Lsi01G014130 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G014130
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	FUSC_2 domain-containing protein
Location	chr01: 12256370 .. 12259179 (-)
RNA-Seq Expression	Lsi01G014130
Synteny	Lsi01G014130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTACAGAGCTAAAAGCCTTTGTTAAGTTCTTCCTTTGGCTCTCCTCTCTCTCCTTATTTCTTCCTCTTATATACACTATATAAATATACATACCGCTAATAAATGGCGGCGACGGCGATGGTATGGCAAATGCGTCTGGGCTTGGCTCTACGAGCGGCTTTGGCATGTGGCATAGTTGGCGCGGTCACGATTTTTGGGCCGGCGCCGGTTAGACGGTTACTGGCTTTCTCGGCTTTTTCTTACTTCACCACCATTTCCATAGTACTTTCCGACGCGATTTCGGTCGGCGACGCCGTGAGGGGTGTGTGGCACGTGATGTGGGCAGTGGCGTCGGTGATGGTCTTGTCTGTGCCGTGCTTGTGGCTGATCGGACCGGGACGGTTCACGACAGCGGCATCGGCGGCGGTGGCGGTGGCCATCAGTGCGTTTGTGGTGGCGCTGCCGGAGCGGACCCACTTGCTGACGAAGCGAATTGCTTTTGGACAGCTGGTGATCGTGTACGTCGGGGCAGTTATTCACGGCGGTCAGATCAGTTTTTTTATGCACCCAATTCGTGTTGCGTCCAGTACGGCTGCCGGAGCTCTCGCCGCCGTTGCCGCCATGATGATTCCCTTCCCACGCCTCGCCTTTTTCCAGGTAAAATCAAGCTCCAGAAATAATTTTCATAATTACGACCAAAATTTTAGTTAATTTTTTTTAAAAATTTTTATTCAACGATAATTTTCCTTCTCCGATAATTTGCTCCTTATTTATAATTACCTTTTCTTTTTATAATTATTATTCGAGCATACTTTCGTTGGTATTTCAGTTTTAGGTGTAATAATATATATATATATATATATATGAATTTTTAAACATAGAAAAGTAAGAGAAATTATTTATACAAAATAGTAAAAGTTTTAGATAGTTGTAATAGGCGCGGATAGAAGTCTATCAGGGATAGAAATGATAGAAGTCTATCAATATCTATCAGTGTTTTTTTTTTTTTGCTATTTTCTATAAATATTTTGACATTTTTTCTATCGGTGAAAAATTCTCTATAAGAAATAGTTATTACTTTAATTCTTTTAGAATATTACATCACAATTATGAAAGGATGCTTGAACTTTTTAACCTTGTATTTGAGAATTTATGTCTTTTAAATATGAAAAATATTTATAAGCATCTTGAGTGACATCTATTTTATTTACAATCTACCTTTTTATCCGATCATGATTTGTCACGTGATAATTCTTTTTTAAAAATATCTTTAATTTTTTTAATTTGTGGTTGGACTTCATTACTATTTAATTATTGTTAGATATTATATTAAATTTGCATTCACCTATAAACTTAAGCTTCTGGGTCATAATATAACTAAAAATAAAGTAATTAAATAAAAATAAATAAAGTAAAAAAATATTGGAGGCATGTAACTAAAAATATTAAAATTTTAAAACGTTTAACTTAAAAAAAAAGATTAAAAAAATTATTTTTCATTTCACCTTAGAGGTTAATTTAGAGATAGAAAATAGATAAATAAAATTAAAAACAAAACCCATTAAAATATAATCAATCAAACGTTATGAAATCAAAGATCACTATAAAAAGTCTAATTGTACAAATATATATCAATAATTAAATTGTATAGCATAATTATTCTCTTCACCACAATAATATTCAAAATTTCATATGAACAAAAAAAAGATTAATTGATTTTTATTTTATTCTTTAGTTTAAAGTAAAAAAATTATTCACTCTACTCAGTTTATGATATATATATATACGAGCAACACACATTCTCAAAATTCATAGTTGTAAATGAACAATTAAAAGATTTTTTTTTTATTTTTTAAAATAAAATGGTTTCGGCAATGTTGAATAAATAGGTAAGAAGTAATTGACATAAATTTATTTTCTCGAAGTCAAAAATTTAAATTCAATTCTCATACCCCACTTATTGTACTAAAAAATAAAATTACACATCAAAGTATAATAAATGGTGTATTTTAAATTTAAAAGTCAAAGTTTAAAGGTATTTATTATAATAATTCATATAGATTTATATGCTATGTCTCTAACTAATTTTAAAGTTAAATGGTGTGTTTGATATTTAAATTATAAGTTTGTTCAATCAAATCTCTACCCTTTTTATGTGGTATGTGGTGTTTAATAAAATTTTGAACTTCTTTCTATTAATTTCCTTTAAAAAAAATCAAAGAAATAAATACTTTTGGTATTTTATAATTGCTATAAAAAAAATACCTTTAGTATTTATTCCCACAAAATGCCATTCTCTTAGAATATATGTGCCTATCAATTATTGTATAATTGCAATGAACGTGTACAAATTAAAGTGTTTAAAATTCATTCCATCTAAATATACGATTCATTCCATGTAATATATAATTATTATTTGACATGAAAATAAATTTAGAATATTTTTTTCTAAAAAGAGAAGGAAAATACCTGAATGCTCCCTAGTGTGCAGTCCAATAAGATACTGCCACATGGCATATTTATATTTCTTTTTTTTTTTTATTTAAGTTTTTGTGTATATAAAAATGAGGAGTGTAAAATTAGGTACAGTCTCGAGAATATGTTTTGATTGATATTATTTTGGTATGTGGGTGTAGATAAGGAAGCTTAGTAAGGGTTATTGTGAGAATGGTTGTGAAAGAATTGAGGCAATGGTGGAAGGGGTGGGTGCAAAGAGCAAAGCAGAGACAGTTGCATTAATGGTTGAAGCCAAGTCTCTATCAACAAATGGAACAAAGCTTCTTCAAAGTATCAAAGCCAATATGGTAATTTTTCATCAACTAAAATAG

