Lsi01G015720 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi01G015720
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCyclin-dependent kinase 11B-like
Locationchr01: 13934608 .. 13935954 (+)
RNA-Seq ExpressionLsi01G015720
SyntenyLsi01G015720
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGCCAAAAAAATCCCTCATCCGACAACTTTAGAAAAATACGTGTAACCTGAAAAGAGCTTCCAATTTTCTAATCGTCACTAGAATCAGACGCTCGTCCATTCCTCTGCTTATACATACAAGAGAAGAAAGTCCTATAATTTCAAATTGAAACCCTTACTGAAACAACAAATCTGAAAACAATGGAAGACGGAATTGCAGAGGAATATCCTCAGAATCTCATTCAACAACGAGAAGAAGAAGAAGAACACGAAAAATCGAGTGGGTTTTTGAGGAATTTCATTTCTAACATGGTGTCAGCAGAGGGAAGTGAAGAAAAGAAAGCAGAGCAAGAAGATGGAGAAAAGTCAAGTGGGTTTCTGAAGAATTTGATTTCGAACATGGTCTCGGCAGAGGAGAGTGAAGAAAAAACAGAAGAAGAAGAAGAAGAAAAAGGAAAGACAAATGGGTTTCTGAAGAATTTCATCTCGAATATGGTCTCTGGAGAGGAAAGTGAAGAAAAAAAAGAGGAAGAAGAAGAAGAAGAAGGAAAGGAAAATGGGTTTCTGAAGAATTTCATGTCGAACAGAGTACATGCAGAGGAGAGTAGAGAAAAAACAGAGGAAGTAGAAGGAAAAGAAAAAGAAGAAAAGGAAGGTGGGTTTCTGAGGAATTTCATTTCGAACATGGTGTCCGCAGAGGGAAATGAAGATGAAGAAAAAGAGAAGGAAGATGGTGGGATTGTAAACAATGTAATGGTTTCTCAGAAAACAGGGGAAGGGGAAATAGACAAAAGCGGCGGTTCTGAGTCGGTTGAAGAAAAGGGCGGCGGCGGTGGTGGAGGAGGAGGAATTATAGAAAACATTGTCTCCCACTTGCCTGCTTCACTTCAAGGTATGTAATTTCATAAAATAGAAAATTTTAATTGATTGAATTTGAGAGATGAACAGAGTAATGAGAAATCTGAAGTTGTTGTATGTTTTGTGGTGAATGAAACAGGTGATGCAGTGACAACAACAGATGAAGCTGCAATTCTGATTCACTCCATTATCCATGAATGAAAATTTCTTGGTTTTTTATTTTCTTTTGTTTTGTGTTCATAAGTTTTGTTTTCCCATGTAAATTTAAGTTGTTGTGTTTGATTGTTTGGGATCTGTACTCTTCTTTTTTGTTAAACAGAGTACATAAAAAATAAAGGGAGGGATAAGAGAAGGAAGATCCTGATTATCAGGATATTTGACTTTCAAGTTGCAGTTATGTTCAACTTTGAATCCTTATTATTGACAATGGATTCGATGTTTTGTTAGATGTAACAATTTAACAATGGGAAATTTTTCTCATGCAATGAAGGTTTTATTCCATTACTTTTT

mRNA sequence

CGCCAAAAAAATCCCTCATCCGACAACTTTAGAAAAATACGTGTAACCTGAAAAGAGCTTCCAATTTTCTAATCGTCACTAGAATCAGACGCTCGTCCATTCCTCTGCTTATACATACAAGAGAAGAAAGTCCTATAATTTCAAATTGAAACCCTTACTGAAACAACAAATCTGAAAACAATGGAAGACGGAATTGCAGAGGAATATCCTCAGAATCTCATTCAACAACGAGAAGAAGAAGAAGAACACGAAAAATCGAGTGGGTTTTTGAGGAATTTCATTTCTAACATGGTGTCAGCAGAGGGAAGTGAAGAAAAGAAAGCAGAGCAAGAAGATGGAGAAAAGTCAAGTGGGTTTCTGAAGAATTTGATTTCGAACATGGTCTCGGCAGAGGAGAGTGAAGAAAAAACAGAAGAAGAAGAAGAAGAAAAAGGAAAGACAAATGGGTTTCTGAAGAATTTCATCTCGAATATGGTCTCTGGAGAGGAAAGTGAAGAAAAAAAAGAGGAAGAAGAAGAAGAAGAAGGAAAGGAAAATGGGTTTCTGAAGAATTTCATGTCGAACAGAGTACATGCAGAGGAGAGTAGAGAAAAAACAGAGGAAGTAGAAGGAAAAGAAAAAGAAGAAAAGGAAGGTGGGTTTCTGAGGAATTTCATTTCGAACATGGTGTCCGCAGAGGGAAATGAAGATGAAGAAAAAGAGAAGGAAGATGGTGGGATTGTAAACAATGTAATGGTTTCTCAGAAAACAGGGGAAGGGGAAATAGACAAAAGCGGCGGTTCTGAGTCGGTTGAAGAAAAGGGCGGCGGCGGTGGTGGAGGAGGAGGAATTATAGAAAACATTGTCTCCCACTTGCCTGCTTCACTTCAAGGTGATGCAGTGACAACAACAGATGAAGCTGCAATTCTGATTCACTCCATTATCCATGAATGAAAATTTCTTGGTTTTTTATTTTCTTTTGTTTTGTGTTCATAAGTTTTGTTTTCCCATGTAAATTTAAGTTGTTGTGTTTGATTGTTTGGGATCTGTACTCTTCTTTTTTGTTAAACAGAGTACATAAAAAATAAAGGGAGGGATAAGAGAAGGAAGATCCTGATTATCAGGATATTTGACTTTCAAGTTGCAGTTATGTTCAACTTTGAATCCTTATTATTGACAATGGATTCGATGTTTTGTTAGATGTAACAATTTAACAATGGGAAATTTTTCTCATGCAATGAAGGTTTTATTCCATTACTTTTT

