Lsi01G011300 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G011300
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Actin
Location	chr01: 9427824 .. 9430512 (-)
RNA-Seq Expression	Lsi01G011300
Synteny	Lsi01G011300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAAGGCTGTCAGCCAGGTCACCCTATCTTTTCTCGTGGTCGAAATGATTCCTTCAATTCCCTCTCCAAATTCTTCATTTCCTCCGAATTTGCATTTGCATTTGCATTTCCCGCATTTCCCTTCTTTTCTTCTCTCTCTCTCTCTCTATTTATAAACCCCATCTCCTTGCTTTCCTCTTCCTCTTATTCCCGTCTTTCAAACTCACCTAGGTCGACAACACTCACTGCTCTCAGCCACACCTTCTTCTTTGGAGGTTGGCTTCTTCTTCTTCTTCATTCATTCCCTTCTCTTTAATCCAAGGTTTGTTTCATCTCCTTTTACTTCTTTCTTCCCACTTTGCTATCAATTTTGATCTGGGGTTTTCGTTTTTTAGCCAAATTATGCTTTTTTCGTCTCTCATTTCTTTACTTTATTGCTTTAACTCATTTTCTCCTGATGGGGTTCTTCAATTTTTGCCGATCTTACTGTTTTTTTCGGAATTCTGTTTCAATCGGCGTGGATCCGTGGTGTTTGTCTTAATAATGAACCTAGATTCTTTCTCTTTGTTGGCTGAGATCTGAAATTTTCCATTTGGGTTTTGACTGTTTGTGCTTACGAAACTGAGATCTAGGATTTGATGATGTCTAGCTTTTGATTTCTGCATGCAATTCTGTAATCGTGCATAACTGGATGGCTTTCTGGTGATTACTGCATGTTTTTGTTTATTTCTGAAGTGTGTTGGGTTTTTCGTTGTCTGATCTGTTCTTTTTATGCTTCTTTTTTGTTCTGTTGTTCTGGTTCATGTTAGGGAGGATTTAGTTGCTTTGTTCTCTGCTTTTGTGTTATATTATCTCTTAGATCAGTTTTGGTAGCTTCTCGATCTGAAGATGTTTATGAATTAGAGTTTATGGTAAGCTTGTGTTCTTGCATTATACAAAAATTGGGACTTTAATTCTTTTCGTTTGTAAGATCTTCTTTAACATATTTGATTACCGGTTAGATTTTTTGTGTCTCGACTCTTTTGATTGTTCTAAGTAGTATATTGATTCCTCCTGTATTATTTGTGAATCTGGAAGGTCAATTATATCAAGTAAATTTATGGATTGTAAATGGATGTCTTAAGAGATGTTCAAGACATGAATTCTAGATTGCTATGTGTGGTTTGTTTATTCAACTTCTATTTTTATATTGCTTTGTGCAGTTTTTGAAAAAAAATGGCTGACGCCGAGGATATTCAGCCACTTGTCTGTGACAATGGAACTGGAATGGTGAAGGTCAGTTTCTAGGTTTTTTTATATTGTGTGCTGGTTGTGTTTTTTTCCCAAGGAATTTCAGTTCTTTTCATAATGGTGAAAATTATCTTTATCCTCCTAATTTAATGTCATACTTTATGATGGTGTAGGCTGGCTTTGCTGGTGATGATGCTCCTAGGGCAGTTTTCCCCAGTATTGTTGGTCGACCCCGACATACCGGTGTCATGGTTGGTATGGGGCAAAAAGATGCCTATGTTGGGGATGAAGCTCAGTCTAAAAGAGGTATCCTTACCTTGAAATATCCCATTGAACATGGTATAGTCAGTAACTGGGATGACATGGAAAAGATTTGGCATCACACATTCTACAACGAGCTTCGTGTTGCTCCCGAAGAGCACCCTGTGCTTCTGACTGAGGCTCCACTCAACCCAAAGGCTAACAGAGAAAAGATGACTCAAATCATGTTTGAGACATTCAATGTGCCTGCTATGTACGTTGCCATCCAGGCTGTTCTGTCCCTCTATGCTAGTGGACGTACCACTGGTATGTATATGTATTCTATTTGAACGACAATGTTGTAATTTTGAACTTATATAATTTGGTATTGATGAAAACCTACTTTGGACAGGTATCGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTTCCCATCTATGAGGGTTATGCTCTCCCTCATGCCATTCTTCGTTTGGACCTTGCTGGTCGTGACCTTACTGATGCTCTCATGAAGATTCTCACTGAAAGAGGTTACATGTTCACCACCACTGCTGAACGGGAAATTGTCCGTGACATGAAGGAGAAGCTGGCATATGTTGCTCTTGACTACGAACAAGAACTCGAGACTGCAAAGAGCAGTTCCTCTATTGAGAAGAACTACGAACTTCCTGATGGACAGGTCATCACCATTGGAGCTGAGAGATTCCGTTGCCCAGAAGTTTTATTCCAGCCATCTCTCATCGGTATGGAAGCTGCAGGAATCCACGAAACTACCTACAACTCCATCATGAAGTGTGACGTAGATATCAGAAAGGACCTTTACGGAAACATCGTCCTCAGTGGTGGTTCAACCATGTTCCCTGGCATTGCAGACAGGATGAGCAAGGAAATCACAGCCCTCGCTCCCAGCAGCATGAAGATTAAGGTTGTTGCACCACCCGAAAGGAAATACAGTGTCTGGATTGGAGGGTCTATTCTTGCATCTCTAAGTACCTTCCAGCAGGTAAATCTTCCATTCCAATTTCCACATAGTATTTTGCTGTAGTTGTTAATCCAATTGACAAATGACACTCATCCATTCCATTTTGTTGTATCAGATGTGGATCTCAAAGGGTGAATATGACGAATCTGGCCCATCCATTGTCCACAGGAAGTGCTTCTAAGCTGTGTCAATTTCTTTGATGATGATGATGATGATGATGATGATGATGATGAT