mRNA sequence

TTTTTACAGAGCTAAAAGCCTTTGTTAAGTTCTTCCTTTGGCTCTCCTCTCTCTCCTTATTTCTTCCTCTTATATACACTATATAAATATACATACCGCTAATAAATGGCGGCGACGGCGATGGTATGGCAAATGCGTCTGGGCTTGGCTCTACGAGCGGCTTTGGCATGTGGCATAGTTGGCGCGGTCACGATTTTTGGGCCGGCGCCGGTTAGACGGTTACTGGCTTTCTCGGCTTTTTCTTACTTCACCACCATTTCCATAGTACTTTCCGACGCGATTTCGGTCGGCGACGCCGTGAGGGGTGTGTGGCACGTGATGTGGGCAGTGGCGTCGGTGATGGTCTTGTCTGTGCCGTGCTTGTGGCTGATCGGACCGGGACGGTTCACGACAGCGGCATCGGCGGCGGTGGCGGTGGCCATCAGTGCGTTTGTGGTGGCGCTGCCGGAGCGGACCCACTTGCTGACGAAGCGAATTGCTTTTGGACAGCTGGTGATCGTGTACGTCGGGGCAGTTATTCACGGCGGTCAGATCAGTTTTTTTATGCACCCAATTCGTGTTGCGTCCAGTACGGCTGCCGGAGCTCTCGCCGCCGTTGCCGCCATGATGATTCCCTTCCCACGCCTCGCCTTTTTCCAGATAAGGAAGCTTAGTAAGGGTTATTGTGAGAATGGTTGTGAAAGAATTGAGGCAATGGTGGAAGGGGTGGGTGCAAAGAGCAAAGCAGAGACAGTTGCATTAATGGTTGAAGCCAAGTCTCTATCAACAAATGGAACAAAGCTTCTTCAAAGTATCAAAGCCAATATGGTAATTTTTCATCAACTAAAATAG

Coding sequence (CDS)

ATGGCGGCGACGGCGATGGTATGGCAAATGCGTCTGGGCTTGGCTCTACGAGCGGCTTTGGCATGTGGCATAGTTGGCGCGGTCACGATTTTTGGGCCGGCGCCGGTTAGACGGTTACTGGCTTTCTCGGCTTTTTCTTACTTCACCACCATTTCCATAGTACTTTCCGACGCGATTTCGGTCGGCGACGCCGTGAGGGGTGTGTGGCACGTGATGTGGGCAGTGGCGTCGGTGATGGTCTTGTCTGTGCCGTGCTTGTGGCTGATCGGACCGGGACGGTTCACGACAGCGGCATCGGCGGCGGTGGCGGTGGCCATCAGTGCGTTTGTGGTGGCGCTGCCGGAGCGGACCCACTTGCTGACGAAGCGAATTGCTTTTGGACAGCTGGTGATCGTGTACGTCGGGGCAGTTATTCACGGCGGTCAGATCAGTTTTTTTATGCACCCAATTCGTGTTGCGTCCAGTACGGCTGCCGGAGCTCTCGCCGCCGTTGCCGCCATGATGATTCCCTTCCCACGCCTCGCCTTTTTCCAGATAAGGAAGCTTAGTAAGGGTTATTGTGAGAATGGTTGTGAAAGAATTGAGGCAATGGTGGAAGGGGTGGGTGCAAAGAGCAAAGCAGAGACAGTTGCATTAATGGTTGAAGCCAAGTCTCTATCAACAAATGGAACAAAGCTTCTTCAAAGTATCAAAGCCAATATGGTAATTTTTCATCAACTAAAATAG

