMPM+NVVSWTAIIDGYTRLNRHEEAA LFWRMV
Sbjct: 181 SSVTWNVLITGLVKLGELRRAREVFDQMPMQNVVSWTAIIDGYTRLNRHEEAAGLFWRMV 240

Query: 241 AHYGMEPTEITLLTIFPSISNLGGLKICQSVHAYAEKKGFNVSDVRISNSLIDCYAKCGC 300
           AHYGMEPTEITLLTIFPSISNLG LKICQSVHAYAEKKGF VSDVR++NSLIDCYAKCGC
Sbjct: 241 AHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEKKGFKVSDVRVANSLIDCYAKCGC 300

Query: 301 IDSASRVFEEMSAERKNLVSWTSIISGLTMHGMGKEAMESFEIMEKEGQEPNRVTFLSII 360
           I+SAS+VFEEMSAERKNLVSWTSIISG TMHGMGKEAMESFEIM KEG EPNRVTFLSI+
Sbjct: 301 INSASKVFEEMSAERKNLVSWTSIISGFTMHGMGKEAMESFEIMVKEGHEPNRVTFLSIV 360

Query: 361 SACSHGGLVEEGLEFFKKMVDEYQIEPDIMHYGGLIDMLGRAGKLEEAEKIALEIPTEIA 420
           SACSHGGLVEEGLEFFKKMV EYQI+PDIMHYG LIDMLGRAG++EEAEKIALEIP EIA
Sbjct: 361 SACSHGGLVEEGLEFFKKMVAEYQIKPDIMHYGSLIDMLGRAGRIEEAEKIALEIPKEIA 420

Query: 421 NVVVWRTLLGACSFHGNVSIAERVTWRILNMEGAYGGDYVLMSNIFAAAGKFGDAERWRR 480
           NVV+WRTLLGACSFHGNVS+AERVT RILNMEGAYGGDYVLMSNIFAAAGK+GDAERWRR
Sbjct: 421 NVVIWRTLLGACSFHGNVSMAERVTQRILNMEGAYGGDYVLMSNIFAAAGKYGDAERWRR 480

Query: 481 LMDSNNSSKIPGQSLV 497
            MDS+N SKIPGQSLV
Sbjct: 481 SMDSSNFSKIPGQSLV 495

BLAST of Lsi01G016550 vs. NCBI nr
Match: TYK08449.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 870.2 bits (2247), Expect = 8.8e-249
Identity = 437/496 (88.10%), Postives = 457/496 (92.14%), Query Frame = 0

Query: 1   MQSLWKGCKFFSSQTSSAFENLQSLSFSSSLQIKSISPSAATSNSLRRSPPLLISQVIRY 60
           M  LWKGCKF SSQ+SS F+NLQ LSFSS LQIKS SPSAA S+SL  SP  LISQV +Y
Sbjct: 1   MHCLWKGCKFISSQSSSTFQNLQFLSFSSFLQIKSFSPSAA-SHSLCFSPSFLISQVFKY 60

Query: 61  ATTHKATQQIRSFIITSGLLLNATTNFILLFNTLLHCYPLYQPLRRIPHIPPSYDTFAYS 120
           ATTHKA QQIRSFII SGLLLNATTNFILL NTLLHCYPLYQPLR+ P IPPSYDTFAYS
Sbjct: 61  ATTHKAAQQIRSFIIASGLLLNATTNFILLCNTLLHCYPLYQPLRQFPRIPPSYDTFAYS 120

Query: 121 FLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDR 180
           FL HS ADLEL GPG QLHALT K+GFPSHVYVQTAILRMYA+SGFLL ALKVFDEMPDR
Sbjct: 121 FLFHSCADLELIGPGFQLHALTFKLGFPSHVYVQTAILRMYASSGFLLDALKVFDEMPDR 180

