Lsi01G013650 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G013650
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	floral homeotic protein APETALA 2-like isoform X1
Location	chr01: 11841693 .. 11847210 (-)
RNA-Seq Expression	Lsi01G013650
Synteny	Lsi01G013650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCTGTTGAATCTGTTTGGGAAAAATGGTAACCCACCCCCAAATCTTCTGGTTTTGATTTTAGGGCTTATGATCGAGCTGCAATAAAGTTTCGAGGGGTTCATGCTGATATAAATTTCAATATCAGCGACTACAATGAAGAGATTAAACAGGTGAAGATATGGTTGAGATTGATTTTAGTTTTATGTTGTTTCTTCTGTGTGTGTTGTGAAGTTTGATTGTGAAGCTCTGTTTTGGGGCTTCAATGGCGGATTTGCAGATGAGTAATTTTAGTAAAGAGGAGTTTGTGCATATTCTTCGAAGGCAGAGCACAGGATTTTCAAGAGGGAGTTCTAAATACAGAGGGGTTACTCTGCACAAGTGTGGGAGATGGGAGGCTCGTATGGGGCAGTTCTTGGGGAAGAAGTAAGTAGAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACAGCCATTTTTGCTATTTACTTTTTGTTTGTTTGTATTTTTTACTGTTTCTTTGGTGTCTGATAAACCCACTTGAGTTATTTTTCACTGTGAAAAGGTTAAGAAAAGTTTGGAGCTCTGTTGAAAGATAACTTTATGCCTTTTCTTTTAATAACAAAGTTCAGTACAATACAAATAAGTCCTCGGAAATGTCATTTTCTAAACTTATGGATTTTAATTATATAAAAACATTAATGTTCACAAACTATTCCAAACAAAAACTACCAATTGAGGACGACTTAATGATAATTGACATATACTCATTTTCTTGAGATTAGACTTCACATGTTCTTACTCTACTTGTTATACAATAGGTATCATGATATATACTTTAATGAGAAATTTCGAAAAATAGAAAAATAAGGGAAACTATTTACACAAAATAGCAAAATTTTTAAATAGTTGTGATAGACGTTGATAGAAGTCTATCAGGGTCTATCAGTGATAGAAATGGTAGAAGTCTATCACTGATAAAAGTTTATCAATGTCTATCAGTATTTTTTTTTGCTATTTTCTATAAATAGTTTGACATTTTTTCTACCTGTGAAAATTTTCCTATTTGAATCAGTATGCATTCTTTGATGTAATAATCTAAAATGAAAAAACGAAAAACAAAGATATTCTAGCTTGTCAACATGAACATAACTTAACTGTCATGAACTTGTACTATCAAATTCGAGGTCTGAGGTTTGATCTTCCACCCCATATATTGTTTTTTTTAAAAAAAAAAACCCTAATTTTGATCAATAGTTTAATTTCTAAAATAAGAAGTCATTGGGTTGGTATGTAATGTTGATATTTTGGGGGGGGTTTCTGCAGGTATGTGTATCTTGGGCTGTTTGATAGTGAGATAGAGGCTGCAAGGTCAGAAAATACAGTTTATGTTTAAGCTCAATAAATATAATTATTTCATTATATTTTCCATGAATTTTTTTAATCATAAGATAATATGTTTTTGGTTTGACATCACATTTTGCTGTAATTTAGAGCATATGATAAGGCTGCCATAAAATATAATGGAAGGGAAGCTGTTACCAATTTTGATCAGAGTTCCTATGAGATGGAAATTACTTTTGAATCTGAAAACCAAGGTACTCAACTAGTTCACTTTTTCCATACTATTTTTTTTTTCTTTTTAAATCAATTTATACACCTAAACTCTAAATTTTTTAAAATAATAAATAGAATTGTATTACTTAAAACCTATTAAACTATTAAGTATATTAAATAAAACTCTATTTTTTTAAGTTAATCAATTTAGACTCACAGTTTCATTTGAGACTGTTAATAAAGTTCACATATATAAGATTGATTTAAATTTAAGAATTAGTATGAGAAATGTTGGAATCAAACAAATAGTAGCATGTTTTTATAAATATGAGTGATTTTTCTATCTCTTCTCGGTCTTCCTCTATTTTCTTGACTTATTTAGCAAGAATTATCTCGATATATATATATATATTTTTTTTACTACTTTGGTGGGATATTATGATAATCATAATTTATGTAAGTTAGAATTTAAATGGAGTGAAGTGAAAATAAAAAATTAAGGGCCACGTGAAGCGTTGAGTTGGTCATTATAGTCATTAGATTATAATAATCTGCGTTTGGAACGCATATTAGTTTTGTCTAGGAGTTCGTGTTTGTGGTGTAAACTATTTTAGTCTTGGTAGAAAATAATAAATACGGTAGTTGTAGGTTAATAGTTGTAAACACCACTATTATATTTGGAGTCCTAAATAACTCCAACTTTTAGTTGAGGGCACAAACAGCTTAAATTAATATAATTATTTTAATTGAGTAAAATTTTATACCATTTGTTTTTTTAATTATCATAAAAAGCCTACACACCCCAAAAGACAAATAATAGAACAAACAGTACTTTCGCTGTACTTTTTCATTTGTTCTGTTTGATGCATTACATAATTACTGTTCATAATGTAATCATTAATAAAAGAAAAATATAAACTCTCTCTCTAAAATTGATTTTTTTTTTTTTGTTTTTTTTTTTTTGGGTTGGATAAAAAAGAGATAAGTGATATTGACTTGAACTTGGGTATTGCCCCTCCTTGTCCATCTGAAGACCAAAAAGACAACCTTAATGGCTGTGCTCCAAATTTCTGTAGCTTAAATAAATCAGATTCTGAGAGATCTGAGTTGATAATGGTGAGGCCATTTTCTGACATTGTTTATTCTTATTTCTGATTTCATTATCATTACTTTTTCAAATAATGTGTCTTTTGAGAAGTTTCTATGTTATTTCACCCATTATTTGGCTGGTTTTGATTTTTGAAGCTGTTTCTTTATGTTGCAGCTTCAAAACCATTCTTCTGTGGCTGTGAAAGCACAACCTTCTTTTATGACTTGTCCCAATTTCTTTCCTACCTACCAGGTATTTAAGTCTAAGACTGTTTTCCCATAATTTCTATGTTATTATTAATACATGGCTATAACAAAAAAAACTTCCTGAAGTTTGAAGTGTTTGCTAACAAAAAAAAAACTTTTGCATACTCAATCCTCCTAAAGAAAAAGGTCTTCGACCTAAGAATAGTGGACTTAAAGATACGAGTTTGAGGGCGGATGTTGAGGATCCCCACCCTAGAAAGATGGCGCGGGACTTCTCAAATCCTTTTAAACATATATGGGTTATTTCTTTTCTTGTCAATTAATTTTGAGATGAAACTAATATTTAATTATTTCATAATTGTTGGATTTGAAAATACCCATTTACCCTAAAAATAAGGGAAATTTTTAAAAATAGAAAAATAAGGAAAACTATTTACACAAATAGCAAAATTTTTAGATAGTTGTGATAGACGCTGATAGAAGTCTATCACGGTCTATCAGTGATAGATGCTGATAGAAGTTTATAAATGTCTATCAGTATTCTTTTCACTATTTCCTGTAAATAACTGACATTTTTTTTATCTATGAAATTTTTTCCAAAAATAACTAACATTTGTAGAATTATTTTTGGTTGTTGTACAACTAAAGAAATTGTAAGTAAGGCCACTTTTTATTAACAATGGCCTTTTTTTAATTAAAAAAAGTGTTTAAATTAAAATGTATACTAAACTCGCCTTTTTGAGTCTCTAGGCAAGGTGGAAAAAAAAAAAAAAGCAATGTCTACCATTTAAAAAAAAAAAATTCAAATTTGGTCCCTCTAATTTAGAGAAAGCTAGAATTTAATTCCTATGATTTATAATTAGAATTTAGTCTCTATAATTTATTAAAAATCTTTATAAATAGTTTCTACCGTAGGGACTATTTTTTTTAAGATTTTATCAAACCATAGGAACTATTTATGAGATTTTATCAAATTATAGGGATTAAATTCTAACTTCTAAAACTACAGGGGTAAACTCTTAACTCTTTCTAAACCATAGGAACCAAATTTGTAATTTAACCTTTTTATTTTTAGTTCTATATTTTTCAACAGTGAGATATTTTTTTTTCTTTTAGAAAATCTATATTTAGTTTTAAAACTTGGCTAACATCTTGATTAAAATGCTTAGGCCAGATTTTTTAAAACCAGGCTGGTTTGGGTGTTGAGAAAAAATATTTTCCAAGTTTTCTTTTTTTAAATAAAAATCTATAAAAAAAAGAAGGAAAAAAAAAAGTTATTTTTCAAATATAGAAAAATTAATCAAACTATTTCAACAAATCTTTTATTAAATAGTTTTGATGTTTTTTCTATTTATAATAATTTTTAGAAAAAAACATGGTTTTTATTGTTATATTTTGTTCTTCGTGTGTAATCTTTATCATTAATTATATCAGGGAAGAGCAATGGAGAAGATAATGGAAGTTGAATCTTTACCGAACTGGGGCTGGCGGCAGATCCCAATCCCCCACGGCAGAGCAACTTCAGTCCCTTTCTTCTCCACTGCAGCATCATCAGGATTCCCTTCTTCTCCGGCTGCACTTCCTCCCCATCTTCTCCCACCGCCGCCGTTCCTCCGCTACTACTTTCTGCCCTCTATTCCGGCCACTAACAGCGTTCCTCATTTCTACTGCAGCACCTAA