Coding sequence (CDS)

ATGGAAGACGGAATTGCAGAGGAATATCCTCAGAATCTCATTCAACAACGAGAAGAAGAAGAAGAACACGAAAAATCGAGTGGGTTTTTGAGGAATTTCATTTCTAACATGGTGTCAGCAGAGGGAAGTGAAGAAAAGAAAGCAGAGCAAGAAGATGGAGAAAAGTCAAGTGGGTTTCTGAAGAATTTGATTTCGAACATGGTCTCGGCAGAGGAGAGTGAAGAAAAAACAGAAGAAGAAGAAGAAGAAAAAGGAAAGACAAATGGGTTTCTGAAGAATTTCATCTCGAATATGGTCTCTGGAGAGGAAAGTGAAGAAAAAAAAGAGGAAGAAGAAGAAGAAGAAGGAAAGGAAAATGGGTTTCTGAAGAATTTCATGTCGAACAGAGTACATGCAGAGGAGAGTAGAGAAAAAACAGAGGAAGTAGAAGGAAAAGAAAAAGAAGAAAAGGAAGGTGGGTTTCTGAGGAATTTCATTTCGAACATGGTGTCCGCAGAGGGAAATGAAGATGAAGAAAAAGAGAAGGAAGATGGTGGGATTGTAAACAATGTAATGGTTTCTCAGAAAACAGGGGAAGGGGAAATAGACAAAAGCGGCGGTTCTGAGTCGGTTGAAGAAAAGGGCGGCGGCGGTGGTGGAGGAGGAGGAATTATAGAAAACATTGTCTCCCACTTGCCTGCTTCACTTCAAGGTGATGCAGTGACAACAACAGATGAAGCTGCAATTCTGATTCACTCCATTATCCATGAATGA

Protein sequence

MEDGIAEEYPQNLIQQREEEEEHEKSSGFLRNFISNMVSAEGSEEKKAEQEDGEKSSGFLKNLISNMVSAEESEEKTEEEEEEKGKTNGFLKNFISNMVSGEESEEKKEEEEEEEGKENGFLKNFMSNRVHAEESREKTEEVEGKEKEEKEGGFLRNFISNMVSAEGNEDEEKEKEDGGIVNNVMVSQKTGEGEIDKSGGSESVEEKGGGGGGGGGIIENIVSHLPASLQGDAVTTTDEAAILIHSIIHE
Homology
BLAST of Lsi01G015720 vs. ExPASy Swiss-Prot
Match: Q8T6B4 (ABC transporter F family member 4 OS=Dictyostelium discoideum OX=44689 GN=abcF4 PE=3 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.3e-05
Identity = 57/188 (30.32%), Postives = 88/188 (46.81%), Query Frame = 0

Query: 14  IQQREEEEEHEKSSGFLRNFISNMVSAEGSEEKKAEQEDGEKSSGFLKNLISNMVSAEES 73
           +++ EEEEE E+        I   V   G ++KK+  ED                  EE 
Sbjct: 390 VEEEEEEEEEEEE-------IEQPVKKGGKKDKKSSLEDSMSELSIKSKKGGKGKHVEEE 449

Query: 74  EEKTEEEEEEKGKTNGFLKNFISNMVSGEESEEKKEEEEEEEGKENGFLKNFMSNRVHAE 133
           EE+ +EEEEEK K+    K+        EE EE++EEEE+ + K N   K   S  +  E
Sbjct: 450 EEQEQEEEEEKPKSKSNKKDKKKGKHVEEEEEEEEEEEEKPKSKSNKKDKKKGSKHIEEE 509

Query: 134 ESREKTEEVEGKEKEEKEGGFLRNF-----ISNMVSAEGNEDEEKEKEDGGIVNNVMVSQ 193
           E  E+ EE E KE+EE++   L        +  +   E  +++EK+K D    +   +++
Sbjct: 510 EEEEEEEEEEEKEEEEEKKMTLAEIRAAKKVKKVDKKEKKKEKEKKKRDEQEEDAFELAK 569

Query: 194 KTGEGEID 197
           K  + EID
Sbjct: 570 KKQQEEID 570

BLAST of Lsi01G015720 vs. ExPASy Swiss-Prot
Match: E9Q743 (Cilia- and flagella-associated protein 251 OS=Mus musculus OX=10090 GN=Cfap251 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 6.3e-04
Identity = 60/176 (34.09%), Postives = 80/176 (45.45%), Query Frame = 0

Query: 2   EDGIAEEYPQNLIQQREEEEEHEKSSGFLRNFISNMVSAEGSEEKKAEQEDGEKSSGFLK 61
           E G  EE  +   ++ EEEEE EK               E  EE+K ++E+ E+      
Sbjct: 14  ESGEMEEEKEEKKEEEEEEEEGEKE------------KEEEEEEEKGKEEEKEEE----- 73

Query: 62  NLISNMVSAEESEEKTEEEEEEKGKTNGFLKNFISNMVSGEESEEKKEEEEEEEGKENGF 121
                    E  EE+ +EEEEEKGK     +         EE EE+KEEEE+EE KE   
Sbjct: 74  -------KEEGKEEEKKEEEEEKGKKEEEEEEEEEGKGKEEEKEEEKEEEEKEEEKE--- 133

Query: 122 LKNFMSNRVHAEESREKTEEVEGKEKEEKEGGFLRNFISNMVSAEGNEDEEKEKED 178
                      EE + K EE EGKE+EE+E    +         E  E+EE+EKE+
Sbjct: 134 -----KEEEEEEEGKGKEEEEEGKEEEEEE----KEEEEKEEEKEEEEEEEEEKEE 153

BLAST of Lsi01G015720 vs. ExPASy TrEMBL
Match: A0A5D3CID7 (Cyclin-dependent kinase 11B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold107G00140 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 1.4e-86
Identity = 197/256 (76.95%), Postives = 216/256 (84.38%), Query Frame = 0

Query: 1   MEDGIAEEYPQNLIQQREEEEEHEKSSGFLRNFISNMVSAEGSEEKKAE---QEDGEKSS 60
           MEDGIA+E PQN +QQR +EEEHEKSSGF +NFISNM S E S+EKK +   +E+GEKSS
Sbjct: 1   MEDGIADERPQNFVQQRGQEEEHEKSSGFFKNFISNMASPEESDEKKTDRENEENGEKSS 60

Query: 61  GFLKNLISNMVSAEESEEKTEEEEEEKGKTNGFLKNFISNMVSGEESEEKKEEEEEEEGK 120
           GFLKN ISNMVSAEE+EEKTE+EEEE+GKTNGFLKNFISN+VSGEE+EEK   EEEEEGK
Sbjct: 61  GFLKNFISNMVSAEETEEKTEQEEEEEGKTNGFLKNFISNIVSGEETEEK--AEEEEEGK 120

Query: 121 ENGFLKNFMSNRVHAEESREKTEEVEGKEKEEKEGGFLRNFISNMVSAEGNEDEEKEKED 180
           ENGFLKNFMSNRV+  ES EKTE     E+EEK GGFLRNFISNMVS+EGNED     +D
Sbjct: 121 ENGFLKNFMSNRVNEGESEEKTE-----EEEEKGGGFLRNFISNMVSSEGNED-----DD 180

Query: 181 GGIVNNVMVSQKTGEGEIDKSGGSESVEEKGG---GGGGGGGIIENIVSHLPASLQGDAV 240
           G I +N MVSQKTGE E DKS G ESVEEKGG    GGGGGGII+NIVSHLPASLQGDAV
Sbjct: 181 GKIASNDMVSQKTGEEERDKSSGYESVEEKGGDNSSGGGGGGIIDNIVSHLPASLQGDAV 240

Query: 241 TTTDEAAILIHSIIHE 251
           TTTDEAAILIHSIIHE
Sbjct: 241 TTTDEAAILIHSIIHE 244

BLAST of Lsi01G015720 vs. ExPASy TrEMBL
Match: A0A0A0L1D7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G312840 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 2.5e-80
Identity = 187/259 (72.20%), Postives = 215/259 (83.01%), Query Frame = 0

Query: 2   EDGIAEEYPQNLIQQREEEEEHEKSSGFLRNFISNMVSAEGSEEKKAE---QEDGEKSSG 61
           EDG+A+E+  N IQQR +E+EH+KSSGFL+NFISNM S+EG++EKK +   QE+GEKSSG
Sbjct: 3   EDGVADEHSHNFIQQRGQEQEHQKSSGFLKNFISNMASSEGTDEKKTDHEYQENGEKSSG 62

Query: 62  FLKNLISNMVSAEESEEKT--EEEEEEKGKTNGFLKNFISNMVSGEESEEKKEEEEEEEG 121
           FLKN +SNMVSAEE+E KT  E+EEEE+GKTNGFLKNFISN+VSGEE+EE K EEEEEEG
Sbjct: 63  FLKNFMSNMVSAEENEGKTDQEKEEEEEGKTNGFLKNFISNIVSGEETEE-KAEEEEEEG 122

Query: 122 KENGFLKNFMSNRVHAEESREKTEEVEGKEKEEKEGGFLRNFISNMVSAEGNEDEEKEKE 181
           KENGFLK FMSN+V+  E  EKTE      +EEK GGFLRNFISNMVS+EGNED     +
Sbjct: 123 KENGFLKTFMSNKVNEGEREEKTE-----VEEEKGGGFLRNFISNMVSSEGNED-----D 182

Query: 182 DGGIVNNVMVSQKTGEGEIDKSGGSESVEEKG-----GGGGGGGGIIENIVSHLPASLQG 241
           DG + +N MVSQKTGE E DKS G +SVEEKG     GGGGGGGGII+NIVSHLPASLQG
Sbjct: 183 DGKMASNDMVSQKTGEEERDKSSGYKSVEEKGGDNGSGGGGGGGGIIDNIVSHLPASLQG 242

Query: 242 DAVTTTDEAAILIHSIIHE 251
           DAVTT+DEAAILIHSIIHE
Sbjct: 243 DAVTTSDEAAILIHSIIHE 250

BLAST of Lsi01G015720 vs. ExPASy TrEMBL
Match: A0A5A7T838 (Cyclin-dependent kinase 11B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold141G00200 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 5.4e-67
Identity = 168/256 (65.62%), Postives = 184/256 (71.88%), Query Frame = 0

Query: 1   MEDGIAEEYPQNLIQQREEEEEHEKSSGFLRNFISNMVSAEGSEEKKAE---QEDGEKSS 60
           MEDGIA+E PQN +QQR + EEHEKSSGF +NFISNM S E S+EKK +   +E+GEKSS
Sbjct: 1   MEDGIADERPQNFVQQRGQVEEHEKSSGFFKNFISNMASPEESDEKKTDRENEENGEKSS 60

Query: 61  GFLKNLISNMVSAEESEEKTEEEEEEKGKTNGFLKNFISNMVSGEESEEKKEEEEEEEGK 120
           GFLKN ISNMVSAEE+EEKT                                E+EEEEGK
Sbjct: 61  GFLKNFISNMVSAEETEEKT--------------------------------EQEEEEGK 120

Query: 121 ENGFLKNFMSNRVHAEESREKTEEVEGKEKEEKEGGFLRNFISNMVSAEGNEDEEKEKED 180
            NGFLKNFMSNRV+  E  EKTE     E+EEK GGFLRNFISNMVS+EGNED     +D
Sbjct: 121 TNGFLKNFMSNRVNEGECEEKTE-----EEEEKGGGFLRNFISNMVSSEGNED-----DD 180

Query: 181 GGIVNNVMVSQKTGEGEIDKSGGSESVEEKGG---GGGGGGGIIENIVSHLPASLQGDAV 240
           G I +N MVSQKTGE E DKS G ESVEEKGG    GGGGGGII+NIVSHLPASLQGDAV
Sbjct: 181 GKIASNDMVSQKTGEEERDKSSGYESVEEKGGDNSSGGGGGGIIDNIVSHLPASLQGDAV 214

Query: 241 TTTDEAAILIHSIIHE 251
           TTTDEAAILIHSIIHE
Sbjct: 241 TTTDEAAILIHSIIHE 214

BLAST of Lsi01G015720 vs. ExPASy TrEMBL
Match: A0A1S3CMH8 (cyclin-dependent kinase 11B-like OS=Cucumis melo OX=3656 GN=LOC103502155 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 5.4e-67
Identity = 168/256 (65.62%), Postives = 184/256 (71.88%), Query Frame = 0

Query: 1   MEDGIAEEYPQNLIQQREEEEEHEKSSGFLRNFISNMVSAEGSEEKKAE---QEDGEKSS 60
           MEDGIA+E PQN +QQR + EEHEKSSGF +NFISNM S E S+EKK +   +E+GEKSS
Sbjct: 1   MEDGIADERPQNFVQQRGQVEEHEKSSGFFKNFISNMASPEESDEKKTDRENEENGEKSS 60

Query: 61  GFLKNLISNMVSAEESEEKTEEEEEEKGKTNGFLKNFISNMVSGEESEEKKEEEEEEEGK 120
           GFLKN ISNMVSAEE+EEKT                                E+EEEEGK
Sbjct: 61  GFLKNFISNMVSAEETEEKT--------------------------------EQEEEEGK 120

Query: 121 ENGFLKNFMSNRVHAEESREKTEEVEGKEKEEKEGGFLRNFISNMVSAEGNEDEEKEKED 180
            NGFLKNFMSNRV+  E  EKTE     E+EEK GGFLRNFISNMVS+EGNED     +D
Sbjct: 121 TNGFLKNFMSNRVNEGECEEKTE-----EEEEKGGGFLRNFISNMVSSEGNED-----DD 180

Query: 181 GGIVNNVMVSQKTGEGEIDKSGGSESVEEKGG---GGGGGGGIIENIVSHLPASLQGDAV 240
           G I +N MVSQKTGE E DKS G ESVEEKGG    GGGGGGII+NIVSHLPASLQGDAV
Sbjct: 181 GKIASNDMVSQKTGEEERDKSSGYESVEEKGGDNSSGGGGGGIIDNIVSHLPASLQGDAV 214

Query: 241 TTTDEAAILIHSIIHE 251
           TTTDEAAILIHSIIHE
Sbjct: 241 TTTDEAAILIHSIIHE 214

BLAST of Lsi01G015720 vs. ExPASy TrEMBL
Match: A0A6J1GER9 (cilia- and flagella-associated protein 251 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453519 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 4.5e-45
Identity = 140/256 (54.69%), Postives = 149/256 (58.20%), Query Frame = 0

Query: 1   MEDGIAEEYPQNLIQQR----EEEEEHEKSSGFLRNFISNMVSAEGSEEKKAEQEDGEKS 60
           ME G AEE+PQ LIQQR    EEEEE EKSSGFLRNFISNMVSAEG EEKK  +ED EK 
Sbjct: 23  MEGGAAEEHPQKLIQQRGGEEEEEEEKEKSSGFLRNFISNMVSAEGGEEKK--EEDEEKE 82

Query: 61  SGFLKNLISNMVSAEESEEKTEEEEEEKGKTNGFLKNFISNMVSGEESEEKKEEEEEEEG 120
           SGFLKN IS+MVSAEESEEKT                                E+EEE+G
Sbjct: 83  SGFLKNFISSMVSAEESEEKT--------------------------------EKEEEQG 142

Query: 121 KENGFLKNFMSNRVHAEESREKTEEVEGKEKEEKEGGFLRNFISNMVSAEGNEDEEKEKE 180
           K++GFLK                                 NFI+NM SAEGNED      
Sbjct: 143 KKSGFLK---------------------------------NFIANMASAEGNED------ 192

Query: 181 DGGIVNNVMVSQKTGEGEIDKSGGSESVEEK--GGGGGGGGGIIENIVSHLPASLQGDAV 240
                         GE E DKSGGSESVEEK  GG GG GGGII+NIVSHLPASLQGDA 
Sbjct: 203 -------------GGEEERDKSGGSESVEEKSSGGNGGAGGGIIDNIVSHLPASLQGDAA 192

Query: 241 TTTDEAAILIHSIIHE 251
           TTTDEAAILIHSIIHE
Sbjct: 263 TTTDEAAILIHSIIHE 192

BLAST of Lsi01G015720 vs. NCBI nr
Match: XP_038883081.1 (ABC transporter F family member 4 [Benincasa hispida])

HSP 1 Score: 331.3 bits (848), Expect = 7.4e-87
Identity = 212/308 (68.83%), Postives = 226/308 (73.38%), Query Frame = 0

Query: 1   MEDGIAEEYPQNLIQQREEEEEHEKSSGFLRNFISNMVSAEGSEEKKAEQ---EDGEKSS 60
           MEDG+AEE+P N IQQR +EEE EK SGFLRNFISNMVSAEGSEEKKAEQ   EDGEKSS
Sbjct: 1   MEDGMAEEHPPNFIQQRGDEEEQEKLSGFLRNFISNMVSAEGSEEKKAEQGDGEDGEKSS 60

Query: 61  GFLKNLISNMVSAEESEEKTEE---------------------------EEEEKGKTNGF 120
           GFLKNLISNMVSAEESEEKTEE                           EEEE+GKTNGF
Sbjct: 61  GFLKNLISNMVSAEESEEKTEEEEEGKTNGFLKNFISNMVSGEDIEEKTEEEEEGKTNGF 120

Query: 121 LKNFISNMVSGEESEEK----------------------------KEEEEEEEGKENGFL 180
           LKNFISNMVSGEE+EEK                            K EEEEEEGKE+G L
Sbjct: 121 LKNFISNMVSGEETEEKTEEEEEGKTNGFLKNFISNMVSGEEREEKTEEEEEEGKEHGLL 180

Query: 181 KNFMSNRVHAEESREKTEEVEGKEKEEKEGGFLRNFISNMVSAEGNEDEEKEKEDGGIVN 240
           KNFMSNRVHAEES E+TE+ + +E+EEK GG LRNFISNMVSAEGNEDEEKE+ED     
Sbjct: 181 KNFMSNRVHAEESEEETEDKQ-EEEEEKGGGLLRNFISNMVSAEGNEDEEKEEED----- 240

Query: 241 NVMVSQKTGEGEIDKSGGSESVEEKGGGGGGGGGIIENIVSHLPASLQGDAVTTTDEAAI 251
            VM+S+KTGEGE DKSGGSE VEEK   GGGGGGII NIVSHLPASLQGDAVTTTDEAAI
Sbjct: 241 -VMISEKTGEGERDKSGGSELVEEK---GGGGGGIIYNIVSHLPASLQGDAVTTTDEAAI 298

BLAST of Lsi01G015720 vs. NCBI nr
Match: TYK10934.1 (cyclin-dependent kinase 11B-like [Cucumis melo var. makuwa])

HSP 1 Score: 329.3 bits (843), Expect = 2.8e-86
Identity = 197/256 (76.95%), Postives = 216/256 (84.38%), Query Frame = 0

Query: 1   MEDGIAEEYPQNLIQQREEEEEHEKSSGFLRNFISNMVSAEGSEEKKAE---QEDGEKSS 60
           MEDGIA+E PQN +QQR +EEEHEKSSGF +NFISNM S E S+EKK +   +E+GEKSS
Sbjct: 1   MEDGIADERPQNFVQQRGQEEEHEKSSGFFKNFISNMASPEESDEKKTDRENEENGEKSS 60

Query: 61  GFLKNLISNMVSAEESEEKTEEEEEEKGKTNGFLKNFISNMVSGEESEEKKEEEEEEEGK 120
           GFLKN ISNMVSAEE+EEKTE+EEEE+GKTNGFLKNFISN+VSGEE+EEK   EEEEEGK
Sbjct: 61  GFLKNFISNMVSAEETEEKTEQEEEEEGKTNGFLKNFISNIVSGEETEEK--AEEEEEGK 120

Query: 121 ENGFLKNFMSNRVHAEESREKTEEVEGKEKEEKEGGFLRNFISNMVSAEGNEDEEKEKED 180
           ENGFLKNFMSNRV+  ES EKTE     E+EEK GGFLRNFISNMVS+EGNED     +D
Sbjct: 121 ENGFLKNFMSNRVNEGESEEKTE-----EEEEKGGGFLRNFISNMVSSEGNED-----DD 180

Query: 181 GGIVNNVMVSQKTGEGEIDKSGGSESVEEKGG---GGGGGGGIIENIVSHLPASLQGDAV 240
           G I +N MVSQKTGE E DKS G ESVEEKGG    GGGGGGII+NIVSHLPASLQGDAV
Sbjct: 181 GKIASNDMVSQKTGEEERDKSSGYESVEEKGGDNSSGGGGGGIIDNIVSHLPASLQGDAV 240

Query: 241 TTTDEAAILIHSIIHE 251
           TTTDEAAILIHSIIHE
Sbjct: 241 TTTDEAAILIHSIIHE 244

BLAST of Lsi01G015720 vs. NCBI nr
Match: XP_004148627.1 (cilia- and flagella-associated protein 251 [Cucumis sativus] >KGN54402.1 hypothetical protein Csa_018150 [Cucumis sativus])

HSP 1 Score: 308.5 bits (789), Expect = 5.2e-80
Identity = 187/259 (72.20%), Postives = 215/259 (83.01%), Query Frame = 0

Query: 2   EDGIAEEYPQNLIQQREEEEEHEKSSGFLRNFISNMVSAEGSEEKKAE---QEDGEKSSG 61
           EDG+A+E+  N IQQR +E+EH+KSSGFL+NFISNM S+EG++EKK +   QE+GEKSSG
Sbjct: 3   EDGVADEHSHNFIQQRGQEQEHQKSSGFLKNFISNMASSEGTDEKKTDHEYQENGEKSSG 62

Query: 62  FLKNLISNMVSAEESEEKT--EEEEEEKGKTNGFLKNFISNMVSGEESEEKKEEEEEEEG 121
           FLKN +SNMVSAEE+E KT  E+EEEE+GKTNGFLKNFISN+VSGEE+EE K EEEEEEG
Sbjct: 63  FLKNFMSNMVSAEENEGKTDQEKEEEEEGKTNGFLKNFISNIVSGEETEE-KAEEEEEEG 122

Query: 122 KENGFLKNFMSNRVHAEESREKTEEVEGKEKEEKEGGFLRNFISNMVSAEGNEDEEKEKE 181
           KENGFLK FMSN+V+  E  EKTE      +EEK GGFLRNFISNMVS+EGNED     +
Sbjct: 123 KENGFLKTFMSNKVNEGEREEKTE-----VEEEKGGGFLRNFISNMVSSEGNED-----D 182

Query: 182 DGGIVNNVMVSQKTGEGEIDKSGGSESVEEKG-----GGGGGGGGIIENIVSHLPASLQG 241
           DG + +N MVSQKTGE E DKS G +SVEEKG     GGGGGGGGII+NIVSHLPASLQG
Sbjct: 183 DGKMASNDMVSQKTGEEERDKSSGYKSVEEKGGDNGSGGGGGGGGIIDNIVSHLPASLQG 242

Query: 242 DAVTTTDEAAILIHSIIHE 251
           DAVTT+DEAAILIHSIIHE
Sbjct: 243 DAVTTSDEAAILIHSIIHE 250

BLAST of Lsi01G015720 vs. NCBI nr
Match: XP_008464224.1 (PREDICTED: cyclin-dependent kinase 11B-like [Cucumis melo] >KAA0037727.1 cyclin-dependent kinase 11B-like [Cucumis melo var. makuwa])

HSP 1 Score: 264.2 bits (674), Expect = 1.1e-66
Identity = 168/256 (65.62%), Postives = 184/256 (71.88%), Query Frame = 0

Query: 1   MEDGIAEEYPQNLIQQREEEEEHEKSSGFLRNFISNMVSAEGSEEKKAE---QEDGEKSS 60
           MEDGIA+E PQN +QQR + EEHEKSSGF +NFISNM S E S+EKK +   +E+GEKSS
Sbjct: 1   MEDGIADERPQNFVQQRGQVEEHEKSSGFFKNFISNMASPEESDEKKTDRENEENGEKSS 60

Query: 61  GFLKNLISNMVSAEESEEKTEEEEEEKGKTNGFLKNFISNMVSGEESEEKKEEEEEEEGK 120
           GFLKN ISNMVSAEE+EEKT                                E+EEEEGK
Sbjct: 61  GFLKNFISNMVSAEETEEKT--------------------------------EQEEEEGK 120

Query: 121 ENGFLKNFMSNRVHAEESREKTEEVEGKEKEEKEGGFLRNFISNMVSAEGNEDEEKEKED 180
            NGFLKNFMSNRV+  E  EKTE     E+EEK GGFLRNFISNMVS+EGNED     +D
Sbjct: 121 TNGFLKNFMSNRVNEGECEEKTE-----EEEEKGGGFLRNFISNMVSSEGNED-----DD 180

Query: 181 GGIVNNVMVSQKTGEGEIDKSGGSESVEEKGG---GGGGGGGIIENIVSHLPASLQGDAV 240
           G I +N MVSQKTGE E DKS G ESVEEKGG    GGGGGGII+NIVSHLPASLQGDAV
Sbjct: 181 GKIASNDMVSQKTGEEERDKSSGYESVEEKGGDNSSGGGGGGIIDNIVSHLPASLQGDAV 214

Query: 241 TTTDEAAILIHSIIHE 251
           TTTDEAAILIHSIIHE
Sbjct: 241 TTTDEAAILIHSIIHE 214

BLAST of Lsi01G015720 vs. NCBI nr
Match: KAG7033757.1 (hypothetical protein SDJN02_03482, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 195.7 bits (496), Expect = 4.9e-46
Identity = 139/256 (54.30%), Postives = 148/256 (57.81%), Query Frame = 0

Query: 1   MEDGIAEEYPQNLIQQR---EEEEEHEKSSGFLRNFISNMVSAEGSEEKKAEQEDGEKSS 60
           ME G AEE+PQ LIQQR   EEEEE EKSSGFLRNFISNMVSAEG EE K  +ED EK S
Sbjct: 23  MEGGAAEEHPQKLIQQRGGEEEEEEKEKSSGFLRNFISNMVSAEGGEENK--EEDEEKES 82

Query: 61  GFLKNLISNMVSAEESEEKTEEEEEEKGKTNGFLKNFISNMVSGEESEEKKEEEEEEEGK 120
           GFLKN IS+MVSAEESEEKTE+EEE++GK +GFLK                         
Sbjct: 83  GFLKNFISSMVSAEESEEKTEKEEEQQGKKSGFLK------------------------- 142

Query: 121 ENGFLKNFMSNRVHAEESREKTEEVEGKEKEEKEGGFLRNFISNMVSAEGNEDEEKEKED 180
                                                  NFI+NM SAEGNED       
Sbjct: 143 ---------------------------------------NFIANMASAEGNED------- 193

Query: 181 GGIVNNVMVSQKTGEGEIDKSGGSESVEEK---GGGGGGGGGIIENIVSHLPASLQGDAV 240
                        GE E DKSGGSESVEEK   GG GG GGGII+NIVSHLPASLQGDA 
Sbjct: 203 ------------GGEEERDKSGGSESVEEKSSGGGNGGAGGGIIDNIVSHLPASLQGDAA 193

Query: 241 TTTDEAAILIHSIIHE 251
           TTTDEAAILIHSIIHE
Sbjct: 263 TTTDEAAILIHSIIHE 193

BLAST of Lsi01G015720 vs. TAIR 10
Match: AT3G51750.1 (unknown protein; Has 15 Blast hits to 14 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 2.9e-04
Identity = 45/147 (30.61%), Postives = 64/147 (43.54%), Query Frame = 0

Query: 102 EESEEKKEEEEEEEGKENGFLKNFMSNRVHAEESREKTEEVEGKEKEEKEGGFLRNFISN 161
           E++++K+EEEE+E+G + G L N +SN +        T  VEGK  E            N
Sbjct: 19  EKNKDKQEEEEDEKGAKGGILNNLISNFMDC-----TTTTVEGKSSE------------N 78

Query: 162 MVSAEGNEDEEKEKEDGGIVNNVMVSQKTGEGEIDKSGGSESVEEKGGGGGGGGGIIENI 221
           +  +   +++EKE+E   +                                   GI+E I
Sbjct: 79  IQKSLCEDEDEKEQESPSV-----------------------------------GILEKI 109

Query: 222 VSHLPASLQGDAVTTTDEAAILIHSII 249
           +SHLP     D   TTDEAAILIHS I
Sbjct: 139 ISHLPE----DVAPTTDEAAILIHSAI 109

BLAST of Lsi01G015720 vs. TAIR 10
Match: AT3G51750.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 2.9e-04
Identity = 45/147 (30.61%), Postives = 64/147 (43.54%), Query Frame = 0

Query: 102 EESEEKKEEEEEEEGKENGFLKNFMSNRVHAEESREKTEEVEGKEKEEKEGGFLRNFISN 161
           E++++K+EEEE+E+G + G L N +SN +        T  VEGK  E            N
Sbjct: 19  EKNKDKQEEEEDEKGAKGGILNNLISNFMDC-----TTTTVEGKSSE------------N 78

Query: 162 MVSAEGNEDEEKEKEDGGIVNNVMVSQKTGEGEIDKSGGSESVEEKGGGGGGGGGIIENI 221
           +  +   +++EKE+E   +                                   GI+E I
Sbjct: 79  IQKSLCEDEDEKEQESPSV-----------------------------------GILEKI 108

Query: 222 VSHLPASLQGDAVTTTDEAAILIHSII 249
           +SHLP     D   TTDEAAILIHS I
Sbjct: 139 ISHLP-----DVAPTTDEAAILIHSAI 108

BLAST of Lsi01G015720 vs. TAIR 10
Match: AT3G51750.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages. )

HSP 1 Score: 43.5 bits (101), Expect = 2.9e-04
Identity = 45/147 (30.61%), Postives = 64/147 (43.54%), Query Frame = 0

Query: 102 EESEEKKEEEEEEEGKENGFLKNFMSNRVHAEESREKTEEVEGKEKEEKEGGFLRNFISN 161
           E++++K+EEEE+E+G + G L N +SN +        T  VEGK  E            N
Sbjct: 19  EKNKDKQEEEEDEKGAKGGILNNLISNFMDC-----TTTTVEGKSSE------------N 78

Query: 162 MVSAEGNEDEEKEKEDGGIVNNVMVSQKTGEGEIDKSGGSESVEEKGGGGGGGGGIIENI 221
           +  +   +++EKE+E   +                                   GI+E I
Sbjct: 79  IQKSLCEDEDEKEQESPSV-----------------------------------GILEKI 109

Query: 222 VSHLPASLQGDAVTTTDEAAILIHSII 249
           +SHLP     D   TTDEAAILIHS I
Sbjct: 139 ISHLPE----DVAPTTDEAAILIHSAI 109

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8T6B43.3e-0530.32ABC transporter F family member 4 OS=Dictyostelium discoideum OX=44689 GN=abcF4 ... [more]
E9Q7436.3e-0434.09Cilia- and flagella-associated protein 251 OS=Mus musculus OX=10090 GN=Cfap251 P... [more]
Match NameE-valueIdentityDescription
A0A5D3CID71.4e-8676.95Cyclin-dependent kinase 11B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A0A0L1D72.5e-8072.20Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G312840 PE=4 SV=1[more]
A0A5A7T8385.4e-6765.63Cyclin-dependent kinase 11B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... [more]
A0A1S3CMH85.4e-6765.63cyclin-dependent kinase 11B-like OS=Cucumis melo OX=3656 GN=LOC103502155 PE=4 SV... [more]
A0A6J1GER94.5e-4554.69cilia- and flagella-associated protein 251 isoform X1 OS=Cucurbita moschata OX=3... [more]
Match NameE-valueIdentityDescription
XP_038883081.17.4e-8768.83ABC transporter F family member 4 [Benincasa hispida][more]
TYK10934.12.8e-8676.95cyclin-dependent kinase 11B-like [Cucumis melo var. makuwa][more]
XP_004148627.15.2e-8072.20cilia- and flagella-associated protein 251 [Cucumis sativus] >KGN54402.1 hypothe... [more]
XP_008464224.11.1e-6665.63PREDICTED: cyclin-dependent kinase 11B-like [Cucumis melo] >KAA0037727.1 cyclin-... [more]
KAG7033757.14.9e-4654.30hypothetical protein SDJN02_03482, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
AT3G51750.12.9e-0430.61unknown protein; Has 15 Blast hits to 14 proteins in 5 species: Archae - 0; Bact... [more]
AT3G51750.22.9e-0430.61unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ... [more]
AT3G51750.32.9e-0430.61unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 60..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 129..154
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..218
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..56

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G015720.1Lsi01G015720.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016310 phosphorylation
molecular_function GO:0016301 kinase activity