Query: 181 SSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMV 240
           SSVTWNVLITGLVKLGEL RAR VFDQMPM+NVVSWTAIIDGYTRLNRHEEAA LFWRMV
Sbjct: 181 SSVTWNVLITGLVKLGELRRAREVFDQMPMQNVVSWTAIIDGYTRLNRHEEAAGLFWRMV 240

Query: 241 AHYGMEPTEITLLTIFPSISNLGGLKICQSVHAYAEKKGFNVSDVRISNSLIDCYAKCGC 300
           AHYGMEPTEITLLTIFPSISNLG LKICQSVHAYAEKKGF VSDVR++NSLIDCYAKCGC
Sbjct: 241 AHYGMEPTEITLLTIFPSISNLGALKICQSVHAYAEKKGFKVSDVRVANSLIDCYAKCGC 300

Query: 301 IDSASRVFEEMSAERKNLVSWTSIISGLTMHGMGKEAMESFEIMEKEGQEPNRVTFLSII 360
           I+SAS+VFEEMSAERKNLVSWTSIISG TMHGMGKEAMESFEIM KEG EPNRVTFLSI+
Sbjct: 301 INSASKVFEEMSAERKNLVSWTSIISGFTMHGMGKEAMESFEIMVKEGHEPNRVTFLSIV 360

Query: 361 SACSHGGLVEEGLEFFKKMVDEYQIEPDIMHYGGLIDMLGRAGKLEEAEKIALEIPTEIA 420
           SACSHGGLVEEGLEF KKMV EYQI+PDIMHYG LIDMLGRAG++EEAEKIALEIP EIA
Sbjct: 361 SACSHGGLVEEGLEFIKKMVAEYQIKPDIMHYGSLIDMLGRAGRIEEAEKIALEIPKEIA 420

Query: 421 NVVVWRTLLGACSFHGNVSIAERVTWRILNMEGAYGGDYVLMSNIFAAAGKFGDAERWRR 480
           NVV+WRTLLGACSFHGNVS+AERVT RILNMEGAYGGDYVLMSNIFAAAGK+GDAERWRR
Sbjct: 421 NVVIWRTLLGACSFHGNVSMAERVTQRILNMEGAYGGDYVLMSNIFAAAGKYGDAERWRR 480

Query: 481 LMDSNNSSKIPGQSLV 497
            MDS+N SKIPGQSLV
Sbjct: 481 SMDSSNFSKIPGQSLV 495

BLAST of Lsi01G016550 vs. NCBI nr
Match: XP_004147552.1 (pentatricopeptide repeat-containing protein At1g09220, mitochondrial [Cucumis sativus] >XP_031740359.1 pentatricopeptide repeat-containing protein At1g09220, mitochondrial [Cucumis sativus] >XP_031740360.1 pentatricopeptide repeat-containing protein At1g09220, mitochondrial [Cucumis sativus] >XP_031740361.1 pentatricopeptide repeat-containing protein At1g09220, mitochondrial [Cucumis sativus] >XP_031740362.1 pentatricopeptide repeat-containing protein At1g09220, mitochondrial [Cucumis sativus] >XP_031740363.1 pentatricopeptide repeat-containing protein At1g09220, mitochondrial [Cucumis sativus] >XP_031740364.1 pentatricopeptide repeat-containing protein At1g09220, mitochondrial [Cucumis sativus] >XP_031740365.1 pentatricopeptide repeat-containing protein At1g09220, mitochondrial [Cucumis sativus] >KGN53956.1 hypothetical protein Csa_021565 [Cucumis sativus])

HSP 1 Score: 862.1 bits (2226), Expect = 2.4e-246
Identity = 431/496 (86.90%), Postives = 458/496 (92.34%), Query Frame = 0

