Lsi01G013840 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi01G013840
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionFlagellin N-methylase
Locationchr01: 11982296 .. 11989222 (-)
RNA-Seq ExpressionLsi01G013840
SyntenyLsi01G013840
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAGTGATATAGCTGATTTACGAATAGAAATTGTTGAAGTCGGGTCTGCTGCTCATTTTTTTTTTTGATGTTTTTTCTTTTTTTCTTTTTCTTTTTTTTTTGCCCTCATTTCAACTCGTGTAGAAACTTGAAAGTGTTCTCTGCTTTTTGTTATCCATGTTTATTTTTCATGTCATGCTATTAGTGACTGCCACTTATAGAGTTCGCTCAAACATGAAATGTTGAAAGCCTCTTTATTCTGTTCCTCTGTTATTATCTTGCTCTTCTGATCCTTCTTATTGTTGGAGATCATGAGTTAGCAGGCAATTTGGTTAACTTTGTTGTGAATTCATTGCAAAATGATTATTAAGTTTGTAGTTGCAGGGGAAGTTACAGAGCCAAATGGCCTTTCTGTTGCTTGCTGTAGGAAGTGGCATCTATATTATCCTTAACTCATATCTTTAGCTTTGCTTTTGTTTAACAATCCTATATGTGTGCTTGTTATTTCTAGTTTGGCTTTTCTTCTTTTTCTCCTTTATGGTTTTGTTTGGGAGTAATTTTGAAACTTTCAAACATGGTTTTAATCTTTCAAAATCAATATAATATTGGATTTTACACTTTTGAACATGGATTTCATATCACTTGATTTAAAGCATGTTTCGGAATGATGTAAATATGACAAACAAAATTTAACCATTTCATTCAAAATCACTTTCAAGCATGTCCCAAATCTCTTTCTAGTGCAGAATCTTGTTGGTCTGGACAGTATTCTATTTAGCTCTCCAAAAGAGTTTTTTACATTCTGCAGAGTTCGTTTGATTATATTGGATTTTACACTTTTGAACAGAGATTTCGTATCACTTGATTTAAAGCATGTTTCGGAATGATGTTAAACATGGCAAAGCAGAATTTAACCATTTCATTTAAAATCACTCTCAAACATGTCCCAAACCCCTTTCTAGTGCAGATTCTTGGTGGTCCGGAGAGTATTCTATTTAGCTCTCCAAAGAGTTCTTCACATTATGCAGAGTTCGTTTGATTATATTATGCTTGAGCTGAAAATTGTTCCTGTTTCTTCAGAAAATTGTCGGTGGGGCTATGGAGCTGTTAGCTAGAATAATTTCTGAAACATGTTTGCTGTTAAATTCCTTTCTTGTCTTCCTATGTTTGAGGCCATGTTCAGGTAAGGTAAGAGCAAGCAAGAATTTGATACAGGATGAATTGATGCTTGTTGCTGTGGTCCTTGATAAATTGTCTAAATCTTATTGTGGGTCTCTTTGGATTTGGGTGGGCAAAGTTATTCTTAAGATGTGGAAAAGGGTAAGGGTGGAAAATTTAGGTTGAATTACATATTTAATTATTGTACTATTAGCATCTTGTCTTGTCTATTATTTAGGCTTTGAATTTAACGATTATACCTAGGTATGAACATTGGATTATGCTTTTATTTATCTTCTGTAATTATACAGAAAATTACCCATAGTATCTTGGATTGGTTTGAAACAACATTCCAACTTCTGGGAAAAGCGATTCTCTGGATTTTTCAACTCTAATACAAATTCCTGTTCCATATTTTTCAACAATAGTAGGGGACCAGGTTTTATATATGCTCATAGATAAAGGATGTTTGAGAATAATATGTCTAAGAATAAACTTGATTGGAATCATCTGTTGTGTTTATGGTTGTGTTTGATATTGTAATCAAAATTTTATGGCATAAATGATTTCTATTTTCTCGTGTGTGTAATTCCTTTTCTACGGTGTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTCGAATTTTGAACATAGGTTTCTTGTAACTTCAACTTCAGTAGTGTCTACTATTGAAGTTTGTACATTTATCGAAAAAATTTATCTTTATATATATATATATTTTTTGCACATTTATAGAAGAATTTCATCTTGCAACTTTGGACTTCAAACATAGACTTCCTAACTCCAATATATTAACTTCAGACTTTATAATTCAACTTAACGTCCCAAACATTCCATTAAGGGGGTGTTTGGTGGCCCGTAATGAGATGAGAATGTAATGTACTCCAAAATTCATGTTTGTATTAAGCGTTTTGGGTCCGATTTGTAATACAAAACTCAATTCGTTCCAATAATTTTCAATCTAACCATCTTTTCCATCGTTCTCACGTCTCACAATCTCATTTTCATTTTGTCTTCGATTACCAATAATCTTGATTACGTCTTAACTCTCCCTCTTCTAATTACATCTCGACTCTCCCTCTTAAAAATAATGTCCATTATGAGTCAATCTTTCTTGGATTTTCAAAGTCCACTTCTTCATGGTCAATTCCACCCCCTTTAATTTCTGCCTTTTAACTCTTAAAAGTTCAAGCACATGCAAGCTTCCTTATGAACTAAGATATGGTTGGTAGATCTAGAGTGCTTTACTTTATAGCCTAATCAAACCGTTGAAATAACTTTTGCTCCAATTAACCTTTCTTAAAACAAATCTACTTAGTCAACCCCCCAATAAAAAAATGGTAGCTTTGATCCTATAATTTAAAAGTTGAAAAGTCTATGAAGCTAAAATAATAAATTAAAAATACACTCAAAGAGTTTATGAAGCTAAAATAATAAATGAAGTCTTTCAAGTGCTTGCCAAACTTAAGTGTTATTAATGACAACTCTATTCTCAACTTCAAACTTGCAAATATTGACCTGCAAAACTCCAAAATGATCCTTCTTCACTCAAATCAATTTGTAACACATGAAATATGGATTGAACTGAGTCTATCCAATTTTATAAATGAAAAATGAATGTTTGCTAAATTGCTTTGGATCGCTTAATAAGTCTGATTGAAACATGTGGAATGTCATGATTGGTTGGAGATTAAGCCTTCAACTAGAAAGTAATAAATCTTATATAAGACTAAAATTAACATAATTTTTAAAACGTTAAAAATATAATTTTTAAAAAACAAATAACACATCTATAAAAAGAAAATTATTATAAATAGAAAAAATATCAAATATAGAAAAATGAGTCAAAAAGAAGAATTTTTAAAAATAGAAAAATAAGAGAAATTATTTACACAAAATAGCAAAAGTTGTAGATAATTGTGATAGATGCAGATAGAAGTCTACTAGGATCCATACAAAAATGATAGACATAGAAGTCTATTGATAGATGCAGATAAAAGTCTATTGTCTATCAATATTTTTTTTTTAAATAGTTTGATATTTTATTTTATACGTCAAAATTTTTCATAGCCAAGGGTTGATAATTGTTTAAAAAGGAAAAAACATTTAAAATTTAGGGAGTCCTCTTCAGTCTTTATACAACGCTTATCCAAAACTCCAAAACAATGTACCAGGCGGTGGCTCCGCCGCAAGTCACCGTAAGCGCCACTCGCCGACCGCAGCAGATTCCAACGCAGGATAATAAGGCCACACAAGGCCGGAACATCAATGTCGGGTTTGGAGGAAAACGAAAGGAGCAATTATGGCAGTGCGTCGAGGGCTGCGGCGCTTGCTGCAAGCTCGCCAAGGGGCCGTCCTTCGCCTCGCCGGAGGAAACCTTCCAGAATACTTCCGATATTGAGGTTCATCAATTCATTTCATCATCAGAATTAAGTCTCAGCTGGAATTCCTGTAGCATTGTACTGTGATTTTTCAGTATCGATTGATATGGATTTTACTTAATGAATTTCAGCTCTATAAAAGCTTGATTGGCCCAGATGGATGGTGCATTCACTACGAGAAGAACACGCGTAAATGCTCCATTTATGCCGGTAAGACTGAGCCGTCTGATTACAGTTTCCAATTTTGATTTCTAATGTTGTGGGTTGGGAGTACAACCAAAGCTCTACATTGATTATATCAGGGATATCATAGCCATAGGTATATAAATAAGAATAAATATATCTATTGTATGAGGTGTTTTGGGTGAAACCAAGAGTAAAATTACGAGGTTGTATGTCCAAGGTGGACAATATATAGAGATATTGGGAGTTGTCGTCCCAACAAATTGATATCATAGTTGACTTAGCTATGTCAACAGAAACTCCCCTATCGAGAAAAAAATTCTCCAGTGGAGAACAAAGAAATCAGCGATCTTTAGGAGTTGTTTGGGGATCTGTAATGGAATGAGTTTGGATTATAATGTAATCAAAAACTCATGTTTGGATGGAGCATTTTTTGCCCGATTTATAATATTAAACTCATTATGTTCTGACTGTTTAACCGAACTCTCTTTCCCACCGTTTTTACGTTTCACGATTCCATTTTCGTTCCGCCCTCGATACCTTACGCATTCCAATACTCTTCTGAATCCTGATTACATTCCAGCCTCCCAAAACAGCCCCCTAATGACTATCCTTAATGATATAGTCATAGTAAATCCATGGTTGAGCTTCAGACCGATGGTGTCCTCTGGTGAAGAGTTGACCTAGTTAAAAAGTAATATGCTCAAGTGTAATTTGGAAGGATGACTATTTGAGGGGAGGTTCAAGGTGGTATTTTGTTCGAGGGGAGGATTGTTGGGAATGCTCACATTGACTAGATAAGTGGATGATCATGGGTATATAAGTAAAGACAACCATGTACAATAGTACGAAACTTTTTGCGTAAAAAAGTCACGAAGATATATACCCAAAGTAGATAATATCAAATTATATATGGAGGGTTGTTGTCCCAACATTGTGATGTTTGAAATATGAGGCTTATGTATTCTCCATTAATTTTTACAGATCGCCCTTATTTTTGCTGCGTAGAGTCTCCTGTGTTTGAGAAGTTGTATGGAATCAAAGAAAACAAGTTCAACAAGGCTGCTTGCAGGTCTTTTCTTAAACCTCTGTATCTTCTATTCTGCTTTTTGTTGTTCAAGTTCAAGGGTGGATATATGCTTTAGGTTTTAGATTATTTTTTTAGTACAACAAAGTGGGATGGGAGAATTTAAATTTCCAAGCTCAAAGAAAGGAGTACATACCCATAAACTTTGATTTAGAGATCCAATGAGAATATACATTGAAAATAGGTTTAAATACTAATTTGGTTCTTTTACTTTCGACTTTGGTTCGTTTTAGTTCCTTTACTCTCAAATTATTCATATTGGTTCATATACTTTCTGTTTTTGTTCAATTTGGTACCTGTTCTTTTAAAATATTTATTTTGGATCCTATACTTTTAAGAAATGAACACTTTTGTCCCTATTAGCAAAATGTCAACATAAAATTTAGAAGAAAGAAAAATGAGATGAAAATGAAAATTAAGAGACCAAAATGGTCATTTTTTAAAAATATATGGACTAAAATGTACATTTTGAAAGTATAGAGACTAAATTGAACCAAATGTGAAAGTACCAGAACCAAAGTAATATTTAAACTTTGAAAATAAGTAGAAGAATTAGAATAAAACGAAAGCAAACCTAGAGAATTAAGTGCATATTTGGAGTGATTTTGAAATTATTAGAATCACTTTTGTCGTGATCAAAGATTCAAAATCACTTCGACGCACTTCTCTTTAATGACTCAAAATTCATTTAATGTTTAGTTTTACACTTTTAAATGCAATTTTCATATCATTAAAATTGGTTTAAATGATCAAAACATGGTTCAGAGTGATTTTGAAAATGACAAAAGTGAATTTAACCCTTTCGAAATCACTCCCAAACATGATATAAAAGAAATGAAAAAAAAATCAATTTACACTCCTTATCTCACTATGGTTAGTATCAATTTAAACTTTAAACTTTCACAAGTGAATCATTTTAGACCTTCTGGTAGTAATTTACAACTATTTTACCTTTAAAATCACCTCAAAATCATCTCAATAAAATTATTCTTCTTCCAAAATCTTACCAAAGTAGCAAGAAAAATTCTATTTAGTAGAGAAACATAGAGGGAAAAAATATAAAAAAAACCACTCATATTAATGAAAGTTGCAGCTATCCATTTGGTTCGAGCATTTATCTCTTAGATTTCGTTAATTCATGTATTTAAAGAAGTCTTAAACACATTCATGTATTAGTTGTTTTAAAATGAAATCCAAATCAAGGGTCTATCCTCCTTAATGCTTTTTAGGATACCAAATTCTTGCAAATTCTGTGGTTTGGCTAATTCTTCATCGTTTCTGCAGTAGCTGCAGGGACACTATAAAAGCAGTCTATGGTTTTTCCTCCAAGGAATTAGAAAACTTCAACAAAGCAGTTCAAAGCTCCGAGTCTGTGTAA

mRNA sequence

ATGCAAGGGAAGTTACAGAGCCAAATGGCCTTTCTGTTGCTTGCTGCGGTGGCTCCGCCGCAAGTCACCGTAAGCGCCACTCGCCGACCGCAGCAGATTCCAACGCAGGATAATAAGGCCACACAAGGCCGGAACATCAATGTCGGGTTTGGAGGAAAACGAAAGGAGCAATTATGGCAGTGCGTCGAGGGCTGCGGCGCTTGCTGCAAGCTCGCCAAGGGGCCGTCCTTCGCCTCGCCGGAGGAAACCTTCCAGAATACTTCCGATATTGAGCTCTATAAAAGCTTGATTGGCCCAGATGGATGGTGCATTCACTACGAGAAGAACACGCGTAAATGCTCCATTTATGCCGAGTCTCCTGTGTTTGAGAAGTTGTATGGAATCAAAGAAAACAAGTTCAACAAGGCTGCTTGCAGGGACACTATAAAAGCAGTCTATGGTTTTTCCTCCAAGGAATTAGAAAACTTCAACAAAGCAGTTCAAAGCTCCGAGTCTGTGTAA

Coding sequence (CDS)

ATGCAAGGGAAGTTACAGAGCCAAATGGCCTTTCTGTTGCTTGCTGCGGTGGCTCCGCCGCAAGTCACCGTAAGCGCCACTCGCCGACCGCAGCAGATTCCAACGCAGGATAATAAGGCCACACAAGGCCGGAACATCAATGTCGGGTTTGGAGGAAAACGAAAGGAGCAATTATGGCAGTGCGTCGAGGGCTGCGGCGCTTGCTGCAAGCTCGCCAAGGGGCCGTCCTTCGCCTCGCCGGAGGAAACCTTCCAGAATACTTCCGATATTGAGCTCTATAAAAGCTTGATTGGCCCAGATGGATGGTGCATTCACTACGAGAAGAACACGCGTAAATGCTCCATTTATGCCGAGTCTCCTGTGTTTGAGAAGTTGTATGGAATCAAAGAAAACAAGTTCAACAAGGCTGCTTGCAGGGACACTATAAAAGCAGTCTATGGTTTTTCCTCCAAGGAATTAGAAAACTTCAACAAAGCAGTTCAAAGCTCCGAGTCTGTGTAA

Protein sequence

MQGKLQSQMAFLLLAAVAPPQVTVSATRRPQQIPTQDNKATQGRNINVGFGGKRKEQLWQCVEGCGACCKLAKGPSFASPEETFQNTSDIELYKSLIGPDGWCIHYEKNTRKCSIYAESPVFEKLYGIKENKFNKAACRDTIKAVYGFSSKELENFNKAVQSSESV
Homology
[Close]
BLAST of Lsi01G013840 vs. ExPASy TrEMBL
Match: A0A1S3BH68 (uncharacterized protein LOC103489795 OS=Cucumis melo OX=3656 GN=LOC103489795 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 9.1e-71
Identity = 136/162 (83.95%), Postives = 143/162 (88.27%), Query Frame = 0 

Query: 16  AVAPPQVTVSATRRPQQIPTQDNKATQGRNINVGFGGKRKEQLWQCVEGCGACCKLAKGP 75
           AVAPPQVTV+A R+PQ+I T+D+K TQGRN NVGFGGKRKEQLWQC+EGCGACCKLAKG 
Sbjct: 4   AVAPPQVTVTAARKPQKIATKDSKTTQGRNTNVGFGGKRKEQLWQCIEGCGACCKLAKGT 63

Query: 76  SFASPEETFQNTSDIELYKSLIGPDGWCIHYEKNTRKCSIYA--------ESPVFEKLYG 135
           SFASPEE FQNTSDIELYKSLIG DGWCIHYEK TRKCSIYA        ESPVFEKLYG
Sbjct: 64  SFASPEEIFQNTSDIELYKSLIGVDGWCIHYEKTTRKCSIYADRPYFCRVESPVFEKLYG 123

Query: 136 IKENKFNKAA---CRDTIKAVYGFSSKELENFNKAVQSSESV 167
           IKENKFNKAA   CRDTIKA+YGFSSKELENFNKAVQSSESV
Sbjct: 124 IKENKFNKAACSSCRDTIKAIYGFSSKELENFNKAVQSSESV 165

[Close]
BLAST of Lsi01G013840 vs. ExPASy TrEMBL
Match: A0A5A7TWI1 (Flagellin N-methylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001450 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 9.1e-71
Identity = 136/162 (83.95%), Postives = 143/162 (88.27%), Query Frame = 0 

Query: 16  AVAPPQVTVSATRRPQQIPTQDNKATQGRNINVGFGGKRKEQLWQCVEGCGACCKLAKGP 75
           AVAPPQVTV+A R+PQ+I T+D+K TQGRN NVGFGGKRKEQLWQC+EGCGACCKLAKG 
Sbjct: 4   AVAPPQVTVTAARKPQKIATKDSKTTQGRNTNVGFGGKRKEQLWQCIEGCGACCKLAKGT 63

Query: 76  SFASPEETFQNTSDIELYKSLIGPDGWCIHYEKNTRKCSIYA--------ESPVFEKLYG 135
           SFASPEE FQNTSDIELYKSLIG DGWCIHYEK TRKCSIYA        ESPVFEKLYG
Sbjct: 64  SFASPEEIFQNTSDIELYKSLIGVDGWCIHYEKTTRKCSIYADRPYFCRVESPVFEKLYG 123

Query: 136 IKENKFNKAA---CRDTIKAVYGFSSKELENFNKAVQSSESV 167
           IKENKFNKAA   CRDTIKA+YGFSSKELENFNKAVQSSESV
Sbjct: 124 IKENKFNKAACSSCRDTIKAIYGFSSKELENFNKAVQSSESV 165

[Close]
BLAST of Lsi01G013840 vs. ExPASy TrEMBL
Match: A0A0A0KX40 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293150 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 7.2e-68
Identity = 130/159 (81.76%), Postives = 138/159 (86.79%), Query Frame = 0 

Query: 16  AVAPPQVTVSATRRPQQIPTQDNKATQGRNINVGFGGKRKEQLWQCVEGCGACCKLAKGP 75
           AVAPP+VTV+A  RP +  T+D K TQGRNINVGFGGKRKE+LWQC+EGCGACCKLAKGP
Sbjct: 4   AVAPPRVTVTAAHRPHKTKTKDYKTTQGRNINVGFGGKRKEELWQCIEGCGACCKLAKGP 63

Query: 76  SFASPEETFQNTSDIELYKSLIGPDGWCIHYEKNTRKCSIYA--------ESPVFEKLYG 135
           SFA+PEE FQNTSDIELYKSLIG DGWCIHYEK TRKCSIYA        ESPVFEKLYG
Sbjct: 64  SFAAPEEIFQNTSDIELYKSLIGVDGWCIHYEKTTRKCSIYADRPYFCRVESPVFEKLYG 123

Query: 136 IKENKFNKAA---CRDTIKAVYGFSSKELENFNKAVQSS 164
           IKENKFNKAA   CRDTIKA+YGFSSKELENFNKAVQSS
Sbjct: 124 IKENKFNKAACSSCRDTIKAIYGFSSKELENFNKAVQSS 162

[Close]
BLAST of Lsi01G013840 vs. ExPASy TrEMBL
Match: A0A6J1CPU4 (uncharacterized protein LOC111013629 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013629 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 2.1e-67
Identity = 129/157 (82.17%), Postives = 138/157 (87.90%), Query Frame = 0 

Query: 16  AVAPPQVTVSATRRPQQIPTQDNKATQGRNINVGFGGKRKEQLWQCVEGCGACCKLAKGP 75
           AVAPP+VTV+A RRPQQI T+DNK  +GR+INVGFGGKRKEQLWQCVEGCGACCKLA GP
Sbjct: 25  AVAPPRVTVTAARRPQQIATKDNKTAKGRSINVGFGGKRKEQLWQCVEGCGACCKLAMGP 84

Query: 76  SFASPEETFQNTSDIELYKSLIGPDGWCIHYEKNTRKCSIYA--------ESPVFEKLYG 135
           SFA+PEE F+N+SDIELYKSLIG DGWCIHYEK+TRKCSIYA        ESPVFEKLYG
Sbjct: 85  SFATPEEIFENSSDIELYKSLIGADGWCIHYEKSTRKCSIYADRPYFCRVESPVFEKLYG 144

Query: 136 IKENKFNKAA--CRDTIKAVYGFSSKELENFNKAVQS 163
           IKENKFNK A  CRDTIKAVYGF SKELENFNKAVQS
Sbjct: 145 IKENKFNKTACSCRDTIKAVYGFPSKELENFNKAVQS 181

[Close]
BLAST of Lsi01G013840 vs. ExPASy TrEMBL
Match: A0A6J1CQF1 (uncharacterized protein LOC111013629 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013629 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.7e-67
Identity = 129/158 (81.65%), Postives = 138/158 (87.34%), Query Frame = 0 

Query: 16  AVAPPQVTVSATRRPQQIPTQDNKATQGRNINVGFGGKRKEQLWQCVEGCGACCKLAKGP 75
           AVAPP+VTV+A RRPQQI T+DNK  +GR+INVGFGGKRKEQLWQCVEGCGACCKLA GP
Sbjct: 25  AVAPPRVTVTAARRPQQIATKDNKTAKGRSINVGFGGKRKEQLWQCVEGCGACCKLAMGP 84

Query: 76  SFASPEETFQNTSDIELYKSLIGPDGWCIHYEKNTRKCSIYA--------ESPVFEKLYG 135
           SFA+PEE F+N+SDIELYKSLIG DGWCIHYEK+TRKCSIYA        ESPVFEKLYG
Sbjct: 85  SFATPEEIFENSSDIELYKSLIGADGWCIHYEKSTRKCSIYADRPYFCRVESPVFEKLYG 144

Query: 136 IKENKFNKAA---CRDTIKAVYGFSSKELENFNKAVQS 163
           IKENKFNK A   CRDTIKAVYGF SKELENFNKAVQS
Sbjct: 145 IKENKFNKTACSSCRDTIKAVYGFPSKELENFNKAVQS 182

[Close]
BLAST of Lsi01G013840 vs. NCBI nr
Match: XP_038883478.1 (uncharacterized protein LOC120074431 [Benincasa hispida])

HSP 1 Score: 280.8 bits (717), Expect = 7.6e-72
Identity = 138/162 (85.19%), Postives = 145/162 (89.51%), Query Frame = 0 

Query: 16  AVAPPQVTVSATRRPQQIPTQDNKATQGRNINVGFGGKRKEQLWQCVEGCGACCKLAKGP 75
           AVAPPQV+++A RRPQQI T+D KATQGRNINVGFG KRKEQLWQCVEGCGACCKLAKGP
Sbjct: 4   AVAPPQVSITAARRPQQITTKDKKATQGRNINVGFGQKRKEQLWQCVEGCGACCKLAKGP 63

Query: 76  SFASPEETFQNTSDIELYKSLIGPDGWCIHYEKNTRKCSIYA--------ESPVFEKLYG 135
           SFASPEE FQNTSDIELYKSLIG DGWCIHYEK+TRKCSIYA        ESPVFEKLYG
Sbjct: 64  SFASPEEIFQNTSDIELYKSLIGADGWCIHYEKSTRKCSIYADRPYFCRVESPVFEKLYG 123

Query: 136 IKENKFNKAA---CRDTIKAVYGFSSKELENFNKAVQSSESV 167
           IKENKFNKAA   CRDTIKA+YGFSSKELENFNKAVQSSES+
Sbjct: 124 IKENKFNKAACSSCRDTIKAIYGFSSKELENFNKAVQSSESI 165

[Close]
BLAST of Lsi01G013840 vs. NCBI nr
Match: XP_008447323.1 (PREDICTED: uncharacterized protein LOC103489795 [Cucumis melo] >XP_008447330.1 PREDICTED: uncharacterized protein LOC103489795 [Cucumis melo] >KAA0047324.1 flagellin N-methylase [Cucumis melo var. makuwa])

HSP 1 Score: 276.2 bits (705), Expect = 1.9e-70
Identity = 136/162 (83.95%), Postives = 143/162 (88.27%), Query Frame = 0 

Query: 16  AVAPPQVTVSATRRPQQIPTQDNKATQGRNINVGFGGKRKEQLWQCVEGCGACCKLAKGP 75
           AVAPPQVTV+A R+PQ+I T+D+K TQGRN NVGFGGKRKEQLWQC+EGCGACCKLAKG 
Sbjct: 4   AVAPPQVTVTAARKPQKIATKDSKTTQGRNTNVGFGGKRKEQLWQCIEGCGACCKLAKGT 63

Query: 76  SFASPEETFQNTSDIELYKSLIGPDGWCIHYEKNTRKCSIYA--------ESPVFEKLYG 135
           SFASPEE FQNTSDIELYKSLIG DGWCIHYEK TRKCSIYA        ESPVFEKLYG
Sbjct: 64  SFASPEEIFQNTSDIELYKSLIGVDGWCIHYEKTTRKCSIYADRPYFCRVESPVFEKLYG 123

Query: 136 IKENKFNKAA---CRDTIKAVYGFSSKELENFNKAVQSSESV 167
           IKENKFNKAA   CRDTIKA+YGFSSKELENFNKAVQSSESV
Sbjct: 124 IKENKFNKAACSSCRDTIKAIYGFSSKELENFNKAVQSSESV 165

[Close]
BLAST of Lsi01G013840 vs. NCBI nr
Match: XP_004142095.1 (uncharacterized protein LOC101220204 [Cucumis sativus] >XP_011653609.1 uncharacterized protein LOC101220204 [Cucumis sativus] >KGN54205.1 hypothetical protein Csa_017981 [Cucumis sativus])

HSP 1 Score: 266.5 bits (680), Expect = 1.5e-67
Identity = 130/159 (81.76%), Postives = 138/159 (86.79%), Query Frame = 0 

Query: 16  AVAPPQVTVSATRRPQQIPTQDNKATQGRNINVGFGGKRKEQLWQCVEGCGACCKLAKGP 75
           AVAPP+VTV+A  RP +  T+D K TQGRNINVGFGGKRKE+LWQC+EGCGACCKLAKGP
Sbjct: 4   AVAPPRVTVTAAHRPHKTKTKDYKTTQGRNINVGFGGKRKEELWQCIEGCGACCKLAKGP 63

Query: 76  SFASPEETFQNTSDIELYKSLIGPDGWCIHYEKNTRKCSIYA--------ESPVFEKLYG 135
           SFA+PEE FQNTSDIELYKSLIG DGWCIHYEK TRKCSIYA        ESPVFEKLYG
Sbjct: 64  SFAAPEEIFQNTSDIELYKSLIGVDGWCIHYEKTTRKCSIYADRPYFCRVESPVFEKLYG 123

Query: 136 IKENKFNKAA---CRDTIKAVYGFSSKELENFNKAVQSS 164
           IKENKFNKAA   CRDTIKA+YGFSSKELENFNKAVQSS
Sbjct: 124 IKENKFNKAACSSCRDTIKAIYGFSSKELENFNKAVQSS 162

[Close]
BLAST of Lsi01G013840 vs. NCBI nr
Match: XP_022143805.1 (uncharacterized protein LOC111013629 isoform X2 [Momordica charantia])

HSP 1 Score: 265.0 bits (676), Expect = 4.3e-67
Identity = 129/157 (82.17%), Postives = 138/157 (87.90%), Query Frame = 0 

Query: 16  AVAPPQVTVSATRRPQQIPTQDNKATQGRNINVGFGGKRKEQLWQCVEGCGACCKLAKGP 75
           AVAPP+VTV+A RRPQQI T+DNK  +GR+INVGFGGKRKEQLWQCVEGCGACCKLA GP
Sbjct: 25  AVAPPRVTVTAARRPQQIATKDNKTAKGRSINVGFGGKRKEQLWQCVEGCGACCKLAMGP 84

Query: 76  SFASPEETFQNTSDIELYKSLIGPDGWCIHYEKNTRKCSIYA--------ESPVFEKLYG 135
           SFA+PEE F+N+SDIELYKSLIG DGWCIHYEK+TRKCSIYA        ESPVFEKLYG
Sbjct: 85  SFATPEEIFENSSDIELYKSLIGADGWCIHYEKSTRKCSIYADRPYFCRVESPVFEKLYG 144

Query: 136 IKENKFNKAA--CRDTIKAVYGFSSKELENFNKAVQS 163
           IKENKFNK A  CRDTIKAVYGF SKELENFNKAVQS
Sbjct: 145 IKENKFNKTACSCRDTIKAVYGFPSKELENFNKAVQS 181

[Close]
BLAST of Lsi01G013840 vs. NCBI nr
Match: XP_022143803.1 (uncharacterized protein LOC111013629 isoform X1 [Momordica charantia] >XP_022143804.1 uncharacterized protein LOC111013629 isoform X1 [Momordica charantia])

HSP 1 Score: 264.6 bits (675), Expect = 5.7e-67
Identity = 129/158 (81.65%), Postives = 138/158 (87.34%), Query Frame = 0 

Query: 16  AVAPPQVTVSATRRPQQIPTQDNKATQGRNINVGFGGKRKEQLWQCVEGCGACCKLAKGP 75
           AVAPP+VTV+A RRPQQI T+DNK  +GR+INVGFGGKRKEQLWQCVEGCGACCKLA GP
Sbjct: 25  AVAPPRVTVTAARRPQQIATKDNKTAKGRSINVGFGGKRKEQLWQCVEGCGACCKLAMGP 84

Query: 76  SFASPEETFQNTSDIELYKSLIGPDGWCIHYEKNTRKCSIYA--------ESPVFEKLYG 135
           SFA+PEE F+N+SDIELYKSLIG DGWCIHYEK+TRKCSIYA        ESPVFEKLYG
Sbjct: 85  SFATPEEIFENSSDIELYKSLIGADGWCIHYEKSTRKCSIYADRPYFCRVESPVFEKLYG 144

Query: 136 IKENKFNKAA---CRDTIKAVYGFSSKELENFNKAVQS 163
           IKENKFNK A   CRDTIKAVYGF SKELENFNKAVQS
Sbjct: 145 IKENKFNKTACSSCRDTIKAVYGFPSKELENFNKAVQS 182

[Close]
BLAST of Lsi01G013840 vs. TAIR 10
Match: AT5G02710.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0153 (InterPro:IPR005358); Has 240 Blast hits to 240 proteins in 73 species: Archae - 10; Bacteria - 110; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). )

HSP 1 Score: 162.5 bits (410), Expect = 2.8e-40
Identity = 85/170 (50.00%), Postives = 109/170 (64.12%), Query Frame = 0 

Query: 12  LLLAAVAPPQVTVSATRRPQQIPTQDNKATQGRN----INVGF-GGKRKEQLWQCVEGCG 71
           L L+     +  +SATRR Q    +  K             GF GG  KE  W+CVEGCG
Sbjct: 5   LALSTAPMSRTIISATRRSQVSQPKAKKVKPANKRPTMSTSGFSGGTTKELTWKCVEGCG 64

Query: 72  ACCKLAKGPSFASPEETFQNTSDIELYKSLIGPDGWCIHYEKNTRKCSIYAESP------ 131
           ACCK+AK  SFA+P+E F N  D+ELY+S+IG DGWC++Y+K TRKCSIYA+ P      
Sbjct: 65  ACCKIAKDFSFATPDEIFDNPDDVELYRSMIGDDGWCLNYDKATRKCSIYADRPYFCRVE 124

Query: 132 --VFEKLYGIKENKFNKAA---CRDTIKAVYGFSSKELENFNKAVQSSES 166
             VF+ LYGI+E KFNK A   C DTIK +YG  SKEL++FN+A++S+ S
Sbjct: 125 PEVFKSLYGIEEKKFNKEAVSCCIDTIKTIYGPDSKELDSFNRAIRSNPS 174

The following BLAST results are available for this feature:
BLAST of Lsi01G013840 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi01G013840 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BH689.1e-7183.95uncharacterized protein LOC103489795 OS=Cucumis melo OX=3656 GN=LOC103489795 PE=... [more]
A0A5A7TWI19.1e-7183.95Flagellin N-methylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold90... [more]
A0A0A0KX407.2e-6881.76Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293150 PE=4 SV=1[more]
A0A6J1CPU42.1e-6782.17uncharacterized protein LOC111013629 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A6J1CQF12.7e-6781.65uncharacterized protein LOC111013629 isoform X1 OS=Momordica charantia OX=3673 G... [more]
BLAST of Lsi01G013840 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038883478.17.6e-7285.19uncharacterized protein LOC120074431 [Benincasa hispida][more]
XP_008447323.11.9e-7083.95PREDICTED: uncharacterized protein LOC103489795 [Cucumis melo] >XP_008447330.1 P... [more]
XP_004142095.11.5e-6781.76uncharacterized protein LOC101220204 [Cucumis sativus] >XP_011653609.1 uncharact... [more]
XP_022143805.14.3e-6782.17uncharacterized protein LOC111013629 isoform X2 [Momordica charantia][more]
XP_022143803.15.7e-6781.65uncharacterized protein LOC111013629 isoform X1 [Momordica charantia] >XP_022143... [more]
BLAST of Lsi01G013840 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G02710.12.8e-4050.00unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXP... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005358Putative zinc- or iron-chelating domain containing proteinPFAMPF03692CxxCxxCCcoord: 60..132
e-value: 3.5E-7
score: 30.8
NoneNo IPR availablePANTHERPTHR36791OS03G0363400 PROTEINcoord: 16..164

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G013840.1Lsi01G013840.1mRNA