mRNA sequence

ATGTCTCTGGCTTATGATCGAGCTGCAATAAAGTTTCGAGGGGTTCATGCTGATATAAATTTCAATATCAGCGACTACAATGAAGAGATTAAACAGCTCTGTTTTGGGGCTTCAATGGCGGATTTGCAGATGAGTAATTTTAGTAAAGAGGAGTTTGTGCATATTCTTCGAAGGCAGAGCACAGGATTTTCAAGAGGGAGTTCTAAATACAGAGGGGTTACTCTGCACAAGTGTGGGAGATGGGAGGCTCGTATGGGGCAGTTCTTGGGGAAGAAGTATGTGTATCTTGGGCTGTTTGATAGTGAGATAGAGGCTGCAAGAGCATATGATAAGGCTGCCATAAAATATAATGGAAGGGAAGCTGTTACCAATTTTGATCAGAGTTCCTATGAGATGGAAATTACTTTTGAATCTGAAAACCAAGAGATAAGTGATATTGACTTGAACTTGGGTATTGCCCCTCCTTGTCCATCTGAAGACCAAAAAGACAACCTTAATGGCTGTGCTCCAAATTTCTGTAGCTTAAATAAATCAGATTCTGAGAGATCTGAGTTGATAATGCTTCAAAACCATTCTTCTGTGGCTGTGAAAGCACAACCTTCTTTTATGACTTGTCCCAATTTCTTTCCTACCTACCAGGGAAGAGCAATGGAGAAGATAATGGAAGTTGAATCTTTACCGAACTGGGGCTGGCGGCAGATCCCAATCCCCCACGGCAGAGCAACTTCAGTCCCTTTCTTCTCCACTGCAGCATCATCAGGATTCCCTTCTTCTCCGGCTGCACTTCCTCCCCATCTTCTCCCACCGCCGCCGTTCCTCCGCTACTACTTTCTGCCCTCTATTCCGGCCACTAACAGCGTTCCTCATTTCTACTGCAGCACCTAA

Coding sequence (CDS)

ATGTCTCTGGCTTATGATCGAGCTGCAATAAAGTTTCGAGGGGTTCATGCTGATATAAATTTCAATATCAGCGACTACAATGAAGAGATTAAACAGCTCTGTTTTGGGGCTTCAATGGCGGATTTGCAGATGAGTAATTTTAGTAAAGAGGAGTTTGTGCATATTCTTCGAAGGCAGAGCACAGGATTTTCAAGAGGGAGTTCTAAATACAGAGGGGTTACTCTGCACAAGTGTGGGAGATGGGAGGCTCGTATGGGGCAGTTCTTGGGGAAGAAGTATGTGTATCTTGGGCTGTTTGATAGTGAGATAGAGGCTGCAAGAGCATATGATAAGGCTGCCATAAAATATAATGGAAGGGAAGCTGTTACCAATTTTGATCAGAGTTCCTATGAGATGGAAATTACTTTTGAATCTGAAAACCAAGAGATAAGTGATATTGACTTGAACTTGGGTATTGCCCCTCCTTGTCCATCTGAAGACCAAAAAGACAACCTTAATGGCTGTGCTCCAAATTTCTGTAGCTTAAATAAATCAGATTCTGAGAGATCTGAGTTGATAATGCTTCAAAACCATTCTTCTGTGGCTGTGAAAGCACAACCTTCTTTTATGACTTGTCCCAATTTCTTTCCTACCTACCAGGGAAGAGCAATGGAGAAGATAATGGAAGTTGAATCTTTACCGAACTGGGGCTGGCGGCAGATCCCAATCCCCCACGGCAGAGCAACTTCAGTCCCTTTCTTCTCCACTGCAGCATCATCAGGATTCCCTTCTTCTCCGGCTGCACTTCCTCCCCATCTTCTCCCACCGCCGCCGTTCCTCCGCTACTACTTTCTGCCCTCTATTCCGGCCACTAACAGCGTTCCTCATTTCTACTGCAGCACCTAA

Protein sequence

MSLAYDRAAIKFRGVHADINFNISDYNEEIKQLCFGASMADLQMSNFSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGREAVTNFDQSSYEMEITFESENQEISDIDLNLGIAPPCPSEDQKDNLNGCAPNFCSLNKSDSERSELIMLQNHSSVAVKAQPSFMTCPNFFPTYQGRAMEKIMEVESLPNWGWRQIPIPHGRATSVPFFSTAASSGFPSSPAALPPHLLPPPPFLRYYFLPSIPATNSVPHFYCST

Homology

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BLAST of Lsi01G013650 vs. ExPASy Swiss-Prot
Match: B8AXC3 (APETALA2-like protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=AP2-1 PE=2 SV=2)

HSP 1 Score: 235.7 bits (600), Expect = 6.6e-61
Identity = 137/277 (49.46%), Postives = 175/277 (63.18%), Query Frame = 0