Query: 1   MQSLWKGCKFFSSQTSSAFENLQSLSFSSSLQIKSISPSAATSNSLRRSPPLLISQVIRY 60
           M SLWKGCKFFS ++SS  +NLQ LSFSS LQIKS+SPSAA S+ LR S   LISQVI+Y
Sbjct: 1   MHSLWKGCKFFSPRSSSTSQNLQFLSFSSFLQIKSLSPSAA-SDPLRCSSSFLISQVIKY 60

Query: 61  ATTHKATQQIRSFIITSGLLLNATTNFILLFNTLLHCYPLYQPLRRIPHIPPSYDTFAYS 120
           ATTHKATQQIRSFIITSGLLLNAT NFILL NTLLHCYPLYQPLR+ P IPPSYDTFAYS
Sbjct: 61  ATTHKATQQIRSFIITSGLLLNATANFILLCNTLLHCYPLYQPLRQFPRIPPSYDTFAYS 120

Query: 121 FLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDR 180
           FLLHS ADLEL GPG QLHALT K+GFPSHVYVQTA+LRMYAASGFLL A+KVFDEMPDR
Sbjct: 121 FLLHSCADLELIGPGFQLHALTFKLGFPSHVYVQTAVLRMYAASGFLLDAMKVFDEMPDR 180

Query: 181 SSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMV 240
           SSVTWNVLITGLVK GEL RAR VFDQMPMR VVSWTAIIDGYTRLNRHEEAA LFWRMV
Sbjct: 181 SSVTWNVLITGLVKFGELKRARDVFDQMPMRTVVSWTAIIDGYTRLNRHEEAAGLFWRMV 240

Query: 241 AHYGMEPTEITLLTIFPSISNLGGLKICQSVHAYAEKKGFNVSDVRISNSLIDCYAKCGC 300
           AH+GMEP E+TLLTIFP+ISNLG LK+CQSVHAYAEKKGF VSDVRI+NSLIDCYAKCGC
Sbjct: 241 AHFGMEPNEVTLLTIFPAISNLGALKLCQSVHAYAEKKGFKVSDVRIANSLIDCYAKCGC 300

Query: 301 IDSASRVFEEMSAERKNLVSWTSIISGLTMHGMGKEAMESFEIMEKEGQEPNRVTFLSII 360
           I+SAS+VFEEMSAE KNLVSWTSIISG TMHGMGKEAMESFEIMEKEG EPNRVTFLSI+
Sbjct: 301 INSASKVFEEMSAEIKNLVSWTSIISGFTMHGMGKEAMESFEIMEKEGHEPNRVTFLSIV 360

Query: 361 SACSHGGLVEEGLEFFKKMVDEYQIEPDIMHYGGLIDMLGRAGKLEEAEKIALEIPTEIA 420
           SACSHGGLVEEGLEFF+KMV EYQI+PDIMHYG LIDMLGRAG++EEAEKIALEIP EIA
Sbjct: 361 SACSHGGLVEEGLEFFEKMVAEYQIKPDIMHYGSLIDMLGRAGRIEEAEKIALEIPKEIA 420

Query: 421 NVVVWRTLLGACSFHGNVSIAERVTWRILNMEGAYGGDYVLMSNIFAAAGKFGDAERWRR 480
           +VV+WRTLLGACSFHGNVS+AERVT RILNMEGAYGGDYVLMSNIFAAAGK+GDAERWRR
Sbjct: 421 SVVIWRTLLGACSFHGNVSMAERVTQRILNMEGAYGGDYVLMSNIFAAAGKYGDAERWRR 480

Query: 481 LMDSNNSSKIPGQSLV 497
           LMDS+  SKIPGQSLV
Sbjct: 481 LMDSSKFSKIPGQSLV 495

BLAST of Lsi01G016550 vs. NCBI nr
Match: XP_023544594.1 (pentatricopeptide repeat-containing protein At1g09220, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 851.3 bits (2198), Expect = 4.2e-243
Identity = 424/496 (85.48%), Postives = 454/496 (91.53%), Query Frame = 0