Protein sequence

MAATAMVWQMRLGLALRAALACGIVGAVTIFGPAPVRRLLAFSAFSYFTTISIVLSDAISVGDAVRGVWHVMWAVASVMVLSVPCLWLIGPGRFTTAASAAVAVAISAFVVALPERTHLLTKRIAFGQLVIVYVGAVIHGGQISFFMHPIRVASSTAAGALAAVAAMMIPFPRLAFFQIRKLSKGYCENGCERIEAMVEGVGAKSKAETVALMVEAKSLSTNGTKLLQSIKANMVIFHQLK

Homology

[Close]

BLAST of Lsi01G014130 vs. ExPASy TrEMBL
Match: A0A1S3BHE3 (uncharacterized protein LOC103490100 OS=Cucumis melo OX=3656 GN=LOC103490100 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 3.7e-105
Identity = 207/233 (88.84%), Postives = 221/233 (94.85%), Query Frame = 0


Query: 2   AATAMVWQMRLGLALRAALACGIVGAVTIFGPAPVRRLLAFSAFSYFTTISIVLSDAISV 61
           AAT +VW+MRLGLALRAALACGIVGAVT+FGPAPVRRLLAFSAFSYFTTISIVLSDA+S+
Sbjct: 5   AATMIVWRMRLGLALRAALACGIVGAVTVFGPAPVRRLLAFSAFSYFTTISIVLSDAVSL 64

Query: 62  GDAVRGVWHVMWAVASVMVLSVPCLWLIGPGRFTTAASAAVAVAISAFVVALPERTHLLT 121
           GDAVRGVWHVMWAV  V+V S+PCLWLIGPGRFT+AASAAVAVA+SAFVVALPERTHLLT
Sbjct: 65  GDAVRGVWHVMWAVVFVVVSSLPCLWLIGPGRFTSAASAAVAVAVSAFVVALPERTHLLT 124

Query: 122 KRIAFGQLVIVYVGAVIHGGQISFFMHPIRVASSTAAGALAAVAAMMIPFPRLAFFQIRK 181
           KRIAFGQLVIVYVG VIHGGQISF  HPIRVASSTAAGALAAVAAMMIPFPRLAFFQIRK
Sbjct: 125 KRIAFGQLVIVYVGTVIHGGQISFVKHPIRVASSTAAGALAAVAAMMIPFPRLAFFQIRK 184

Query: 182 LSKGYCENGCERIEAMVEGVGAKSKAETVALMVEAKSLSTNGTKLLQSIKANM 235
           LSKGYCENG +R+EAMVEGVGAK+K E VA MVEAKSLSTN TKLLQ+IK+NM
Sbjct: 185 LSKGYCENGWKRVEAMVEGVGAKTKGEAVAFMVEAKSLSTNATKLLQTIKSNM 237

[Close]

BLAST of Lsi01G014130 vs. ExPASy TrEMBL
Match: A0A0A0L0W0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G294940 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 8.2e-105
Identity = 206/233 (88.41%), Postives = 220/233 (94.42%), Query Frame = 0


Query: 2   AATAMVWQMRLGLALRAALACGIVGAVTIFGPAPVRRLLAFSAFSYFTTISIVLSDAISV 61
           AAT +VW+MRLGLALRAALACGIVGAVTIFGPAP+RRLLAFSAFSYFTTIS++LSD +SV
Sbjct: 5   AATMIVWRMRLGLALRAALACGIVGAVTIFGPAPLRRLLAFSAFSYFTTISMILSDTVSV 64

Query: 62  GDAVRGVWHVMWAVASVMVLSVPCLWLIGPGRFTTAASAAVAVAISAFVVALPERTHLLT 121
           GDAVRGVWHVMWAV  V+V SVPCLWLIGPGRFT+AASAA+AVA+S FVVALPERTHLLT
Sbjct: 65  GDAVRGVWHVMWAVVFVLVSSVPCLWLIGPGRFTSAASAAIAVAVSGFVVALPERTHLLT 124

Query: 122 KRIAFGQLVIVYVGAVIHGGQISFFMHPIRVASSTAAGALAAVAAMMIPFPRLAFFQIRK 181
           KRIAFGQLVIVYVG VIHGGQISF  HPIRVASSTAAGALAAVAAMMIPFPRLAFFQIRK
Sbjct: 125 KRIAFGQLVIVYVGTVIHGGQISFVKHPIRVASSTAAGALAAVAAMMIPFPRLAFFQIRK 184

Query: 182 LSKGYCENGCERIEAMVEGVGAKSKAETVALMVEAKSLSTNGTKLLQSIKANM 235
           LSKGYCENG +RIEAMVEGVGAK+K E VALMVEAKSLSTN TKLLQ+IK+NM
Sbjct: 185 LSKGYCENGWKRIEAMVEGVGAKTKGEAVALMVEAKSLSTNATKLLQTIKSNM 237

[Close]

BLAST of Lsi01G014130 vs. ExPASy TrEMBL
Match: A0A5D3DIP8 (FUSC_2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00100 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 5.3e-104
Identity = 204/229 (89.08%), Postives = 218/229 (95.20%), Query Frame = 0


Query: 6   MVWQMRLGLALRAALACGIVGAVTIFGPAPVRRLLAFSAFSYFTTISIVLSDAISVGDAV 65
           +VW+MRLGLALRAALACGIVGAVT+FGPAPVRRLLAFSAFSYFTTISIVLSDA+S+GDAV
Sbjct: 2   IVWRMRLGLALRAALACGIVGAVTVFGPAPVRRLLAFSAFSYFTTISIVLSDAVSLGDAV 61

Query: 66  RGVWHVMWAVASVMVLSVPCLWLIGPGRFTTAASAAVAVAISAFVVALPERTHLLTKRIA 125
           RGVWHVMWAV  V+V S+PCLWLIGPGRFT+AASAAVAVA+SAFVVALPERTHLLTKRIA
Sbjct: 62  RGVWHVMWAVVFVVVSSLPCLWLIGPGRFTSAASAAVAVAVSAFVVALPERTHLLTKRIA 121

Query: 126 FGQLVIVYVGAVIHGGQISFFMHPIRVASSTAAGALAAVAAMMIPFPRLAFFQIRKLSKG 185
           FGQLVIVYVG VIHGGQISF  HPIRVASSTAAGALAAVAAMMIPFPRLAFFQIRKLSKG
Sbjct: 122 FGQLVIVYVGTVIHGGQISFVKHPIRVASSTAAGALAAVAAMMIPFPRLAFFQIRKLSKG 181

Query: 186 YCENGCERIEAMVEGVGAKSKAETVALMVEAKSLSTNGTKLLQSIKANM 235
           YCENG +R+EAMVEGVGAK+K E VA MVEAKSLSTN TKLLQ+IK+NM
Sbjct: 182 YCENGWKRVEAMVEGVGAKTKGEAVAFMVEAKSLSTNATKLLQTIKSNM 230

[Close]

BLAST of Lsi01G014130 vs. ExPASy TrEMBL
Match: A0A6J1HGH0 (uncharacterized protein LOC111463346 OS=Cucurbita moschata OX=3662 GN=LOC111463346 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 6.8e-91
Identity = 179/234 (76.50%), Postives = 206/234 (88.03%), Query Frame = 0


Query: 1   MAATAMVWQMRLGLALRAALACGIVGAVTIFGPAPVRRLLAFSAFSYFTTISIVLSDAIS 60
           +  TA++W++RLG ALRAA AC ++G V +FGPA VR+LL+F AFSYFTTISIVL+DA+S
Sbjct: 5   VTTTAVLWRIRLGSALRAAFACSLIGGVMMFGPASVRKLLSFPAFSYFTTISIVLTDAVS 64

Query: 61  VGDAVRGVWHVMWAVASVMVLSVPCLWLIGPGRFTTAASAAVAVAISAFVVALPERTHLL 120
           +GDAVRGVWHVMWAV SV+VLSVPCL+L+GP RFT   SAAVAVAISAFVVALP RTH+L
Sbjct: 65  IGDAVRGVWHVMWAVVSVLVLSVPCLYLVGPERFTGGLSAAVAVAISAFVVALPMRTHVL 124

Query: 121 TKRIAFGQLVIVYVGAVIHGGQISFFMHPIRVASSTAAGALAAVAAMMIPFPRLAFFQIR 180
           TKRIAFGQLVIVYVG V+HGGQ SFFMHPIRVASSTAAGALAAV AM++P+PRLA FQIR
Sbjct: 125 TKRIAFGQLVIVYVGTVVHGGQTSFFMHPIRVASSTAAGALAAVVAMVLPYPRLASFQIR 184

Query: 181 KLSKGYCENGCERIEAMVEGVGAKSKAETVALMVEAKSLSTNGTKLLQSIKANM 235
           KLS+ YCENGCER  AMVEG GAK+KAE VA M EAK+LST GTKLL+SI+ N+
Sbjct: 185 KLSRAYCENGCERTGAMVEGFGAKTKAEAVASMAEAKALSTTGTKLLRSIQPNL 238

[Close]

BLAST of Lsi01G014130 vs. ExPASy TrEMBL
Match: A0A6J1I6Q2 (uncharacterized protein LOC111471229 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471229 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 3.7e-89
Identity = 177/234 (75.64%), Postives = 205/234 (87.61%), Query Frame = 0