Query: 4   AYDRAAIKFRGVHADINFNISDYNEEIKQLCFGASMADLQMSNFSKEEFVHILRRQSTGF 63
           AYDRAAIKFRGV ADINFN+SDY E+++           QM + SKEEFVH+LRRQSTGF
Sbjct: 209 AYDRAAIKFRGVEADINFNLSDYEEDMR-----------QMKSLSKEEFVHVLRRQSTGF 268

Query: 64  SRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGREAVT 123
           SRGSSKYRGVTLHKCGRWEARMGQFLGKKY+YLGLFDSE+EAARAYDKAAIK NGREAVT
Sbjct: 269 SRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDKAAIKCNGREAVT 328

Query: 124 NFDQSSYEMEITFESENQEISDIDLNLGIAPPCPSEDQKDNLNGC----------APNFC 183
           NF+ S+Y+ E+  ++  Q  +D+DLNL I+ P  S+      +G             +  
Sbjct: 329 NFEPSTYDGELPTDAAAQG-ADVDLNLSISQPAASQQSPKRDSGSLGLQIHHGSFEGSEF 388

Query: 184 SLNKSDSERSELIMLQNHSSVAVKAQPSFMTCPN-FFPTYQGRA-----MEKIMEVESLP 243
              K+D+  SEL    +   +  +  P +   P+  FP  +  +       K  E  ++P
Sbjct: 389 KRAKNDAAPSELASRPHRFPLLTEHPPIWTAQPHPLFPNNEDASRSSDQKRKPSEGVAVP 448

Query: 244 NWGWRQIPIPH---GRATSVPFFSTAASSGFPSSPAA 262
           +W W+Q+   H        +PFFS+++SS   SS AA
Sbjct: 449 SWAWKQVSHHHPAPPHTLPLPFFSSSSSSPSSSSAAA 473

[Close]

BLAST of Lsi01G013650 vs. ExPASy Swiss-Prot
Match: Q2TQ34 (APETALA2-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=AP2-1 PE=1 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.1e-60
Identity = 137/277 (49.46%), Postives = 175/277 (63.18%), Query Frame = 0


Query: 4   AYDRAAIKFRGVHADINFNISDYNEEIKQLCFGASMADLQMSNFSKEEFVHILRRQSTGF 63
           AYDRAAIKFRGV ADINFN+SDY E+++           QM + SKEEFVH+LRRQSTGF
Sbjct: 209 AYDRAAIKFRGVEADINFNLSDYEEDMR-----------QMKSLSKEEFVHVLRRQSTGF 268

Query: 64  SRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGREAVT 123
           SRGSSKYRGVTLHKCGRWEARMGQFLGKKY+YLGLFDSE+EAARAYDKAAIK NGREAVT
Sbjct: 269 SRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDKAAIKCNGREAVT 328

Query: 124 NFDQSSYEMEITFESENQEISDIDLNLGIAPPCPSEDQKDNLNGC----------APNFC 183
           NF+ S+Y+ E+  ++  Q  +D+DLNL I+ P  S+      +G             +  
Sbjct: 329 NFEPSTYDGELPTDAAAQG-ADVDLNLRISQPAASQQSPKRDSGSLGLQIHHGSFEGSEF 388

Query: 184 SLNKSDSERSELIMLQNHSSVAVKAQPSFMTCPN-FFPTYQGRA-----MEKIMEVESLP 243
              K+D+  SEL    +   +  +  P +   P+  FP  +  +       K  E  ++P
Sbjct: 389 KRAKNDAAPSELASRPHRFPLLTEHPPIWTAQPHPLFPNNEDASRSSDQKRKPSEGVAVP 448

Query: 244 NWGWRQIPIPH---GRATSVPFFSTAASSGFPSSPAA 262
           +W W+Q+   H        +PFFS+++SS   SS AA
Sbjct: 449 SWAWKQVSHHHPAPPHTLPLPFFSSSSSSPSSSSAAA 473

[Close]

BLAST of Lsi01G013650 vs. ExPASy Swiss-Prot
Match: B8B8J2 (APETALA2-like protein 3 OS=Oryza sativa subsp. indica OX=39946 GN=AP2-3 PE=3 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 2.5e-60
Identity = 146/295 (49.49%), Postives = 186/295 (63.05%), Query Frame = 0


Query: 4   AYDRAAIKFRGVHADINFNISDYNEEIKQLCFGASMADLQMSNFSKEEFVHILRRQSTGF 63
           AYDRAAIKFRG+ ADINFN++DY +++K           QM N++KEEFVHILRRQSTGF
Sbjct: 160 AYDRAAIKFRGLDADINFNLNDYEDDLK-----------QMRNWTKEEFVHILRRQSTGF 219

Query: 64  SRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGREAVT 123
           +RGSSKYRGVTLHKCGRWEARMGQ LGKKY+YLGLFDSEIEAARAYD+AAI++NGREAVT
Sbjct: 220 ARGSSKYRGVTLHKCGRWEARMGQLLGKKYIYLGLFDSEIEAARAYDRAAIRFNGREAVT 279

Query: 124 NFDQSSYEMEITFESENQEISD--IDLNLGIAPPCPSEDQKD-NLNGCAPNFCSLNKSDS 183
           NFD SSY+ ++  E++N+ +    IDLNL I+ P   E + D  L G   N  S   S S
Sbjct: 280 NFDPSSYDGDVLPETDNEVVDGDIIDLNLRISQPNVHELKSDGTLTGFQLNCDSPEASSS 339

Query: 184 ERSELI-----MLQNHSSVAVKAQPSFMTCPNFFPTYQGRAMEKIMEV--ESLP-NWGWR 243
             ++ I     +L   +S++         CP FF   +   MEK  E+  +S P +W W+
Sbjct: 340 VVTQPISPQWPVLPQGTSMSQHPHLYASPCPGFFVNLREVPMEKRPELGPQSFPTSWSWQ 399

Query: 244 QIPIPHGRATSVPFFSTAASSGFPSSPAA-------LPPHLLPPPPFLRYYFLPS 281
                  + + +P   TAASSGF +   A         PH  P P   ++YF P+
Sbjct: 400 M------QGSPLPLLPTAASSGFSTGTVADAARAPSSRPH--PFPGHHQFYFPPT 435

[Close]

BLAST of Lsi01G013650 vs. ExPASy Swiss-Prot
Match: Q8H443 (APETALA2-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=AP2-3 PE=1 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 2.5e-60
Identity = 146/295 (49.49%), Postives = 186/295 (63.05%), Query Frame = 0


Query: 4   AYDRAAIKFRGVHADINFNISDYNEEIKQLCFGASMADLQMSNFSKEEFVHILRRQSTGF 63
           AYDRAAIKFRG+ ADINFN++DY +++K           QM N++KEEFVHILRRQSTGF
Sbjct: 160 AYDRAAIKFRGLDADINFNLNDYEDDLK-----------QMRNWTKEEFVHILRRQSTGF 219

Query: 64  SRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGREAVT 123
           +RGSSKYRGVTLHKCGRWEARMGQ LGKKY+YLGLFDSEIEAARAYD+AAI++NGREAVT
Sbjct: 220 ARGSSKYRGVTLHKCGRWEARMGQLLGKKYIYLGLFDSEIEAARAYDRAAIRFNGREAVT 279