Query: 1   MQSLWKGCKFFSSQTSSAFENLQSLSFSSSLQIKSISPSAATSNSLRRSPPLLISQVIRY 60
           MQSLWK CKF S+Q+ S F++         LQ  SISPSAA  +     PPLLISQ+I+Y
Sbjct: 1   MQSLWKRCKFLSAQSFSPFQH---------LQFYSISPSAAYKSLRHSPPPLLISQLIKY 60

Query: 61  ATTHKATQQIRSFIITSGLLLNATTNFILLFNTLLHCYPLYQPLRRIPHIPPSYDTFAYS 120
           AT+HKATQQIRSFIITSGLLLNAT NFILL NTLLHCYPLYQPLRRIPH PPSYDTFAYS
Sbjct: 61  ATSHKATQQIRSFIITSGLLLNATANFILLCNTLLHCYPLYQPLRRIPHTPPSYDTFAYS 120

Query: 121 FLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDR 180
           FLLHS ADLEL GPGLQLHALTLKVGFPSHVYVQTAI+RMYAA GFL+ ALKVFDEMPDR
Sbjct: 121 FLLHSCADLELTGPGLQLHALTLKVGFPSHVYVQTAIVRMYAACGFLVDALKVFDEMPDR 180

Query: 181 SSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMV 240
           +SVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFW+MV
Sbjct: 181 NSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWKMV 240

Query: 241 AHYGMEPTEITLLTIFPSISNLGGLKICQSVHAYAEKKGFNVSDVRISNSLIDCYAKCGC 300
           A YGMEPTEITLLTIFPSISNLG LKIC SVHAYAEKKGF VSDVRI+NSLIDCY+KCGC
Sbjct: 241 ADYGMEPTEITLLTIFPSISNLGALKICHSVHAYAEKKGFKVSDVRIANSLIDCYSKCGC 300

Query: 301 IDSASRVFEEMSAERKNLVSWTSIISGLTMHGMGKEAMESFEIMEKEGQEPNRVTFLSII 360
           I+SAS VFEEMSAERKNLV+WTSII+G TMHGMGKEA+ESFE M+ EG EPNRVTFLSI+
Sbjct: 301 INSASMVFEEMSAERKNLVTWTSIITGFTMHGMGKEAVESFERMKNEGHEPNRVTFLSIL 360

Query: 361 SACSHGGLVEEGLEFFKKMVDEYQIEPDIMHYGGLIDMLGRAGKLEEAEKIALEIPTEIA 420
           SACSHGGLVEEGLEFFKKMV+EYQIEPDIMHYG LIDMLGRAG++EEAE+IALEIP EIA
Sbjct: 361 SACSHGGLVEEGLEFFKKMVEEYQIEPDIMHYGSLIDMLGRAGRVEEAERIALEIPMEIA 420

Query: 421 NVVVWRTLLGACSFHGNVSIAERVTWRILNMEGAYGGDYVLMSNIFAAAGKFGDAERWRR 480
           NVV+WRTLLGACSFHGNVSIAERVT RIL+MEGAYGGDYVLMSNIFAAAGK+GDAE+WRR
Sbjct: 421 NVVIWRTLLGACSFHGNVSIAERVTRRILDMEGAYGGDYVLMSNIFAAAGKYGDAEKWRR 480

Query: 481 LMDSNNSSKIPGQSLV 497
           LMDS+ SSKIPGQSL+
Sbjct: 481 LMDSSKSSKIPGQSLL 487

BLAST of Lsi01G016550 vs. TAIR 10
Match: AT1G09220.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 459.5 bits (1181), Expect = 3.3e-129
Identity = 239/460 (51.96%), Postives = 312/460 (67.83%), Query Frame = 0

