Lsi01G012190 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTCTGCAGCGCGTAGGAGTGGAGGCGGCCTCTTTGAAGGGCTTTATAGAGTTATTATGCGCCGGAATTCCGTTTATGTCACCTTCATTATCGCCGGCGCTTTCGTTGGAGAGCGGGTAAGGATCAGAAATCTTGTCTATATTGTGTACTGGATTCATCTTTTTGGTTTCTTTATCCACCTGCTTGCTGAGGGATAGAGAGAAATGAGAATAAAAGTACAATCTCAGTGGGCAATAGACCGTATTACTTTGTCGATTGGTTTATCGGGATTAGCGAGATTGGGATGTAGGAACCATCTCTATTTGTCGAAATGTTGAAATCTGAATTGAACTGGTTTATTAATGTTCTCCTCGTCATGTAAATTCGCATCGAATACTCCATTGCTGAAAATGAGAGGAAATTGGACGTTTTGATCAGAAGTCGCTTCTGGAAGTAATTCATTTATTGATTTTGCTGCTGTGAAGAGATCTATGGGTTTGGCTGTTGAATATGAAACTTTGAATATCTAATGATATGCTCGTTTATTTTCATGTAAATTCGTTCCCGCCAAATGAACGTGTAGAGTTTTAGCCTGTTTACTTTTGGATTATGCAGTTGGCTTGCCTATCCCCCGATGCATTGAAACAATTTTCATTTATTCATCTGATAGCTCGTTAAATCTGAGGGGTGAAGTATTTCATCATTTTGGAGTTTGAGATTGGTGTCAACTGTTTTTGCATTCATTCTTCTGTACCGTTTGCTGGAATATGCATTCCATTACTTGCTACAAAATTATTTGGCGTTCCTTTGGTTATTTGTTTAATTTAAATTATTTTAGTTTTCTGGGTTGTGTTAGACTATGAGCATCAGTATTAGCTTCTTACTGCTTTTGGCTTTTCTGCTGTAGGCTGTGGATTATGGAGTTCACAAGCTCTGGGAATACAACAATGTTGGGGTATGACATAACTATCCTGTGGTTGTTTTTCTTTAGTTTGAGATGTCTATTTCTCTAATCGACACTGGTTCTGCATTTATTAATTAGAGCATCAGATAGTGGTTATCGAAGCTTCTGTGCAAGAACTGAAGTCAAACATCACTACCTCATTTCACATATCATATTAAACATTAAGTTGCATTTTGAATTGGACCAATTTGTGAACCATTTTTTGTTTATTATTCTCATTTTTACTGAGAGTGGACTAAAATGTTCGAAATTTTGTGTCTTTTTTTTTTTTTTTTTCCTTTTATACATTGTTTATGCATAATGCAATATATAAGCCAAAACTATAAAGATAACAATTTCATTAATGTTTTCAAAATGTTGAACCAACAACGAGGAACCAATTAACAGGAAATTGGAAATGTTTTTGAAAAAGTAAATGGGAAACATTATTAAATATATATGTTTTTTAACTAGGTCAATAAGCGCCAATGTAAATAGTAAAGAGCTTAGGGGAATGAGTTTAATTATGGTGGCTAACTATTTGAGATATGATATACTACGAATAACCTAGGCAACTATATAAAGTGGGGTCAGGTGGTTGTATTGTAAGAATAGTCAAGGTTCGTCTAGTAGTTGTTGTGAAAATAGTTAAGGTTTGTGCAAGCTAGCATGGACACTTGCAAATATTAAAGTGTGTGTTTCTTAAGAAATGAAAATGAGAAATGGCCTGAACACTTATGGATATATATATATATATATATATATAAAAGGAAAAAAAAAGAGAAACTAAAACAAAATGAATATCTTAACAATGGTCTGCCCATCAGCTTAGTTTTTGTTTCCTCTCCACCCTGTTCAACCTTCCTCATCCCTTTTTTGTTATTGGAGGTGTTTATTGGCATACATAAATTTTGCAAATGTAGTTGCCAAATGTATGAGATAAAACTTCAACCTGGAAACATCTTACTATGAGCATTTTTTGTGGCTGAATGTTATCTTTTAAATTTTGATTGTGACCCCTTTTGCTGCAGAAACGGTACGAGGACATTTCAGTTTTGGGTCAAAGACCATCAGAAGAATGA ATGGATTCTGCAGCGCGTAGGAGTGGAGGCGGCCTCTTTGAAGGGCTTTATAGAGTTATTATGCGCCGGAATTCCGTTTATGTCACCTTCATTATCGCCGGCGCTTTCGTTGGAGAGCGGGCTGTGGATTATGGAGTTCACAAGCTCTGGGAATACAACAATGTTGGGAAACGGTACGAGGACATTTCAGTTTTGGGTCAAAGACCATCAGAAGAATGA ATGGATTCTGCAGCGCGTAGGAGTGGAGGCGGCCTCTTTGAAGGGCTTTATAGAGTTATTATGCGCCGGAATTCCGTTTATGTCACCTTCATTATCGCCGGCGCTTTCGTTGGAGAGCGGGCTGTGGATTATGGAGTTCACAAGCTCTGGGAATACAACAATGTTGGGAAACGGTACGAGGACATTTCAGTTTTGGGTCAAAGACCATCAGAAGAATGA MDSAARRSGGGLFEGLYRVIMRRNSVYVTFIIAGAFVGERAVDYGVHKLWEYNNVGKRYEDISVLGQRPSEE Homology
BLAST of Lsi01G012190 vs. ExPASy Swiss-Prot
Match: Q9LXJ2 (Cytochrome b-c1 complex subunit 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=QCR9 PE=1 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 6.8e-28 Identity = 60/72 (83.33%), Postives = 64/72 (88.89%), Query Frame = 0
BLAST of Lsi01G012190 vs. ExPASy Swiss-Prot
Match: P46270 (Cytochrome b-c1 complex subunit 9 OS=Solanum tuberosum OX=4113 PE=1 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 1.3e-26 Identity = 56/72 (77.78%), Postives = 63/72 (87.50%), Query Frame = 0
BLAST of Lsi01G012190 vs. ExPASy Swiss-Prot
Match: Q7SGT7 (Cytochrome b-c1 complex subunit 9, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=qcr9 PE=1 SV=2) HSP 1 Score: 45.8 bits (107), Expect = 2.4e-04 Identity = 20/47 (42.55%), Postives = 31/47 (65.96%), Query Frame = 0
BLAST of Lsi01G012190 vs. ExPASy Swiss-Prot
Match: Q6CJX2 (Cytochrome b-c1 complex subunit 9 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=QCR9 PE=3 SV=3) HSP 1 Score: 44.7 bits (104), Expect = 5.2e-04 Identity = 21/47 (44.68%), Postives = 31/47 (65.96%), Query Frame = 0
BLAST of Lsi01G012190 vs. ExPASy TrEMBL
Match: A0A6J1I6G5 (cytochrome b-c1 complex subunit 9-like OS=Cucurbita maxima OX=3661 GN=LOC111471161 PE=3 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 2.1e-32 Identity = 71/72 (98.61%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of Lsi01G012190 vs. ExPASy TrEMBL
Match: A0A6J1HEH5 (cytochrome b-c1 complex subunit 9-like OS=Cucurbita moschata OX=3662 GN=LOC111463233 PE=3 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 6.2e-32 Identity = 70/72 (97.22%), Postives = 71/72 (98.61%), Query Frame = 0
BLAST of Lsi01G012190 vs. ExPASy TrEMBL
Match: A0A314YLX6 (Cytochrome b-c1 complex subunit 9 OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_40588 PE=3 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.1e-31 Identity = 69/72 (95.83%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of Lsi01G012190 vs. ExPASy TrEMBL
Match: A0A6J1BSW3 (cytochrome b-c1 complex subunit 9-like OS=Momordica charantia OX=3673 GN=LOC111005248 PE=3 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 1.4e-31 Identity = 70/72 (97.22%), Postives = 70/72 (97.22%), Query Frame = 0
BLAST of Lsi01G012190 vs. ExPASy TrEMBL
Match: M5WB59 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G110400 PE=3 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 1.8e-31 Identity = 68/72 (94.44%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of Lsi01G012190 vs. NCBI nr
Match: XP_022972621.1 (cytochrome b-c1 complex subunit 9-like [Cucurbita maxima] >XP_023518855.1 cytochrome b-c1 complex subunit 9-like [Cucurbita pepo subsp. pepo] >KAG6595181.1 Cytochrome b-c1 complex subunit 9, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027197.1 hypothetical protein SDJN02_11208 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 147.5 bits (371), Expect = 4.4e-32 Identity = 71/72 (98.61%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of Lsi01G012190 vs. NCBI nr
Match: XP_038881020.1 (cytochrome b-c1 complex subunit 9-like isoform X3 [Benincasa hispida]) HSP 1 Score: 146.4 bits (368), Expect = 9.8e-32 Identity = 71/72 (98.61%), Postives = 71/72 (98.61%), Query Frame = 0
BLAST of Lsi01G012190 vs. NCBI nr
Match: XP_022962866.1 (cytochrome b-c1 complex subunit 9-like [Cucurbita moschata]) HSP 1 Score: 146.0 bits (367), Expect = 1.3e-31 Identity = 70/72 (97.22%), Postives = 71/72 (98.61%), Query Frame = 0
BLAST of Lsi01G012190 vs. NCBI nr
Match: PQQ06111.1 (cytochrome b-c1 complex subunit 9 [Prunus yedoensis var. nudiflora]) HSP 1 Score: 145.2 bits (365), Expect = 2.2e-31 Identity = 69/72 (95.83%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of Lsi01G012190 vs. NCBI nr
Match: XP_022132374.1 (cytochrome b-c1 complex subunit 9-like [Momordica charantia]) HSP 1 Score: 144.8 bits (364), Expect = 2.8e-31 Identity = 70/72 (97.22%), Postives = 70/72 (97.22%), Query Frame = 0
BLAST of Lsi01G012190 vs. TAIR 10
Match: AT3G52730.1 (ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein ) HSP 1 Score: 124.0 bits (310), Expect = 4.8e-29 Identity = 60/72 (83.33%), Postives = 64/72 (88.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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