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Lsi01G011770 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTAAAATCATTGCCAAGAAATAAAATTAATTCACTCTATCAGTCATCGCCGCCGCTTTGGTCCTTCGCGCGAGAAACGGAGTTCAAGAAATGGAGTCACCAAGCAAATCGGAGAGTATTTGCAGAGACCCGATAATTGTTGAAGAGGATGATGATGATCCGCCATTGCTGAGCTCTCATGCCCTAGCTGCACTCAAGGAGTTCCTTGCCGAGCAAACCCAGCCCTCCACTGAACCTCACTTGGAAGATGGAGTTTCCGAGGACTCGGAGGTCGCTTTAGTGGCGGAGGATTGGAGGCTAAGTCAATTCTGGTACGACCGCGACACGGCGGAGACAGTGGCTAATGAGGTTCTTACGCTGTGCCAGAACTTTGATTCTCCTCGGGTGGCCTGTATTGCTTGCCCGACTCTCTACACTTATCTGAAGGTAATTGGATTGTCGTTTTCTTTTATCACATTTTGGAACTTGAATTTTCTGTTATTTGGAGGTTCTGCTTTAACTTACCTAGTTGAGGCTGGAATTTCAAGTGGGGAGCAGATAAATATACATGCCTTTAACTTTAATTATACCGATGATAAGAATTTGTTTTAGTCGCTTTATACCAAAGTAGCATGTGTTATGAACTTATGATATACCTAACATTTTGAATTTGAAACAAATATAAGTGCACAAGGAATGATTTGTTGTTTCACTTTATAGTTAAAAATTTGTTAATGTTTTATCGATGAGAAGAAAACTTCCTTCATCGAATATTAAGAGGCTGAAAGACTCTAATTGATTGGATATTGAAAGGGAAAGTTTAGAAATTTACATATCTAAAGAGGCATATCTCAAAGGAGGAAAAGAAACCTATTTACAAACTCAGGATCACTAAATTATGGCCTGAAATACTCCGATGTTTGAGCTCTGAAGACATGGCTCCAACGAACATGGTCCACTCGGCTGTAGGCTTGCCACGAAGACAGTGTAAAAAACACTTCACAGTTGCAGTAGAAGATAGCCGGGACCAAACTAAATGGAAAAGGTGCATTTTATAGGAGGCTTCCATGTATTTTCATTAACTTACTACAGGCGAGAGTCCAAAGAAGAATTTTATATTTATTTTTATCTAAAGGGCCTTGCTAGATAATTTCTCTTGGAACAGCTTCTTGATTCTCATTGCCTTTAGCATTGGTAAGATCCTTTGGACCAGTAATATTCCACCTTCTGTTATCATCTTGGCCATTCAGTTTGACGTCTTCAATGGTACACCAGAGGTTACCCCATTCTAAAACTTCTATATCATTAATGAGATTAGTCGAGGTGTGCGTAAGCTGGTTCAGACACTCACGGATAGCAAAAAAAAAAAAAAAAAAAAAGGGAAAGAGAAAGAAAAAAAGAAGAGTCCTTATGAATCTTATGTTCTTGGTATGCTCTTCATTTTGGATTTCTTTGATTATTTTGTGGTGACCATGTACTAGAGCATACAATTTGGGAAGAGACTAGAAAAGACCGATTTGATGATTATCTATGAATTTTTGATAAGATTCTCAAAACTCTCTCCTCCATCCAGGAATACGATACCTATGCAAAGCTGAAAGCTCATAACCATGTTTTCTAAGAATGATCAGTGCCACAAAATATCATGTTCCATGGGACTTCAAAGCCTTTTTAGAAATTAAGGCTGTTTTCTTTCTAAATTTTTGACAATGACAAACCGCCATAATCATTTGAAAGAGAAGCAATCTCTCAATTAATCAAGTGACTGCCACCTTCAAAGTCCAAGGCTCCAATCCCTTTCCACAAGAGTTAATGACAAACTTTCTCAATTGTCCTTGCAAATTTTGAAGGGATTTAAAACAAGGAGAGATAGTACAAGGGTGTATTTGCTGAGTGACTTGAAGCCTTGAATTAATGTAGGTTTACCATCTTTAGAGAAATAGGACATCATTTGTTACTGTTTCTCAAATCACATTGTCTTAGTCCATTCGTAGTCAACCTTGATTAGAAGCCTTTTTCTTTTGTGATCTCTCTCATTTACCACTTCAGAATTTGAGACTATTAATATTTTCTGGAAGGATTTGAGCTTTTTGCTATTTGCCTCCTAAAGTCCCAATTATTTGTAAGCATAAATTCCAATATAGAGACTATTAATTTGTTGGGGCCAGATGAGACATTGGTGATTCTTACAAGCAAACGTGTGTGATCTTTAACCATCTTGTTGAGACAGTGAATTTAGTTTAGTCTAAATCTAAAAGTGTGATAGAAGTTGGGAATATGTCATGTGGTTCAACCAGAAAGCATTCTAAATCCCGTCATGAATTCATTGTACTGCAAATTGACATAGTTTTTTATAATCTGTTTTTTCGAGTTGATTCAGAAATGTTAAGATTTTAAATTTAAATTATAAATATTCTCTAACACGATTTGATTTGATTTGATTTATTTATGATAATATCTAATTTCTGGTTGCCTGGTTTTGCACTTGTGCAGGGCACCTACCTATAATTAAGCCTTACACATTAGACTAGTCTATATGAGTTATGAATTTCTTTTGGATTGGAAATCCCGTCCTTTCTTCCAAACCAGATTGTTATTTTCTTCACCTTTTTGTTTACACCAAAAGTAATTTCTTCTATCTTTCTGTAGCCCATTTTCTTGGAGAATTAACCATCTTCTCTATTGACTAATATATTGCCTTAGTCTGATCTTCATTTGTCAGAAAATTGGTCCCCATGTATCTGCACAACTTCTTGAGTATGACAAACGCTTTTCCCAACATGGTAGTGAATTCACATTTTATGATTACAATGAACCCGAAGAATTGCCGATGGAATTGAAGCACAATTTTCAGATTTTAGTAGCAGATCCTCCTTACCTGGTGAGAGATAAAGTCCTTGTCTATGATTAGTTTTTTCACACTTTTGGATGCTTAATTTGTGAATCAGGGTTAAATATTCTTCCCGTTCACAGAATTTTCTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTTGGCAAACACCTCTATTTTTTTATTATTATCGCATCCTTGTCAGAATGCTTTACAGCAAAATCCATTTCTTTACTCTCCCAGCTTTAACTGTTCCATCTGAATATGCAAGTTGTGTGTTACAAACAATACATGAGTTTACCTCATACAAAGACTCTGAACTCATACAAACTACAGGTTTTCTACAAGACCGTAATGCATCTCCCTAGTTGATGATTCTGTATTCTGATTGTTTTGGTGCTTGGGATTATATATATATATGTGAAACAATGATTCTCTATCCAGCCATGAATAATTTGTGCTTCCTCTATCTTCCTTCTGGCAGAGCAAAGAATGTTTGGAGAAAGTAACTCGTACAATTTCTTTCCTAGCACAACATAGTGAATCCTACCTGCTATTACTAACAGGTATTGAAATGATGAATAACCCTTGTGCCAAGATTATATTTCACATTGCAATTTGCTTTTGTAACTGCAAATAAATGTTCCATCAGTTGCCTGATTACCAAGATTTCTAAGACACTGATTAGATTCGTCAATTTTATACTATTGTTTTGCTTACGATTGAACTGTGTAACACCGAAATGCAGGAGAAGTGCAAGCAGAAAGAGCAGCTGAGCTAATGGGTTTTCGTCCATGTGGTTTTAAGCCACACCACTCTAGCAAGCTCGGAAACGAGTTCCGGCTGTTCACAAACTATAATCCGGGGACGAGATTAGGAGGTTGGGAGCAATAGATTTTGGATCACTATTTGAGGCATATGGATCAGAAATTTCCCTGTGTTCCCCTGAATCTCCTCATATTTTGGTGAGAGCTCTTTGTGAACTTTTGAAAGTGGATGGATGCAAAAGCCAAGATGTAATGGATAAAATGCAATTGTTGAAGCGTGATTAAGTTAAAAGTACTGAGGAAAACAAACACTCGGTTGTATTTATAATGGAAAGATTTAAGAGCTTCATGATTTCTTTTTTTGACTCAATTCGTAGGTATACGATTGTAAGTTTTGGTGAGTCAGTAGTTGCATAATTTTGTTTGTTTTGAGAGGTTCTGACGTTTCTGCCGTCTTT CCTAAAATCATTGCCAAGAAATAAAATTAATTCACTCTATCAGTCATCGCCGCCGCTTTGGTCCTTCGCGCGAGAAACGGAGTTCAAGAAATGGAGTCACCAAGCAAATCGGAGAGTATTTGCAGAGACCCGATAATTGTTGAAGAGGATGATGATGATCCGCCATTGCTGAGCTCTCATGCCCTAGCTGCACTCAAGGAGTTCCTTGCCGAGCAAACCCAGCCCTCCACTGAACCTCACTTGGAAGATGGAGTTTCCGAGGACTCGGAGGTCGCTTTAGTGGCGGAGGATTGGAGGCTAAGTCAATTCTGGTACGACCGCGACACGGCGGAGACAGTGGCTAATGAGGTTCTTACGCTGTGCCAGAACTTTGATTCTCCTCGGGTGGCCTGTATTGCTTGCCCGACTCTCTACACTTATCTGAAGGAGGAAAAGAAACCTATTTACAAACTCAGGATCACTAAATTATGGCCTGAAATACTCCGATGTTTGAGCTCTGAAGACATGGCTCCAACGAACATGGTCCACTCGGCTGTAGGCTTGCCACGAAGACAGTGTAAAAAACACTTCACAGTTGCAGTAGAAGATAGCCGGGACCAAACTAAATGGAAAAGGGCCTTGCTAGATAATTTCTCTTGGAACAGCTTCTTGATTCTCATTGCCTTTAGCATTGGTAAGATCCTTTGGACCAGTAATATTCCACCTTCTGTTATCATCTTGGCCATTCAGTTTGACGTCTTCAATGGTACACCAGAGAAAATTGGTCCCCATGTATCTGCACAACTTCTTGAGTATGACAAACGCTTTTCCCAACATGGTAGTGAATTCACATTTTATGATTACAATGAACCCGAAGAATTGCCGATGGAATTGAAGCACAATTTTCAGATTTTAGTAGCAGATCCTCCTTACCTGAGCAAAGAATGTTTGGAGAAAGTAACTCGTACAATTTCTTTCCTAGCACAACATAGTGAATCCTACCTGCTATTACTAACAGGAGAAGTGCAAGCAGAAAGAGCAGCTGAGCTAATGGGTTTTCGTCCATGTGGTTTTAAGCCACACCACTCTAGCAAGCTCGGAAACGAGTTCCGGCTGTTCACAAACTATAATCCGGGGACGAGATTAGGAGGTTGGGAGCAATAGATTTTGGATCACTATTTGAGGCATATGGATCAGAAATTTCCCTGTGTTCCCCTGAATCTCCTCATATTTTGGTGAGAGCTCTTTGTGAACTTTTGAAAGTGGATGGATGCAAAAGCCAAGATGTAATGGATAAAATGCAATTGTTGAAGCGTGATTAAGTTAAAAGTACTGAGGAAAACAAACACTCGGTTGTATTTATAATGGAAAGATTTAAGAGCTTCATGATTTCTTTTTTTGACTCAATTCGTAGGTATACGATTGTAAGTTTTGGTGAGTCAGTAGTTGCATAATTTTGTTTGTTTTGAGAGGTTCTGACGTTTCTGCCGTCTTT ATGGAGTCACCAAGCAAATCGGAGAGTATTTGCAGAGACCCGATAATTGTTGAAGAGGATGATGATGATCCGCCATTGCTGAGCTCTCATGCCCTAGCTGCACTCAAGGAGTTCCTTGCCGAGCAAACCCAGCCCTCCACTGAACCTCACTTGGAAGATGGAGTTTCCGAGGACTCGGAGGTCGCTTTAGTGGCGGAGGATTGGAGGCTAAGTCAATTCTGGTACGACCGCGACACGGCGGAGACAGTGGCTAATGAGGTTCTTACGCTGTGCCAGAACTTTGATTCTCCTCGGGTGGCCTGTATTGCTTGCCCGACTCTCTACACTTATCTGAAGGAGGAAAAGAAACCTATTTACAAACTCAGGATCACTAAATTATGGCCTGAAATACTCCGATGTTTGAGCTCTGAAGACATGGCTCCAACGAACATGGTCCACTCGGCTGTAGGCTTGCCACGAAGACAGTGTAAAAAACACTTCACAGTTGCAGTAGAAGATAGCCGGGACCAAACTAAATGGAAAAGGGCCTTGCTAGATAATTTCTCTTGGAACAGCTTCTTGATTCTCATTGCCTTTAGCATTGGTAAGATCCTTTGGACCAGTAATATTCCACCTTCTGTTATCATCTTGGCCATTCAGTTTGACGTCTTCAATGGTACACCAGAGAAAATTGGTCCCCATGTATCTGCACAACTTCTTGAGTATGACAAACGCTTTTCCCAACATGGTAGTGAATTCACATTTTATGATTACAATGAACCCGAAGAATTGCCGATGGAATTGAAGCACAATTTTCAGATTTTAGTAGCAGATCCTCCTTACCTGAGCAAAGAATGTTTGGAGAAAGTAACTCGTACAATTTCTTTCCTAGCACAACATAGTGAATCCTACCTGCTATTACTAACAGGAGAAGTGCAAGCAGAAAGAGCAGCTGAGCTAATGGGTTTTCGTCCATGTGGTTTTAAGCCACACCACTCTAGCAAGCTCGGAAACGAGTTCCGGCTGTTCACAAACTATAATCCGGGGACGAGATTAGGAGGTTGGGAGCAATAG MESPSKSESICRDPIIVEEDDDDPPLLSSHALAALKEFLAEQTQPSTEPHLEDGVSEDSEVALVAEDWRLSQFWYDRDTAETVANEVLTLCQNFDSPRVACIACPTLYTYLKEEKKPIYKLRITKLWPEILRCLSSEDMAPTNMVHSAVGLPRRQCKKHFTVAVEDSRDQTKWKRALLDNFSWNSFLILIAFSIGKILWTSNIPPSVIILAIQFDVFNGTPEKIGPHVSAQLLEYDKRFSQHGSEFTFYDYNEPEELPMELKHNFQILVADPPYLSKECLEKVTRTISFLAQHSESYLLLLTGEVQAERAAELMGFRPCGFKPHHSSKLGNEFRLFTNYNPGTRLGGWEQ Homology
BLAST of Lsi01G011770 vs. ExPASy Swiss-Prot
Match: Q9CY45 (EEF1A lysine methyltransferase 1 OS=Mus musculus OX=10090 GN=Eef1akmt1 PE=1 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 6.7e-36 Identity = 105/326 (32.21%), Postives = 143/326 (43.87%), Query Frame = 0
BLAST of Lsi01G011770 vs. ExPASy Swiss-Prot
Match: Q8WVE0 (EEF1A lysine methyltransferase 1 OS=Homo sapiens OX=9606 GN=EEF1AKMT1 PE=1 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 1.1e-35 Identity = 96/328 (29.27%), Postives = 144/328 (43.90%), Query Frame = 0
BLAST of Lsi01G011770 vs. ExPASy Swiss-Prot
Match: Q5ZKT6 (EEF1A lysine methyltransferase 1 OS=Gallus gallus OX=9031 GN=EEF1AKMT1 PE=2 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 1.8e-33 Identity = 102/327 (31.19%), Postives = 137/327 (41.90%), Query Frame = 0
BLAST of Lsi01G011770 vs. ExPASy Swiss-Prot
Match: Q6GN98 (EEF1A lysine methyltransferase 1 OS=Xenopus laevis OX=8355 GN=eef1akmt1 PE=2 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.5e-32 Identity = 101/322 (31.37%), Postives = 138/322 (42.86%), Query Frame = 0
BLAST of Lsi01G011770 vs. ExPASy Swiss-Prot
Match: Q17QF2 (EEF1A lysine methyltransferase 1 OS=Bos taurus OX=9913 GN=EEF1AKMT1 PE=2 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 4.9e-31 Identity = 93/327 (28.44%), Postives = 138/327 (42.20%), Query Frame = 0
BLAST of Lsi01G011770 vs. ExPASy TrEMBL
Match: A0A0A0KHM5 (Protein-lysine N-methyltransferase Csa_6G476640 OS=Cucumis sativus OX=3659 GN=Csa_6G476640 PE=3 SV=1) HSP 1 Score: 420.6 bits (1080), Expect = 6.3e-114 Identity = 228/352 (64.77%), Postives = 235/352 (66.76%), Query Frame = 0
BLAST of Lsi01G011770 vs. ExPASy TrEMBL
Match: A0A5D3C6D8 (Protein-lysine N-methyltransferase E5676_scaffold202G001880 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001880 PE=3 SV=1) HSP 1 Score: 413.7 bits (1062), Expect = 7.7e-112 Identity = 224/352 (63.64%), Postives = 232/352 (65.91%), Query Frame = 0
BLAST of Lsi01G011770 vs. ExPASy TrEMBL
Match: A0A1S3CHE6 (Protein-lysine N-methyltransferase LOC103500945 OS=Cucumis melo OX=3656 GN=LOC103500945 PE=3 SV=1) HSP 1 Score: 413.7 bits (1062), Expect = 7.7e-112 Identity = 224/352 (63.64%), Postives = 232/352 (65.91%), Query Frame = 0
BLAST of Lsi01G011770 vs. ExPASy TrEMBL
Match: A0A6J1BT81 (Protein-lysine N-methyltransferase LOC111005552 OS=Momordica charantia OX=3673 GN=LOC111005552 PE=3 SV=1) HSP 1 Score: 388.3 bits (996), Expect = 3.5e-104 Identity = 210/350 (60.00%), Postives = 227/350 (64.86%), Query Frame = 0
BLAST of Lsi01G011770 vs. ExPASy TrEMBL
Match: A0A6J1ILR2 (Protein-lysine N-methyltransferase LOC111477605 OS=Cucurbita maxima OX=3661 GN=LOC111477605 PE=3 SV=1) HSP 1 Score: 387.9 bits (995), Expect = 4.5e-104 Identity = 209/350 (59.71%), Postives = 223/350 (63.71%), Query Frame = 0
BLAST of Lsi01G011770 vs. NCBI nr
Match: XP_038880976.1 (EEF1A lysine methyltransferase 1 [Benincasa hispida]) HSP 1 Score: 427.6 bits (1098), Expect = 1.1e-115 Identity = 231/351 (65.81%), Postives = 236/351 (67.24%), Query Frame = 0
BLAST of Lsi01G011770 vs. NCBI nr
Match: XP_004143344.1 (EEF1A lysine methyltransferase 1 [Cucumis sativus] >KGN48324.1 hypothetical protein Csa_003182 [Cucumis sativus]) HSP 1 Score: 420.6 bits (1080), Expect = 1.3e-113 Identity = 228/352 (64.77%), Postives = 235/352 (66.76%), Query Frame = 0
BLAST of Lsi01G011770 vs. NCBI nr
Match: XP_008462634.1 (PREDICTED: protein-lysine N-methyltransferase N6AMT2 [Cucumis melo] >KAA0025209.1 protein-lysine N-methyltransferase N6AMT2 [Cucumis melo var. makuwa] >TYK07457.1 protein-lysine N-methyltransferase N6AMT2 [Cucumis melo var. makuwa]) HSP 1 Score: 413.7 bits (1062), Expect = 1.6e-111 Identity = 224/352 (63.64%), Postives = 232/352 (65.91%), Query Frame = 0
BLAST of Lsi01G011770 vs. NCBI nr
Match: KAG6604311.1 (EEF1A lysine methyltransferase 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034465.1 EEF1A lysine methyltransferase 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 395.2 bits (1014), Expect = 5.9e-106 Identity = 214/351 (60.97%), Postives = 226/351 (64.39%), Query Frame = 0
BLAST of Lsi01G011770 vs. NCBI nr
Match: XP_023543174.1 (EEF1A lysine methyltransferase 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 389.4 bits (999), Expect = 3.2e-104 Identity = 209/350 (59.71%), Postives = 224/350 (64.00%), Query Frame = 0
BLAST of Lsi01G011770 vs. TAIR 10
Match: AT3G58470.1 (nucleic acid binding;methyltransferases ) HSP 1 Score: 255.4 bits (651), Expect = 6.8e-68 Identity = 152/334 (45.51%), Postives = 177/334 (52.99%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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