Query: 59  RYATTHKATQQIRSFIITSGLLL---NATTNFILLFNTLLHCYP----------LYQPLR 118
           +Y +  K   Q+ S   TSG LL      +  + LFN LL CY           LY  L+
Sbjct: 45  KYESNLKIIHQLHSHFTTSGFLLLHQKQNSGKLFLFNPLLRCYSLGETPLHAYFLYDQLQ 104

Query: 119 RIPHIP------PSYDTFAYSFLLHSSADLELAG--PGLQLHALTLKVGFPSHVYVQTAI 178
           R+  +       P +D+F Y FLL +S++        G+ LH LTLK+GF SHVYVQTA+
Sbjct: 105 RLHFLSDHNKSLPPFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTAL 164

Query: 179 LRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGRARAVFDQMPMRNVVSWT 238
           + MY   G ++ A KVFDEMP+R+ VTWNV+ITGL  LG+  +A    ++MP R VVSWT
Sbjct: 165 VGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWT 224

Query: 239 AIIDGYTRLNRHEEAADLFWRMVAHYGMEPTEITLLTIFPSISNLGGLKICQSVHAYAEK 298
            IIDGY R+++ +EA  LF RMVA   ++P EIT+L I P++ NLG LK+C SVHAY  K
Sbjct: 225 TIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGK 284

Query: 299 KGFNVSDVRISNSLIDCYAKCGCIDSASRVFEEMSAERKNLVSWTSIISGLTMHGMGKEA 358
           +GF   D+R++NSLID YAKCGCI SA + F E+   RKNLVSWT++IS   +HGMGKEA
Sbjct: 285 RGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEA 344

Query: 359 MESFEIMEKEGQEPNRVTFLSIISACSHGGLVEEG-LEFFKKMVDEYQIEPDIMHYGGLI 418
           +  F+ ME+ G +PNRVT +S+++ACSHGGL EE  LEFF  MV+EY+I PD+ HYG L+
Sbjct: 345 VSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLV 404

Query: 419 DMLGRAGKLEEAEKIALEIPTEIANVVVWRTLLGACSFHGNVSIAERVTWRILNMEGAYG 478
           DML R G+LEEAEKIALEIP E    VVWR LLGACS + +  +AERVT +++ +E ++G
Sbjct: 405 DMLRRKGRLEEAEKIALEIPIE-EKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHG 464

Query: 479 GDYVLMSNIFAAAGKFGDAERWRRLMDSNNSSKIPGQSLV 497
           GDYVLMSNIF   G+F DA+R+R+ MD    +K+PG S V
Sbjct: 465 GDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503

BLAST of Lsi01G016550 vs. TAIR 10
Match: AT5G08510.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 301.6 bits (771), Expect = 1.2e-81
Identity = 163/414 (39.37%), Postives = 242/414 (58.45%), Query Frame = 0

Query: 90  LFNTLLHCYPL-YQP--------LRRIPHIPPSYDTFAYSFLLHSSADLELAGPGLQLHA 149
           L+N L+  Y + +QP        L     + PS+ TF  +F+  +SA    A P   LH+
Sbjct: 49  LYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTF--NFIFAASASFSSARPLRLLHS 108

Query: 150 LTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNVLITGLVKLGELGR 209
              + GF S  +  T ++  YA  G L  A +VFDEM  R    WN +ITG  + G++  
Sbjct: 109 QFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKA 168

Query: 210 ARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMVAHYGMEPTEITLLTIFPSIS 269
           A  +FD MP +NV SWT +I G+++   + EA  +F  M     ++P  IT++++ P+ +
Sbjct: 169 AMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACA 228

Query: 270 NLGGLKICQSVHAYAEKKGFNVSDVRISNSLIDCYAKCGCIDSASRVFEEMSAERKNLVS 329
           NLG L+I + +  YA + GF   ++ + N+ I+ Y+KCG ID A R+FEE+  +R NL S
Sbjct: 229 NLGELEIGRRLEGYARENGF-FDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQR-NLCS 288

