Lsi01G015830 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi01G015830
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDehydration-responsive element-binding protein 2A
Locationchr01: 14008972 .. 14010235 (-)
RNA-Seq ExpressionLsi01G015830
SyntenyLsi01G015830
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CGACAAGTCGAGTGGGTAAAAACCACATGTCGTCTTAGAGAGAGCATACTAACTTAGCTTAAAAGCTGGATCCCTTTGTTGGTGAAAGGATGATAAATGTGAATCGGCCATGGAAGACGATTCCTTGCAGAAGGTTGCGATTTCAGGCCCAATCTTAGCCTCTTTGATCCAACGCGTCTCCTCCTCCTCCGGCGCCGTCGACGGCCTTCTTTTCGGCCATGTCTCCGACGTTACCCCCTTATCCCTCTCCGATGATTCATCTTCTTCAACTGACATCCAACCATCAGTACGCGTCGCCACTGTCACCGGATTTCTTTGCTCCGGTACCACCAATAGCTTCTACGACTCTCTCGGACGTGTAGAATCGAAATCGCTTAACCGCCTTCTCGACCGACACCAGACCGACGGCCAAGCTCAACCCCACGATTCTTTGCTAGGTTGGTTTGCCGGCCGCCGGAGGACTCAGCTTCGACCTTCCATGCGTGAATACTTAGTGAGTTCTTCTTTATCTTCGATGAAGCAATTGTCGTTTCCTGTTAAAGACGCTGTGAATCCCACCAATCTAATCCCTAGTGTGTTTATGCTTCTGACTACGCCGCTATCCGATCAAATTATCCACACACATGAGTACCGCGCTTTTCAATTTCGGTCTTCCAATGAGTTCTTTGAGCCGAAATCGATTGACATTGTGAATATTGGGCCGGCATTTCGTGGTCACTATGGATCGTTTACCCCTAATTCTCCTTTCCCCCATTTGCTCTGCGAGACGAGAGCTTCTCCGATGAATGAGGATAAGAATGATGAGAATTTGACTCTGATGAAGCAAAACTCGAAAGATCAGAAGCAAATGAATGTGTGCGCTGAAGGGTTCGAGGTTGGGAACTTGACCCGGTTACTGGGTTCTGAGGCAGCAAATTATACTGCTGGGTTGGAAGATTTGTACGAAAAAATGCTTGTTAAGACTGAGTACTTGGCGCGGCTCGTTGAGAAGAGCTCTGCTCAGGTTCTTGAGCAGGTATTCAATCGCTTCTATATGAATGAACCCTTGAGGACTAACAGCTAAGATACCAATTATGCGTGCTCGTTAGGTGGATTTTTATGTTTTAATGACTAGTAAATTGTTCTATTGTTTGTCATTGCTTAATGCTCCTCTTGATTGTTCAATTTCTTCAAGGTTTTATGCATAATCTTTCCCATTGTTTTGCAGGAAAACCACAACAGGAAGTTAAGATATAAAGTTGCGAGGTACCCTGGATTTGAGTAA

mRNA sequence

CGACAAGTCGAGTGGGTAAAAACCACATGTCGTCTTAGAGAGAGCATACTAACTTAGCTTAAAAGCTGGATCCCTTTGTTGGTGAAAGGATGATAAATGTGAATCGGCCATGGAAGACGATTCCTTGCAGAAGGTTGCGATTTCAGGCCCAATCTTAGCCTCTTTGATCCAACGCGTCTCCTCCTCCTCCGGCGCCGTCGACGGCCTTCTTTTCGGCCATGTCTCCGACGTTACCCCCTTATCCCTCTCCGATGATTCATCTTCTTCAACTGACATCCAACCATCAGTACGCGTCGCCACTGTCACCGGATTTCTTTGCTCCGGTACCACCAATAGCTTCTACGACTCTCTCGGACGTGTAGAATCGAAATCGCTTAACCGCCTTCTCGACCGACACCAGACCGACGGCCAAGCTCAACCCCACGATTCTTTGCTAGGTTGGTTTGCCGGCCGCCGGAGGACTCAGCTTCGACCTTCCATGCGTGAATACTTAGTGAGTTCTTCTTTATCTTCGATGAAGCAATTGTCGTTTCCTGTTAAAGACGCTGTGAATCCCACCAATCTAATCCCTAGTGTGTTTATGCTTCTGACTACGCCGCTATCCGATCAAATTATCCACACACATGAGTACCGCGCTTTTCAATTTCGGTCTTCCAATGAGTTCTTTGAGCCGAAATCGATTGACATTGTGAATATTGGGCCGGCATTTCGTGGTCACTATGGATCGTTTACCCCTAATTCTCCTTTCCCCCATTTGCTCTGCGAGACGAGAGCTTCTCCGATGAATGAGGATAAGAATGATGAGAATTTGACTCTGATGAAGCAAAACTCGAAAGATCAGAAGCAAATGAATGTGTGCGCTGAAGGGTTCGAGGTTGGGAACTTGACCCGGTTACTGGGTTCTGAGGCAGCAAATTATACTGCTGGGTTGGAAGATTTGTACGAAAAAATGCTTGTTAAGACTGAGTACTTGGCGCGGCTCGTTGAGAAGAGCTCTGCTCAGGTTCTTGAGCAGGAAAACCACAACAGGAAGTTAAGATATAAAGTTGCGAGGTACCCTGGATTTGAGTAA

Coding sequence (CDS)