Query: 124 NFDQSSYEMEITFESENQEISD--IDLNLGIAPPCPSEDQKD-NLNGCAPNFCSLNKSDS 183
           NFD SSY+ ++  E++N+ +    IDLNL I+ P   E + D  L G   N  S   S S
Sbjct: 280 NFDPSSYDGDVLPETDNEVVDGDIIDLNLRISQPNVHELKSDGTLTGFQLNCDSPEASSS 339

Query: 184 ERSELI-----MLQNHSSVAVKAQPSFMTCPNFFPTYQGRAMEKIMEV--ESLP-NWGWR 243
             ++ I     +L   +S++         CP FF   +   MEK  E+  +S P +W W+
Sbjct: 340 VVTQPISPQWPVLPQGTSMSQHPHLYASPCPGFFVNLREVPMEKRPELGPQSFPTSWSWQ 399

Query: 244 QIPIPHGRATSVPFFSTAASSGFPSSPAA-------LPPHLLPPPPFLRYYFLPS 281
                  + + +P   TAASSGF +   A         PH  P P   ++YF P+
Sbjct: 400 M------QGSPLPLLPTAASSGFSTGTVADAARSPSSRPH--PFPGHHQFYFPPT 435

[Close]

BLAST of Lsi01G013650 vs. ExPASy Swiss-Prot
Match: B8AMA9 (APETALA2-like protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=AP2-2 PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 9.8e-57
Identity = 134/299 (44.82%), Postives = 182/299 (60.87%), Query Frame = 0


Query: 4   AYDRAAIKFRGVHADINFNISDYNEEIKQLCFGASMADLQMSNFSKEEFVHILRRQSTGF 63
           AYDRAAIKFRG+ ADINFN+SDY +++K           QM N++KEEFVHILRRQSTGF
Sbjct: 156 AYDRAAIKFRGLEADINFNLSDYEDDLK-----------QMRNWTKEEFVHILRRQSTGF 215

Query: 64  SRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGREAVT 123
           +RGSSK+RGVTLHKCGRWEARMGQ LGKKY+YLGLFD+E+EAARAYD+AAI++NGREAVT
Sbjct: 216 ARGSSKFRGVTLHKCGRWEARMGQLLGKKYIYLGLFDTEVEAARAYDRAAIRFNGREAVT 275

Query: 124 NFDQSSYEMEITFESENQEI--SDIDLNLGIAPPCPSEDQKDNLNGCAPNFCSLNKSDSE 183
           NF+ +SY ++   ++ N+ I   D+DL+L I+ P    + +D+ +  A     L     E
Sbjct: 276 NFEPASYNVDALPDAGNEAIVDGDLDLDLRISQP----NARDSKSDVATTGLQLTCDSPE 335

Query: 184 RSELIMLQ----------NHSSVAVKAQPSFM---TCPNFFPTYQGRAMEKIMEVESL-- 243
            S + + Q          +H S  +  Q   +    C  F P  Q R M++ +E+  +  
Sbjct: 336 SSNITVHQPMGSSPQWTVHHQSTPLPPQHQRLYPSHCLGFLPNLQERPMDRRLELGPMPF 395

Query: 244 PNWGWR-----QIPIPHGRATSVPFFSTAASSGFPSSPAALPPHLLPPPPFLRYYFLPS 281
           P   W+      +P+ H  A+S   FS  A +G  ++    PP     P    +YF P+
Sbjct: 396 PTQAWQMQAPSHLPLLHAAASS--GFSAGAGAGVAAATRRQPPFPADHP----FYFPPT 433

[Close]

BLAST of Lsi01G013650 vs. ExPASy TrEMBL
Match: A0A1S3BML4 (floral homeotic protein APETALA 2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491207 PE=4 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 2.9e-128
Identity = 237/296 (80.07%), Postives = 255/296 (86.15%), Query Frame = 0


Query: 4   AYDRAAIKFRGVHADINFNISDYNEEIKQLCFGASMADLQMSNFSKEEFVHILRRQSTGF 63
           AYDRAAIKFRGVHADINFNI+DYNEEIK           QM NFSKEEFVHILRRQSTGF
Sbjct: 169 AYDRAAIKFRGVHADINFNINDYNEEIK-----------QMGNFSKEEFVHILRRQSTGF 228

Query: 64  SRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGREAVT 123
           SRGSSK+RGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGREAVT
Sbjct: 229 SRGSSKFRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGREAVT 288

Query: 124 NFDQSSYEMEITFESENQEISDIDLNLGIAPPCPSEDQKDNLNGCAP-NFCSLNKSDSER 183
           NFDQSSYE E+ FESENQ+  DIDLNLGIAPPCPSEDQKDNLNGCAP N C+LNKS+SER
Sbjct: 289 NFDQSSYETELAFESENQDTGDIDLNLGIAPPCPSEDQKDNLNGCAPSNLCNLNKSNSER 348

Query: 184 SELIMLQNHSSVAVKAQPSFMTCPNFFPTYQGRAMEKIMEVESLPNWGWRQIPIPHGRAT 243
           SE IML+ H+S+A +A PS ++ PNFFPTYQ RAMEK MEVESLPN  WR I +P+G AT
Sbjct: 349 SEFIMLEKHASMATRANPSVLSSPNFFPTYQERAMEKKMEVESLPNCCWRPISMPYGGAT 408

Query: 244 SVPFFSTAASSGFPSSPAALPP----HLLPPPPFLRYYFLPSIPATNSVPHFYCST 295
           SVPFFSTAASSGFPSSPAA+PP    HLLP PPFL ++  PSIPATN+V HFYC T
Sbjct: 409 SVPFFSTAASSGFPSSPAAIPPPSPRHLLPLPPFLHHHIPPSIPATNAVTHFYCKT 453

[Close]

BLAST of Lsi01G013650 vs. ExPASy TrEMBL
Match: A0A0A0L210 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G292470 PE=4 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 4.2e-127
Identity = 240/299 (80.27%), Postives = 258/299 (86.29%), Query Frame = 0


Query: 4   AYDRAAIKFRGVHADINFNISDYNEEIKQLCFGASMADLQMSNFSKEEFVHILRRQSTGF 63
           AYDRAAIKFRGVHADINFNISDYNEEIK           QM NFSKEEFVHILRRQSTGF
Sbjct: 169 AYDRAAIKFRGVHADINFNISDYNEEIK-----------QMGNFSKEEFVHILRRQSTGF 228

Query: 64  SRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGREAVT 123
           SRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGREAVT
Sbjct: 229 SRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGREAVT 288

Query: 124 NFDQSSYEMEITFESENQEISDIDLNLGIAPPCPSEDQKDNLNGCAP-NFCSLNKSDSER 183
           NFDQSSYEME+ FESENQ++ DIDLNLGIAPPCPSEDQKDNLNGCAP N C+LNKS+SER
Sbjct: 289 NFDQSSYEMELAFESENQDMGDIDLNLGIAPPCPSEDQKDNLNGCAPSNLCNLNKSNSER 348

Query: 184 SELIML-QNHSSVAVKAQPSFMTCPNFFPTYQGRAMEKIMEVESLPNWGWRQIPIPHGRA 243
           SE IML + H+S+A++A PSF++ PNFFPTYQ RAMEK MEVESLPN  WR I +P+G A
Sbjct: 349 SEFIMLAEKHASMAIRANPSFLSPPNFFPTYQERAMEKKMEVESLPNCCWRPISVPYGGA 408

Query: 244 TSVPFFSTAASSGFPS-SPAAL-----PPHLLPPPPFLRYYFLPSIPATNSVPHFYCST 295
           TSVPFFSTAASSGFPS SPAA+     P HLLP PPFL ++  PSIPATN+V HFYC T
Sbjct: 409 TSVPFFSTAASSGFPSNSPAAVVPPPSPRHLLPLPPFLHHHIPPSIPATNTVTHFYCKT 456

[Close]

BLAST of Lsi01G013650 vs. ExPASy TrEMBL
Match: A0A5A7U0W6 (Floral homeotic protein APETALA 2-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G00790 PE=4 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 7.1e-127
Identity = 237/297 (79.80%), Postives = 255/297 (85.86%), Query Frame = 0


Query: 4   AYDRAAIKFRGVHADINFNISDYNEEIKQLCFGASMADLQMSNFSKEEFVHILRRQSTGF 63
           AYDRAAIKFRGVHADINFNI+DYNEEIK           QM NFSKEEFVHILRRQSTGF
Sbjct: 169 AYDRAAIKFRGVHADINFNINDYNEEIK-----------QMGNFSKEEFVHILRRQSTGF 228

Query: 64  SRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGREAVT 123
           SRGSSK+RGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGREAVT
Sbjct: 229 SRGSSKFRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGREAVT 288

Query: 124 NFDQSSYEMEITFESENQEISDIDLNLGIAPPCPSEDQKDNLNGCAP-NFCSLNKSDSER 183
           NFDQSSYE E+ FESENQ+  DIDLNLGIAPPCPSEDQKDNLNGCAP N C+LNKS+SER
Sbjct: 289 NFDQSSYETELAFESENQDTGDIDLNLGIAPPCPSEDQKDNLNGCAPSNLCNLNKSNSER 348

Query: 184 SELIM-LQNHSSVAVKAQPSFMTCPNFFPTYQGRAMEKIMEVESLPNWGWRQIPIPHGRA 243
           SE IM L+ H+S+A +A PS ++ PNFFPTYQ RAMEK MEVESLPN  WR I +P+G A
Sbjct: 349 SEFIMQLEKHASMATRANPSVLSSPNFFPTYQERAMEKKMEVESLPNCCWRPISMPYGGA 408

Query: 244 TSVPFFSTAASSGFPSSPAALPP----HLLPPPPFLRYYFLPSIPATNSVPHFYCST 295
           TSVPFFSTAASSGFPSSPAA+PP    HLLP PPFL ++  PSIPATN+V HFYC T
Sbjct: 409 TSVPFFSTAASSGFPSSPAAIPPPSPRHLLPLPPFLHHHIPPSIPATNAVTHFYCKT 454

[Close]

BLAST of Lsi01G013650 vs. ExPASy TrEMBL
Match: A0A1S3BMB1 (floral homeotic protein APETALA 2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491207 PE=4 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 7.1e-127
Identity = 237/297 (79.80%), Postives = 255/297 (85.86%), Query Frame = 0


Query: 4   AYDRAAIKFRGVHADINFNISDYNEEIKQLCFGASMADLQMSNFSKEEFVHILRRQSTGF 63
           AYDRAAIKFRGVHADINFNI+DYNEEIK           QM NFSKEEFVHILRRQSTGF
Sbjct: 169 AYDRAAIKFRGVHADINFNINDYNEEIK-----------QMGNFSKEEFVHILRRQSTGF 228

Query: 64  SRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGREAVT 123
           SRGSSK+RGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGREAVT
Sbjct: 229 SRGSSKFRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGREAVT 288

Query: 124 NFDQSSYEMEITFESENQEISDIDLNLGIAPPCPSEDQKDNLNGCAP-NFCSLNKSDSER 183
           NFDQSSYE E+ FESENQ+  DIDLNLGIAPPCPSEDQKDNLNGCAP N C+LNKS+SER
Sbjct: 289 NFDQSSYETELAFESENQDTGDIDLNLGIAPPCPSEDQKDNLNGCAPSNLCNLNKSNSER 348

Query: 184 SELIM-LQNHSSVAVKAQPSFMTCPNFFPTYQGRAMEKIMEVESLPNWGWRQIPIPHGRA 243
           SE IM L+ H+S+A +A PS ++ PNFFPTYQ RAMEK MEVESLPN  WR I +P+G A
Sbjct: 349 SEFIMQLEKHASMATRANPSVLSSPNFFPTYQERAMEKKMEVESLPNCCWRPISMPYGGA 408

Query: 244 TSVPFFSTAASSGFPSSPAALPP----HLLPPPPFLRYYFLPSIPATNSVPHFYCST 295
           TSVPFFSTAASSGFPSSPAA+PP    HLLP PPFL ++  PSIPATN+V HFYC T
Sbjct: 409 TSVPFFSTAASSGFPSSPAAIPPPSPRHLLPLPPFLHHHIPPSIPATNAVTHFYCKT 454

[Close]

BLAST of Lsi01G013650 vs. ExPASy TrEMBL
Match: A0A6J1CQ52 (ethylene-responsive transcription factor RAP2-7-like OS=Momordica charantia OX=3673 GN=LOC111013551 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 7.7e-97
Identity = 189/236 (80.08%), Postives = 199/236 (84.32%), Query Frame = 0


Query: 44  MSNFSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEI 103
           MSNFSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEI
Sbjct: 1   MSNFSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEI 60

Query: 104 EAARAYDKAAIKYNGREAVTNFDQSSYEMEITFESENQEISDIDLNLGIAPPCPSEDQKD 163
           EAARAYDKAAIKYNGREAVTNFDQSSYE EI+ ESENQ++ DIDLNLGIAPPC SEDQKD
Sbjct: 61  EAARAYDKAAIKYNGREAVTNFDQSSYEGEISIESENQDMGDIDLNLGIAPPCSSEDQKD 120

Query: 164 NLNGCAPNFCSLNKSDSERSELIMLQNHSSVAVKAQPSFMTCPNFFPTYQGRAMEKIMEV 223
           NLNGCAPNF     SDSER   +ML NH+SVAV+  P  ++C NFFPTYQ RAMEK ME+
Sbjct: 121 NLNGCAPNFIGFKNSDSERRCGVMLGNHASVAVRPHPPCLSCANFFPTYQERAMEKRMEI 180

Query: 224 ESLPNWGWRQIPIPHGRATSVPFFSTAASSGFP--SSPAALPP-----HLLPPPPF 273
           ESLPNWGW QIP P+G ATSV FFSTAASSGFP  SS A LP      HLLP   F
Sbjct: 181 ESLPNWGW-QIPSPYGGATSVHFFSTAASSGFPSSSSSAVLPQPSSARHLLPASTF 235

[Close]

BLAST of Lsi01G013650 vs. NCBI nr
Match: XP_038881408.1 (APETALA2-like protein 3 [Benincasa hispida])

HSP 1 Score: 499.2 bits (1284), Expect = 2.4e-137
Identity = 252/295 (85.42%), Postives = 262/295 (88.81%), Query Frame = 0


Query: 4   AYDRAAIKFRGVHADINFNISDYNEEIKQLCFGASMADLQMSNFSKEEFVHILRRQSTGF 63
           AYDRAAIKFRGVHADINFNISDY E+IK           QMSNFSKEEFVHILRRQSTGF
Sbjct: 169 AYDRAAIKFRGVHADINFNISDYAEDIK-----------QMSNFSKEEFVHILRRQSTGF 228

Query: 64  SRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGREAVT 123
           SRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGREAVT
Sbjct: 229 SRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGREAVT 288

Query: 124 NFDQSSYEMEITFESENQEISDIDLNLGIAPPCPSEDQKDNLNGCAPNFCSLNKSDSERS 183
           NFDQSSY+MEI FESENQ++ DIDLNLGIAPP PSEDQKDNLNGC PNFCSLNKSDSERS
Sbjct: 289 NFDQSSYQMEIAFESENQDMGDIDLNLGIAPPWPSEDQKDNLNGCVPNFCSLNKSDSERS 348

Query: 184 ELIMLQNHSSVAVKAQPSFMTCPNFFPTYQGRAMEKIMEVESLPNWGWRQIPIPHGRATS 243
            LIML+NH+S+AVKA P FM+CPNFFPTYQGRAMEKIMEVESLPNWGWRQIPIP+G ATS
Sbjct: 349 GLIMLENHASLAVKAHPYFMSCPNFFPTYQGRAMEKIMEVESLPNWGWRQIPIPYGGATS 408

Query: 244 VPFFSTAASSGFPSSPAAL----PPHLLPPPPFLRYYFLPSIPATNSVPHFYCST 295
           VPFFSTAASSGFPSSPAAL    PPHLL  PPF RY F    PATN+VPHFYC T
Sbjct: 409 VPFFSTAASSGFPSSPAALPPPSPPHLLSVPPFFRYLF----PATNTVPHFYCRT 448

[Close]

BLAST of Lsi01G013650 vs. NCBI nr
Match: XP_008449285.1 (PREDICTED: floral homeotic protein APETALA 2-like isoform X2 [Cucumis melo])

HSP 1 Score: 468.0 bits (1203), Expect = 6.0e-128
Identity = 237/296 (80.07%), Postives = 255/296 (86.15%), Query Frame = 0


Query: 4   AYDRAAIKFRGVHADINFNISDYNEEIKQLCFGASMADLQMSNFSKEEFVHILRRQSTGF 63
           AYDRAAIKFRGVHADINFNI+DYNEEIK           QM NFSKEEFVHILRRQSTGF
Sbjct: 169 AYDRAAIKFRGVHADINFNINDYNEEIK-----------QMGNFSKEEFVHILRRQSTGF 228

Query: 64  SRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGREAVT 123
           SRGSSK+RGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGREAVT
Sbjct: 229 SRGSSKFRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGREAVT 288

Query: 124 NFDQSSYEMEITFESENQEISDIDLNLGIAPPCPSEDQKDNLNGCAP-NFCSLNKSDSER 183
           NFDQSSYE E+ FESENQ+  DIDLNLGIAPPCPSEDQKDNLNGCAP N C+LNKS+SER
Sbjct: 289 NFDQSSYETELAFESENQDTGDIDLNLGIAPPCPSEDQKDNLNGCAPSNLCNLNKSNSER 348

Query: 184 SELIMLQNHSSVAVKAQPSFMTCPNFFPTYQGRAMEKIMEVESLPNWGWRQIPIPHGRAT 243
           SE IML+ H+S+A +A PS ++ PNFFPTYQ RAMEK MEVESLPN  WR I +P+G AT
Sbjct: 349 SEFIMLEKHASMATRANPSVLSSPNFFPTYQERAMEKKMEVESLPNCCWRPISMPYGGAT 408

Query: 244 SVPFFSTAASSGFPSSPAALPP----HLLPPPPFLRYYFLPSIPATNSVPHFYCST 295
           SVPFFSTAASSGFPSSPAA+PP    HLLP PPFL ++  PSIPATN+V HFYC T
Sbjct: 409 SVPFFSTAASSGFPSSPAAIPPPSPRHLLPLPPFLHHHIPPSIPATNAVTHFYCKT 453

[Close]

BLAST of Lsi01G013650 vs. NCBI nr
Match: XP_004142222.1 (APETALA2-like protein 2 [Cucumis sativus] >KGN54186.1 hypothetical protein Csa_018137 [Cucumis sativus])

HSP 1 Score: 464.2 bits (1193), Expect = 8.6e-127
Identity = 240/299 (80.27%), Postives = 258/299 (86.29%), Query Frame = 0


Query: 4   AYDRAAIKFRGVHADINFNISDYNEEIKQLCFGASMADLQMSNFSKEEFVHILRRQSTGF 63
           AYDRAAIKFRGVHADINFNISDYNEEIK           QM NFSKEEFVHILRRQSTGF
Sbjct: 169 AYDRAAIKFRGVHADINFNISDYNEEIK-----------QMGNFSKEEFVHILRRQSTGF 228

Query: 64  SRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGREAVT 123
           SRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGREAVT
Sbjct: 229 SRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGREAVT 288

Query: 124 NFDQSSYEMEITFESENQEISDIDLNLGIAPPCPSEDQKDNLNGCAP-NFCSLNKSDSER 183
           NFDQSSYEME+ FESENQ++ DIDLNLGIAPPCPSEDQKDNLNGCAP N C+LNKS+SER
Sbjct: 289 NFDQSSYEMELAFESENQDMGDIDLNLGIAPPCPSEDQKDNLNGCAPSNLCNLNKSNSER 348

Query: 184 SELIML-QNHSSVAVKAQPSFMTCPNFFPTYQGRAMEKIMEVESLPNWGWRQIPIPHGRA 243
           SE IML + H+S+A++A PSF++ PNFFPTYQ RAMEK MEVESLPN  WR I +P+G A
Sbjct: 349 SEFIMLAEKHASMAIRANPSFLSPPNFFPTYQERAMEKKMEVESLPNCCWRPISVPYGGA 408

Query: 244 TSVPFFSTAASSGFPS-SPAAL-----PPHLLPPPPFLRYYFLPSIPATNSVPHFYCST 295
           TSVPFFSTAASSGFPS SPAA+     P HLLP PPFL ++  PSIPATN+V HFYC T
Sbjct: 409 TSVPFFSTAASSGFPSNSPAAVVPPPSPRHLLPLPPFLHHHIPPSIPATNTVTHFYCKT 456

[Close]

BLAST of Lsi01G013650 vs. NCBI nr
Match: XP_008449284.1 (PREDICTED: floral homeotic protein APETALA 2-like isoform X1 [Cucumis melo] >KAA0047285.1 floral homeotic protein APETALA 2-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 463.4 bits (1191), Expect = 1.5e-126
Identity = 237/297 (79.80%), Postives = 255/297 (85.86%), Query Frame = 0


Query: 4   AYDRAAIKFRGVHADINFNISDYNEEIKQLCFGASMADLQMSNFSKEEFVHILRRQSTGF 63
           AYDRAAIKFRGVHADINFNI+DYNEEIK           QM NFSKEEFVHILRRQSTGF
Sbjct: 169 AYDRAAIKFRGVHADINFNINDYNEEIK-----------QMGNFSKEEFVHILRRQSTGF 228