Query: 330 WTSIISGLTMHGMGKEAMESFEIMEKEGQEPNRVTFLSIISACSHGGLVEEGLEFFKKMV 389
           W S+I  L  HG   EA+  F  M +EG++P+ VTF+ ++ AC HGG+V +G E FK M 
Sbjct: 289 WNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSME 348

Query: 390 DEYQIEPDIMHYGGLIDMLGRAGKLEEAEKIALEIPTEIANVVVWRTLLGACSFHGNVSI 449
           + ++I P + HYG +ID+LGR GKL+EA  +   +P +  + VVW TLLGACSFHGNV I
Sbjct: 349 EVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMK-PDAVVWGTLLGACSFHGNVEI 408

Query: 450 AERVTWRILNMEGAYGGDYVLMSNIFAAAGKFGDAERWRRLMDSNNSSKIPGQS 495
           AE  +  +  +E    G+ V+MSNI+AA  K+    R R+LM     +K  G S
Sbjct: 409 AEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYS 457

BLAST of Lsi01G016550 vs. TAIR 10
Match: AT2G20540.1 (mitochondrial editing factor 21 )

HSP 1 Score: 300.8 bits (769), Expect = 2.0e-81
Identity = 165/429 (38.46%), Postives = 259/429 (60.37%), Query Frame = 0

Query: 80  LLNATTN-FILLFNTLLHCY---PLY--------QPLRRIPHIPPSYDTFAYSFLLHSSA 139
           L N  +N  + L+N+++  Y    LY        Q LR+   +P   D F + F+  S A
Sbjct: 64  LFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELP---DRFTFPFMFKSCA 123

Query: 140 DLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVFDEMPDRSSVTWNV 199
            L     G Q+H    K G   HV  + A++ MY     L+ A KVFDEM +R  ++WN 
Sbjct: 124 SLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNS 183

Query: 200 LITGLVKLGELGRARAVFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMVAHYGMEP 259
           L++G  +LG++ +A+ +F  M  + +VSWTA+I GYT +  + EA D F+R +   G+EP
Sbjct: 184 LLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMD-FFREMQLAGIEP 243

Query: 260 TEITLLTIFPSISNLGGLKICQSVHAYAEKKGFNVSDVRISNSLIDCYAKCGCIDSASRV 319
            EI+L+++ PS + LG L++ + +H YAE++GF +    + N+LI+ Y+KCG I  A ++
Sbjct: 244 DEISLISVLPSCAQLGSLELGKWIHLYAERRGF-LKQTGVCNALIEMYSKCGVISQAIQL 303

Query: 320 FEEMSAERKNLVSWTSIISGLTMHGMGKEAMESFEIMEKEGQEPNRVTFLSIISACSHGG 379
           F +M  E K+++SW+++ISG   HG    A+E+F  M++   +PN +TFL ++SACSH G
Sbjct: 304 FGQM--EGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVG 363

Query: 380 LVEEGLEFFKKMVDEYQIEPDIMHYGGLIDMLGRAGKLEEAEKIALEIPTEIANVVVWRT 439
           + +EGL +F  M  +YQIEP I HYG LID+L RAGKLE A +I   +P +  +  +W +
Sbjct: 364 MWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMK-PDSKIWGS 423

Query: 440 LLGACSFHGNVSIAERVTWRILNMEGAYGGDYVLMSNIFAAAGKFGDAERWRRLMDSNNS 497
           LL +C   GN+ +A      ++ +E    G+YVL++NI+A  GK+ D  R R+++ + N 
Sbjct: 424 LLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENM 483

BLAST of Lsi01G016550 vs. TAIR 10
Match: AT1G74630.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 288.5 bits (737), Expect = 1.0e-77
Identity = 151/413 (36.56%), Postives = 233/413 (56.42%), Query Frame = 0