ATGGAAGACGATTCCTTGCAGAAGGTTGCGATTTCAGGCCCAATCTTAGCCTCTTTGATCCAACGCGTCTCCTCCTCCTCCGGCGCCGTCGACGGCCTTCTTTTCGGCCATGTCTCCGACGTTACCCCCTTATCCCTCTCCGATGATTCATCTTCTTCAACTGACATCCAACCATCAGTACGCGTCGCCACTGTCACCGGATTTCTTTGCTCCGGTACCACCAATAGCTTCTACGACTCTCTCGGACGTGTAGAATCGAAATCGCTTAACCGCCTTCTCGACCGACACCAGACCGACGGCCAAGCTCAACCCCACGATTCTTTGCTAGGTTGGTTTGCCGGCCGCCGGAGGACTCAGCTTCGACCTTCCATGCGTGAATACTTAGTGAGTTCTTCTTTATCTTCGATGAAGCAATTGTCGTTTCCTGTTAAAGACGCTGTGAATCCCACCAATCTAATCCCTAGTGTGTTTATGCTTCTGACTACGCCGCTATCCGATCAAATTATCCACACACATGAGTACCGCGCTTTTCAATTTCGGTCTTCCAATGAGTTCTTTGAGCCGAAATCGATTGACATTGTGAATATTGGGCCGGCATTTCGTGGTCACTATGGATCGTTTACCCCTAATTCTCCTTTCCCCCATTTGCTCTGCGAGACGAGAGCTTCTCCGATGAATGAGGATAAGAATGATGAGAATTTGACTCTGATGAAGCAAAACTCGAAAGATCAGAAGCAAATGAATGTGTGCGCTGAAGGGTTCGAGGTTGGGAACTTGACCCGGTTACTGGGTTCTGAGGCAGCAAATTATACTGCTGGGTTGGAAGATTTGTACGAAAAAATGCTTGTTAAGACTGAGTACTTGGCGCGGCTCGTTGAGAAGAGCTCTGCTCAGGTTCTTGAGCAGGAAAACCACAACAGGAAGTTAAGATATAAAGTTGCGAGGTACCCTGGATTTGAGTAA

Protein sequence

MEDDSLQKVAISGPILASLIQRVSSSSGAVDGLLFGHVSDVTPLSLSDDSSSSTDIQPSVRVATVTGFLCSGTTNSFYDSLGRVESKSLNRLLDRHQTDGQAQPHDSLLGWFAGRRRTQLRPSMREYLVSSSLSSMKQLSFPVKDAVNPTNLIPSVFMLLTTPLSDQIIHTHEYRAFQFRSSNEFFEPKSIDIVNIGPAFRGHYGSFTPNSPFPHLLCETRASPMNEDKNDENLTLMKQNSKDQKQMNVCAEGFEVGNLTRLLGSEAANYTAGLEDLYEKMLVKTEYLARLVEKSSAQVLEQENHNRKLRYKVARYPGFE
Homology
[Close]
BLAST of Lsi01G015830 vs. ExPASy TrEMBL
Match: A0A5D3CG44 (Dehydration-responsive element-binding protein 2A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold107G00300 PE=4 SV=1)

HSP 1 Score: 587.8 bits (1514), Expect = 2.7e-164
Identity = 298/320 (93.12%), Postives = 309/320 (96.56%), Query Frame = 0 

Query: 1   MEDDSLQKVAISGPILASLIQRVSSSSGAVDGLLFGHVSDVTPLSLSDDSSSSTDIQPSV 60
           MEDDSLQKVAISGPILASLIQR SSSSGAVDGLLFGHVSDVT LSLSDDSSSSTD QPS+
Sbjct: 1   MEDDSLQKVAISGPILASLIQRFSSSSGAVDGLLFGHVSDVTLLSLSDDSSSSTDTQPSL 60

Query: 61  RVATVTGFLCSGTTNSFYDSLGRVESKSLNRLLDRHQTDGQAQPHDSLLGWFAGRRRTQL 120
           RVATVTGFLCSGTTNSFYDSLGRV+S+SLNRLLDRHQ+DGQAQPHDS LGWF+GRRRTQL
Sbjct: 61  RVATVTGFLCSGTTNSFYDSLGRVDSQSLNRLLDRHQSDGQAQPHDSFLGWFSGRRRTQL 120

Query: 121 RPSMREYLVSSSLSSMKQLSFPVKDAVNPTNLIPSVFMLLTTPLSDQIIHTHEYRAFQFR 180
           RPSMREYLVSSSLSSMKQLSFPVKDAVNPTN IPSVF+LLT+PLSDQIIHTHEYRAFQFR
Sbjct: 121 RPSMREYLVSSSLSSMKQLSFPVKDAVNPTNFIPSVFLLLTSPLSDQIIHTHEYRAFQFR 180

Query: 181 SSNEFFEPKSIDIVNIGPAFRGHYGSFTPNSPFPHLLCETRASPMNEDKNDENLTLMKQN 240
           SSNEFFEPKSIDIVNIGPAFRGHYGSF PNSPFPHL CE RASPMNEDKND+NL +MKQN
Sbjct: 181 SSNEFFEPKSIDIVNIGPAFRGHYGSFIPNSPFPHLPCEMRASPMNEDKNDDNLNMMKQN 240

Query: 241 SKDQKQMNVCAEGFEVGNLTRLLGSEAANYTAGLEDLYEKMLVKTEYLARLVEKSSAQVL 300
           SKDQKQMNVCAEGF+VGNLTRLLGSEAANYTAGLEDLYEKML KTE LARLVE+SSAQVL
Sbjct: 241 SKDQKQMNVCAEGFDVGNLTRLLGSEAANYTAGLEDLYEKMLAKTECLARLVEESSAQVL 300

Query: 301 EQENHNRKLRYKVARYPGFE 321
           EQENHNRKLRYKVARYPGFE
Sbjct: 301 EQENHNRKLRYKVARYPGFE 320

[Close]
BLAST of Lsi01G015830 vs. ExPASy TrEMBL
Match: A0A0A0KY28 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G314410 PE=4 SV=1)

HSP 1 Score: 587.4 bits (1513), Expect = 3.6e-164
Identity = 300/322 (93.17%), Postives = 312/322 (96.89%), Query Frame = 0 