Query: 64  SRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGREAVT 123
           SRGSSK+RGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGREAVT
Sbjct: 229 SRGSSKFRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGREAVT 288

Query: 124 NFDQSSYEMEITFESENQEISDIDLNLGIAPPCPSEDQKDNLNGCAP-NFCSLNKSDSER 183
           NFDQSSYE E+ FESENQ+  DIDLNLGIAPPCPSEDQKDNLNGCAP N C+LNKS+SER
Sbjct: 289 NFDQSSYETELAFESENQDTGDIDLNLGIAPPCPSEDQKDNLNGCAPSNLCNLNKSNSER 348

Query: 184 SELIM-LQNHSSVAVKAQPSFMTCPNFFPTYQGRAMEKIMEVESLPNWGWRQIPIPHGRA 243
           SE IM L+ H+S+A +A PS ++ PNFFPTYQ RAMEK MEVESLPN  WR I +P+G A
Sbjct: 349 SEFIMQLEKHASMATRANPSVLSSPNFFPTYQERAMEKKMEVESLPNCCWRPISMPYGGA 408

Query: 244 TSVPFFSTAASSGFPSSPAALPP----HLLPPPPFLRYYFLPSIPATNSVPHFYCST 295
           TSVPFFSTAASSGFPSSPAA+PP    HLLP PPFL ++  PSIPATN+V HFYC T
Sbjct: 409 TSVPFFSTAASSGFPSSPAAIPPPSPRHLLPLPPFLHHHIPPSIPATNAVTHFYCKT 454

[Close]

BLAST of Lsi01G013650 vs. NCBI nr
Match: XP_022143709.1 (ethylene-responsive transcription factor RAP2-7-like [Momordica charantia])

HSP 1 Score: 363.6 bits (932), Expect = 1.6e-96
Identity = 189/236 (80.08%), Postives = 199/236 (84.32%), Query Frame = 0


Query: 44  MSNFSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEI 103
           MSNFSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEI
Sbjct: 1   MSNFSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEI 60

Query: 104 EAARAYDKAAIKYNGREAVTNFDQSSYEMEITFESENQEISDIDLNLGIAPPCPSEDQKD 163
           EAARAYDKAAIKYNGREAVTNFDQSSYE EI+ ESENQ++ DIDLNLGIAPPC SEDQKD
Sbjct: 61  EAARAYDKAAIKYNGREAVTNFDQSSYEGEISIESENQDMGDIDLNLGIAPPCSSEDQKD 120

Query: 164 NLNGCAPNFCSLNKSDSERSELIMLQNHSSVAVKAQPSFMTCPNFFPTYQGRAMEKIMEV 223
           NLNGCAPNF     SDSER   +ML NH+SVAV+  P  ++C NFFPTYQ RAMEK ME+
Sbjct: 121 NLNGCAPNFIGFKNSDSERRCGVMLGNHASVAVRPHPPCLSCANFFPTYQERAMEKRMEI 180

Query: 224 ESLPNWGWRQIPIPHGRATSVPFFSTAASSGFP--SSPAALPP-----HLLPPPPF 273
           ESLPNWGW QIP P+G ATSV FFSTAASSGFP  SS A LP      HLLP   F
Sbjct: 181 ESLPNWGW-QIPSPYGGATSVHFFSTAASSGFPSSSSSAVLPQPSSARHLLPASTF 235

[Close]

BLAST of Lsi01G013650 vs. TAIR 10
Match: AT2G28550.3 (related to AP2.7 )

HSP 1 Score: 238.0 bits (606), Expect = 9.4e-63
Identity = 153/298 (51.34%), Postives = 178/298 (59.73%), Query Frame = 0


Query: 4   AYDRAAIKFRGVHADINFNISDYNEEIKQLCFGASMADLQMSNFSKEEFVHILRRQSTGF 63
           AYDRAAIKFRGV ADINF + DY E++K           Q+ N SKEEFVHILRRQSTGF
Sbjct: 191 AYDRAAIKFRGVDADINFTLGDYEEDMK-----------QVQNLSKEEFVHILRRQSTGF 250

Query: 64  SRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGREAVT 123
           SRGSSKYRGVTLHKCGRWEARMGQFLGKKY+YLGLFDSE+EAARAYDKAAI  NGREAVT
Sbjct: 251 SRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDKAAINTNGREAVT 310

Query: 124 NFDQSSYEMEITFESENQEISDIDLNLGIAPPCPSEDQKDNLNGCAPNFCSLNKSDSERS 183
           NF+ SSY+ EI  ES N   S+IDLNLGI+    S       NG   +F S N  +++R 
Sbjct: 311 NFEMSSYQNEINSESNN---SEIDLNLGIS---LSTGNAPKQNGRLFHFPS-NTYETQRG 370

Query: 184 ELIMLQN-HSSVAVKAQPSFMT----------CPNFFPTYQGRAMEKIMEVES-LPNWGW 243
             + + N +    V     + +          CP++    +GRA EK  E E  + NWGW
Sbjct: 371 VSLRIDNEYMGKPVNTPLPYGSSDHRLYWNGACPSYNNPAEGRATEKRSEAEGMMSNWGW 430

Query: 244 RQ-------IPIPHGRATSVPFFSTAASSGFPSSPAALPPHLLPPPP---FLRYYFLP 280
           ++        P P G      F   AASSGF         H  P PP     R YF P
Sbjct: 431 QRPGQTSAVRPQPPGPQPPPLFSVAAASSGF--------SHFRPQPPNDNATRGYFYP 462

[Close]

BLAST of Lsi01G013650 vs. TAIR 10
Match: AT4G36920.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 209.5 bits (532), Expect = 3.6e-54
Identity = 104/150 (69.33%), Postives = 120/150 (80.00%), Query Frame = 0


Query: 4   AYDRAAIKFRGVHADINFNISDYNEEIKQLCFGASMADLQMSNFSKEEFVHILRRQSTGF 63
           AYDRAAIKFRGV ADINFNI DY++++K           QM+N +KEEFVH+LRRQSTGF
Sbjct: 169 AYDRAAIKFRGVEADINFNIDDYDDDLK-----------QMTNLTKEEFVHVLRRQSTGF 228

Query: 64  SRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGREAVT 123
            RGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFD+E+EAARAYDKAAIK NG++AVT
Sbjct: 229 PRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDKAAIKCNGKDAVT 288

Query: 124 NFDQSSYEMEITFESENQEISDIDLNLGIA 154
           NFD S Y+ E+  ES     +  D NL ++
Sbjct: 289 NFDPSIYDEELNAESSGNPTTPQDHNLDLS 307

[Close]

BLAST of Lsi01G013650 vs. TAIR 10
Match: AT4G36920.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 209.5 bits (532), Expect = 3.6e-54
Identity = 104/150 (69.33%), Postives = 120/150 (80.00%), Query Frame = 0


Query: 4   AYDRAAIKFRGVHADINFNISDYNEEIKQLCFGASMADLQMSNFSKEEFVHILRRQSTGF 63
           AYDRAAIKFRGV ADINFNI DY++++K           QM+N +KEEFVH+LRRQSTGF
Sbjct: 169 AYDRAAIKFRGVEADINFNIDDYDDDLK-----------QMTNLTKEEFVHVLRRQSTGF 228

Query: 64  SRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGREAVT 123
            RGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFD+E+EAARAYDKAAIK NG++AVT
Sbjct: 229 PRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDKAAIKCNGKDAVT 288

Query: 124 NFDQSSYEMEITFESENQEISDIDLNLGIA 154
           NFD S Y+ E+  ES     +  D NL ++
Sbjct: 289 NFDPSIYDEELNAESSGNPTTPQDHNLDLS 307

[Close]

BLAST of Lsi01G013650 vs. TAIR 10
Match: AT2G28550.1 (related to AP2.7 )

HSP 1 Score: 199.5 bits (506), Expect = 3.7e-51
Identity = 140/298 (46.98%), Postives = 163/298 (54.70%), Query Frame = 0


Query: 4   AYDRAAIKFRGVHADINFNISDYNEEIKQLCFGASMADLQMSNFSKEEFVHILRRQSTGF 63
           AYDRAAIKFRGV ADINF + DY E++K           Q+ N SKEEFVHILRRQSTGF
Sbjct: 191 AYDRAAIKFRGVDADINFTLGDYEEDMK-----------QVQNLSKEEFVHILRRQSTGF 250

Query: 64  SRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGREAVT 123
           SRGSSKYRGVTLHKCGRWEARMGQFLGKK               AYDKAAI  NGREAVT
Sbjct: 251 SRGSSKYRGVTLHKCGRWEARMGQFLGKK---------------AYDKAAINTNGREAVT 310

Query: 124 NFDQSSYEMEITFESENQEISDIDLNLGIAPPCPSEDQKDNLNGCAPNFCSLNKSDSERS 183
           NF+ SSY+ EI  ES N   S+IDLNLGI+    S       NG   +F S N  +++R 
Sbjct: 311 NFEMSSYQNEINSESNN---SEIDLNLGIS---LSTGNAPKQNGRLFHFPS-NTYETQRG 370

Query: 184 ELIMLQN-HSSVAVKAQPSFMT----------CPNFFPTYQGRAMEKIMEVES-LPNWGW 243
             + + N +    V     + +          CP++    +GRA EK  E E  + NWGW
Sbjct: 371 VSLRIDNEYMGKPVNTPLPYGSSDHRLYWNGACPSYNNPAEGRATEKRSEAEGMMSNWGW 430

Query: 244 RQ-------IPIPHGRATSVPFFSTAASSGFPSSPAALPPHLLPPPP---FLRYYFLP 280
           ++        P P G      F   AASSGF         H  P PP     R YF P
Sbjct: 431 QRPGQTSAVRPQPPGPQPPPLFSVAAASSGF--------SHFRPQPPNDNATRGYFYP 447

[Close]

BLAST of Lsi01G013650 vs. TAIR 10
Match: AT5G67180.1 (target of early activation tagged (EAT) 3 )

HSP 1 Score: 194.1 bits (492), Expect = 1.6e-49
Identity = 100/149 (67.11%), Postives = 116/149 (77.85%), Query Frame = 0


Query: 4   AYDRAAIKFRGVHADINFNISDYNEEIKQLCFGASMADLQMSNFSKEEFVHILRRQSTGF 63
           AYDRAAIKFRGV ADINF+I DY +++K           QM N +KEEF+H+LRRQSTGF
Sbjct: 134 AYDRAAIKFRGVDADINFDIEDYLDDLK-----------QMGNLTKEEFMHVLRRQSTGF 193

Query: 64  SRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDSEIEAARAYDKAAIKYNGREAVT 123
            RGSSKYRGVTLHKCGRWE+R+GQFL KKYVYLGLFD+EIEAARAYDKAAIK NG++AVT
Sbjct: 194 PRGSSKYRGVTLHKCGRWESRLGQFLNKKYVYLGLFDTEIEAARAYDKAAIKCNGKDAVT 253

Query: 124 NFDQSSYEMEITFESE-NQEISDIDLNLG 152
           NFD   YE E    SE  +   ++ L+LG
Sbjct: 254 NFDPKVYEEEEDLSSETTRNGHNLGLSLG 271

The following BLAST results are available for this feature:

BLAST of Lsi01G013650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B8AXC3	6.6e-61	49.46	APETALA2-like protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=AP2-1 PE=2 SV=...	[more]
Q2TQ34	1.1e-60	49.46	APETALA2-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=AP2-1 PE=1 S...	[more]
B8B8J2	2.5e-60	49.49	APETALA2-like protein 3 OS=Oryza sativa subsp. indica OX=39946 GN=AP2-3 PE=3 SV=...	[more]
Q8H443	2.5e-60	49.49	APETALA2-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=AP2-3 PE=1 S...	[more]
B8AMA9	9.8e-57	44.82	APETALA2-like protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=AP2-2 PE=3 SV=...	[more]

BLAST of Lsi01G013650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BML4	2.9e-128	80.07	floral homeotic protein APETALA 2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A0A0L210	4.2e-127	80.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G292470 PE=4 SV=1	[more]
A0A5A7U0W6	7.1e-127	79.80	Floral homeotic protein APETALA 2-like isoform X1 OS=Cucumis melo var. makuwa OX...	[more]
A0A1S3BMB1	7.1e-127	79.80	floral homeotic protein APETALA 2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1CQ52	7.7e-97	80.08	ethylene-responsive transcription factor RAP2-7-like OS=Momordica charantia OX=3...	[more]

BLAST of Lsi01G013650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881408.1	2.4e-137	85.42	APETALA2-like protein 3 [Benincasa hispida]	[more]
XP_008449285.1	6.0e-128	80.07	PREDICTED: floral homeotic protein APETALA 2-like isoform X2 [Cucumis melo]	[more]
XP_004142222.1	8.6e-127	80.27	APETALA2-like protein 2 [Cucumis sativus] >KGN54186.1 hypothetical protein Csa_0...	[more]
XP_008449284.1	1.5e-126	79.80	PREDICTED: floral homeotic protein APETALA 2-like isoform X1 [Cucumis melo] >KAA...	[more]
XP_022143709.1	1.6e-96	80.08	ethylene-responsive transcription factor RAP2-7-like [Momordica charantia]	[more]

BLAST of Lsi01G013650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28550.3	9.4e-63	51.34	related to AP2.7	[more]
AT4G36920.1	3.6e-54	69.33	Integrase-type DNA-binding superfamily protein	[more]
AT4G36920.2	3.6e-54	69.33	Integrase-type DNA-binding superfamily protein	[more]
AT2G28550.1	3.7e-51	46.98	related to AP2.7	[more]
AT5G67180.1	1.6e-49	67.11	target of early activation tagged (EAT) 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 70..81 score: 45.91 coord: 108..128 score: 47.71
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 69..132 e-value: 9.0E-30 score: 114.9
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 68..118 e-value: 7.9E-11 score: 42.0
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 69..126 score: 16.12018
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 68..128 e-value: 2.50583E-26 score: 96.5718
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 68..128 e-value: 9.2E-22 score: 79.0
None	No IPR available	PANTHER	PTHR32467:SF124	AP2 DOMAIN TRANSCRIPTION FACTOR	coord: 4..264
None	No IPR available	PANTHER	PTHR32467	AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR	coord: 4..264
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 68..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G013650.1	Lsi01G013650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity