Lsi01G013730 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi01G013730
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr01: 11924898 .. 11925666 (+)
RNA-Seq ExpressionLsi01G013730
SyntenyLsi01G013730
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCGAAGAGAAAAAACTGAAAATTCGGCCATTACCCCCTTTCTTCAACATCTGGCCTCCTTGTTTCCGAGGTTGGTCAACCAACTTCGTCACTGCAACTGTACTCGCAAACAACAGAGGAAGCAAAATTAAGCGATTCTTGGATTGAAGATTAAGTTAAGCTCTGAGATTTTCCGTTTCCTGAGACCCTTTTTTCCCCACCTCCAGCCTCCAGATCGATCTGGAAGTTCTGATGGTGATGTTCTTCATATGTGTTTCTGTTTCTGATACTACTGTTGTTTTAATTCGTAGCTAGTCGTTCTTTTGGTGATTCATACTCATTGTTTTATTTGCCTTTTCTTTCTTTCTCTCTCTCTTTTTTTTCAGTAATAATCAATAAAGATTCTACATCAAGTTTGGATATGAGAAGTCTCTGTTTTATAGATTAGTTCGTCGATCTTTCTAGGTAATTTGTGGATCGGTTTCTTGAGGTCAATGTCAGGAGATTCTCGGTTTGCTACACTTTAGGGTTTGATAATTTTTTTTCCTTTTTTAAAAAAATTTGCCGGGTTCAGTTACGTTATTCACTTTCTTGCTGCTGCTGGGAATAGGATTAATTGCTTAACGTCTGTTAACATTTGTTTTTGCAGTTCGTGTTATTCTTGTTTTTCACGTATAATGGTTAGGCTTTTAAGGTGCGGTGGTTTTTCCAGGGAGCAGGCTACCATTGGATTTTGAGGCTTCTTGTTGGATTTAGAATACGCACTGAATCCGTCTCCAATCACCCACCA

mRNA sequence

TCCGAAGAGAAAAAACTGAAAATTCGGCCATTACCCCCTTTCTTCAACATCTGGCCTCCTTGTTTCCGAGGTTGGTCAACCAACTTCGTCACTGCAACTATTAAGTTAAGCTCTGAGATTTTCCGTTTCCTGAGACCCTTTTTTCCCCACCTCCAGCCTCCAGATCGATCTGGAAGTTCTGATGGTGATGCTTTTAAGGTGCGGTGGTTTTTCCAGGGAGCAGGCTACCATTGGATTTTGAGGCTTCTTGTTGGATTTAGAATACGCACTGAATCCGTCTCCAATCACCCACCA

Coding sequence (CDS)

TCCGAAGAGAAAAAACTGAAAATTCGGCCATTACCCCCTTTCTTCAACATCTGGCCTCCTTGTTTCCGAGGTTGGTCAACCAACTTCGTCACTGCAACTATTAAGTTAAGCTCTGAGATTTTCCGTTTCCTGAGACCCTTTTTTCCCCACCTCCAGCCTCCAGATCGATCTGGAAGTTCTGATGGTGATGCTTTTAAGGTGCGGTGGTTTTTCCAGGGAGCAGGCTACCATTGGATTTTGAGGCTTCTTGTTGGATTTAGAATACGCACTGAATCCGTCTCCAATCACCCACCA

Protein sequence

SEEKKLKIRPLPPFFNIWPPCFRGWSTNFVTATIKLSSEIFRFLRPFFPHLQPPDRSGSSDGDAFKVRWFFQGAGYHWILRLLVGFRIRTESVSNHPP
Homology
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BLAST of Lsi01G013730 vs. ExPASy TrEMBL
Match: A0A0A0KZE3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293040 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 6.7e-05
Identity = 27/36 (75.00%), Postives = 27/36 (75.00%), Query Frame = 0 

Query: 34 IKLSSEIFRFLR-PFFPHLQPPDRSGSSDGDAFKVR 69
          IKLS EI RF R PF PHLQPPDRSGSSDGD    R
Sbjct: 57 IKLSFEILRFFRPPFSPHLQPPDRSGSSDGDVLHTR 92

The following BLAST results are available for this feature:
BLAST of Lsi01G013730 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi01G013730 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZE36.7e-0575.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293040 PE=4 SV=1[more]
BLAST of Lsi01G013730 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of Lsi01G013730 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G013730.1Lsi01G013730.1mRNA