Query: 1   MEDDSLQKVAISGPILASLIQRVSSSSGAVDGLLFGHVSDVTPLSLSDDSSSSTDIQPSV 60
           MEDDSLQKVAISGPILASLIQR SSSSGAVDGLLFGHVSDVTPLSLSDDSSSSTD QPS+
Sbjct: 1   MEDDSLQKVAISGPILASLIQRFSSSSGAVDGLLFGHVSDVTPLSLSDDSSSSTDTQPSL 60

Query: 61  RVATVTGFLCSGTTNSFYDSLGRVESKSLNRLLDRHQTDG--QAQPHDSLLGWFAGRRRT 120
           RVATVTGFLCSG+TNSFYDSLGRV+S+SLNRLLDRHQ+DG  QAQPHDSLLGWF+GRRRT
Sbjct: 61  RVATVTGFLCSGSTNSFYDSLGRVDSQSLNRLLDRHQSDGQAQAQPHDSLLGWFSGRRRT 120

Query: 121 QLRPSMREYLVSSSLSSMKQLSFPVKDAVNPTNLIPSVFMLLTTPLSDQIIHTHEYRAFQ 180
           QLRPSMREYLVSSSLSSMKQLSFPVKDAVNPTNLIPSVF+LLT+PLSDQIIHTHEYRAFQ
Sbjct: 121 QLRPSMREYLVSSSLSSMKQLSFPVKDAVNPTNLIPSVFLLLTSPLSDQIIHTHEYRAFQ 180

Query: 181 FRSSNEFFEPKSIDIVNIGPAFRGHYGSFTPNSPFPHLLCETRASPMNEDKNDENLTLMK 240
           FRSSNEFFEPKSIDIVNIGPAFRGHYGSF PNSPFPHLLCE RASPMNEDKND+NL +MK
Sbjct: 181 FRSSNEFFEPKSIDIVNIGPAFRGHYGSFIPNSPFPHLLCEMRASPMNEDKNDDNLNMMK 240

Query: 241 QNSKDQKQMNVCAEGFEVGNLTRLLGSEAANYTAGLEDLYEKMLVKTEYLARLVEKSSAQ 300
           QNSK QKQMNVCAEGF+VGNLTRLLGSEAANYTAGLEDLYEKML KTE LARLVE+SSAQ
Sbjct: 241 QNSKYQKQMNVCAEGFDVGNLTRLLGSEAANYTAGLEDLYEKMLAKTESLARLVEESSAQ 300

Query: 301 VLEQENHNRKLRYKVARYPGFE 321
           VLEQENHNRKLRYKVARYPGFE
Sbjct: 301 VLEQENHNRKLRYKVARYPGFE 322

[Close]
BLAST of Lsi01G015830 vs. ExPASy TrEMBL
Match: A0A1S3CLG7 (uncharacterized protein LOC103502164 OS=Cucumis melo OX=3656 GN=LOC103502164 PE=4 SV=1)

HSP 1 Score: 585.9 bits (1509), Expect = 1.0e-163
Identity = 297/320 (92.81%), Postives = 308/320 (96.25%), Query Frame = 0 

Query: 1   MEDDSLQKVAISGPILASLIQRVSSSSGAVDGLLFGHVSDVTPLSLSDDSSSSTDIQPSV 60
           MEDDSL KVAISGPILASLIQR SSSSGAVDGLLFGHVSDVT LSLSDDSSSSTD QPS+
Sbjct: 1   MEDDSLHKVAISGPILASLIQRFSSSSGAVDGLLFGHVSDVTLLSLSDDSSSSTDTQPSL 60

Query: 61  RVATVTGFLCSGTTNSFYDSLGRVESKSLNRLLDRHQTDGQAQPHDSLLGWFAGRRRTQL 120
           RVATVTGFLCSGTTNSFYDSLGRV+S+SLNRLLDRHQ+DGQAQPHDS LGWF+GRRRTQL
Sbjct: 61  RVATVTGFLCSGTTNSFYDSLGRVDSQSLNRLLDRHQSDGQAQPHDSFLGWFSGRRRTQL 120

Query: 121 RPSMREYLVSSSLSSMKQLSFPVKDAVNPTNLIPSVFMLLTTPLSDQIIHTHEYRAFQFR 180
           RPSMREYLVSSSLSSMKQLSFPVKDAVNPTN IPSVF+LLT+PLSDQIIHTHEYRAFQFR
Sbjct: 121 RPSMREYLVSSSLSSMKQLSFPVKDAVNPTNFIPSVFLLLTSPLSDQIIHTHEYRAFQFR 180

Query: 181 SSNEFFEPKSIDIVNIGPAFRGHYGSFTPNSPFPHLLCETRASPMNEDKNDENLTLMKQN 240
           SSNEFFEPKSIDIVNIGPAFRGHYGSF PNSPFPHL CE RASPMNEDKND+NL +MKQN
Sbjct: 181 SSNEFFEPKSIDIVNIGPAFRGHYGSFIPNSPFPHLPCEMRASPMNEDKNDDNLNMMKQN 240

Query: 241 SKDQKQMNVCAEGFEVGNLTRLLGSEAANYTAGLEDLYEKMLVKTEYLARLVEKSSAQVL 300
           SKDQKQMNVCAEGF+VGNLTRLLGSEAANYTAGLEDLYEKML KTE LARLVE+SSAQVL
Sbjct: 241 SKDQKQMNVCAEGFDVGNLTRLLGSEAANYTAGLEDLYEKMLAKTECLARLVEESSAQVL 300

Query: 301 EQENHNRKLRYKVARYPGFE 321
           EQENHNRKLRYKVARYPGFE
Sbjct: 301 EQENHNRKLRYKVARYPGFE 320

[Close]
BLAST of Lsi01G015830 vs. ExPASy TrEMBL
Match: A0A5A7T2L9 (Dehydration-responsive element-binding protein 2A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold141G00050 PE=4 SV=1)