Query: 115 DTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVF 174
           D+F+++F++ +  +      G Q+H   LK G  SH++V T ++ MY   G +  A KVF
Sbjct: 105 DSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVF 164

Query: 175 DEMPD-------------------------------RSSVTWNVLITGLVKLGELGRARA 234
           DEM                                 R+  +WNV++ G +K GEL  A+ 
Sbjct: 165 DEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKR 224

Query: 235 VFDQMPMRNVVSWTAIIDGYTRLNRHEEAADLFWRMVAHYGMEPTEITLLTIFPSISNLG 294
           +F +MP R+ VSW+ +I G        E+  L++R +   GM P E++L  +  + S  G
Sbjct: 225 IFSEMPHRDDVSWSTMIVGIAHNGSFNESF-LYFRELQRAGMSPNEVSLTGVLSACSQSG 284

Query: 295 GLKICQSVHAYAEKKGFNVSDVRISNSLIDCYAKCGCIDSASRVFEEMSAERKNLVSWTS 354
             +  + +H + EK G++   V ++N+LID Y++CG +  A  VFE M  E++ +VSWTS
Sbjct: 285 SFEFGKILHGFVEKAGYSWI-VSVNNALIDMYSRCGNVPMARLVFEGMQ-EKRCIVSWTS 344

Query: 355 IISGLTMHGMGKEAMESFEIMEKEGQEPNRVTFLSIISACSHGGLVEEGLEFFKKMVDEY 414
           +I+GL MHG G+EA+  F  M   G  P+ ++F+S++ ACSH GL+EEG ++F +M   Y
Sbjct: 345 MIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVY 404

Query: 415 QIEPDIMHYGGLIDMLGRAGKLEEAEKIALEIPTEIANVVVWRTLLGACSFHGNVSIAER 474
            IEP+I HYG ++D+ GR+GKL++A     ++P      +VWRTLLGACS HGN+ +AE+
Sbjct: 405 HIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIP-PTAIVWRTLLGACSSHGNIELAEQ 464

Query: 475 VTWRILNMEGAYGGDYVLMSNIFAAAGKFGDAERWRRLMDSNNSSKIPGQSLV 497
           V  R+  ++    GD VL+SN +A AGK+ D    R+ M      K    SLV
Sbjct: 465 VKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLV 513

BLAST of Lsi01G016550 vs. TAIR 10
Match: AT5G56310.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 287.3 bits (734), Expect = 2.3e-77
Identity = 147/384 (38.28%), Postives = 233/384 (60.68%), Query Frame = 0

Query: 115 DTFAYSFLLHSSADLELAGPGLQLHALTLKVGFPSHVYVQTAILRMYAASGFLLHALKVF 174
           DTF + F+L  +  +     G Q+H   +  GF S V+V T +++MY + G L  A K+F
Sbjct: 115 DTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMF 174

Query: 175 DEMPDRSSVTWNVLITGLVKLGELGRARAVFDQMP--MRNVVSWTAIIDGYTRLNRHEEA 234
           DEM  +    WN L+ G  K+GE+  AR++ + MP  +RN VSWT +I GY +  R  EA
Sbjct: 175 DEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEA 234

Query: 235 ADLFWRMVAHYGMEPTEITLLTIFPSISNLGGLKICQSVHAYAEKKGFNVSDVRISNSLI 294
            ++F RM+    +EP E+TLL +  + ++LG L++ + + +Y + +G N + V ++N++I
Sbjct: 235 IEVFQRMLME-NVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRA-VSLNNAVI 294

Query: 295 DCYAKCGCIDSASRVFEEMSAERKNLVSWTSIISGLTMHGMGKEAMESFEIMEKEGQEPN 354
           D YAK G I  A  VFE      +N+V+WT+II+GL  HG G EA+  F  M K G  PN
Sbjct: 295 DMYAKSGNITKALDVFE--CVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPN 354