Query: 1   MAATAMVWQMRLGLALRAALACGIVGAVTIFGPAPVRRLLAFSAFSYFTTISIVLSDAIS 60
           +  TA++W++RLG ALRAA AC ++G V +FGPA V +LL+F AFSYFTTISIVL+DA+S
Sbjct: 5   VTTTAVLWRIRLGSALRAAFACSLIGGVMMFGPASVSQLLSFPAFSYFTTISIVLTDAVS 64

Query: 61  VGDAVRGVWHVMWAVASVMVLSVPCLWLIGPGRFTTAASAAVAVAISAFVVALPERTHLL 120
           +GDAVRGVWHVMWAV SV+VLSVPCL+L+GP RFT   SAAVAVAISAFVVALP RTH+L
Sbjct: 65  IGDAVRGVWHVMWAVVSVLVLSVPCLYLVGPERFTGGLSAAVAVAISAFVVALPMRTHVL 124

Query: 121 TKRIAFGQLVIVYVGAVIHGGQISFFMHPIRVASSTAAGALAAVAAMMIPFPRLAFFQIR 180
           TKRIAFGQLVIVYVG VIHGGQ SF MHPIRVASSTAAGALAAV AM++P+PRLA FQIR
Sbjct: 125 TKRIAFGQLVIVYVGTVIHGGQTSFIMHPIRVASSTAAGALAAVVAMVLPYPRLASFQIR 184

Query: 181 KLSKGYCENGCERIEAMVEGVGAKSKAETVALMVEAKSLSTNGTKLLQSIKANM 235
           KLS+ YC+NGCER+ AMVEG GAK+KAE VA M EAKSLST GTKLL+SI+ ++
Sbjct: 185 KLSRAYCDNGCERMGAMVEGFGAKTKAEAVASMAEAKSLSTTGTKLLRSIQPHL 238

[Close]

BLAST of Lsi01G014130 vs. NCBI nr
Match: XP_038882782.1 (uncharacterized protein LOC120073933 isoform X2 [Benincasa hispida])

HSP 1 Score: 401.7 bits (1031), Expect = 4.3e-108
Identity = 214/234 (91.45%), Postives = 224/234 (95.73%), Query Frame = 0


Query: 1   MAATAMVWQMRLGLALRAALACGIVGAVTIFGPAPVRRLLAFSAFSYFTTISIVLSDAIS 60
           +AATA+VW+MRLGLALRAALAC IVG VTIFGPAPVRRLLAFSAFSY TTISIVLSDA+S
Sbjct: 4   VAATAIVWRMRLGLALRAALACAIVGVVTIFGPAPVRRLLAFSAFSYVTTISIVLSDAVS 63

Query: 61  VGDAVRGVWHVMWAVASVMVLSVPCLWLIGPGRFTTAASAAVAVAISAFVVALPERTHLL 120
           VGDAVRGVWHVMWAV SV+VLSVPCLWLIGPGRFT AASAA+AV +SAFVVALPERTHLL
Sbjct: 64  VGDAVRGVWHVMWAVVSVVVLSVPCLWLIGPGRFTGAASAALAVIVSAFVVALPERTHLL 123

Query: 121 TKRIAFGQLVIVYVGAVIHGGQISFFMHPIRVASSTAAGALAAVAAMMIPFPRLAFFQIR 180
           TKRIAFGQLVIVYVG VIHGGQISF MHPIRVASSTAAGALAAVAAMM+PFPRLAFFQIR
Sbjct: 124 TKRIAFGQLVIVYVGTVIHGGQISFVMHPIRVASSTAAGALAAVAAMMLPFPRLAFFQIR 183

Query: 181 KLSKGYCENGCERIEAMVEGVGAKSKAETVALMVEAKSLSTNGTKLLQSIKANM 235
           KLS+GYCENGCERI AMVEGVGAKSKAE +ALMVEAKSLSTNGTKLLQSIKANM
Sbjct: 184 KLSRGYCENGCERIGAMVEGVGAKSKAEAIALMVEAKSLSTNGTKLLQSIKANM 237

[Close]

BLAST of Lsi01G014130 vs. NCBI nr
Match: XP_038882781.1 (uncharacterized protein LOC120073933 isoform X1 [Benincasa hispida])

HSP 1 Score: 401.7 bits (1031), Expect = 4.3e-108
Identity = 214/234 (91.45%), Postives = 224/234 (95.73%), Query Frame = 0


Query: 1   MAATAMVWQMRLGLALRAALACGIVGAVTIFGPAPVRRLLAFSAFSYFTTISIVLSDAIS 60
           +AATA+VW+MRLGLALRAALAC IVG VTIFGPAPVRRLLAFSAFSY TTISIVLSDA+S
Sbjct: 4   VAATAIVWRMRLGLALRAALACAIVGVVTIFGPAPVRRLLAFSAFSYVTTISIVLSDAVS 63

Query: 61  VGDAVRGVWHVMWAVASVMVLSVPCLWLIGPGRFTTAASAAVAVAISAFVVALPERTHLL 120
           VGDAVRGVWHVMWAV SV+VLSVPCLWLIGPGRFT AASAA+AV +SAFVVALPERTHLL
Sbjct: 64  VGDAVRGVWHVMWAVVSVVVLSVPCLWLIGPGRFTGAASAALAVIVSAFVVALPERTHLL 123

Query: 121 TKRIAFGQLVIVYVGAVIHGGQISFFMHPIRVASSTAAGALAAVAAMMIPFPRLAFFQIR 180
           TKRIAFGQLVIVYVG VIHGGQISF MHPIRVASSTAAGALAAVAAMM+PFPRLAFFQIR
Sbjct: 124 TKRIAFGQLVIVYVGTVIHGGQISFVMHPIRVASSTAAGALAAVAAMMLPFPRLAFFQIR 183

Query: 181 KLSKGYCENGCERIEAMVEGVGAKSKAETVALMVEAKSLSTNGTKLLQSIKANM 235
           KLS+GYCENGCERI AMVEGVGAKSKAE +ALMVEAKSLSTNGTKLLQSIKANM
Sbjct: 184 KLSRGYCENGCERIGAMVEGVGAKSKAEAIALMVEAKSLSTNGTKLLQSIKANM 237

[Close]

BLAST of Lsi01G014130 vs. NCBI nr
Match: XP_008447690.2 (PREDICTED: uncharacterized protein LOC103490100 [Cucumis melo])

HSP 1 Score: 391.0 bits (1003), Expect = 7.6e-105
Identity = 207/233 (88.84%), Postives = 221/233 (94.85%), Query Frame = 0


Query: 2   AATAMVWQMRLGLALRAALACGIVGAVTIFGPAPVRRLLAFSAFSYFTTISIVLSDAISV 61
           AAT +VW+MRLGLALRAALACGIVGAVT+FGPAPVRRLLAFSAFSYFTTISIVLSDA+S+
Sbjct: 5   AATMIVWRMRLGLALRAALACGIVGAVTVFGPAPVRRLLAFSAFSYFTTISIVLSDAVSL 64

Query: 62  GDAVRGVWHVMWAVASVMVLSVPCLWLIGPGRFTTAASAAVAVAISAFVVALPERTHLLT 121
           GDAVRGVWHVMWAV  V+V S+PCLWLIGPGRFT+AASAAVAVA+SAFVVALPERTHLLT
Sbjct: 65  GDAVRGVWHVMWAVVFVVVSSLPCLWLIGPGRFTSAASAAVAVAVSAFVVALPERTHLLT 124

Query: 122 KRIAFGQLVIVYVGAVIHGGQISFFMHPIRVASSTAAGALAAVAAMMIPFPRLAFFQIRK 181
           KRIAFGQLVIVYVG VIHGGQISF  HPIRVASSTAAGALAAVAAMMIPFPRLAFFQIRK
Sbjct: 125 KRIAFGQLVIVYVGTVIHGGQISFVKHPIRVASSTAAGALAAVAAMMIPFPRLAFFQIRK 184

Query: 182 LSKGYCENGCERIEAMVEGVGAKSKAETVALMVEAKSLSTNGTKLLQSIKANM 235
           LSKGYCENG +R+EAMVEGVGAK+K E VA MVEAKSLSTN TKLLQ+IK+NM
Sbjct: 185 LSKGYCENGWKRVEAMVEGVGAKTKGEAVAFMVEAKSLSTNATKLLQTIKSNM 237

[Close]

BLAST of Lsi01G014130 vs. NCBI nr
Match: XP_004142207.1 (uncharacterized protein LOC101207339 [Cucumis sativus] >XP_031739552.1 uncharacterized protein LOC101207339 [Cucumis sativus] >KGN54237.1 hypothetical protein Csa_018082 [Cucumis sativus])

HSP 1 Score: 389.8 bits (1000), Expect = 1.7e-104
Identity = 206/233 (88.41%), Postives = 220/233 (94.42%), Query Frame = 0


Query: 2   AATAMVWQMRLGLALRAALACGIVGAVTIFGPAPVRRLLAFSAFSYFTTISIVLSDAISV 61
           AAT +VW+MRLGLALRAALACGIVGAVTIFGPAP+RRLLAFSAFSYFTTIS++LSD +SV
Sbjct: 5   AATMIVWRMRLGLALRAALACGIVGAVTIFGPAPLRRLLAFSAFSYFTTISMILSDTVSV 64

Query: 62  GDAVRGVWHVMWAVASVMVLSVPCLWLIGPGRFTTAASAAVAVAISAFVVALPERTHLLT 121
           GDAVRGVWHVMWAV  V+V SVPCLWLIGPGRFT+AASAA+AVA+S FVVALPERTHLLT
Sbjct: 65  GDAVRGVWHVMWAVVFVLVSSVPCLWLIGPGRFTSAASAAIAVAVSGFVVALPERTHLLT 124

Query: 122 KRIAFGQLVIVYVGAVIHGGQISFFMHPIRVASSTAAGALAAVAAMMIPFPRLAFFQIRK 181
           KRIAFGQLVIVYVG VIHGGQISF  HPIRVASSTAAGALAAVAAMMIPFPRLAFFQIRK
Sbjct: 125 KRIAFGQLVIVYVGTVIHGGQISFVKHPIRVASSTAAGALAAVAAMMIPFPRLAFFQIRK 184

Query: 182 LSKGYCENGCERIEAMVEGVGAKSKAETVALMVEAKSLSTNGTKLLQSIKANM 235
           LSKGYCENG +RIEAMVEGVGAK+K E VALMVEAKSLSTN TKLLQ+IK+NM
Sbjct: 185 LSKGYCENGWKRIEAMVEGVGAKTKGEAVALMVEAKSLSTNATKLLQTIKSNM 237

[Close]

BLAST of Lsi01G014130 vs. NCBI nr
Match: KAA0032625.1 (FUSC_2 domain-containing protein [Cucumis melo var. makuwa] >TYK23507.1 FUSC_2 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 387.1 bits (993), Expect = 1.1e-103
Identity = 204/229 (89.08%), Postives = 218/229 (95.20%), Query Frame = 0


Query: 6   MVWQMRLGLALRAALACGIVGAVTIFGPAPVRRLLAFSAFSYFTTISIVLSDAISVGDAV 65
           +VW+MRLGLALRAALACGIVGAVT+FGPAPVRRLLAFSAFSYFTTISIVLSDA+S+GDAV
Sbjct: 2   IVWRMRLGLALRAALACGIVGAVTVFGPAPVRRLLAFSAFSYFTTISIVLSDAVSLGDAV 61

Query: 66  RGVWHVMWAVASVMVLSVPCLWLIGPGRFTTAASAAVAVAISAFVVALPERTHLLTKRIA 125
           RGVWHVMWAV  V+V S+PCLWLIGPGRFT+AASAAVAVA+SAFVVALPERTHLLTKRIA
Sbjct: 62  RGVWHVMWAVVFVVVSSLPCLWLIGPGRFTSAASAAVAVAVSAFVVALPERTHLLTKRIA 121

Query: 126 FGQLVIVYVGAVIHGGQISFFMHPIRVASSTAAGALAAVAAMMIPFPRLAFFQIRKLSKG 185
           FGQLVIVYVG VIHGGQISF  HPIRVASSTAAGALAAVAAMMIPFPRLAFFQIRKLSKG
Sbjct: 122 FGQLVIVYVGTVIHGGQISFVKHPIRVASSTAAGALAAVAAMMIPFPRLAFFQIRKLSKG 181

Query: 186 YCENGCERIEAMVEGVGAKSKAETVALMVEAKSLSTNGTKLLQSIKANM 235
           YCENG +R+EAMVEGVGAK+K E VA MVEAKSLSTN TKLLQ+IK+NM
Sbjct: 182 YCENGWKRVEAMVEGVGAKTKGEAVAFMVEAKSLSTNATKLLQTIKSNM 230

[Close]

BLAST of Lsi01G014130 vs. TAIR 10
Match: AT3G09450.1 (CONTAINS InterPro DOMAIN/s: Fusaric acid resistance protein, conserved region (InterPro:IPR006726); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G28780.1); Has 503 Blast hits to 494 proteins in 215 species: Archae - 0; Bacteria - 423; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). )

HSP 1 Score: 161.4 bits (407), Expect = 9.1e-40
Identity = 99/226 (43.81%), Postives = 139/226 (61.50%), Query Frame = 0


Query: 8   WQMRLGLALRAALACGIVGAVTIFGPAPVRRLLAFSAFSYFTTISIVLSDA-ISVGDAVR 67
           W  RLGLALR A+AC IV   T++GP P+R    F AFSY TTI I LSDA  + G+ ++
Sbjct: 6   WLERLGLALRTAMACLIVSLTTLYGPKPLRHFTTFPAFSYLTTILIWLSDAEPTYGEVLK 65

Query: 68  GVWHVMWAVASVMVLSVPCLWLIGPGRFTTAASAAVAVAISAFVVALPERTHLLTKRIAF 127
               V +A    + +++  + ++GP        A VAVA+++F+VA P  T LLTKRIAF
Sbjct: 66  CCLDVSYATFQTIAIALVSVLVVGPASLGNGLVAPVAVALASFIVAFPVSTSLLTKRIAF 125

Query: 128 GQLVIVYVGAVIHGGQIS-FFMHPIRVASSTAAGALAAVAAMMIPFPRLAFFQIRKLSKG 187
           GQ+V+VYV  V+  G+++  FM P+ VA STA GA+A++ A+++PFPRLA  Q+ K  K 
Sbjct: 126 GQIVVVYVTFVVFNGEVAHVFMLPVHVAGSTALGAIASLIAVLLPFPRLAHSQMSKGCKL 185

Query: 188 YCENGCERIEAMVEGVGAKSKAETVALMVEAKSLSTNGTKLLQSIK 232
           Y EN  ER+   VE + A+       L+  A SLS      L++IK
Sbjct: 186 YAENALERLNMFVEIMMARDNTTAQVLIARAASLSAAAKNTLKNIK 231

[Close]

BLAST of Lsi01G014130 vs. TAIR 10
Match: AT2G28780.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF939, bacterial (InterPro:IPR010343); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09450.1); Has 671 Blast hits to 667 proteins in 305 species: Archae - 0; Bacteria - 588; Metazoa - 0; Fungi - 2; Plants - 66; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). )

HSP 1 Score: 142.9 bits (359), Expect = 3.4e-34
Identity = 88/226 (38.94%), Postives = 141/226 (62.39%), Query Frame = 0


Query: 7   VWQMRLGLALRAALACGIVGAVTIFGPAPVRRLLAFSAFSYFTTISIVLSDAISVGDAVR 66
           +W+  L  A R ALAC IVG+ T++GP  + R +AF AFSY T I ++++DA ++GD +R
Sbjct: 10  MWRTCLASAFRTALACTIVGSATLYGPEWINRHVAFPAFSYVTVI-LIITDA-TLGDTLR 69

Query: 67  GVWHVMWAVASVMVLSVPCLWLIGPGRFTTAASAAVAVAISAFVVALP-ERTHLLTKRIA 126
           G W  ++A    +  ++  L LI P R  TA + A+A A++AFVV LP   THL+ KRIA
Sbjct: 70  GCWLALYATCQSVGPAIVTLKLIRPARL-TAETTALAAALAAFVVVLPNSSTHLVAKRIA 129

Query: 127 FGQLVIVYVGAVIHGGQISFFMHPIRVASSTAAGALAAVAAMMIPFPRLAFFQIRKLSKG 186
            GQ+V++YV   I G +    MHP++VA+STA G +A V A+++P PRLA  ++++  K 
Sbjct: 130 LGQIVLIYVIGYIKGAKTDPVMHPLQVAASTALGVVACVLALLVPLPRLATCEVKQSCKE 189

Query: 187 YCENGCERIEAMVEGVGAKSKAETVALMVEAKSLSTNGTKLLQSIK 232
             +N   R++  ++   +       A + +A+ L+ + +KL Q++K
Sbjct: 190 LGQNVTTRVKLYMKAFCSDDSMSATASVSQARVLARSSSKLYQTLK 232

The following BLAST results are available for this feature:

BLAST of Lsi01G014130 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi01G014130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BHE3	3.7e-105	88.84	uncharacterized protein LOC103490100 OS=Cucumis melo OX=3656 GN=LOC103490100 PE=...	[more]
A0A0A0L0W0	8.2e-105	88.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G294940 PE=4 SV=1	[more]
A0A5D3DIP8	5.3e-104	89.08	FUSC_2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A6J1HGH0	6.8e-91	76.50	uncharacterized protein LOC111463346 OS=Cucurbita moschata OX=3662 GN=LOC1114633...	[more]
A0A6J1I6Q2	3.7e-89	75.64	uncharacterized protein LOC111471229 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Lsi01G014130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882782.1	4.3e-108	91.45	uncharacterized protein LOC120073933 isoform X2 [Benincasa hispida]	[more]
XP_038882781.1	4.3e-108	91.45	uncharacterized protein LOC120073933 isoform X1 [Benincasa hispida]	[more]
XP_008447690.2	7.6e-105	88.84	PREDICTED: uncharacterized protein LOC103490100 [Cucumis melo]	[more]
XP_004142207.1	1.7e-104	88.41	uncharacterized protein LOC101207339 [Cucumis sativus] >XP_031739552.1 uncharact...	[more]
KAA0032625.1	1.1e-103	89.08	FUSC_2 domain-containing protein [Cucumis melo var. makuwa] >TYK23507.1 FUSC_2 d...	[more]

BLAST of Lsi01G014130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09450.1	9.1e-40	43.81	CONTAINS InterPro DOMAIN/s: Fusaric acid resistance protein, conserved region (I...	[more]
AT2G28780.1	3.4e-34	38.94	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondr...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR30509:SF34	F3L24.34 PROTEIN	coord: 3..234
None	No IPR available	PANTHER	PTHR30509	P-HYDROXYBENZOIC ACID EFFLUX PUMP SUBUNIT-RELATED	coord: 3..234

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G014130.1	Lsi01G014130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0022857	transmembrane transporter activity