HSP 1 Score: 585.9 bits (1509), Expect = 1.0e-163
Identity = 297/320 (92.81%), Postives = 308/320 (96.25%), Query Frame = 0 

Query: 1   MEDDSLQKVAISGPILASLIQRVSSSSGAVDGLLFGHVSDVTPLSLSDDSSSSTDIQPSV 60
           MEDDSL KVAISGPILASLIQR SSSSGAVDGLLFGHVSDVT LSLSDDSSSSTD QPS+
Sbjct: 1   MEDDSLHKVAISGPILASLIQRFSSSSGAVDGLLFGHVSDVTLLSLSDDSSSSTDTQPSL 60

Query: 61  RVATVTGFLCSGTTNSFYDSLGRVESKSLNRLLDRHQTDGQAQPHDSLLGWFAGRRRTQL 120
           RVATVTGFLCSGTTNSFYDSLGRV+S+SLNRLLDRHQ+DGQAQPHDS LGWF+GRRRTQL
Sbjct: 61  RVATVTGFLCSGTTNSFYDSLGRVDSQSLNRLLDRHQSDGQAQPHDSFLGWFSGRRRTQL 120

Query: 121 RPSMREYLVSSSLSSMKQLSFPVKDAVNPTNLIPSVFMLLTTPLSDQIIHTHEYRAFQFR 180
           RPSMREYLVSSSLSSMKQLSFPVKDAVNPTN IPSVF+LLT+PLSDQIIHTHEYRAFQFR
Sbjct: 121 RPSMREYLVSSSLSSMKQLSFPVKDAVNPTNFIPSVFLLLTSPLSDQIIHTHEYRAFQFR 180

Query: 181 SSNEFFEPKSIDIVNIGPAFRGHYGSFTPNSPFPHLLCETRASPMNEDKNDENLTLMKQN 240
           SSNEFFEPKSIDIVNIGPAFRGHYGSF PNSPFPHL CE RASPMNEDKND+NL +MKQN
Sbjct: 181 SSNEFFEPKSIDIVNIGPAFRGHYGSFIPNSPFPHLPCEMRASPMNEDKNDDNLNMMKQN 240

Query: 241 SKDQKQMNVCAEGFEVGNLTRLLGSEAANYTAGLEDLYEKMLVKTEYLARLVEKSSAQVL 300
           SKDQKQMNVCAEGF+VGNLTRLLGSEAANYTAGLEDLYEKML KTE LARLVE+SSAQVL
Sbjct: 241 SKDQKQMNVCAEGFDVGNLTRLLGSEAANYTAGLEDLYEKMLAKTECLARLVEESSAQVL 300

Query: 301 EQENHNRKLRYKVARYPGFE 321
           EQENHNRKLRYKVARYPGFE
Sbjct: 301 EQENHNRKLRYKVARYPGFE 320

[Close]
BLAST of Lsi01G015830 vs. ExPASy TrEMBL
Match: A0A6J1GD52 (uncharacterized protein LOC111453096 OS=Cucurbita moschata OX=3662 GN=LOC111453096 PE=4 SV=1)

HSP 1 Score: 549.3 bits (1414), Expect = 1.1e-152
Identity = 280/321 (87.23%), Postives = 303/321 (94.39%), Query Frame = 0 

Query: 1   MEDDSLQKVAISGPILASLIQRV-SSSSGAVDGLLFGHVSDVTPLSLSDDSSSSTDIQPS 60
           MED+SLQKVAISGPILASLIQR  SSSSGAVDGLLFGHVS+ TPLSLSDD SSS++I+PS
Sbjct: 1   MEDESLQKVAISGPILASLIQRCSSSSSGAVDGLLFGHVSETTPLSLSDDPSSSSNIEPS 60

Query: 61  VRVATVTGFLCSGTTNSFYDSLGRVESKSLNRLLDRHQTDGQAQPHDSLLGWFAGRRRTQ 120
           VRVATVTGFLCSGTTNSFYDS G+V+S+ LNRLL R+ +DGQAQP+DSL+GWFAGRRRTQ
Sbjct: 61  VRVATVTGFLCSGTTNSFYDSSGQVDSQLLNRLLGRNLSDGQAQPNDSLVGWFAGRRRTQ 120

Query: 121 LRPSMREYLVSSSLSSMKQLSFPVKDAVNPTNLIPSVFMLLTTPLSDQIIHTHEYRAFQF 180
           LRPSMREYLVS+SLSSMKQLSFPVKD+V PTNLIPS+F+LLT+P+SDQIIHTHEYRAFQF
Sbjct: 121 LRPSMREYLVSASLSSMKQLSFPVKDSVKPTNLIPSLFLLLTSPISDQIIHTHEYRAFQF 180

Query: 181 RSSNEFFEPKSIDIVNIGPAFRGHYGSFTPNSPFPHLLCETRASPMNEDKNDENLTLMKQ 240
           RSSNEFFEPKSIDIVNIGPAFRGHYGSFTPNSPFPHL CE RASPMN DK D NL LMKQ
Sbjct: 181 RSSNEFFEPKSIDIVNIGPAFRGHYGSFTPNSPFPHLPCEMRASPMNVDKIDGNLNLMKQ 240

Query: 241 NSKDQKQMNVCAEGFEVGNLTRLLGSEAANYTAGLEDLYEKMLVKTEYLARLVEKSSAQV 300
           N KDQKQ+N+CAEGFE+GNLTRLLGSEAANYTAGLEDLYEKML KTE LARLVEKSSAQV
Sbjct: 241 NLKDQKQLNMCAEGFEIGNLTRLLGSEAANYTAGLEDLYEKMLAKTESLARLVEKSSAQV 300

Query: 301 LEQENHNRKLRYKVARYPGFE 321
           L+QENHNRKLRYK+ARYPGFE
Sbjct: 301 LDQENHNRKLRYKLARYPGFE 321

[Close]
BLAST of Lsi01G015830 vs. NCBI nr
Match: TYK10947.1 (Dehydration-responsive element-binding protein 2A [Cucumis melo var. makuwa])

HSP 1 Score: 587.8 bits (1514), Expect = 5.6e-164
Identity = 298/320 (93.12%), Postives = 309/320 (96.56%), Query Frame = 0 

Query: 1   MEDDSLQKVAISGPILASLIQRVSSSSGAVDGLLFGHVSDVTPLSLSDDSSSSTDIQPSV 60
           MEDDSLQKVAISGPILASLIQR SSSSGAVDGLLFGHVSDVT LSLSDDSSSSTD QPS+
Sbjct: 1   MEDDSLQKVAISGPILASLIQRFSSSSGAVDGLLFGHVSDVTLLSLSDDSSSSTDTQPSL 60

Query: 61  RVATVTGFLCSGTTNSFYDSLGRVESKSLNRLLDRHQTDGQAQPHDSLLGWFAGRRRTQL 120
           RVATVTGFLCSGTTNSFYDSLGRV+S+SLNRLLDRHQ+DGQAQPHDS LGWF+GRRRTQL
Sbjct: 61  RVATVTGFLCSGTTNSFYDSLGRVDSQSLNRLLDRHQSDGQAQPHDSFLGWFSGRRRTQL 120

Query: 121 RPSMREYLVSSSLSSMKQLSFPVKDAVNPTNLIPSVFMLLTTPLSDQIIHTHEYRAFQFR 180
           RPSMREYLVSSSLSSMKQLSFPVKDAVNPTN IPSVF+LLT+PLSDQIIHTHEYRAFQFR
Sbjct: 121 RPSMREYLVSSSLSSMKQLSFPVKDAVNPTNFIPSVFLLLTSPLSDQIIHTHEYRAFQFR 180

Query: 181 SSNEFFEPKSIDIVNIGPAFRGHYGSFTPNSPFPHLLCETRASPMNEDKNDENLTLMKQN 240
           SSNEFFEPKSIDIVNIGPAFRGHYGSF PNSPFPHL CE RASPMNEDKND+NL +MKQN
Sbjct: 181 SSNEFFEPKSIDIVNIGPAFRGHYGSFIPNSPFPHLPCEMRASPMNEDKNDDNLNMMKQN 240

Query: 241 SKDQKQMNVCAEGFEVGNLTRLLGSEAANYTAGLEDLYEKMLVKTEYLARLVEKSSAQVL 300
           SKDQKQMNVCAEGF+VGNLTRLLGSEAANYTAGLEDLYEKML KTE LARLVE+SSAQVL
Sbjct: 241 SKDQKQMNVCAEGFDVGNLTRLLGSEAANYTAGLEDLYEKMLAKTECLARLVEESSAQVL 300

Query: 301 EQENHNRKLRYKVARYPGFE 321
           EQENHNRKLRYKVARYPGFE
Sbjct: 301 EQENHNRKLRYKVARYPGFE 320

[Close]
BLAST of Lsi01G015830 vs. NCBI nr
Match: XP_004148597.1 (uncharacterized protein LOC101208097 [Cucumis sativus] >KGN54413.1 hypothetical protein Csa_021559 [Cucumis sativus])

HSP 1 Score: 587.4 bits (1513), Expect = 7.4e-164
Identity = 300/322 (93.17%), Postives = 312/322 (96.89%), Query Frame = 0 

Query: 1   MEDDSLQKVAISGPILASLIQRVSSSSGAVDGLLFGHVSDVTPLSLSDDSSSSTDIQPSV 60
           MEDDSLQKVAISGPILASLIQR SSSSGAVDGLLFGHVSDVTPLSLSDDSSSSTD QPS+
Sbjct: 1   MEDDSLQKVAISGPILASLIQRFSSSSGAVDGLLFGHVSDVTPLSLSDDSSSSTDTQPSL 60

Query: 61  RVATVTGFLCSGTTNSFYDSLGRVESKSLNRLLDRHQTDG--QAQPHDSLLGWFAGRRRT 120
           RVATVTGFLCSG+TNSFYDSLGRV+S+SLNRLLDRHQ+DG  QAQPHDSLLGWF+GRRRT
Sbjct: 61  RVATVTGFLCSGSTNSFYDSLGRVDSQSLNRLLDRHQSDGQAQAQPHDSLLGWFSGRRRT 120

Query: 121 QLRPSMREYLVSSSLSSMKQLSFPVKDAVNPTNLIPSVFMLLTTPLSDQIIHTHEYRAFQ 180
           QLRPSMREYLVSSSLSSMKQLSFPVKDAVNPTNLIPSVF+LLT+PLSDQIIHTHEYRAFQ
Sbjct: 121 QLRPSMREYLVSSSLSSMKQLSFPVKDAVNPTNLIPSVFLLLTSPLSDQIIHTHEYRAFQ 180

Query: 181 FRSSNEFFEPKSIDIVNIGPAFRGHYGSFTPNSPFPHLLCETRASPMNEDKNDENLTLMK 240
           FRSSNEFFEPKSIDIVNIGPAFRGHYGSF PNSPFPHLLCE RASPMNEDKND+NL +MK
Sbjct: 181 FRSSNEFFEPKSIDIVNIGPAFRGHYGSFIPNSPFPHLLCEMRASPMNEDKNDDNLNMMK 240

Query: 241 QNSKDQKQMNVCAEGFEVGNLTRLLGSEAANYTAGLEDLYEKMLVKTEYLARLVEKSSAQ 300
           QNSK QKQMNVCAEGF+VGNLTRLLGSEAANYTAGLEDLYEKML KTE LARLVE+SSAQ
Sbjct: 241 QNSKYQKQMNVCAEGFDVGNLTRLLGSEAANYTAGLEDLYEKMLAKTESLARLVEESSAQ 300

Query: 301 VLEQENHNRKLRYKVARYPGFE 321
           VLEQENHNRKLRYKVARYPGFE
Sbjct: 301 VLEQENHNRKLRYKVARYPGFE 322

[Close]
BLAST of Lsi01G015830 vs. NCBI nr
Match: XP_008464233.1 (PREDICTED: uncharacterized protein LOC103502164 [Cucumis melo] >XP_016903165.1 PREDICTED: uncharacterized protein LOC103502164 [Cucumis melo] >KAA0037714.1 Dehydration-responsive element-binding protein 2A [Cucumis melo var. makuwa])

HSP 1 Score: 585.9 bits (1509), Expect = 2.1e-163
Identity = 297/320 (92.81%), Postives = 308/320 (96.25%), Query Frame = 0 

Query: 1   MEDDSLQKVAISGPILASLIQRVSSSSGAVDGLLFGHVSDVTPLSLSDDSSSSTDIQPSV 60
           MEDDSL KVAISGPILASLIQR SSSSGAVDGLLFGHVSDVT LSLSDDSSSSTD QPS+
Sbjct: 1   MEDDSLHKVAISGPILASLIQRFSSSSGAVDGLLFGHVSDVTLLSLSDDSSSSTDTQPSL 60

Query: 61  RVATVTGFLCSGTTNSFYDSLGRVESKSLNRLLDRHQTDGQAQPHDSLLGWFAGRRRTQL 120
           RVATVTGFLCSGTTNSFYDSLGRV+S+SLNRLLDRHQ+DGQAQPHDS LGWF+GRRRTQL
Sbjct: 61  RVATVTGFLCSGTTNSFYDSLGRVDSQSLNRLLDRHQSDGQAQPHDSFLGWFSGRRRTQL 120

Query: 121 RPSMREYLVSSSLSSMKQLSFPVKDAVNPTNLIPSVFMLLTTPLSDQIIHTHEYRAFQFR 180
           RPSMREYLVSSSLSSMKQLSFPVKDAVNPTN IPSVF+LLT+PLSDQIIHTHEYRAFQFR
Sbjct: 121 RPSMREYLVSSSLSSMKQLSFPVKDAVNPTNFIPSVFLLLTSPLSDQIIHTHEYRAFQFR 180

Query: 181 SSNEFFEPKSIDIVNIGPAFRGHYGSFTPNSPFPHLLCETRASPMNEDKNDENLTLMKQN 240
           SSNEFFEPKSIDIVNIGPAFRGHYGSF PNSPFPHL CE RASPMNEDKND+NL +MKQN
Sbjct: 181 SSNEFFEPKSIDIVNIGPAFRGHYGSFIPNSPFPHLPCEMRASPMNEDKNDDNLNMMKQN 240

Query: 241 SKDQKQMNVCAEGFEVGNLTRLLGSEAANYTAGLEDLYEKMLVKTEYLARLVEKSSAQVL 300
           SKDQKQMNVCAEGF+VGNLTRLLGSEAANYTAGLEDLYEKML KTE LARLVE+SSAQVL
Sbjct: 241 SKDQKQMNVCAEGFDVGNLTRLLGSEAANYTAGLEDLYEKMLAKTECLARLVEESSAQVL 300

Query: 301 EQENHNRKLRYKVARYPGFE 321
           EQENHNRKLRYKVARYPGFE
Sbjct: 301 EQENHNRKLRYKVARYPGFE 320

[Close]
BLAST of Lsi01G015830 vs. NCBI nr
Match: XP_038883443.1 (uncharacterized protein LOC120074401 [Benincasa hispida] >XP_038883444.1 uncharacterized protein LOC120074401 [Benincasa hispida])

HSP 1 Score: 576.2 bits (1484), Expect = 1.7e-160
Identity = 296/320 (92.50%), Postives = 304/320 (95.00%), Query Frame = 0 

Query: 1   MEDDSLQKVAISGPILASLIQRVSSSSGAVDGLLFGHVSDVTPLSLSDDSSSSTDIQPSV 60
           MEDDSLQKVAISGPILASLIQR SSSSGAVDGLLFGHVSDVTPLSLSDDSSSST+ +PS+
Sbjct: 1   MEDDSLQKVAISGPILASLIQRFSSSSGAVDGLLFGHVSDVTPLSLSDDSSSSTNTEPSL 60

Query: 61  RVATVTGFLCSGTTNSFYDSLGRVESKSLNRLLDRHQTDGQAQPHDSLLGWFAGRRRTQL 120
           RVATVTGFLCSGTTNSFYDSLGRV S+SLNRLLDRHQTDGQAQPHDSLLGWFAGRRRTQL
Sbjct: 61  RVATVTGFLCSGTTNSFYDSLGRVNSQSLNRLLDRHQTDGQAQPHDSLLGWFAGRRRTQL 120

Query: 121 RPSMREYLVSSSLSSMKQLSFPVKDAVNPTNLIPSVFMLLTTPLSDQIIHTHEYRAFQFR 180
           RPSMREYLVSSSL SMK  SFPVKDA  PTN+IPSVF+LLT+PLSDQIIHTHEYRAFQFR
Sbjct: 121 RPSMREYLVSSSLPSMKPFSFPVKDA--PTNIIPSVFLLLTSPLSDQIIHTHEYRAFQFR 180

Query: 181 SSNEFFEPKSIDIVNIGPAFRGHYGSFTPNSPFPHLLCETRASPMNEDKNDENLTLMKQN 240
           SSNEFFEPKSIDIVNIGPAFRGHYGSFTPNSP PHLLCE RASPMNEDKNDENL LMKQN
Sbjct: 181 SSNEFFEPKSIDIVNIGPAFRGHYGSFTPNSPLPHLLCEMRASPMNEDKNDENLNLMKQN 240

Query: 241 SKDQKQMNVCAEGFEVGNLTRLLGSEAANYTAGLEDLYEKMLVKTEYLARLVEKSSAQVL 300
           SKDQKQMN+CAEGFEVGNLTRLLGSEAANYTAGLEDLYEKML KTE LARLVEKSSAQVL
Sbjct: 241 SKDQKQMNMCAEGFEVGNLTRLLGSEAANYTAGLEDLYEKMLAKTECLARLVEKSSAQVL 300

Query: 301 EQENHNRKLRYKVARYPGFE 321
           EQENHNRKLRYKV R PG E
Sbjct: 301 EQENHNRKLRYKVVRSPGSE 318

[Close]
BLAST of Lsi01G015830 vs. NCBI nr
Match: XP_023544867.1 (uncharacterized protein LOC111804338 [Cucurbita pepo subsp. pepo] >XP_023544868.1 uncharacterized protein LOC111804338 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 550.8 bits (1418), Expect = 7.6e-153
Identity = 281/322 (87.27%), Postives = 304/322 (94.41%), Query Frame = 0 

Query: 1   MEDDSLQKVAISGPILASLIQRV--SSSSGAVDGLLFGHVSDVTPLSLSDDSSSSTDIQP 60
           MED+SLQKVAISGPILASLIQR   SSSSGAVDGLLFGHVS+ TPLSLSDDSSSS++I+P
Sbjct: 1   MEDESLQKVAISGPILASLIQRCSSSSSSGAVDGLLFGHVSETTPLSLSDDSSSSSNIEP 60

Query: 61  SVRVATVTGFLCSGTTNSFYDSLGRVESKSLNRLLDRHQTDGQAQPHDSLLGWFAGRRRT 120
           SVRVATVTGFLCSGTTNSFYDS G+V+S+ LNRLL R+ +DGQAQP+DSL+GWFAGRRRT
Sbjct: 61  SVRVATVTGFLCSGTTNSFYDSSGQVDSQLLNRLLGRNLSDGQAQPNDSLVGWFAGRRRT 120

Query: 121 QLRPSMREYLVSSSLSSMKQLSFPVKDAVNPTNLIPSVFMLLTTPLSDQIIHTHEYRAFQ 180
           QLRPSMREYLVS+SLSSMKQLSFPVKD+V PTNLIPS+F+LLT+P+SDQIIHTHEYRAFQ
Sbjct: 121 QLRPSMREYLVSASLSSMKQLSFPVKDSVKPTNLIPSLFLLLTSPISDQIIHTHEYRAFQ 180

Query: 181 FRSSNEFFEPKSIDIVNIGPAFRGHYGSFTPNSPFPHLLCETRASPMNEDKNDENLTLMK 240
           FRSSNEFFEPKSIDIVNIGPAFRGHYGSFTPNSPFPHL CE RASPMN DK D NL LMK
Sbjct: 181 FRSSNEFFEPKSIDIVNIGPAFRGHYGSFTPNSPFPHLPCEMRASPMNVDKIDGNLNLMK 240

Query: 241 QNSKDQKQMNVCAEGFEVGNLTRLLGSEAANYTAGLEDLYEKMLVKTEYLARLVEKSSAQ 300
           QN KDQKQ+N+CAEGFE+GNLTRLLGSEAANYTAGLEDLYEKML KTE LARLVEKSSAQ
Sbjct: 241 QNLKDQKQLNMCAEGFEIGNLTRLLGSEAANYTAGLEDLYEKMLAKTESLARLVEKSSAQ 300

Query: 301 VLEQENHNRKLRYKVARYPGFE 321
           VL+QENHNRKLRYK+ARYPGFE
Sbjct: 301 VLDQENHNRKLRYKLARYPGFE 322

[Close]
BLAST of Lsi01G015830 vs. TAIR 10
Match: AT3G08780.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, cultured cell; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; Has 129 Blast hits to 129 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 96; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 328.2 bits (840), Expect = 7.5e-90
Identity = 179/320 (55.94%), Postives = 229/320 (71.56%), Query Frame = 0 

Query: 1   MEDDSLQKVAISGPILASLIQRVSSSSGAVDGLLFGHVSDVTPLSLSDDSS---SSTDIQ 60
           M+D SL+K+ ISGP LASLIQR SSS   VDGL+FG +  +   +LSDDS    +S+   
Sbjct: 1   MDDLSLEKIEISGPTLASLIQRASSSPSDVDGLIFGQIHRIVSSNLSDDSPADIASSSSS 60

Query: 61  PSVRVATVTGFLCSGTTNSFYDSLGRVESKSLNRLLDRHQTDGQAQPHDSLLGWFAGRRR 120
               VATVT F+CSG T SFYD LGRV+S+ ++ L        +    D L+GWF+ RR+
Sbjct: 61  SDQIVATVTSFICSGKTVSFYDPLGRVDSRRIDSL--------RVDSPDHLIGWFSARRK 120

Query: 121 TQLRPSMREYLVSSSLSSMKQLSFPVKDAVNP--TNLIPSVFMLLTTPLSDQIIHTHEYR 180
           T  RPSMRE  V+SSLSS  Q   P++D  NP   N+  SVF LLT PL+DQ IHTHEYR
Sbjct: 121 TANRPSMRELAVTSSLSS--QFHLPIEDLQNPRSMNMASSVFFLLTMPLTDQCIHTHEYR 180

Query: 181 AFQFRSSNEFFEPKSIDIVNIGPAFRGHYGSFTPNSPFPHLLCETRASPMNEDKNDENLT 240
           A+QFRSS +  EP+S+ IVNIGPAFRGHYGSF+P S FP L+CE  +S M+ D ++ +L+
Sbjct: 181 AYQFRSSKQRLEPRSVGIVNIGPAFRGHYGSFSPKSGFPPLICELSSSAMSVDCDESSLS 240

Query: 241 LMKQNSKDQKQMNVCAEGFEVGNLTRLLGSEAANYTAGLEDLYEKMLVKTEYLARLVEKS 300
             KQ++KDQK+++  AEGF+VG L RL+G+EAANYT G+E++YE+ML K E LA  VEKS
Sbjct: 241 AKKQSAKDQKEIDALAEGFQVGELKRLVGAEAANYTGGIEEMYERMLAKIESLASDVEKS 300

Query: 301 SAQVLEQENHNRKLRYKVAR 316
           SA+V +QE HNRKLR +VAR
Sbjct: 301 SARVFQQEKHNRKLRNRVAR 310

[Close]
BLAST of Lsi01G015830 vs. TAIR 10
Match: AT3G08780.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, cultured cell; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 310.8 bits (795), Expect = 1.2e-84
Identity = 171/311 (54.98%), Postives = 221/311 (71.06%), Query Frame = 0 

Query: 1   MEDDSLQKVAISGPILASLIQRVSSSSGAVDGLLFGHVSDVTPLSLSDDSS---SSTDIQ 60
           M+D SL+K+ ISGP LASLIQR SSS   VDGL+FG +  +   +LSDDS    +S+   
Sbjct: 1   MDDLSLEKIEISGPTLASLIQRASSSPSDVDGLIFGQIHRIVSSNLSDDSPADIASSSSS 60

Query: 61  PSVRVATVTGFLCSGTTNSFYDSLGRVESKSLNRLLDRHQTDGQAQPHDSLLGWFAGRRR 120
               VATVT F+CSG T SFYD LGRV+S+ ++ L        +    D L+GWF+ RR+
Sbjct: 61  SDQIVATVTSFICSGKTVSFYDPLGRVDSRRIDSL--------RVDSPDHLIGWFSARRK 120

Query: 121 TQLRPSMREYLVSSSLSSMKQLSFPVKDAVNP--TNLIPSVFMLLTTPLSDQIIHTHEYR 180
           T  RPSMRE  V+SSLSS  Q   P++D  NP   N+  SVF LLT PL+DQ IHTHEYR
Sbjct: 121 TANRPSMRELAVTSSLSS--QFHLPIEDLQNPRSMNMASSVFFLLTMPLTDQCIHTHEYR 180

Query: 181 AFQFRSSNEFFEPKSIDIVNIGPAFRGHYGSFTPNSPFPHLLCETRASPMNEDKNDENLT 240
           A+QFRSS +  EP+S+ IVNIGPAFRGHYGSF+P S FP L+CE  +S M+ D ++ +L+
Sbjct: 181 AYQFRSSKQRLEPRSVGIVNIGPAFRGHYGSFSPKSGFPPLICELSSSAMSVDCDESSLS 240

Query: 241 LMKQNSKDQKQMNVCAEGFEVGNLTRLLGSEAANYTAGLEDLYEKMLVKTEYLARLVEKS 300
             KQ++KDQK+++  AEGF+VG L RL+G+EAANYT G+E++YE+ML K E LA  VEKS
Sbjct: 241 AKKQSAKDQKEIDALAEGFQVGELKRLVGAEAANYTGGIEEMYERMLAKIESLASDVEKS 300

Query: 301 SAQVLEQ-ENH 306
           SA+V +Q +NH
Sbjct: 301 SARVFQQVQNH 301

The following BLAST results are available for this feature:
BLAST of Lsi01G015830 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi01G015830 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CG442.7e-16493.13Dehydration-responsive element-binding protein 2A OS=Cucumis melo var. makuwa OX... [more]
A0A0A0KY283.6e-16493.17Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G314410 PE=4 SV=1[more]
A0A1S3CLG71.0e-16392.81uncharacterized protein LOC103502164 OS=Cucumis melo OX=3656 GN=LOC103502164 PE=... [more]
A0A5A7T2L91.0e-16392.81Dehydration-responsive element-binding protein 2A OS=Cucumis melo var. makuwa OX... [more]
A0A6J1GD521.1e-15287.23uncharacterized protein LOC111453096 OS=Cucurbita moschata OX=3662 GN=LOC1114530... [more]
BLAST of Lsi01G015830 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK10947.15.6e-16493.13Dehydration-responsive element-binding protein 2A [Cucumis melo var. makuwa][more]
XP_004148597.17.4e-16493.17uncharacterized protein LOC101208097 [Cucumis sativus] >KGN54413.1 hypothetical ... [more]
XP_008464233.12.1e-16392.81PREDICTED: uncharacterized protein LOC103502164 [Cucumis melo] >XP_016903165.1 P... [more]
XP_038883443.11.7e-16092.50uncharacterized protein LOC120074401 [Benincasa hispida] >XP_038883444.1 unchara... [more]
XP_023544867.17.6e-15387.27uncharacterized protein LOC111804338 [Cucurbita pepo subsp. pepo] >XP_023544868.... [more]
BLAST of Lsi01G015830 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G08780.17.5e-9055.94unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G08780.21.2e-8454.98unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023241FAM175 family, plantPRINTSPR02054FAM175PLANTcoord: 275..301
score: 59.26
coord: 1..21
score: 68.18
coord: 226..246
score: 38.1
coord: 198..218
score: 76.19
coord: 46..70
score: 36.0
coord: 252..272
score: 71.43
coord: 161..181
score: 80.95
IPR023238FAM175 familyPRINTSPR02051PROTEINF175coord: 110..126
score: 49.86
coord: 31..48
score: 38.36
coord: 11..29
score: 36.34
coord: 76..95
score: 43.81
coord: 190..204
score: 40.63
IPR023238FAM175 familyPANTHERPTHR31728ABRAXAS FAMILY MEMBERcoord: 1..314
NoneNo IPR availablePANTHERPTHR31728:SF5OS07G0540200 PROTEINcoord: 1..314

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G015830.1Lsi01G015830.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005634 nucleus
molecular_function GO:0031593 polyubiquitin modification-dependent protein binding