Query: 355 RVTFLSIISACSHGGLVEEGLEFFKKMVDEYQIEPDIMHYGGLIDMLGRAGKLEEAEKIA 414
            VTF++I+SACSH G V+ G   F  M  +Y I P+I HYG +ID+LGRAGKL EA+++ 
Sbjct: 355 DVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVI 414

Query: 415 LEIPTEIANVVVWRTLLGACSFHGNVSIAERVTWRILNMEGAYGGDYVLMSNIFAAAGKF 474
             +P + AN  +W +LL A + H ++ + ER    ++ +E    G+Y+L++N+++  G++
Sbjct: 415 KSMPFK-ANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRW 474

Query: 475 GDAERWRRLMDSNNSSKIPGQSLV 497
            ++   R +M      K+ G+S +
Sbjct: 475 DESRMMRNMMKGIGVKKMAGESSI 493

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q680Z74.7e-12851.96Pentatricopeptide repeat-containing protein At1g09220, mitochondrial OS=Arabidop... [more]
Q9FNN71.6e-8039.37Pentatricopeptide repeat-containing protein At5g08510 OS=Arabidopsis thaliana OX... [more]
Q9SIL52.8e-8038.46Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX... [more]
Q9CA541.4e-7636.56Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana OX... [more]
Q9FMA13.2e-7638.28Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A5A7UYK18.6e-25088.31Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S4DUC68.6e-25088.31pentatricopeptide repeat-containing protein At1g09220, mitochondrial OS=Cucumis ... [more]
A0A5D3CDM64.3e-24988.10Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A0A0L1E81.2e-24686.90Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G193260 PE=4 SV=1[more]
A0A6J1IS714.6e-24385.69pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like OS=Cuc... [more]
Match NameE-valueIdentityDescription
XP_038882176.18.5e-26091.33pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like isofor... [more]
XP_016899586.11.8e-24988.31PREDICTED: pentatricopeptide repeat-containing protein At1g09220, mitochondrial ... [more]
TYK08449.18.8e-24988.10pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa][more]
XP_004147552.12.4e-24686.90pentatricopeptide repeat-containing protein At1g09220, mitochondrial [Cucumis sa... [more]
XP_023544594.14.2e-24385.48pentatricopeptide repeat-containing protein At1g09220, mitochondrial [Cucurbita ... [more]
Match NameE-valueIdentityDescription
AT1G09220.13.3e-12951.96Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G08510.11.2e-8139.37Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G20540.12.0e-8138.46mitochondrial editing factor 21 [more]
AT1G74630.11.0e-7736.56Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G56310.12.3e-7738.28Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 316..364
e-value: 5.2E-10
score: 39.4
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 392..411
e-value: 0.11
score: 12.8
coord: 289..312
e-value: 1.9E-5
score: 24.6
coord: 183..212
e-value: 1.0E-5
score: 25.4
coord: 214..240
e-value: 1.7E-5
score: 24.8
coord: 155..180
e-value: 0.026
score: 14.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 319..352
e-value: 0.0013
score: 16.7
coord: 183..213
e-value: 3.5E-6
score: 24.8
coord: 354..388
e-value: 5.7E-5
score: 21.0
coord: 289..314
e-value: 2.3E-5
score: 22.2
coord: 214..248
e-value: 8.9E-5
score: 20.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 181..215
score: 10.621557
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 284..314
score: 9.382931
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 317..351
score: 10.764054
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 352..382
score: 9.097937
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 255..370
e-value: 1.7E-23
score: 84.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 100..242
e-value: 3.0E-22
score: 81.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 371..493
e-value: 4.9E-12
score: 47.9
NoneNo IPR availablePANTHERPTHR47924:SF2PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 53..196
NoneNo IPR availablePANTHERPTHR47924:SF2PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 195..496
NoneNo IPR availablePANTHERPTHR47924PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 53..196
NoneNo IPR availablePANTHERPTHR47924PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 195..496

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G016550.1Lsi01G016550.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding