Lsi01G015530 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G015530
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	AMP deaminase
Location	chr01: 13710492 .. 13710902 (-)
RNA-Seq Expression	Lsi01G015530
Synteny	Lsi01G015530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATACTTATCCGTTGCACATGGCCATGGCGGCTCTGATAGGAGCCTCCGTCGTCGCTGTTTCGGCGTATTATATGCACCGGAAAACCCTAACTCAGCTGCTGGAGTTTGCCAAGACTGTGGAGAGAGAAAGGGAGCGGGACGATAATTTGGAGGTTGAGTCGCCGAGGCATTCCAAGAAGCAGCGTGGAAATTATGTGCGGCGGAAAGGGACCGGTTACAATCGGAAGGGCTCCGCTTCGTTGCCGGATGTCACTGCTATTTCCGGTGGGGCTGATGGCGACGAGAAGCGAAATGGACAGGTACTGTTGGACGTGATTCCGGCAGGGCTGCCGAGGTTACACACACTCCCTGAAGGTATGGATTCAATGGATTTCTCTTCTGGAGATTCATGGACTTTGAATGCATAA

mRNA sequence

ATGGATACTTATCCGTTGCACATGGCCATGGCGGCTCTGATAGGAGCCTCCGTCGTCGCTGTTTCGGCGTATTATATGCACCGGAAAACCCTAACTCAGCTGCTGGAGTTTGCCAAGACTGTGGAGAGAGAAAGGGAGCGGGACGATAATTTGGAGGTTGAGTCGCCGAGGCATTCCAAGAAGCAGCGTGGAAATTATGTGCGGCGGAAAGGGACCGGTTACAATCGGAAGGGCTCCGCTTCGTTGCCGGATGTCACTGCTATTTCCGGTGGGGCTGATGGCGACGAGAAGCGAAATGGACAGGTACTGTTGGACGTGATTCCGGCAGGGCTGCCGAGGTTACACACACTCCCTGAAGGTATGGATTCAATGGATTTCTCTTCTGGAGATTCATGGACTTTGAATGCATAA

Coding sequence (CDS)

ATGGATACTTATCCGTTGCACATGGCCATGGCGGCTCTGATAGGAGCCTCCGTCGTCGCTGTTTCGGCGTATTATATGCACCGGAAAACCCTAACTCAGCTGCTGGAGTTTGCCAAGACTGTGGAGAGAGAAAGGGAGCGGGACGATAATTTGGAGGTTGAGTCGCCGAGGCATTCCAAGAAGCAGCGTGGAAATTATGTGCGGCGGAAAGGGACCGGTTACAATCGGAAGGGCTCCGCTTCGTTGCCGGATGTCACTGCTATTTCCGGTGGGGCTGATGGCGACGAGAAGCGAAATGGACAGGTACTGTTGGACGTGATTCCGGCAGGGCTGCCGAGGTTACACACACTCCCTGAAGGTATGGATTCAATGGATTTCTCTTCTGGAGATTCATGGACTTTGAATGCATAA

Protein sequence

MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEVESPRHSKKQRGNYVRRKGTGYNRKGSASLPDVTAISGGADGDEKRNGQVLLDVIPAGLPRLHTLPEGMDSMDFSSGDSWTLNA

Homology

[Close]

BLAST of Lsi01G015530 vs. ExPASy Swiss-Prot
Match: O80452 (AMP deaminase OS=Arabidopsis thaliana OX=3702 GN=AMPD PE=1 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 6.8e-13
Identity = 55/126 (43.65%), Postives = 74/126 (58.73%), Query Frame = 0


Query: 8   MAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEVESPRH-SKKQRGNY 67
           +A+AAL GAS VAVS ++MH K L  +L      ER +ER +N + + P++ +  +R + 
Sbjct: 8   LALAALFGASFVAVSGFFMHFKALNLVL------ERGKERKENPDGDEPQNPTLVRRRSQ 67

Query: 68  VRRKGTGYNRKGSASLPDVTAIS---GGADGDEKR-NGQVLLDVIPAGLPRLHTLPEGMD 127
           VRRK      +  ASLPD T  +   GG  GD  R NG V +D IP GLPRLHT  EG  
Sbjct: 68  VRRKVNDQYGRSPASLPDATPFTDGGGGGGGDTGRSNGHVYVDEIPPGLPRLHTPSEGRA 127

Query: 128 SMDFSS 129
           S+  +S
Sbjct: 128 SVHGAS 127

[Close]

BLAST of Lsi01G015530 vs. ExPASy Swiss-Prot
Match: Q84NP7 (Probable AMP deaminase OS=Oryza sativa subsp. japonica OX=39947 GN=AMPD PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 8.7e-08
Identity = 32/63 (50.79%), Postives = 43/63 (68.25%), Query Frame = 0


Query: 3  TYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERER--------DDNLEVE 58
          TY LH+A+A L+GAS  A SAYYMHRKTL QLL FA++++R+  R        DD+ + +
Sbjct: 4  TYALHLAVATLLGASFAAASAYYMHRKTLDQLLRFARSLDRDHRRRNRHLLDADDDDDDD 63

[Close]

BLAST of Lsi01G015530 vs. ExPASy TrEMBL
Match: A0A6J1GDJ9 (AMP deaminase OS=Cucurbita moschata OX=3662 GN=LOC111453194 PE=3 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 8.3e-54
Identity = 114/123 (92.68%), Postives = 119/123 (96.75%), Query Frame = 0


Query: 1   MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEVESPRHSK 60
           MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEV+SP+HSK
Sbjct: 1   MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEVDSPQHSK 60

Query: 61  KQRGNYVRRKGTGYNRKGSASLPDVTAISGGADGDEKRNGQVLLDVIPAGLPRLHTLPEG 120
           KQRG +VRRKG GYNR+GSASLPDVTAISGG DGDEKRNGQVLLDVIPAGLPRLHTLPEG
Sbjct: 61  KQRG-HVRRKGNGYNRRGSASLPDVTAISGGTDGDEKRNGQVLLDVIPAGLPRLHTLPEG 120

Query: 121 MDS 124
            +S
Sbjct: 121 KNS 122

[Close]

BLAST of Lsi01G015530 vs. ExPASy TrEMBL
Match: A0A5A7UWP2 (AMP deaminase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold612G00010 PE=3 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.4e-53
Identity = 113/124 (91.13%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDD-NLEVESPRHS 60
           MD YPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVER+RERDD NL+VESPRHS
Sbjct: 1   MDAYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERDRERDDNNLDVESPRHS 60

Query: 61  KKQRGNYVRRKGTGYNRKGSASLPDVTAISGGADGDEKRNGQVLLDVIPAGLPRLHTLPE 120
           KKQRGN+VRRKGTGYNR+ SASLPDVTAISG ADGD+KRNGQVLLDVIPAGLPRLHTLPE
Sbjct: 61  KKQRGNHVRRKGTGYNRRASASLPDVTAISGAADGDDKRNGQVLLDVIPAGLPRLHTLPE 120

Query: 121 GMDS 124
           G +S
Sbjct: 121 GKNS 124

[Close]

BLAST of Lsi01G015530 vs. ExPASy TrEMBL
Match: A0A1S3CKZ6 (AMP deaminase OS=Cucumis melo OX=3656 GN=LOC103502142 PE=3 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.4e-53
Identity = 113/124 (91.13%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDD-NLEVESPRHS 60
           MD YPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVER+RERDD NL+VESPRHS
Sbjct: 1   MDAYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERDRERDDNNLDVESPRHS 60

Query: 61  KKQRGNYVRRKGTGYNRKGSASLPDVTAISGGADGDEKRNGQVLLDVIPAGLPRLHTLPE 120
           KKQRGN+VRRKGTGYNR+ SASLPDVTAISG ADGD+KRNGQVLLDVIPAGLPRLHTLPE
Sbjct: 61  KKQRGNHVRRKGTGYNRRASASLPDVTAISGAADGDDKRNGQVLLDVIPAGLPRLHTLPE 120

Query: 121 GMDS 124
           G +S
Sbjct: 121 GKNS 124

[Close]

BLAST of Lsi01G015530 vs. ExPASy TrEMBL
Match: A0A0A0L2N5 (AMP deaminase OS=Cucumis sativus OX=3659 GN=Csa_4G310720 PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 3.2e-53
Identity = 112/124 (90.32%), Postives = 118/124 (95.16%), Query Frame = 0


Query: 1   MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDD-NLEVESPRHS 60
           MD YPLHMA+AALIGASVVAVSAYYMHRKTLTQLLEFAKTVER+RERDD N + ESPRHS
Sbjct: 1   MDAYPLHMAVAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERDRERDDNNFDAESPRHS 60

Query: 61  KKQRGNYVRRKGTGYNRKGSASLPDVTAISGGADGDEKRNGQVLLDVIPAGLPRLHTLPE 120
           KKQRGNYVRRKGTGYNR+ SASLPDVTAISGGADGD+KRNGQVLLDVIPAGLPRLHTLPE
Sbjct: 61  KKQRGNYVRRKGTGYNRRASASLPDVTAISGGADGDDKRNGQVLLDVIPAGLPRLHTLPE 120

Query: 121 GMDS 124
           G +S
Sbjct: 121 GKNS 124

[Close]

BLAST of Lsi01G015530 vs. ExPASy TrEMBL
Match: A0A6J1IT55 (AMP deaminase OS=Cucurbita maxima OX=3661 GN=LOC111478175 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 9.2e-53
Identity = 112/123 (91.06%), Postives = 118/123 (95.93%), Query Frame = 0


Query: 1   MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEVESPRHSK 60
           MDTYPLHMAMAALIGAS VAVSAYYMHRKTLTQLLEFAKTVERERER+DNLEV+SP+HSK
Sbjct: 1   MDTYPLHMAMAALIGASFVAVSAYYMHRKTLTQLLEFAKTVEREREREDNLEVDSPQHSK 60

Query: 61  KQRGNYVRRKGTGYNRKGSASLPDVTAISGGADGDEKRNGQVLLDVIPAGLPRLHTLPEG 120
           KQRG +VRRKG GYNR+GSASLPDVTAISGG DGDEKRNGQVLLDVIPAGLPRLHTLPEG
Sbjct: 61  KQRG-HVRRKGNGYNRRGSASLPDVTAISGGTDGDEKRNGQVLLDVIPAGLPRLHTLPEG 120

Query: 121 MDS 124
            +S
Sbjct: 121 KNS 122

[Close]

BLAST of Lsi01G015530 vs. NCBI nr
Match: XP_038882173.1 (AMP deaminase [Benincasa hispida])

HSP 1 Score: 227.6 bits (579), Expect = 6.3e-56
Identity = 116/123 (94.31%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 1   MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEVESPRHSK 60
           MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDD+LEVESPRHSK
Sbjct: 1   MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDSLEVESPRHSK 60

Query: 61  KQRGNYVRRKGTGYNRKGSASLPDVTAISGGADGDEKRNGQVLLDVIPAGLPRLHTLPEG 120
           KQRGN+VRRKG GYNR+GS+SLPDVTAISGGADGDEKRNGQVLLDVIPAGLPRLHTLPEG
Sbjct: 61  KQRGNHVRRKGNGYNRRGSSSLPDVTAISGGADGDEKRNGQVLLDVIPAGLPRLHTLPEG 120

Query: 121 MDS 124
            +S
Sbjct: 121 KNS 123

[Close]

BLAST of Lsi01G015530 vs. NCBI nr
Match: KAG6603579.1 (AMP deaminase, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033766.1 AMP deaminase [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 219.5 bits (558), Expect = 1.7e-53
Identity = 114/123 (92.68%), Postives = 119/123 (96.75%), Query Frame = 0


Query: 1   MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEVESPRHSK 60
           MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEV+SP+HSK
Sbjct: 1   MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEVDSPQHSK 60

Query: 61  KQRGNYVRRKGTGYNRKGSASLPDVTAISGGADGDEKRNGQVLLDVIPAGLPRLHTLPEG 120
           KQRG +VRRKG GYNR+GSASLPDVTAISGG DGDEKRNGQVLLDVIPAGLPRLHTLPEG
Sbjct: 61  KQRG-HVRRKGNGYNRRGSASLPDVTAISGGTDGDEKRNGQVLLDVIPAGLPRLHTLPEG 120

Query: 121 MDS 124
            +S
Sbjct: 121 KNS 122

[Close]

BLAST of Lsi01G015530 vs. NCBI nr
Match: XP_023543519.1 (AMP deaminase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 219.5 bits (558), Expect = 1.7e-53
Identity = 114/123 (92.68%), Postives = 119/123 (96.75%), Query Frame = 0


Query: 1   MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEVESPRHSK 60
           MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEV+SP+HSK
Sbjct: 1   MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEVDSPQHSK 60

Query: 61  KQRGNYVRRKGTGYNRKGSASLPDVTAISGGADGDEKRNGQVLLDVIPAGLPRLHTLPEG 120
           KQRG +VRRKG GYNR+GSASLPDVTAISGG DGDEKRNGQVLLDVIPAGLPRLHTLPEG
Sbjct: 61  KQRG-HVRRKGNGYNRRGSASLPDVTAISGGTDGDEKRNGQVLLDVIPAGLPRLHTLPEG 120

Query: 121 MDS 124
            +S
Sbjct: 121 KNS 122

[Close]

BLAST of Lsi01G015530 vs. NCBI nr
Match: XP_022949958.1 (AMP deaminase-like [Cucurbita moschata])

HSP 1 Score: 219.5 bits (558), Expect = 1.7e-53
Identity = 114/123 (92.68%), Postives = 119/123 (96.75%), Query Frame = 0


Query: 1   MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEVESPRHSK 60
           MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEV+SP+HSK
Sbjct: 1   MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEVDSPQHSK 60

Query: 61  KQRGNYVRRKGTGYNRKGSASLPDVTAISGGADGDEKRNGQVLLDVIPAGLPRLHTLPEG 120
           KQRG +VRRKG GYNR+GSASLPDVTAISGG DGDEKRNGQVLLDVIPAGLPRLHTLPEG
Sbjct: 61  KQRG-HVRRKGNGYNRRGSASLPDVTAISGGTDGDEKRNGQVLLDVIPAGLPRLHTLPEG 120

Query: 121 MDS 124
            +S
Sbjct: 121 KNS 122

[Close]

BLAST of Lsi01G015530 vs. NCBI nr
Match: XP_008464207.1 (PREDICTED: AMP deaminase isoform X1 [Cucumis melo] >KAA0059077.1 AMP deaminase isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 218.0 bits (554), Expect = 5.0e-53
Identity = 113/124 (91.13%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDD-NLEVESPRHS 60
           MD YPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVER+RERDD NL+VESPRHS
Sbjct: 1   MDAYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERDRERDDNNLDVESPRHS 60

Query: 61  KKQRGNYVRRKGTGYNRKGSASLPDVTAISGGADGDEKRNGQVLLDVIPAGLPRLHTLPE 120
           KKQRGN+VRRKGTGYNR+ SASLPDVTAISG ADGD+KRNGQVLLDVIPAGLPRLHTLPE
Sbjct: 61  KKQRGNHVRRKGTGYNRRASASLPDVTAISGAADGDDKRNGQVLLDVIPAGLPRLHTLPE 120

Query: 121 GMDS 124
           G +S
Sbjct: 121 GKNS 124

[Close]

BLAST of Lsi01G015530 vs. TAIR 10
Match: AT2G38280.1 (AMP deaminase, putative / myoadenylate deaminase, putative )

HSP 1 Score: 75.1 bits (183), Expect = 4.9e-14
Identity = 55/126 (43.65%), Postives = 74/126 (58.73%), Query Frame = 0


Query: 8   MAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEVESPRH-SKKQRGNY 67
           +A+AAL GAS VAVS ++MH K L  +L      ER +ER +N + + P++ +  +R + 
Sbjct: 8   LALAALFGASFVAVSGFFMHFKALNLVL------ERGKERKENPDGDEPQNPTLVRRRSQ 67

Query: 68  VRRKGTGYNRKGSASLPDVTAIS---GGADGDEKR-NGQVLLDVIPAGLPRLHTLPEGMD 127
           VRRK      +  ASLPD T  +   GG  GD  R NG V +D IP GLPRLHT  EG  
Sbjct: 68  VRRKVNDQYGRSPASLPDATPFTDGGGGGGGDTGRSNGHVYVDEIPPGLPRLHTPSEGRA 127

Query: 128 SMDFSS 129
           S+  +S
Sbjct: 128 SVHGAS 127

[Close]

BLAST of Lsi01G015530 vs. TAIR 10
Match: AT2G38280.2 (AMP deaminase, putative / myoadenylate deaminase, putative )

HSP 1 Score: 75.1 bits (183), Expect = 4.9e-14
Identity = 55/126 (43.65%), Postives = 74/126 (58.73%), Query Frame = 0


Query: 8   MAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEVESPRH-SKKQRGNY 67
           +A+AAL GAS VAVS ++MH K L  +L      ER +ER +N + + P++ +  +R + 
Sbjct: 8   LALAALFGASFVAVSGFFMHFKALNLVL------ERGKERKENPDGDEPQNPTLVRRRSQ 67

Query: 68  VRRKGTGYNRKGSASLPDVTAIS---GGADGDEKR-NGQVLLDVIPAGLPRLHTLPEGMD 127
           VRRK      +  ASLPD T  +   GG  GD  R NG V +D IP GLPRLHT  EG  
Sbjct: 68  VRRKVNDQYGRSPASLPDATPFTDGGGGGGGDTGRSNGHVYVDEIPPGLPRLHTPSEGRA 127

Query: 128 SMDFSS 129
           S+  +S
Sbjct: 128 SVHGAS 127

The following BLAST results are available for this feature:

BLAST of Lsi01G015530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80452	6.8e-13	43.65	AMP deaminase OS=Arabidopsis thaliana OX=3702 GN=AMPD PE=1 SV=2	[more]
Q84NP7	8.7e-08	50.79	Probable AMP deaminase OS=Oryza sativa subsp. japonica OX=39947 GN=AMPD PE=2 SV=...	[more]

BLAST of Lsi01G015530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GDJ9	8.3e-54	92.68	AMP deaminase OS=Cucurbita moschata OX=3662 GN=LOC111453194 PE=3 SV=1	[more]
A0A5A7UWP2	2.4e-53	91.13	AMP deaminase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold612G00010 ...	[more]
A0A1S3CKZ6	2.4e-53	91.13	AMP deaminase OS=Cucumis melo OX=3656 GN=LOC103502142 PE=3 SV=1	[more]
A0A0A0L2N5	3.2e-53	90.32	AMP deaminase OS=Cucumis sativus OX=3659 GN=Csa_4G310720 PE=3 SV=1	[more]
A0A6J1IT55	9.2e-53	91.06	AMP deaminase OS=Cucurbita maxima OX=3661 GN=LOC111478175 PE=3 SV=1	[more]

BLAST of Lsi01G015530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882173.1	6.3e-56	94.31	AMP deaminase [Benincasa hispida]	[more]
KAG6603579.1	1.7e-53	92.68	AMP deaminase, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033766.1 AMP...	[more]
XP_023543519.1	1.7e-53	92.68	AMP deaminase-like [Cucurbita pepo subsp. pepo]	[more]
XP_022949958.1	1.7e-53	92.68	AMP deaminase-like [Cucurbita moschata]	[more]
XP_008464207.1	5.0e-53	91.13	PREDICTED: AMP deaminase isoform X1 [Cucumis melo] >KAA0059077.1 AMP deaminase i...	[more]

BLAST of Lsi01G015530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38280.1	4.9e-14	43.65	AMP deaminase, putative / myoadenylate deaminase, putative	[more]
AT2G38280.2	4.9e-14	43.65	AMP deaminase, putative / myoadenylate deaminase, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..61
None	No IPR available	PANTHER	PTHR11359:SF11	AMP DEAMINASE	coord: 1..125
IPR006329	AMP deaminase	PANTHER	PTHR11359	AMP DEAMINASE	coord: 1..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G015530.1	Lsi01G015530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046033	AMP metabolic process
biological_process	GO:0032264	IMP salvage
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003876	AMP deaminase activity