Lsi01G010910 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G010910
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	NADH dehydrogenase subunit 7
Location	chr01: 9002183 .. 9002647 (+)
RNA-Seq Expression	Lsi01G010910
Synteny	Lsi01G010910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCAAGAACACGCTCATTCTTCAGCTGTAGAGAGACTTTTGAATTGCGAGGTACCATTACGAGCTCAATATATACGAGTGTTATTCCGTGAAATAACTCGAATTTCAAATCATTCACTTGCTTTAACTACTCATGCTATGGATGTGGGAGCATCAACTCCGTTCCTGTGGGCTTTTGAGGAGCGGGAGAAATTATTGGAATTCTATGAAAGAGTCTCGGGAGCCAGGATGCATGCCAGTTTCATACGACCAGGTGGAGTGGCACAAGATCTGCCTCTTGGCTTATGTCGAGATATTGATTCCTTCACACAACAATTTGCTTCTCGTATCGACGAATTAGAAGAGATGTCAACCGGCAACCGTATCTGGAAACAACGATTAGTGGATATTGGTACTGTCACTGCACAGCAAGCAAAGGATTGGGGATTCAGTGGTGTAATGTTAAGAGGTCGTGCGACATGA

mRNA sequence

ATGGCCCAAGAACACGCTCATTCTTCAGCTGTAGAGAGACTTTTGAATTGCGAGGTACCATTACGAGCTCAATATATACGAGTGTTATTCCGTGAAATAACTCGAATTTCAAATCATTCACTTGCTTTAACTACTCATGCTATGGATGTGGGAGCATCAACTCCGTTCCTGTGGGCTTTTGAGGAGCGGGAGAAATTATTGGAATTCTATGAAAGAGTCTCGGGAGCCAGGATGCATGCCAGTTTCATACGACCAGGTGGAGTGGCACAAGATCTGCCTCTTGGCTTATGTCGAGATATTGATTCCTTCACACAACAATTTGCTTCTCGTATCGACGAATTAGAAGAGATGTCAACCGGCAACCGTATCTGGAAACAACGATTAGTGGATATTGGTACTGTCACTGCACAGCAAGCAAAGGATTGGGGATTCAGTGGTGTAATGTTAAGAGGTCGTGCGACATGA

Coding sequence (CDS)

ATGGCCCAAGAACACGCTCATTCTTCAGCTGTAGAGAGACTTTTGAATTGCGAGGTACCATTACGAGCTCAATATATACGAGTGTTATTCCGTGAAATAACTCGAATTTCAAATCATTCACTTGCTTTAACTACTCATGCTATGGATGTGGGAGCATCAACTCCGTTCCTGTGGGCTTTTGAGGAGCGGGAGAAATTATTGGAATTCTATGAAAGAGTCTCGGGAGCCAGGATGCATGCCAGTTTCATACGACCAGGTGGAGTGGCACAAGATCTGCCTCTTGGCTTATGTCGAGATATTGATTCCTTCACACAACAATTTGCTTCTCGTATCGACGAATTAGAAGAGATGTCAACCGGCAACCGTATCTGGAAACAACGATTAGTGGATATTGGTACTGTCACTGCACAGCAAGCAAAGGATTGGGGATTCAGTGGTGTAATGTTAAGAGGTCGTGCGACATGA

Protein sequence

MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPFLWAFEEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRIDELEEMSTGNRIWKQRLVDIGTVTAQQAKDWGFSGVMLRGRAT

Homology

[Close]

BLAST of Lsi01G010910 vs. ExPASy Swiss-Prot
Match: Q36450 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nicotiana sylvestris OX=4096 GN=NAD7 PE=2 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 7.9e-82
Identity = 150/151 (99.34%), Postives = 150/151 (99.34%), Query Frame = 0


Query: 1   MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPFLWAF 60
           MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPFLWAF
Sbjct: 76  MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPFLWAF 135

Query: 61  EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRIDELEEMSTG 120
           EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLC DIDSFTQQFASRIDELEEMSTG
Sbjct: 136 EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCIDIDSFTQQFASRIDELEEMSTG 195

Query: 121 NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRG 152
           NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRG
Sbjct: 196 NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRG 226

[Close]

BLAST of Lsi01G010910 vs. ExPASy Swiss-Prot
Match: P93306 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Arabidopsis thaliana OX=3702 GN=NAD7 PE=1 SV=2)

HSP 1 Score: 289.3 bits (739), Expect = 2.6e-77
Identity = 143/151 (94.70%), Postives = 145/151 (96.03%), Query Frame = 0


Query: 1   MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPFLWAF 60
           MAQEHA+S AVE+LLNCEVPLRAQYIRVLF EITRI NH LALTTHAMDVGA TPFLWAF
Sbjct: 76  MAQEHAYSLAVEKLLNCEVPLRAQYIRVLFCEITRILNHLLALTTHAMDVGALTPFLWAF 135

Query: 61  EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRIDELEEMSTG 120
           EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRIDELEEM TG
Sbjct: 136 EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRIDELEEMLTG 195

Query: 121 NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRG 152
           NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRG
Sbjct: 196 NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRG 226

[Close]

BLAST of Lsi01G010910 vs. ExPASy Swiss-Prot
Match: Q9TC96 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nephroselmis olivacea OX=31312 GN=NAD7 PE=3 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 1.9e-64
Identity = 121/151 (80.13%), Postives = 131/151 (86.75%), Query Frame = 0


Query: 1   MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPFLWAF 60
           M QEHA+S AVE+LL+CEVP RAQYIRVLF EITRI NH LALTTHAMDVGA TPFLWAF
Sbjct: 80  MCQEHAYSLAVEKLLHCEVPERAQYIRVLFSEITRILNHLLALTTHAMDVGALTPFLWAF 139

Query: 61  EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRIDELEEMSTG 120
           EEREKL+EFYERVSG+RMHA++IRPGGVA DLP  LC DI  F QQFASRIDE+EEM T 
Sbjct: 140 EEREKLIEFYERVSGSRMHAAYIRPGGVACDLPANLCEDIYLFCQQFASRIDEMEEMLTN 199

Query: 121 NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRG 152
           NRIWKQRLVDIG VTA+ A  WGFSGV+LRG
Sbjct: 200 NRIWKQRLVDIGIVTAENAFAWGFSGVLLRG 230

[Close]

BLAST of Lsi01G010910 vs. ExPASy Swiss-Prot
Match: O21270 (NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Reclinomonas americana OX=48483 GN=NAD7 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 5.7e-64
Identity = 115/151 (76.16%), Postives = 134/151 (88.74%), Query Frame = 0


Query: 1   MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPFLWAF 60
           MAQEHA+S AVE+LL CEVP RAQYIRVLF EITRI NH +A+TTHA+DVGA TPFLW F
Sbjct: 78  MAQEHAYSLAVEKLLGCEVPKRAQYIRVLFCEITRILNHLMAVTTHALDVGAMTPFLWGF 137

Query: 61  EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRIDELEEMSTG 120
           EEREKL+EFYERVSGARMHA++IRPGGV+QD+P+GL  DI  F +QF SRIDE+E++ + 
Sbjct: 138 EEREKLMEFYERVSGARMHAAYIRPGGVSQDMPMGLSEDIYKFAKQFGSRIDEIEDVLSS 197

Query: 121 NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRG 152
           NRIWKQRLVDIGTV+A++A DWGFSGVMLRG
Sbjct: 198 NRIWKQRLVDIGTVSAEEALDWGFSGVMLRG 228

[Close]

BLAST of Lsi01G010910 vs. ExPASy Swiss-Prot
Match: Q37619 (NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Prototheca wickerhamii OX=3111 GN=NAD7 PE=3 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 2.2e-63
Identity = 118/153 (77.12%), Postives = 133/153 (86.93%), Query Frame = 0


Query: 1   MAQEHAHSSAVERLLNC--EVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPFLW 60
           M QEHA+S AVE+LLN   ++PLRAQYIRVLF EITRI NH LA+T HAMDVGA TPFLW
Sbjct: 80  MCQEHAYSLAVEKLLNISKDIPLRAQYIRVLFSEITRILNHLLAVTCHAMDVGALTPFLW 139

Query: 61  AFEEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRIDELEEMS 120
            FEEREKL+EFYERVSGARMHA++IRPGGVA DLPLGLC DI  F++QFASRIDE+EEM 
Sbjct: 140 GFEEREKLMEFYERVSGARMHAAYIRPGGVALDLPLGLCEDIYKFSKQFASRIDEIEEML 199