mRNA sequence

GGAAAGGCTGTCAGCCAGGTCACCCTATCTTTTCTCGTGGTCGAAATGATTCCTTCAATTCCCTCTCCAAATTCTTCATTTCCTCCGAATTTGCATTTGCATTTGCATTTCCCGCATTTCCCTTCTTTTCTTCTCTCTCTCTCTCTCTATTTATAAACCCCATCTCCTTGCTTTCCTCTTCCTCTTATTCCCGTCTTTCAAACTCACCTAGGTCGACAACACTCACTGCTCTCAGCCACACCTTCTTCTTTGGAGGTTGGCTTCTTCTTCTTCTTCATTCATTCCCTTCTCTTTAATCCAAGTTTTTGAAAAAAAATGGCTGACGCCGAGGATATTCAGCCACTTGTCTGTGACAATGGAACTGGAATGGTGAAGGCTGGCTTTGCTGGTGATGATGCTCCTAGGGCAGTTTTCCCCAGTATTGTTGGTCGACCCCGACATACCGGTGTCATGGTTGGTATGGGGCAAAAAGATGCCTATGTTGGGGATGAAGCTCAGTCTAAAAGAGGTATCCTTACCTTGAAATATCCCATTGAACATGGTATAGTCAGTAACTGGGATGACATGGAAAAGATTTGGCATCACACATTCTACAACGAGCTTCGTGTTGCTCCCGAAGAGCACCCTGTGCTTCTGACTGAGGCTCCACTCAACCCAAAGGCTAACAGAGAAAAGATGACTCAAATCATGTTTGAGACATTCAATGTGCCTGCTATGTACGTTGCCATCCAGGCTGTTCTGTCCCTCTATGCTAGTGGACGTACCACTGGTATCGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTTCCCATCTATGAGGGTTATGCTCTCCCTCATGCCATTCTTCGTTTGGACCTTGCTGGTCGTGACCTTACTGATGCTCTCATGAAGATTCTCACTGAAAGAGGTTACATGTTCACCACCACTGCTGAACGGGAAATTGTCCGTGACATGAAGGAGAAGCTGGCATATGTTGCTCTTGACTACGAACAAGAACTCGAGACTGCAAAGAGCAGTTCCTCTATTGAGAAGAACTACGAACTTCCTGATGGACAGGTCATCACCATTGGAGCTGAGAGATTCCGTTGCCCAGAAGTTTTATTCCAGCCATCTCTCATCGGTATGGAAGCTGCAGGAATCCACGAAACTACCTACAACTCCATCATGAAGTGTGACGTAGATATCAGAAAGGACCTTTACGGAAACATCGTCCTCAGTGGTGGTTCAACCATGTTCCCTGGCATTGCAGACAGGATGAGCAAGGAAATCACAGCCCTCGCTCCCAGCAGCATGAAGATTAAGGTTGTTGCACCACCCGAAAGGAAATACAGTGTCTGGATTGGAGGGTCTATTCTTGCATCTCTAAGTACCTTCCAGCAGGAAGTGCTTCTAAGCTGTGTCAATTTCTTTGATGATGATGATGATGATGATGATGATGATGATGAT

Coding sequence (CDS)

ATGGCTGACGCCGAGGATATTCAGCCACTTGTCTGTGACAATGGAACTGGAATGGTGAAGGCTGGCTTTGCTGGTGATGATGCTCCTAGGGCAGTTTTCCCCAGTATTGTTGGTCGACCCCGACATACCGGTGTCATGGTTGGTATGGGGCAAAAAGATGCCTATGTTGGGGATGAAGCTCAGTCTAAAAGAGGTATCCTTACCTTGAAATATCCCATTGAACATGGTATAGTCAGTAACTGGGATGACATGGAAAAGATTTGGCATCACACATTCTACAACGAGCTTCGTGTTGCTCCCGAAGAGCACCCTGTGCTTCTGACTGAGGCTCCACTCAACCCAAAGGCTAACAGAGAAAAGATGACTCAAATCATGTTTGAGACATTCAATGTGCCTGCTATGTACGTTGCCATCCAGGCTGTTCTGTCCCTCTATGCTAGTGGACGTACCACTGGTATCGTGCTGGATTCTGGTGATGGTGTGAGTCACACTGTTCCCATCTATGAGGGTTATGCTCTCCCTCATGCCATTCTTCGTTTGGACCTTGCTGGTCGTGACCTTACTGATGCTCTCATGAAGATTCTCACTGAAAGAGGTTACATGTTCACCACCACTGCTGAACGGGAAATTGTCCGTGACATGAAGGAGAAGCTGGCATATGTTGCTCTTGACTACGAACAAGAACTCGAGACTGCAAAGAGCAGTTCCTCTATTGAGAAGAACTACGAACTTCCTGATGGACAGGTCATCACCATTGGAGCTGAGAGATTCCGTTGCCCAGAAGTTTTATTCCAGCCATCTCTCATCGGTATGGAAGCTGCAGGAATCCACGAAACTACCTACAACTCCATCATGAAGTGTGACGTAGATATCAGAAAGGACCTTTACGGAAACATCGTCCTCAGTGGTGGTTCAACCATGTTCCCTGGCATTGCAGACAGGATGAGCAAGGAAATCACAGCCCTCGCTCCCAGCAGCATGAAGATTAAGGTTGTTGCACCACCCGAAAGGAAATACAGTGTCTGGATTGGAGGGTCTATTCTTGCATCTCTAAGTACCTTCCAGCAGGAAGTGCTTCTAAGCTGTGTCAATTTCTTTGATGATGATGATGATGATGATGATGATGATGATGAT

Protein sequence

MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQEVLLSCVNFFDDDDDDDDDDDD

Homology

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BLAST of Lsi01G011300 vs. ExPASy Swiss-Prot
Match: P53492 (Actin-7 OS=Arabidopsis thaliana OX=3702 GN=ACT7 PE=1 SV=1)

HSP 1 Score: 709.5 bits (1830), Expect = 2.0e-203
Identity = 351/356 (98.60%), Postives = 354/356 (99.44%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSIEK 240
           DLAGRDLTD+LMKILTERGYMFTTTAEREIVRD+KEKLAYVALDYEQELETAKSSSS+EK
Sbjct: 181 DLAGRDLTDSLMKILTERGYMFTTTAEREIVRDIKEKLAYVALDYEQELETAKSSSSVEK 240

Query: 241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           NYELPDGQVITIGAERFRCPEVLFQPSLIGMEA GIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 357
           LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 356

[Close]

BLAST of Lsi01G011300 vs. ExPASy Swiss-Prot
Match: P30173 (Actin-101 OS=Solanum tuberosum OX=4113 GN=AC101 PE=3 SV=1)

HSP 1 Score: 702.2 bits (1811), Expect = 3.2e-201
Identity = 345/356 (96.91%), Postives = 354/356 (99.44%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADAEDI+PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIEPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRV+P+EHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVSPDEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSIEK 240
           DLAGRDLTD LMKILTERGY FTT+AEREIVRDMKEKLAYVALDYEQELETAKSSS++EK
Sbjct: 181 DLAGRDLTDCLMKILTERGYSFTTSAEREIVRDMKEKLAYVALDYEQELETAKSSSAVEK 240

Query: 241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           +YELPDGQVITIGAERFRCPEVLFQPSL+GMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 357
           LSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ
Sbjct: 301 LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 356

[Close]

BLAST of Lsi01G011300 vs. ExPASy Swiss-Prot
Match: P0C539 (Actin-2 OS=Oryza sativa subsp. indica OX=39946 GN=ACT2 PE=3 SV=1)

HSP 1 Score: 702.2 bits (1811), Expect = 3.2e-201
Identity = 346/356 (97.19%), Postives = 354/356 (99.44%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETF+VPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFSVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSIEK 240
           DLAGRDLTD+LMKILTERGY FTT+AEREIVRD+KEKLAYVALDYEQELETAKSSSS+EK
Sbjct: 181 DLAGRDLTDSLMKILTERGYSFTTSAEREIVRDIKEKLAYVALDYEQELETAKSSSSVEK 240

Query: 241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           +YELPDGQVITIGAERFRCPEV+FQPSLIGMEA GIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVMFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 357
           LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 356

[Close]

BLAST of Lsi01G011300 vs. ExPASy Swiss-Prot
Match: A3C6D7 (Actin-2 OS=Oryza sativa subsp. japonica OX=39947 GN=ACT2 PE=2 SV=1)

HSP 1 Score: 702.2 bits (1811), Expect = 3.2e-201
Identity = 346/356 (97.19%), Postives = 354/356 (99.44%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETF+VPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFSVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSIEK 240
           DLAGRDLTD+LMKILTERGY FTT+AEREIVRD+KEKLAYVALDYEQELETAKSSSS+EK
Sbjct: 181 DLAGRDLTDSLMKILTERGYSFTTSAEREIVRDIKEKLAYVALDYEQELETAKSSSSVEK 240

Query: 241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           +YELPDGQVITIGAERFRCPEV+FQPSLIGMEA GIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVMFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 357
           LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 356

[Close]

BLAST of Lsi01G011300 vs. ExPASy Swiss-Prot
Match: O81221 (Actin OS=Gossypium hirsutum OX=3635 PE=3 SV=1)

HSP 1 Score: 701.4 bits (1809), Expect = 5.4e-201
Identity = 345/356 (96.91%), Postives = 353/356 (99.16%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSIEK 240
           DLAGRDLTDALMKILTERGY FTTTAEREIVRD+KEKLAY+ALDYEQELET+K+SSSIEK
Sbjct: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDVKEKLAYIALDYEQELETSKTSSSIEK 240

Query: 241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           +YELPDGQVITIGAERFRCPEVLFQPS+IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 357
           LSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ
Sbjct: 301 LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 356

[Close]

BLAST of Lsi01G011300 vs. ExPASy TrEMBL
Match: A0A6A4KQ81 (Uncharacterized protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_18325 PE=3 SV=1)

HSP 1 Score: 718.8 bits (1854), Expect = 1.2e-203
Identity = 357/362 (98.62%), Postives = 358/362 (98.90%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSIEK 240
           DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSS+EK
Sbjct: 181 DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEK 240

Query: 241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQEVLL 360
           LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ  L 
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVTLH 360

Query: 361 SC 363
            C
Sbjct: 361 LC 362

[Close]

BLAST of Lsi01G011300 vs. ExPASy TrEMBL
Match: A0A445L3H0 (Actin-7 isoform E OS=Glycine soja OX=3848 GN=D0Y65_010433 PE=3 SV=1)

HSP 1 Score: 717.6 bits (1851), Expect = 2.7e-203
Identity = 354/365 (96.99%), Postives = 361/365 (98.90%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSIEK 240
           DLAGRDLTD+LMKILTERGYMFTT+AEREIVRDMKEKLAYVALDYEQELETAKSSSS+EK
Sbjct: 181 DLAGRDLTDSLMKILTERGYMFTTSAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEK 240

Query: 241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           NYELPDGQVITIGAERFRCPEVLFQPS+IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 NYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQEVLL 360
           LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ ++L
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVIVL 360

Query: 361 SCVNF 366
              N+
Sbjct: 361 FIANY 365

[Close]

BLAST of Lsi01G011300 vs. ExPASy TrEMBL
Match: A0A6J1KSB9 (actin-7 OS=Cucurbita maxima OX=3661 GN=LOC111496813 PE=3 SV=1)

HSP 1 Score: 716.1 bits (1847), Expect = 7.9e-203
Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSIEK 240
           DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSIEK
Sbjct: 181 DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSIEK 240

Query: 241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 357
           LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 356

[Close]

BLAST of Lsi01G011300 vs. ExPASy TrEMBL
Match: A0A0A0KJ21 (Actin OS=Cucumis sativus OX=3659 GN=Csa_2G301530 PE=3 SV=1)

HSP 1 Score: 716.1 bits (1847), Expect = 7.9e-203
Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSIEK 240
           DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSIEK
Sbjct: 181 DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSIEK 240

Query: 241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 357
           LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 356

[Close]

BLAST of Lsi01G011300 vs. ExPASy TrEMBL
Match: A0A1S3B379 (actin-7 OS=Cucumis melo OX=3656 GN=LOC103485254 PE=3 SV=1)

HSP 1 Score: 716.1 bits (1847), Expect = 7.9e-203
Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSIEK 240
           DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSIEK
Sbjct: 181 DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSIEK 240

Query: 241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 357
           LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 356

[Close]

BLAST of Lsi01G011300 vs. NCBI nr
Match: KAE9449776.1 (hypothetical protein C3L33_18325, partial [Rhododendron williamsianum])

HSP 1 Score: 718.8 bits (1854), Expect = 2.5e-203
Identity = 357/362 (98.62%), Postives = 358/362 (98.90%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSIEK 240
           DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSS+EK
Sbjct: 181 DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEK 240

Query: 241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQEVLL 360
           LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ  L 
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVTLH 360

Query: 361 SC 363
            C
Sbjct: 361 LC 362

[Close]

BLAST of Lsi01G011300 vs. NCBI nr
Match: KAF7130171.1 (hypothetical protein RHSIM_Rhsim10G0141400 [Rhododendron simsii])

HSP 1 Score: 718.8 bits (1854), Expect = 2.5e-203
Identity = 357/362 (98.62%), Postives = 358/362 (98.90%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 44  MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 103

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 104 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 163

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 164 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 223

Query: 181 DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSIEK 240
           DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSS+EK
Sbjct: 224 DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEK 283

Query: 241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 284 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 343

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQEVLL 360
           LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ  L 
Sbjct: 344 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVTLH 403

Query: 361 SC 363
            C
Sbjct: 404 LC 405

[Close]

BLAST of Lsi01G011300 vs. NCBI nr
Match: RZC17686.1 (Actin-7 isoform E [Glycine soja])

HSP 1 Score: 717.6 bits (1851), Expect = 5.6e-203
Identity = 354/365 (96.99%), Postives = 361/365 (98.90%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSIEK 240
           DLAGRDLTD+LMKILTERGYMFTT+AEREIVRDMKEKLAYVALDYEQELETAKSSSS+EK
Sbjct: 181 DLAGRDLTDSLMKILTERGYMFTTSAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEK 240

Query: 241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           NYELPDGQVITIGAERFRCPEVLFQPS+IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 NYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQEVLL 360
           LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ ++L
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVIVL 360

Query: 361 SCVNF 366
              N+
Sbjct: 361 FIANY 365

[Close]

BLAST of Lsi01G011300 vs. NCBI nr
Match: XP_004147353.1 (actin-7 [Cucumis sativus] >XP_008441013.1 PREDICTED: actin-7 [Cucumis melo] >XP_008460911.1 PREDICTED: actin-7 [Cucumis melo] >XP_011657767.1 actin-7 [Cucumis sativus] >XP_022132857.1 actin-7 [Momordica charantia] >XP_022158718.1 actin-7 [Momordica charantia] >XP_022927998.1 actin-7 [Cucurbita moschata] >XP_022947191.1 actin-7 [Cucurbita moschata] >XP_022949630.1 actin-7 [Cucurbita moschata] >XP_022962909.1 actin-7 [Cucurbita moschata] >XP_022971631.1 actin-7 [Cucurbita maxima] >XP_022971632.1 actin-7 [Cucurbita maxima] >XP_022977459.1 actin-7 [Cucurbita maxima] >XP_023003099.1 actin-7 [Cucurbita maxima] >XP_023007193.1 actin-7 [Cucurbita maxima] >XP_023512359.1 actin-7 [Cucurbita pepo subsp. pepo] >XP_023517580.1 actin-7 [Cucurbita pepo subsp. pepo] >XP_023543696.1 actin-7 [Cucurbita pepo subsp. pepo] >XP_038881675.1 actin-7 [Benincasa hispida] >XP_038901999.1 actin-7 [Benincasa hispida] >ATQ36707.1 actin [Citrullus lanatus] >KAA0025548.1 Actin 7 isoform 1 [Cucumis melo var. makuwa] >KAG7011130.1 Actin-7, partial [Cucurbita argyrosperma subsp. argyrosperma] >KAA0040779.1 Actin 7 isoform 1 [Cucumis melo var. makuwa] >KAG7027129.1 Actin-7 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 716.1 bits (1847), Expect = 1.6e-202
Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSIEK 240
           DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSIEK
Sbjct: 181 DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSIEK 240

Query: 241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 357
           LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 356

[Close]

BLAST of Lsi01G011300 vs. NCBI nr
Match: OMO55847.1 (hypothetical protein CCACVL1_26963 [Corchorus capsularis])

HSP 1 Score: 715.7 bits (1846), Expect = 2.1e-202
Identity = 355/356 (99.72%), Postives = 356/356 (100.00%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSIEK 240
           DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSS+EK
Sbjct: 181 DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEK 240

Query: 241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 357
           LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 356

[Close]

BLAST of Lsi01G011300 vs. TAIR 10
Match: AT5G09810.1 (actin 7 )

HSP 1 Score: 709.5 bits (1830), Expect = 1.4e-204
Identity = 351/356 (98.60%), Postives = 354/356 (99.44%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSIEK 240
           DLAGRDLTD+LMKILTERGYMFTTTAEREIVRD+KEKLAYVALDYEQELETAKSSSS+EK
Sbjct: 181 DLAGRDLTDSLMKILTERGYMFTTTAEREIVRDIKEKLAYVALDYEQELETAKSSSSVEK 240

Query: 241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           NYELPDGQVITIGAERFRCPEVLFQPSLIGMEA GIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 357
           LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 356

[Close]

BLAST of Lsi01G011300 vs. TAIR 10
Match: AT2G37620.1 (actin 1 )

HSP 1 Score: 697.6 bits (1799), Expect = 5.6e-201
Identity = 341/356 (95.79%), Postives = 351/356 (98.60%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSIEK 240
           DLAGRDLTDALMKILTERGY FTTTAEREIVRD+KEKL Y+ALDYEQELETAK+SSS+EK
Sbjct: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLCYIALDYEQELETAKTSSSVEK 240

Query: 241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           NYELPDGQVITIG+ERFRCPEVL+QPS+IGME AGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 NYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 357
           LSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ
Sbjct: 301 LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 356

[Close]

BLAST of Lsi01G011300 vs. TAIR 10
Match: AT2G37620.2 (actin 1 )

HSP 1 Score: 697.6 bits (1799), Expect = 5.6e-201
Identity = 341/356 (95.79%), Postives = 351/356 (98.60%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSIEK 240
           DLAGRDLTDALMKILTERGY FTTTAEREIVRD+KEKL Y+ALDYEQELETAK+SSS+EK
Sbjct: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLCYIALDYEQELETAKTSSSVEK 240

Query: 241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           NYELPDGQVITIG+ERFRCPEVL+QPS+IGME AGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 NYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 357
           LSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ
Sbjct: 301 LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 356

[Close]

BLAST of Lsi01G011300 vs. TAIR 10
Match: AT3G53750.1 (actin 3 )

HSP 1 Score: 697.6 bits (1799), Expect = 5.6e-201
Identity = 341/356 (95.79%), Postives = 351/356 (98.60%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSIEK 240
           DLAGRDLTDALMKILTERGY FTTTAEREIVRD+KEKL Y+ALDYEQELETAK+SSS+EK
Sbjct: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLCYIALDYEQELETAKTSSSVEK 240

Query: 241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           NYELPDGQVITIG+ERFRCPEVL+QPS+IGME AGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 NYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 357
           LSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ
Sbjct: 301 LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 356

[Close]

BLAST of Lsi01G011300 vs. TAIR 10
Match: AT3G12110.1 (actin-11 )

HSP 1 Score: 695.7 bits (1794), Expect = 2.1e-200
Identity = 341/356 (95.79%), Postives = 350/356 (98.31%), Query Frame = 0


Query: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSIEK 240
           DLAGRDLTD LMKILTERGY FTT+AEREIVRD+KEKLAY+ALDYEQE+ETA +SSS+EK
Sbjct: 181 DLAGRDLTDYLMKILTERGYSFTTSAEREIVRDVKEKLAYIALDYEQEMETANTSSSVEK 240

Query: 241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           +YELPDGQVITIG ERFRCPEVLFQPSL+GMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGGERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 357
           LSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ
Sbjct: 301 LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 356

The following BLAST results are available for this feature:

BLAST of Lsi01G011300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P53492	2.0e-203	98.60	Actin-7 OS=Arabidopsis thaliana OX=3702 GN=ACT7 PE=1 SV=1	[more]
P30173	3.2e-201	96.91	Actin-101 OS=Solanum tuberosum OX=4113 GN=AC101 PE=3 SV=1	[more]
P0C539	3.2e-201	97.19	Actin-2 OS=Oryza sativa subsp. indica OX=39946 GN=ACT2 PE=3 SV=1	[more]
A3C6D7	3.2e-201	97.19	Actin-2 OS=Oryza sativa subsp. japonica OX=39947 GN=ACT2 PE=2 SV=1	[more]
O81221	5.4e-201	96.91	Actin OS=Gossypium hirsutum OX=3635 PE=3 SV=1	[more]

BLAST of Lsi01G011300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6A4KQ81	1.2e-203	98.62	Uncharacterized protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3...	[more]
A0A445L3H0	2.7e-203	96.99	Actin-7 isoform E OS=Glycine soja OX=3848 GN=D0Y65_010433 PE=3 SV=1	[more]
A0A6J1KSB9	7.9e-203	100.00	actin-7 OS=Cucurbita maxima OX=3661 GN=LOC111496813 PE=3 SV=1	[more]
A0A0A0KJ21	7.9e-203	100.00	Actin OS=Cucumis sativus OX=3659 GN=Csa_2G301530 PE=3 SV=1	[more]
A0A1S3B379	7.9e-203	100.00	actin-7 OS=Cucumis melo OX=3656 GN=LOC103485254 PE=3 SV=1	[more]

BLAST of Lsi01G011300 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE9449776.1	2.5e-203	98.62	hypothetical protein C3L33_18325, partial [Rhododendron williamsianum]	[more]
KAF7130171.1	2.5e-203	98.62	hypothetical protein RHSIM_Rhsim10G0141400 [Rhododendron simsii]	[more]
RZC17686.1	5.6e-203	96.99	Actin-7 isoform E [Glycine soja]	[more]
XP_004147353.1	1.6e-202	100.00	actin-7 [Cucumis sativus] >XP_008441013.1 PREDICTED: actin-7 [Cucumis melo] >XP_...	[more]
OMO55847.1	2.1e-202	99.72	hypothetical protein CCACVL1_26963 [Corchorus capsularis]	[more]

BLAST of Lsi01G011300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G09810.1	1.4e-204	98.60	actin 7	[more]
AT2G37620.1	5.6e-201	95.79	actin 1	[more]
AT2G37620.2	5.6e-201	95.79	actin 1	[more]
AT3G53750.1	5.6e-201	95.79	actin 3	[more]
AT3G12110.1	2.1e-200	95.79	actin-11	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004000	Actin family	PRINTS	PR00190	ACTIN	coord: 63..85 score: 92.06 coord: 142..161 score: 96.3 coord: 117..130 score: 97.31 coord: 28..37 score: 96.55 coord: 238..254 score: 80.45 coord: 51..62 score: 89.2
IPR004000	Actin family	SMART	SM00268	actin_3	coord: 7..368 e-value: 2.8E-213 score: 724.5
IPR004000	Actin family	PFAM	PF00022	Actin	coord: 5..357 e-value: 5.1E-134 score: 446.8
IPR004000	Actin family	PANTHER	PTHR11937	ACTIN	coord: 1..360
None	No IPR available	GENE3D	3.30.420.40		coord: 140..340 e-value: 9.7E-176 score: 585.6
None	No IPR available	GENE3D	3.90.640.10	Actin; Chain A, domain 4	coord: 182..273 e-value: 9.7E-176 score: 585.6
None	No IPR available	GENE3D	3.30.420.40		coord: 10..357 e-value: 9.7E-176 score: 585.6
None	No IPR available	PANTHER	PTHR11937:SF394	ACTIN	coord: 1..360
None	No IPR available	CDD	cd00012	NBD_sugar-kinase_HSP70_actin	coord: 10..183 e-value: 5.7747E-18 score: 79.1699
IPR020902	Actin/actin-like conserved site	PROSITE	PS01132	ACTINS_ACT_LIKE	coord: 106..118
IPR004001	Actin, conserved site	PROSITE	PS00406	ACTINS_1	coord: 55..65
IPR043129	ATPase, nucleotide binding domain	SUPERFAMILY	53067	Actin-like ATPase domain	coord: 149..356
IPR043129	ATPase, nucleotide binding domain	SUPERFAMILY	53067	Actin-like ATPase domain	coord: 6..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G011300.1	Lsi01G011300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005856	cytoskeleton
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004386	helicase activity