Query: 121 TGNRIWKQRLVDIGTVTAQQAKDWGFSGVMLRG 152
           T NRIWKQRLVD+G V+A+QA DW FSGV+LRG
Sbjct: 200 TSNRIWKQRLVDVGVVSAEQALDWSFSGVLLRG 232

[Close]

BLAST of Lsi01G010910 vs. ExPASy TrEMBL
Match: A0A6A1V6V3 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Morella rubra OX=262757 GN=CJ030_MR3G009556 PE=3 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 8.2e-82
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPFLWAF 60
           MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPFLWAF
Sbjct: 1   MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPFLWAF 60

Query: 61  EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRIDELEEMSTG 120
           EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRIDELEEMSTG
Sbjct: 61  EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRIDELEEMSTG 120

Query: 121 NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRGRAT 155
           NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRGRAT
Sbjct: 121 NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRGRAT 154

[Close]

BLAST of Lsi01G010910 vs. ExPASy TrEMBL
Match: A0A2R4IRX0 (Putative NADH dehydrogenase subunit 7 OS=Helianthus annuus OX=4232 GN=nad7 PE=3 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 6.9e-81
Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPFLWAF 60
           MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPFLWAF
Sbjct: 2   MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPFLWAF 61

Query: 61  EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRIDELEEMSTG 120
           EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDS TQQFASRIDELEEMSTG
Sbjct: 62  EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSSTQQFASRIDELEEMSTG 121

Query: 121 NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRGRAT 155
           NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRGRAT
Sbjct: 122 NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRGRAT 155

[Close]

BLAST of Lsi01G010910 vs. ExPASy TrEMBL
Match: A0A6J5VX16 (Complex1_49kDa domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS3324 PE=3 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 6.9e-81
Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPFLWAF 60
           MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPFLWAF
Sbjct: 2   MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPFLWAF 61

Query: 61  EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRIDELEEMSTG 120
           EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDS TQQFASRIDELEEMSTG
Sbjct: 62  EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSSTQQFASRIDELEEMSTG 121

Query: 121 NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRGRAT 155
           NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRGRAT
Sbjct: 122 NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRGRAT 155

[Close]

BLAST of Lsi01G010910 vs. ExPASy TrEMBL
Match: R4IUK7 (Complex1_49kDa domain-containing protein OS=Vicia faba OX=3906 GN=nad7 PE=3 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 6.9e-81
Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPFLWAF 60
           MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTP LWAF
Sbjct: 1   MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPSLWAF 60

Query: 61  EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRIDELEEMSTG 120
           EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRIDELEEMSTG
Sbjct: 61  EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRIDELEEMSTG 120

Query: 121 NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRGRAT 155
           NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRGRAT
Sbjct: 121 NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRGRAT 154

[Close]

BLAST of Lsi01G010910 vs. ExPASy TrEMBL
Match: A0A2U1MF29 (B, mitochondrion OS=Artemisia annua OX=35608 GN=CTI12_AA242640 PE=3 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 6.9e-81
Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPFLWAF 60
           MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPFLWAF
Sbjct: 1   MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPFLWAF 60

Query: 61  EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRIDELEEMSTG 120
           EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDS TQQFASRIDELEEMSTG
Sbjct: 61  EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSSTQQFASRIDELEEMSTG 120

Query: 121 NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRGRAT 155
           NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRGRAT
Sbjct: 121 NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRGRAT 154

[Close]

BLAST of Lsi01G010910 vs. NCBI nr
Match: KAB1207906.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 [Morella rubra] >KAG6585930.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG6621705.1 hypothetical protein I3842_Q012100 [Carya illinoinensis] >QHN95484.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein [Arachis hypogaea] >KAB1207908.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 [Morella rubra])

HSP 1 Score: 312.8 bits (800), Expect = 1.7e-81
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPFLWAF 60
           MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPFLWAF
Sbjct: 1   MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPFLWAF 60

Query: 61  EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRIDELEEMSTG 120
           EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRIDELEEMSTG
Sbjct: 61  EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRIDELEEMSTG 120

Query: 121 NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRGRAT 155
           NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRGRAT
Sbjct: 121 NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRGRAT 154

[Close]

BLAST of Lsi01G010910 vs. NCBI nr
Match: XP_042953170.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 [Carya illinoinensis])

HSP 1 Score: 310.8 bits (795), Expect = 6.4e-81
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPFLWAF 60
           MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPFLWAF
Sbjct: 76  MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPFLWAF 135

Query: 61  EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRIDELEEMSTG 120
           EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRI+ELEEMSTG
Sbjct: 136 EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRINELEEMSTG 195

Query: 121 NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRGRAT 155
           NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRGRAT
Sbjct: 196 NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRGRAT 229

[Close]

BLAST of Lsi01G010910 vs. NCBI nr
Match: KAG6633583.1 (hypothetical protein CIPAW_12G057900 [Carya illinoinensis])

HSP 1 Score: 310.8 bits (795), Expect = 6.4e-81
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPFLWAF 60
           MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPFLWAF
Sbjct: 1   MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPFLWAF 60

Query: 61  EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRIDELEEMSTG 120
           EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRI+ELEEMSTG
Sbjct: 61  EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRINELEEMSTG 120

Query: 121 NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRGRAT 155
           NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRGRAT
Sbjct: 121 NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRGRAT 154

[Close]

BLAST of Lsi01G010910 vs. NCBI nr
Match: AVV32102.1 (putative NADH dehydrogenase subunit 7 [Helianthus annuus] >CAB4293900.1 unnamed protein product [Prunus armeniaca] >AYV91183.1 putative NADH dehydrogenase subunit 7 [Helianthus annuus] >KAF5753187.1 putative NADH-quinone oxidoreductase, subunit D [NiFe]-hydrogenase, large subunit [Helianthus annuus] >KAF5810118.1 putative NADH-quinone oxidoreductase, subunit D [NiFe]-hydrogenase, large subunit [Helianthus annuus])

HSP 1 Score: 309.7 bits (792), Expect = 1.4e-80
Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPFLWAF 60
           MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPFLWAF
Sbjct: 2   MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPFLWAF 61

Query: 61  EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRIDELEEMSTG 120
           EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDS TQQFASRIDELEEMSTG
Sbjct: 62  EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSSTQQFASRIDELEEMSTG 121

Query: 121 NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRGRAT 155
           NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRGRAT
Sbjct: 122 NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRGRAT 155

[Close]

BLAST of Lsi01G010910 vs. NCBI nr
Match: AGC78908.1 (hypothetical protein [Vicia faba] >AGC78935.1 hypothetical protein [Vicia faba] >AGC79022.1 hypothetical protein [Vicia faba] >QTC32807.1 NADH dehydrogenase subunit 7 [Ormosia boluoensis])

HSP 1 Score: 309.7 bits (792), Expect = 1.4e-80
Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPFLWAF 60
           MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTP LWAF
Sbjct: 1   MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPSLWAF 60

Query: 61  EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRIDELEEMSTG 120
           EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRIDELEEMSTG
Sbjct: 61  EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRIDELEEMSTG 120

Query: 121 NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRGRAT 155
           NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRGRAT
Sbjct: 121 NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRGRAT 154

[Close]

BLAST of Lsi01G010910 vs. TAIR 10
Match: ATMG00510.1 (NADH dehydrogenase subunit 7 )

HSP 1 Score: 303.9 bits (777), Expect = 7.3e-83
Identity = 149/151 (98.68%), Postives = 150/151 (99.34%), Query Frame = 0


Query: 1   MAQEHAHSSAVERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPFLWAF 60
           MAQEHAHSSAVE+LLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGA TPFLWAF
Sbjct: 76  MAQEHAHSSAVEKLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGALTPFLWAF 135

Query: 61  EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRIDELEEMSTG 120
           EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRIDELEEMSTG
Sbjct: 136 EEREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRIDELEEMSTG 195

Query: 121 NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRG 152
           NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRG
Sbjct: 196 NRIWKQRLVDIGTVTAQQAKDWGFSGVMLRG 226

[Close]

BLAST of Lsi01G010910 vs. TAIR 10
Match: ATCG01110.1 (NAD(P)H dehydrogenase subunit H )

HSP 1 Score: 114.4 bits (285), Expect = 8.2e-26
Identity = 56/139 (40.29%), Postives = 84/139 (60.43%), Query Frame = 0


Query: 12  ERLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGASTPFLWAFEEREKLLEFYE 71
           E+L N +VP RA YIRV+  E++RI++H L L     D+GA TPF + F ERE + + +E
Sbjct: 87  EQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFREREFVYDLFE 146

Query: 72  RVSGARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRIDELEEMSTGNRIWKQRLVDI 131
             +G RM  +F R GG+A DLP G       F   F + + E +++ T N I+ +R+  +
Sbjct: 147 AATGMRMMHNFFRIGGIAADLPYGWIDKCLDFCDYFLTEVVEYQKLITRNPIFLERVEGV 206

Query: 132 GTVTAQQAKDWGFSGVMLR 151
           G +  ++A +WG SG MLR
Sbjct: 207 GIIGGEEAINWGLSGPMLR 225

The following BLAST results are available for this feature:

BLAST of Lsi01G010910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q36450	7.9e-82	99.34	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nicotiana sylvestris OX...	[more]
P93306	2.6e-77	94.70	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Arabidopsis thaliana OX...	[more]
Q9TC96	1.9e-64	80.13	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nephroselmis olivacea O...	[more]
O21270	5.7e-64	76.16	NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Reclinomonas americana OX=48483...	[more]
Q37619	2.2e-63	77.12	NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Prototheca wickerhamii OX=3111 ...	[more]

BLAST of Lsi01G010910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6A1V6V3	8.2e-82	100.00	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Morella rubra OX=262757...	[more]
A0A2R4IRX0	6.9e-81	99.35	Putative NADH dehydrogenase subunit 7 OS=Helianthus annuus OX=4232 GN=nad7 PE=3 ...	[more]
A0A6J5VX16	6.9e-81	99.35	Complex1_49kDa domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDH...	[more]
R4IUK7	6.9e-81	99.35	Complex1_49kDa domain-containing protein OS=Vicia faba OX=3906 GN=nad7 PE=3 SV=1	[more]
A0A2U1MF29	6.9e-81	99.35	B, mitochondrion OS=Artemisia annua OX=35608 GN=CTI12_AA242640 PE=3 SV=1	[more]

BLAST of Lsi01G010910 vs. NCBI nr


Match Name	E-value	Identity	Description
KAB1207906.1	1.7e-81	100.00	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 [Morella rubra] >KAG658593...	[more]
XP_042953170.1	6.4e-81	99.35	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 [Carya illinoinensis]	[more]
KAG6633583.1	6.4e-81	99.35	hypothetical protein CIPAW_12G057900 [Carya illinoinensis]	[more]
AVV32102.1	1.4e-80	99.35	putative NADH dehydrogenase subunit 7 [Helianthus annuus] >CAB4293900.1 unnamed ...	[more]
AGC78908.1	1.4e-80	99.35	hypothetical protein [Vicia faba] >AGC78935.1 hypothetical protein [Vicia faba] ...	[more]

BLAST of Lsi01G010910 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00510.1	7.3e-83	98.68	NADH dehydrogenase subunit 7	[more]
ATCG01110.1	8.2e-26	40.29	NAD(P)H dehydrogenase subunit H	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001135	NADH-quinone oxidoreductase, subunit D	PFAM	PF00346	Complex1_49kDa	coord: 49..151 e-value: 1.4E-38 score: 132.5
IPR029014	[NiFe]-hydrogenase, large subunit	GENE3D	1.10.645.10		coord: 1..153 e-value: 7.4E-66 score: 224.4
IPR029014	[NiFe]-hydrogenase, large subunit	SUPERFAMILY	56762	HydB/Nqo4-like	coord: 1..152
None	No IPR available	PANTHER	PTHR11993:SF41	NADH DEHYDROGENASE SUBUNIT 7	coord: 1..152
IPR022885	NAD(P)H-quinone oxidoreductase subunit D/H	PANTHER	PTHR11993	NADH-UBIQUINONE OXIDOREDUCTASE 49 KDA SUBUNIT	coord: 1..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G010910.1	Lsi01G010910.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0016651	oxidoreductase activity, acting on NAD(P)H
molecular_function	GO:0048038	quinone binding