Lsi01G010590 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G010590
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Shikimate kinase
Location	chr01: 8788319 .. 8793358 (-)
RNA-Seq Expression	Lsi01G010590
Synteny	Lsi01G010590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTCGAGGTTTTTTTTCTTCGTTCGGTATCCCTCTTTTTTCATCAATTTCTCCACGTGATCAGTATTCAATACAACTTGCAGGTCGTTTGTGGTTATCTCTGGCTGTAAAGGTTAATCCAGGTAGCGGAGGAACAGAGTTGCTTTGGCAGAGACTATGGAGGCCAACGTAGGACATTTGCAGCATTTATCGAACCGGATTGATTTCGGAACGTTTGTGAGGAAACCGAGTGGATTGGTTCGATTTCTTCAGCCAATTTCTGATCAGCAGAAGCTTCCAGGGCTTGTTTCAGCTTTTCAGCAACCTCTGAGACTTTCAAATCGATGCAGGACGGTCTCTGTTGAGGCCTCCTGCTATCGTGAGAATATTTCAGGTAACACGAGATTTTGGAATTCCAGTGAGCGTGATTAGGAATGTGCGTTTTTCTTTGTTCTTCCTCTTTTCTTTCATTCGTGGTCATTTCACTTGTTTGAATGTTTTTTGAGTTGCATTCTCATTTGAGGTTTTTGACTTGGTGATTGGAACAACATCTGACATGACAAAGCAACGAAGCAATTATGCTTCGCGACAAGATATATACTCTATTGCTCTGAACTTGATTTATAGTGGGGACTTCTGATTGAATGCACGAACTACGGTGTACAATCGAGTAACTTGTCTGAAGCAGTCTAATTCTACATCTATCATGTTATGTTATCTGTAGTTTTTTTTTTTTCCTGAAATTTCAATAGAACCTTTTACATTATTAAGACCTCGACATCTCTCATGTCTTATTGTGCTATAATCACATTTAAGTAGTAACAGAATGGAAATGGTTTGAAAAATGAAGTTCGATATCATACTCAGAAAACTTTTGAGTGGCTTCTTCTCAATACAGTTAGGCCCCTAGGATAGATTTAGAGAAGGCTCCAACTAAAACCAATTAGAATTAAATTTGAGAATGAAAATAAGATTTCTATCATGGTTTTAACTGAAACTATTGAGTAGAGAGAAATATTGTTGGTACTGTTTACTAATCTTGGGATGGGGTTGCTATTAAACTGGTGTTGACTCAGAAATGCATAGCAAGACATAGAAAAATTTACATTGTCCACTTCCTAAGTGGAATCGACCAATGTCCGTTAACTCTTGGTTCTGGCCGATGAATTAAGAATGACATTGTATTCTAAGTAAGCAAAGGGAACGAAAAATAAAATGAACATTGCTATAGTATTTAATAGGTGTTTGAGTACTTGACATGGATTATAAAATGGTCTCAAACTTGGTGTCTAAAATTCTTGAAAAATGCATCCCAGCAACTGCTCCTCCTTGTAATTATATTTCTTATTTAATCGGCCTCTCAGTGTGTAAGTACTGTATTTATAAGTTCATCTGTTGGATTTTTGTGTGCCTTCAAATCTTTAAAGGAGAAGTGCTCTGCTGAGCGGATCCACATTCTTTCACATTATCTTGTATGATTCCATTAGTGACTTTGTTACCATTCAAAAGGCCAATAGCCCCAGATTAAAACATGCTTTTTGTTTTATTATTTTGTTGTTGTCATGCATGATGATTGATGAATAATCTGTATCATATTGTCTTCCTTCTTTTTGTCTACTGCTTGCAATTAACCAACTGATCTTTGGCTTATTGCTTTTCAATATTCCTTTTGTAGGTTTGACATTGGAAACTGAAAATTTTCATCCCTTCGACAAAGATCTACATTTAAAGGTCAAGCAGAACTCCTGTTATATGTTTACACCTTAATTAGAGTTGTGGTAACGTGGGATATGTGCTTTTCTTTCTGATTCATGGAATCTACTCTTCTCCCCTCCCTTAAATAGCTTTAGGACCATAATAGAATATTTGAACAGAACTTTGATGTGCAAATTTGAAAGTTAATCTAATTAGAATTTGGACAAAAAGTGCAGAATAAGTCACAAGAAGTCCTGCCCCATCTAAATGGACGATGCATATATCTAGTTGGTTAGTGTCTTTTCTTTTTTACACTTTATAATTGGCAATTCTTCTGCTTGGATACTAAATCTATCTAAATGCTCATTTGCAGGAATGATGGGCTCTGGGAAGACAACCATAGGCAAGATTTTAGCAAAAGAATTGGGTTACACATTTTCTGACAGGTTTGTTACTTAATTGCTAGCAAGCGAAGGACTTTAAAGAACATATTGGGAGAAAAACTATTGCCCAATTTCATCATCACATCATTATTCCAGCATCCAAGGTTTATTACGAAGCTGAACTGAGTTGGAACAACAGTTTTGAAGTGATATCACAAGCAAATATTTGATTTTTACTATGCTTTCTGATTGAAAATTATGTCATTCATAATTTGCATCCATTTTGAACACAAATATGTTAATGCAAGTTTCTTGTGAGCGATTTTCTTTCATATTAATTATGCTTTACATATCTGGATCAGCGATATATTGGTGGAGCAAGAAGTTGGTGGAACTTCAGTGGCTGAAATTTTCAAGCTTCATGGCGAGGTCTTTTTCAGAGATAAGGAGGTTAGTTAGCACAGGCCATTTCACTATCATTTCTATCTGTGAAGTAGGTGGTTATCACTATCTACTATATTTGATGTTCTTATGAACTGGGTGTAATGTGGGAAGTACAGTACATCATATGATAATTTTCATTGAAGTGAAATTTTTTAACTCTTGAGATGTTAGAAGGGGCAAATGTCAGCATGTGATTTTCCTTCCTCTTTGATAGAAATTGAAAGGGACCTAGATTTATAATTAGGGATGTCCAAAAGGCCGGATGAATTTTCAGTTAGGCTGAGTTAAAATTTTGTATGGATTGGTTTTACTACAGATAGATTAAACCCCCCTAGATTGGATTAGTTCATGAGTACTAAACTTAGTTTGGATTGGACCAAATGTATTCAAGTTTGTGCATTGAAAAAAGATCTCTTTTACTTATAACGTACCTATGTATATGCTTTTTTTTTTCTTTTCATTTTTTTTTTGGAATAAAAAGATTCATTTCACTTTGTTAGCTTTTCTAGATTTGTGAATTCTCCAATAACTTTTAGAAACTAATCTGTTGATAAGTCCTTGAAATATTATTTTTGATAATGTACAATTCTGTGGTGAATGACTATTTACCATTTAAATGTGTGAAAATAGAGCAATAGATCTTTTTTTTTATTGTTTTATTTATTTATTTATTTATTTATTATAATTTAATGATCGATGATTTGAACTATCCCAACCAAGCTATATTATATGGTAGGTTGGGTTGGGTTGGGTTGAGTTTGGCCCAATACTCAATTTAATTCAAGGTTATTTGGGCTGGACAAATATTGTTACCTGAACTTTTGTCAAGTCCAAAATGTCTTTGAATGAAGCCTCTCAACCCACCCCAATACATCCTTCCCTATTATTGATCCGTGCTATTTTTCCAATTAGTAATAGTTTGGGCATATTCATCGATTAATTTCAAGTTTGATTGTTGTTTACTATAATCAGTCGCGGAACTTTCATCGATTGATTGATATTTTAAAAAGTATTTGAAGATTATGCCGCTTTTTCAAACATGATGCTTCTTAGCCATTCTTGCTACAATCCCTAGTTACTATTGCTGTCTTTTCCCCCTTGTCTAGCTGCCATGGTATCAAGCAGCTAAGTAAAATGTTTTGCAACTCTGAGCTGTTATAGCAGATCAAAGTTAAGTGACAGTGATTTTCCTGTTAGACTGAGGTGTTGAGAAAACTATCATTGATGCACGGGTTTGTTATTTCCACTGGTGGAGGTATTGTTGTTCGGCCTATTAACTGGTAATTTGTTTGGACATTGACACTTTCTAATTGTTATGTGGTTGTCTGTGTTTGTTAAGTGAGAGTTGTCCTATTTGATTGTAGGAAATATATGCAGAACGGGATCAGCATCTGGCTAGATGTGCCACTAGAAGCCTTGGCAAAGAGAATTGCTGCAGTAGGTACTGACTCTCGCCCCCTCTTGCACCATGAGTCAGGCAATGCCTACACGAAGGTGGTGAATCATTTTCCATGAGGAAACATTTATCCATGAACTATTCACTTTTCTTTATTTAGGTTTCATGGGTGCTGCTTATTGGTCGTAGTTCTCGTGAACTCGTCATGCTTGATCCTAATACATATTTAAATCTGCTGATTCTCATTCAGGCTTTCAGGCGATTGTCAATTCTTCTAGAGGAGAGGGGTGATGCATATGCCAACGCCAATGCCAAAGTTTGTTTAGGAAGTATGAAATAAAGAAATCTTGATATCCTTTATCTTTCTCGAAACATAGAAGTTAAATAGAACTTCATTACATGATCTCTTTCCTCCAATCTTTTCACGCCCGAACCCCTAAAATTACAATGTATGTTTATTGTTCCTGTATCTTCTGTTTAAAGAAGGTGGTTAAAACTTAAAATCAAGTTTTTTCTTAACTTACAGGTCTTGCAGCCAAGCTAGGGTTGTCAGATGTTTGTAATCTTACACCTGCAGATATTGCTATAGAGGTTCCTCTCTTTCTGCCTCATCTAGCTAGCTTTGTTCTTGCTATGTTTGTTTAAAAATCTGACCTCCAAATAAAGAGAGAACCTTGTAAATTTGGAATTCTTTTTTAAATTTTACTTTATGACACTACTTGAAATTTAAGTTTATTCTTTTCAGGCGCTTGTACAAATTCAGCACTTCCTAGAACAGGAAGACGATTATTCTACAAGTTAAAGATTGCAAATGTTCAATATCCAGTGCTTTAAGCTAAGCCCTCTCTTTTTAAAGAAGCATGGAAACGCATTGCTTCTACTCTTGTTCATTGTATAATTATGGGATGGTAAGTGCTTTTTTAGAACTTGATGCTCTGGTTGGTGTGAATAATAACCTTTTAAAATGTCAATGCTAGAAGTGTATGTATGAAAATTTTGAGGTAATAAAACTTGTGTGTGTATACATAGTGCATACAGTAGTCAAAGACATACAGTATATACTATATAGTCTATTGCAGCTGTAAGTTATAATTTATATATTGCTGTTTGATCACAATTTTATTTTGCAATGCATTTGAAATTG

mRNA sequence

AGTCGAGCGGAGGAACAGAGTTGCTTTGGCAGAGACTATGGAGGCCAACGTAGGACATTTGCAGCATTTATCGAACCGGATTGATTTCGGAACGTTTGTGAGGAAACCGAGTGGATTGGTTCGATTTCTTCAGCCAATTTCTGATCAGCAGAAGCTTCCAGGGCTTGTTTCAGCTTTTCAGCAACCTCTGAGACTTTCAAATCGATGCAGGACGGTCTCTGTTGAGGCCTCCTGCTATCGTGAGAATATTTCAGGTTTGACATTGGAAACTGAAAATTTTCATCCCTTCGACAAAGATCTACATTTAAAGAATAAGTCACAAGAAGTCCTGCCCCATCTAAATGGACGATGCATATATCTAGTTGGAATGATGGGCTCTGGGAAGACAACCATAGGCAAGATTTTAGCAAAAGAATTGGGTTACACATTTTCTGACAGCGATATATTGGTGGAGCAAGAAGTTGGTGGAACTTCAGTGGCTGAAATTTTCAAGCTTCATGGCGAGGTCTTTTTCAGAGATAAGGAGACTGAGGTGTTGAGAAAACTATCATTGATGCACGGGTTTGTTATTTCCACTGGTGGAGTGAGAGTTGTCCTATTTGATTGTAGGAAATATATGCAGAACGGGATCAGCATCTGGCTAGATGTGCCACTAGAAGCCTTGGCAAAGAGAATTGCTGCAGTAGGTACTGACTCTCGCCCCCTCTTGCACCATGAGTCAGGCAATGCCTACACGAAGGTGGTTTCATGGGTGCTGCTTATTGGTCGTAGTTCTCGTGAACTCGTCATGCTTGATCCTAATACATATTTAAATCTGCTGATTCTCATTCAGGCTTTCAGGCGATTGTCAATTCTTCTAGAGGAGAGGGGTGATGCATATGCCAACGCCAATGCCAAAGTTTGTTTAGGAAGTCTTGCAGCCAAGCTAGGGTTGTCAGATGTTTGTAATCTTACACCTGCAGATATTGCTATAGAGGTTCCTCTCTTTCTGCCTCATCTAGCTAGCTTTGTTCTTGCTATGTTTGCGCTTGTACAAATTCAGCACTTCCTAGAACAGGAAGACGATTATTCTACAAGTTAAAGATTGCAAATGTTCAATATCCAGTGCTTTAAGCTAAGCCCTCTCTTTTTAAAGAAGCATGGAAACGCATTGCTTCTACTCTTGTTCATTGTATAATTATGGGATGGTAAGTGCTTTTTTAGAACTTGATGCTCTGGTTGGTGTGAATAATAACCTTTTAAAATGTCAATGCTAGAAGTGTATGTATGAAAATTTTGAGGTAATAAAACTTGTGTGTGTATACATAGTGCATACAGTAGTCAAAGACATACAGTATATACTATATAGTCTATTGCAGCTGTAAGTTATAATTTATATATTGCTGTTTGATCACAATTTTATTTTGCAATGCATTTGAAATTG

Coding sequence (CDS)

ATGGAGGCCAACGTAGGACATTTGCAGCATTTATCGAACCGGATTGATTTCGGAACGTTTGTGAGGAAACCGAGTGGATTGGTTCGATTTCTTCAGCCAATTTCTGATCAGCAGAAGCTTCCAGGGCTTGTTTCAGCTTTTCAGCAACCTCTGAGACTTTCAAATCGATGCAGGACGGTCTCTGTTGAGGCCTCCTGCTATCGTGAGAATATTTCAGGTTTGACATTGGAAACTGAAAATTTTCATCCCTTCGACAAAGATCTACATTTAAAGAATAAGTCACAAGAAGTCCTGCCCCATCTAAATGGACGATGCATATATCTAGTTGGAATGATGGGCTCTGGGAAGACAACCATAGGCAAGATTTTAGCAAAAGAATTGGGTTACACATTTTCTGACAGCGATATATTGGTGGAGCAAGAAGTTGGTGGAACTTCAGTGGCTGAAATTTTCAAGCTTCATGGCGAGGTCTTTTTCAGAGATAAGGAGACTGAGGTGTTGAGAAAACTATCATTGATGCACGGGTTTGTTATTTCCACTGGTGGAGTGAGAGTTGTCCTATTTGATTGTAGGAAATATATGCAGAACGGGATCAGCATCTGGCTAGATGTGCCACTAGAAGCCTTGGCAAAGAGAATTGCTGCAGTAGGTACTGACTCTCGCCCCCTCTTGCACCATGAGTCAGGCAATGCCTACACGAAGGTGGTTTCATGGGTGCTGCTTATTGGTCGTAGTTCTCGTGAACTCGTCATGCTTGATCCTAATACATATTTAAATCTGCTGATTCTCATTCAGGCTTTCAGGCGATTGTCAATTCTTCTAGAGGAGAGGGGTGATGCATATGCCAACGCCAATGCCAAAGTTTGTTTAGGAAGTCTTGCAGCCAAGCTAGGGTTGTCAGATGTTTGTAATCTTACACCTGCAGATATTGCTATAGAGGTTCCTCTCTTTCTGCCTCATCTAGCTAGCTTTGTTCTTGCTATGTTTGCGCTTGTACAAATTCAGCACTTCCTAGAACAGGAAGACGATTATTCTACAAGTTAA

Protein sequence

MEANVGHLQHLSNRIDFGTFVRKPSGLVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRTVSVEASCYRENISGLTLETENFHPFDKDLHLKNKSQEVLPHLNGRCIYLVGMMGSGKTTIGKILAKELGYTFSDSDILVEQEVGGTSVAEIFKLHGEVFFRDKETEVLRKLSLMHGFVISTGGVRVVLFDCRKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTKVVSWVLLIGRSSRELVMLDPNTYLNLLILIQAFRRLSILLEERGDAYANANAKVCLGSLAAKLGLSDVCNLTPADIAIEVPLFLPHLASFVLAMFALVQIQHFLEQEDDYSTS

Homology

[Close]

BLAST of Lsi01G010590 vs. ExPASy Swiss-Prot
Match: Q9SJ05 (Shikimate kinase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SK1 PE=1 SV=2)

HSP 1 Score: 268.1 bits (684), Expect = 1.4e-70
Identity = 162/343 (47.23%), Postives = 207/343 (60.35%), Query Frame = 0


Query: 1   MEANVGHLQHLSNRIDFGTFVRKPS-GLVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRT 60
           MEA +       + +D      KP  G +R+ Q +   ++  GL  A  QP R +++ R 
Sbjct: 1   MEAAITQRIQYPSWVDCRKVECKPQRGSLRYSQQVKVDRRFRGLSLARLQPERRNDQRRA 60

Query: 61  VSVEASCYRENISGLTLETENFHPFDKDLHLKNKSQEVLPHLNGRCIYLVGMMGSGKTTI 120
           VS   SC   N S L LET + +PFD+D+ LK K++EV P+LNGR +YLVGMMGSGKTT+
Sbjct: 61  VSPAVSCSDNNSSAL-LETGSVYPFDEDI-LKRKAEEVKPYLNGRSMYLVGMMGSGKTTV 120

Query: 121 GKILAKELGYTFSDSDILVEQEVGGTSVAEIFKLHGEVFFRDKETEVLRKLSLMHGFVIS 180
           GK+++K LGYTF D D L+EQ + GTSVAEIF  HGE FFR KET+ L+KLS  +  V+S
Sbjct: 121 GKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFRGKETDALKKLSSRYQVVVS 180

Query: 181 TGGVRVVLFDCRKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTKVVSWV 240
           TGG  V+     KYM  GISIWLDVPLEALA RIAAVGTDSRPLLH ESG+AY+      
Sbjct: 181 TGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHDESGDAYS------ 240

Query: 241 LLIGRSSRELVMLDPNTYLNLLILIQAFRRLSILLEERGDAYANANAKVCLGSLAAKLGL 300
                                     AF+RLS + +ERG+AY NANA+V L ++AAK G 
Sbjct: 241 -------------------------VAFKRLSAIWDERGEAYTNANARVSLENIAAKRGY 294

Query: 301 SDVCNLTPADIAIEVPLFLPHLASFVLAMFALVQIQHFLEQED 343
            +V +LTP +IAIE                A  Q+  FLE+E+
Sbjct: 301 KNVSDLTPTEIAIE----------------AFEQVLSFLEKEE 294

[Close]

BLAST of Lsi01G010590 vs. ExPASy Swiss-Prot
Match: Q00497 (Shikimate kinase, chloroplastic OS=Solanum lycopersicum OX=4081 GN=SK PE=1 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 5.9e-69
Identity = 154/342 (45.03%), Postives = 207/342 (60.53%), Query Frame = 0


Query: 1   MEANVGHLQHLSNRIDFGTFVRKPSGLVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRTV 60
           MEA V     LS+ I+    VRKPSGL+RF +  +++ +   +VS   QP + ++  R V
Sbjct: 1   MEARVSQSLQLSSWINSDKVVRKPSGLLRFSEKWNEKPRHRVVVSCHLQPRKAAHSDRRV 60

Query: 61  SVEASCYRENISGLTLETENFH-PFDKDLHLKNKSQEVLPHLNGRCIYLVGMMGSGKTTI 120
            ++ SC  +N+    LE+  F    D+   LKNK++EV  +L+GRC+YLVGMMG GKTT+
Sbjct: 61  QLKVSCSPQNVQASVLESGCFSASIDEIETLKNKAEEVEEYLDGRCVYLVGMMGCGKTTV 120

Query: 121 GKILAKELGYTFSDSDILVEQEVGGTSVAEIFKLHGEVFFRDKETEVLRKLSLMHGFVIS 180
           G+ILA+ LGY+F D D L+EQ VGG +VAEIF+L GE FFRD ETEVL KLSLMH  V+S
Sbjct: 121 GRILAETLGYSFFDCDRLIEQAVGGITVAEIFELRGESFFRDNETEVLHKLSLMHRLVVS 180

Query: 181 TGGVRVVLFDCRKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTKVVSWV 240
           TGG  VV     ++M  GIS+WLDVPLEALAKRI   GT SRPLLH ESG+ Y   +   
Sbjct: 181 TGGGAVVRPINWRHMHKGISVWLDVPLEALAKRITTEGTKSRPLLHEESGDVYDTTL--- 240

Query: 241 LLIGRSSRELVMLDPNTYLNLLILIQAFRRLSILLEERGDAYANANAKVCLGSLAAKLGL 300
                                       +RL+ L+E RG+ YANA+A+V L ++A K   
Sbjct: 241 ----------------------------KRLTTLMETRGENYANASARVSLENIALKRE- 294

Query: 301 SDVCNLTPADIAIEVPLFLPHLASFVLAMFALVQIQHFLEQE 342
            DVC++TPA+I +EV                L+QI++FL+ +
Sbjct: 301 KDVCHITPAEITLEV----------------LIQIENFLKTQ 294

[Close]

BLAST of Lsi01G010590 vs. ExPASy Swiss-Prot
Match: Q8GY88 (Shikimate kinase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SK2 PE=1 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 5.0e-60
Identity = 157/348 (45.11%), Postives = 196/348 (56.32%), Query Frame = 0


Query: 1   MEANVGHLQHLSNRIDFGTFVRKPSGLVRF-LQPISDQQKLPGLVSAFQQPLRLSNRCRT 60
           MEA        S+  D   F  KP G +R+  Q I + ++    V A     R  +R R+
Sbjct: 1   MEAATVQRFQYSSWNDLRNFEGKPRGSLRYNTQRIKEDKRF--RVVALTLDKRRDHRLRS 60

Query: 61  VSVEASCYRENISGLTLETENF--HPFDKDLH-LKNKSQEVLPHLNGRCIYLVGMMGSGK 120
           VS       +  S   LET +    PFD++   LK K++EV P+LNGR +YLVGMMGSGK
Sbjct: 61  VS-------DKNSSALLETGSLLHSPFDEEQQILKKKAEEVKPYLNGRSMYLVGMMGSGK 120

Query: 121 TTIGKILAKELGYTFSDSDILVEQEVGGTSVAEIFKLHGEVFFRDKETEVLRKLSLM-HG 180
           TT+GKI+A+ LGYTF D D L+EQ + GTSVAEIF+  GE  FR+KETE L+KLSLM H 
Sbjct: 121 TTVGKIMARSLGYTFFDCDTLIEQAMKGTSVAEIFEHFGESVFREKETEALKKLSLMYHQ 180

Query: 181 FVISTGGVRVVLFDCRKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLLH-HESGNAYTK 240
            V+STGG  V+     KYM  GISIWLDVPLEALA RIAAVGT SRPLLH  ESG+ YT 
Sbjct: 181 VVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTGSRPLLHDDESGDTYT- 240

Query: 241 VVSWVLLIGRSSRELVMLDPNTYLNLLILIQAFRRLSILLEERGDAYANANAKVCLGSLA 300
                                          A  RLS + + RG+AY  A+A+V L ++ 
Sbjct: 241 ------------------------------AALNRLSTIWDARGEAYTKASARVSLENIT 292

Query: 301 AKLGLSDVCNLTPADIAIEVPLFLPHLASFVLAMFALVQIQHFLEQED 343
            KLG   V +LTPA+IAIE                A  Q+Q +LE+ED
Sbjct: 301 LKLGYRSVSDLTPAEIAIE----------------AFEQVQSYLEKED 292

[Close]

BLAST of Lsi01G010590 vs. ExPASy Swiss-Prot
Match: Q7X7H9 (Shikimate kinase 3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SK3 PE=1 SV=2)

HSP 1 Score: 232.3 bits (591), Expect = 8.6e-60
Identity = 136/275 (49.45%), Postives = 177/275 (64.36%), Query Frame = 0


Query: 44  VSAFQQPLRLSNRCRT--VSVEASCYRENISGLTLETENFHPFDKDLHLKNKSQEVLPHL 103
           V  F QPL L +  R+    ++ SC R+  +G+    + ++  D+ L LK K+++V+P+L
Sbjct: 34  VEKFAQPLVLGSDRRSCGAKLKVSCSRKP-AGI---DKTYYSADEALVLKQKAEDVVPYL 93

Query: 104 NGRCIYLVGMMGSGKTTIGKILAKELGYTFSDSDILVEQEVGGTSVAEIFKLHGEVFFRD 163
           N RCIYLVGMMGSGKTT+GKILA+ LGY+F DSD LVE+ VG +SVAEIF+LH E FFRD
Sbjct: 94  NDRCIYLVGMMGSGKTTVGKILAEVLGYSFFDSDKLVEKAVGISSVAEIFQLHSEAFFRD 153

Query: 164 KETEVLRKLSLMHGFVISTGGVRVVLFDCRKYMQNGISIWLDVPLEALAKRIAAVGTDSR 223
            E+EVLR LS MH  V++TGG  V+      YM+ G +IWLDVPL+ALA+RIAAVGT SR
Sbjct: 154 NESEVLRDLSSMHRLVVATGGGAVIRPINWSYMKKGSTIWLDVPLDALARRIAAVGTASR 213

Query: 224 PLLHHESGNAYTKVVSWVLLIGRSSRELVMLDPNTYLNLLILIQAFRRLSILLEERGDAY 283
           PLLH ESG+ Y K                               A+ +L+ L E+R D+Y
Sbjct: 214 PLLHQESGDPYAK-------------------------------AYAKLTALFEQRMDSY 273

Query: 284 ANANAKVCLGSLAAKLGLSDVCNLTPADIAIEVPL 317
           ANA+A+V L  +A K G S+V  LTP+ IAIE  L
Sbjct: 274 ANADARVSLEHIAVKQGHSNVTTLTPSAIAIEALL 273

[Close]

BLAST of Lsi01G010590 vs. ExPASy Swiss-Prot
Match: Q5NTH4 (Shikimate kinase 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SK1 PE=1 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 8.0e-58
Identity = 124/229 (54.15%), Postives = 152/229 (66.38%), Query Frame = 0


Query: 85  DKDLHLKNKSQEVLPHLNGRCIYLVGMMGSGKTTIGKILAKELGYTFSDSDILVEQEVGG 144
           D+ L LK KS+EVL +LNGRCIYLVGMMGSGK+T+GKI+++ LGY+F DSD LVEQ VG 
Sbjct: 78  DEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGM 137

Query: 145 TSVAEIFKLHGEVFFRDKETEVLRKLSLMHGFVISTGGVRVVLFDCRKYMQNGISIWLDV 204
            SVA+IFK+H E FFRD E+ VLR LS M   V++TGG  V+     KYM+ G+S+WLDV
Sbjct: 138 PSVAQIFKVHSEAFFRDNESSVLRDLSSMKRLVVATGGGAVIRPVNWKYMKKGLSVWLDV 197

Query: 205 PLEALAKRIAAVGTDSRPLLHHESGNAYTKVVSWVLLIGRSSRELVMLDPNTYLNLLILI 264
           PL+ALA+RIA VGT SRPLL   SG+ YT                               
Sbjct: 198 PLDALARRIAKVGTASRPLLDQPSGDPYT------------------------------- 257

Query: 265 QAFRRLSILLEERGDAYANANAKVCLGSLAAKLGLSDVCNLTPADIAIE 314
            AF +LS+L E+RGDAYANA+ +V L  +A+K G  DV  LTP DIAIE
Sbjct: 258 MAFSKLSMLAEQRGDAYANADVRVSLEEIASKQGHDDVSKLTPTDIAIE 275

[Close]

BLAST of Lsi01G010590 vs. ExPASy TrEMBL
Match: A0A0A0KFZ0 (Shikimate kinase OS=Cucumis sativus OX=3659 GN=Csa_6G487590 PE=3 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 3.0e-140
Identity = 271/347 (78.10%), Postives = 280/347 (80.69%), Query Frame = 0


Query: 1   MEANVGHLQHLSNRIDFGTFVRKPSGLVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRTV 60
           ME N GHLQHLS RIDFG  VRKPSG VRFLQPISDQQKLPGLVSAFQQPLRLSNRCRTV
Sbjct: 1   MEVNFGHLQHLSIRIDFGMVVRKPSGSVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRTV 60

Query: 61  SVEASCYRENISGLTLETENFHPFDKDLHLKNKSQEVLPHLNGRCIYLVGMMGSGKTTIG 120
           SVE SCYRENISGLTLETE  HPFDKDL LKNKSQEV PHLNG+CIYLVGMMGSGKTTIG
Sbjct: 61  SVETSCYRENISGLTLETEKSHPFDKDLLLKNKSQEVQPHLNGQCIYLVGMMGSGKTTIG 120

Query: 121 KILAKELGYTFSDSDILVEQEVGGTSVAEIFKLHGEVFFRDKETEVLRKLSLMHGFVIST 180
           KILAKELGYTFSDSD LVEQEVGGTSVA+IFKLHGEVFFRDKETEVLRKLSLMHGFVIST
Sbjct: 121 KILAKELGYTFSDSDTLVEQEVGGTSVADIFKLHGEVFFRDKETEVLRKLSLMHGFVIST 180

Query: 181 GGVRVVLFDCRKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTKVVSWVL 240
           GG  VV     KYM+NGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTK      
Sbjct: 181 GGGIVVRPINWKYMRNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTK------ 240

Query: 241 LIGRSSRELVMLDPNTYLNLLILIQAFRRLSILLEERGDAYANANAKVCLGSLAAKLGLS 300
                                    AFRRLS+LLEERGDAYANANAKVCLGSLA KLGLS
Sbjct: 241 -------------------------AFRRLSVLLEERGDAYANANAKVCLGSLADKLGLS 300

Query: 301 DVCNLTPADIAIEVPLFLPHLASFVLAMFALVQIQHFLEQEDDYSTS 348
           DVCNLTPADIA+E                ALVQIQ+FLEQE+DY+T+
Sbjct: 301 DVCNLTPADIAVE----------------ALVQIQNFLEQENDYATT 300

[Close]

BLAST of Lsi01G010590 vs. ExPASy TrEMBL
Match: A0A1S3B0E4 (Shikimate kinase OS=Cucumis melo OX=3656 GN=LOC103484699 PE=3 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 9.6e-139
Identity = 269/347 (77.52%), Postives = 280/347 (80.69%), Query Frame = 0


Query: 1   MEANVGHLQHLSNRIDFGTFVRKPSGLVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRTV 60
           MEAN GHLQHLS RIDFGT VRKPSG VRFLQPISD+QKLPGLVSAFQQPLRLSNRCRTV
Sbjct: 1   MEANFGHLQHLSIRIDFGTVVRKPSGSVRFLQPISDRQKLPGLVSAFQQPLRLSNRCRTV 60

Query: 61  SVEASCYRENISGLTLETENFHPFDKDLHLKNKSQEVLPHLNGRCIYLVGMMGSGKTTIG 120
           SVE SCYRENIS LTLETE FHPFDKDL LKNKSQEV P LNGRCIYLVGMMGSGKTTIG
Sbjct: 61  SVETSCYRENISDLTLETEIFHPFDKDLLLKNKSQEVRPLLNGRCIYLVGMMGSGKTTIG 120

Query: 121 KILAKELGYTFSDSDILVEQEVGGTSVAEIFKLHGEVFFRDKETEVLRKLSLMHGFVIST 180
           KILA+ELGYTFSDSD LVEQ+VGGTSVA+IFKLHGEVFFRDKETEVL+KLSLMHGFVIST
Sbjct: 121 KILARELGYTFSDSDTLVEQDVGGTSVADIFKLHGEVFFRDKETEVLKKLSLMHGFVIST 180

Query: 181 GGVRVVLFDCRKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTKVVSWVL 240
           GG  VV     KYM+NGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAY K      
Sbjct: 181 GGGIVVRPINWKYMRNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYMK------ 240

Query: 241 LIGRSSRELVMLDPNTYLNLLILIQAFRRLSILLEERGDAYANANAKVCLGSLAAKLGLS 300
                                    AFRRLS+LLEERGDAYANANAKVCLGSLA KLGLS
Sbjct: 241 -------------------------AFRRLSVLLEERGDAYANANAKVCLGSLADKLGLS 300

Query: 301 DVCNLTPADIAIEVPLFLPHLASFVLAMFALVQIQHFLEQEDDYSTS 348
           DVCNLTPADIAIE                ALVQI+HFLEQ+DDY+T+
Sbjct: 301 DVCNLTPADIAIE----------------ALVQIRHFLEQKDDYATT 300

[Close]

BLAST of Lsi01G010590 vs. ExPASy TrEMBL
Match: A0A6J1IRL7 (Shikimate kinase OS=Cucurbita maxima OX=3661 GN=LOC111478085 PE=3 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 9.3e-134
Identity = 266/347 (76.66%), Postives = 269/347 (77.52%), Query Frame = 0


Query: 1   MEANVGHLQHLSNRIDFGTFVRKPSGLVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRTV 60
           MEAN+GHLQ+LS RID G FV KPSG VRFLQPISDQ K   LVSAFQQPLRL NRCRTV
Sbjct: 1   MEANLGHLQYLSVRIDSGMFVTKPSGSVRFLQPISDQHKPLPLVSAFQQPLRLPNRCRTV 60

Query: 61  SVEASCYRENISGLTLETENFHPFDKDLHLKNKSQEVLPHLNGRCIYLVGMMGSGKTTIG 120
           S  ASCYRENISGLTLETENFHPFDKDL LKNKS EV PHLNGRCIYLVGMMGSGKTTIG
Sbjct: 61  SFGASCYRENISGLTLETENFHPFDKDLLLKNKSHEVQPHLNGRCIYLVGMMGSGKTTIG 120

Query: 121 KILAKELGYTFSDSDILVEQEVGGTSVAEIFKLHGEVFFRDKETEVLRKLSLMHGFVIST 180
           KILAKEL YTFSDSD LVEQEVGGTSVAEIFKLHGE FFRDKETEVLRKLSLMHGFVIST
Sbjct: 121 KILAKELSYTFSDSDTLVEQEVGGTSVAEIFKLHGEGFFRDKETEVLRKLSLMHGFVIST 180

Query: 181 GGVRVVLFDCRKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTKVVSWVL 240
           GG  VV     KYMQ GISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTK      
Sbjct: 181 GGGIVVRPINWKYMQKGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTK------ 240

Query: 241 LIGRSSRELVMLDPNTYLNLLILIQAFRRLSILLEERGDAYANANAKVCLGSLAAKLGLS 300
                                    AFRRLSIL EERGDAY NANAKVCLGSLAAKLG S
Sbjct: 241 -------------------------AFRRLSILQEERGDAYTNANAKVCLGSLAAKLGFS 300

Query: 301 DVCNLTPADIAIEVPLFLPHLASFVLAMFALVQIQHFLEQEDDYSTS 348
           DVCNLTPADIA+E                ALVQIQ FLEQED YSTS
Sbjct: 301 DVCNLTPADIALE----------------ALVQIQTFLEQEDGYSTS 300

[Close]

BLAST of Lsi01G010590 vs. ExPASy TrEMBL
Match: A0A6J1GFH0 (Shikimate kinase OS=Cucurbita moschata OX=3662 GN=LOC111453690 PE=3 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 9.3e-134
Identity = 266/347 (76.66%), Postives = 270/347 (77.81%), Query Frame = 0


Query: 1   MEANVGHLQHLSNRIDFGTFVRKPSGLVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRTV 60
           MEAN+GHLQ+LS RID G FV KPSG VRFLQPISDQ K   LVSAFQQPLRL NRCRTV
Sbjct: 1   MEANLGHLQYLSIRIDSGMFVTKPSGSVRFLQPISDQHKPLPLVSAFQQPLRLPNRCRTV 60

Query: 61  SVEASCYRENISGLTLETENFHPFDKDLHLKNKSQEVLPHLNGRCIYLVGMMGSGKTTIG 120
           S  ASCYRENISGLTLETENFHPFD+DL LKNKS EV PHLNGRCIYLVGMMGSGKTTIG
Sbjct: 61  SFGASCYRENISGLTLETENFHPFDEDLLLKNKSHEVQPHLNGRCIYLVGMMGSGKTTIG 120

Query: 121 KILAKELGYTFSDSDILVEQEVGGTSVAEIFKLHGEVFFRDKETEVLRKLSLMHGFVIST 180
           KILAKEL YTFSDSD LVEQEVGGTSVAEIFKLHGE FFRDKETEVLRKLSLMHGFVIST
Sbjct: 121 KILAKELSYTFSDSDTLVEQEVGGTSVAEIFKLHGEGFFRDKETEVLRKLSLMHGFVIST 180

Query: 181 GGVRVVLFDCRKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTKVVSWVL 240
           GG  VV     KYMQ GISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTK      
Sbjct: 181 GGGIVVRPINWKYMQKGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTK------ 240

Query: 241 LIGRSSRELVMLDPNTYLNLLILIQAFRRLSILLEERGDAYANANAKVCLGSLAAKLGLS 300
                                    AFRRLSIL EERGDAY NANAKVCLGSLAAKLGLS
Sbjct: 241 -------------------------AFRRLSILQEERGDAYTNANAKVCLGSLAAKLGLS 300

Query: 301 DVCNLTPADIAIEVPLFLPHLASFVLAMFALVQIQHFLEQEDDYSTS 348
           DVCNLTPADIA+E                ALVQIQ FLEQED YSTS
Sbjct: 301 DVCNLTPADIALE----------------ALVQIQTFLEQEDGYSTS 300

[Close]

BLAST of Lsi01G010590 vs. ExPASy TrEMBL
Match: A0A6J1KYG4 (Shikimate kinase OS=Cucurbita maxima OX=3661 GN=LOC111497498 PE=3 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 3.5e-133
Identity = 262/347 (75.50%), Postives = 270/347 (77.81%), Query Frame = 0


Query: 1   MEANVGHLQHLSNRIDFGTFVRKPSGLVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRTV 60
           M  NVGHLQ+LS RID G FVRKPSG VRFL PIS QQKLP +VSAFQQPLRLSNRCRT+
Sbjct: 1   MTVNVGHLQNLSIRIDSGMFVRKPSGSVRFLLPISKQQKLPPVVSAFQQPLRLSNRCRTI 60

Query: 61  SVEASCYRENISGLTLETENFHPFDKDLHLKNKSQEVLPHLNGRCIYLVGMMGSGKTTIG 120
           SV ASCYRENISGL LETENFHPFDKDL LKNKSQEV PHLNG+CIYLVGMMGSGKTTIG
Sbjct: 61  SVGASCYRENISGLALETENFHPFDKDLLLKNKSQEVQPHLNGKCIYLVGMMGSGKTTIG 120

Query: 121 KILAKELGYTFSDSDILVEQEVGGTSVAEIFKLHGEVFFRDKETEVLRKLSLMHGFVIST 180
           KILAKEL Y FSDSD LVEQEVGGTSVAEIFKL+GE FFRDKETEVLRKLS MHGFVIST
Sbjct: 121 KILAKELSYAFSDSDTLVEQEVGGTSVAEIFKLYGEDFFRDKETEVLRKLSSMHGFVIST 180

Query: 181 GGVRVVLFDCRKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTKVVSWVL 240
           GG  VV     KYMQNGISIWLDVPLEALAKRIAAVGTDSRPLLH+ESGN YTK      
Sbjct: 181 GGGIVVRPINWKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLLHNESGNGYTK------ 240

Query: 241 LIGRSSRELVMLDPNTYLNLLILIQAFRRLSILLEERGDAYANANAKVCLGSLAAKLGLS 300
                                    AFRRLSILLEERGDAY NAN KVCLGSLAAKLGLS
Sbjct: 241 -------------------------AFRRLSILLEERGDAYTNANVKVCLGSLAAKLGLS 300

Query: 301 DVCNLTPADIAIEVPLFLPHLASFVLAMFALVQIQHFLEQEDDYSTS 348
           DVCNLTPADIA+E                ALVQIQHF+EQED Y TS
Sbjct: 301 DVCNLTPADIALE----------------ALVQIQHFVEQEDGYCTS 300

[Close]

BLAST of Lsi01G010590 vs. NCBI nr
Match: XP_038880852.1 (shikimate kinase 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 515.4 bits (1326), Expect = 3.9e-142
Identity = 276/347 (79.54%), Postives = 280/347 (80.69%), Query Frame = 0


Query: 1   MEANVGHLQHLSNRIDFGTFVRKPSGLVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRTV 60
           MEA+VGHLQHLS+RIDFGTFVRKPSG VRFLQPISDQQKLPGLVSAFQQPLRLSNRCRTV
Sbjct: 1   MEASVGHLQHLSSRIDFGTFVRKPSGSVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRTV 60

Query: 61  SVEASCYRENISGLTLETENFHPFDKDLHLKNKSQEVLPHLNGRCIYLVGMMGSGKTTIG 120
           SVE SCYRENISGLTLETEN  PFDKDL LKNKSQEV PHLNGRCIYLVGMMGSGKTTIG
Sbjct: 61  SVETSCYRENISGLTLETENVRPFDKDLLLKNKSQEVQPHLNGRCIYLVGMMGSGKTTIG 120

Query: 121 KILAKELGYTFSDSDILVEQEVGGTSVAEIFKLHGEVFFRDKETEVLRKLSLMHGFVIST 180
           KILAKEL YTFSDSD LVEQEVGGTSVAEIFKLHGEVFFRDKETEVLRKLS MHGFVIST
Sbjct: 121 KILAKELSYTFSDSDTLVEQEVGGTSVAEIFKLHGEVFFRDKETEVLRKLSSMHGFVIST 180

Query: 181 GGVRVVLFDCRKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTKVVSWVL 240
           GG  VV     KYMQNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTK      
Sbjct: 181 GGGIVVRPINWKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTK------ 240

Query: 241 LIGRSSRELVMLDPNTYLNLLILIQAFRRLSILLEERGDAYANANAKVCLGSLAAKLGLS 300
                                    AFRRLS+LLEERGDAYANANAKVCLG LAA+LG S
Sbjct: 241 -------------------------AFRRLSVLLEERGDAYANANAKVCLGGLAAELGFS 300

Query: 301 DVCNLTPADIAIEVPLFLPHLASFVLAMFALVQIQHFLEQEDDYSTS 348
           DVCNLTPADIAIE                ALVQIQHFLEQED YS S
Sbjct: 301 DVCNLTPADIAIE----------------ALVQIQHFLEQEDGYSKS 300

[Close]

BLAST of Lsi01G010590 vs. NCBI nr
Match: XP_011657796.1 (shikimate kinase 1, chloroplastic [Cucumis sativus] >XP_011657799.1 shikimate kinase 1, chloroplastic [Cucumis sativus] >KGN48438.1 hypothetical protein Csa_003810 [Cucumis sativus])

HSP 1 Score: 508.1 bits (1307), Expect = 6.2e-140
Identity = 271/347 (78.10%), Postives = 280/347 (80.69%), Query Frame = 0


Query: 1   MEANVGHLQHLSNRIDFGTFVRKPSGLVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRTV 60
           ME N GHLQHLS RIDFG  VRKPSG VRFLQPISDQQKLPGLVSAFQQPLRLSNRCRTV
Sbjct: 1   MEVNFGHLQHLSIRIDFGMVVRKPSGSVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRTV 60

Query: 61  SVEASCYRENISGLTLETENFHPFDKDLHLKNKSQEVLPHLNGRCIYLVGMMGSGKTTIG 120
           SVE SCYRENISGLTLETE  HPFDKDL LKNKSQEV PHLNG+CIYLVGMMGSGKTTIG
Sbjct: 61  SVETSCYRENISGLTLETEKSHPFDKDLLLKNKSQEVQPHLNGQCIYLVGMMGSGKTTIG 120

Query: 121 KILAKELGYTFSDSDILVEQEVGGTSVAEIFKLHGEVFFRDKETEVLRKLSLMHGFVIST 180
           KILAKELGYTFSDSD LVEQEVGGTSVA+IFKLHGEVFFRDKETEVLRKLSLMHGFVIST
Sbjct: 121 KILAKELGYTFSDSDTLVEQEVGGTSVADIFKLHGEVFFRDKETEVLRKLSLMHGFVIST 180

Query: 181 GGVRVVLFDCRKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTKVVSWVL 240
           GG  VV     KYM+NGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTK      
Sbjct: 181 GGGIVVRPINWKYMRNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTK------ 240

Query: 241 LIGRSSRELVMLDPNTYLNLLILIQAFRRLSILLEERGDAYANANAKVCLGSLAAKLGLS 300
                                    AFRRLS+LLEERGDAYANANAKVCLGSLA KLGLS
Sbjct: 241 -------------------------AFRRLSVLLEERGDAYANANAKVCLGSLADKLGLS 300

Query: 301 DVCNLTPADIAIEVPLFLPHLASFVLAMFALVQIQHFLEQEDDYSTS 348
           DVCNLTPADIA+E                ALVQIQ+FLEQE+DY+T+
Sbjct: 301 DVCNLTPADIAVE----------------ALVQIQNFLEQENDYATT 300

[Close]

BLAST of Lsi01G010590 vs. NCBI nr
Match: XP_008440145.1 (PREDICTED: shikimate kinase 1, chloroplastic [Cucumis melo])

HSP 1 Score: 503.1 bits (1294), Expect = 2.0e-138
Identity = 269/347 (77.52%), Postives = 280/347 (80.69%), Query Frame = 0


Query: 1   MEANVGHLQHLSNRIDFGTFVRKPSGLVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRTV 60
           MEAN GHLQHLS RIDFGT VRKPSG VRFLQPISD+QKLPGLVSAFQQPLRLSNRCRTV
Sbjct: 1   MEANFGHLQHLSIRIDFGTVVRKPSGSVRFLQPISDRQKLPGLVSAFQQPLRLSNRCRTV 60

Query: 61  SVEASCYRENISGLTLETENFHPFDKDLHLKNKSQEVLPHLNGRCIYLVGMMGSGKTTIG 120
           SVE SCYRENIS LTLETE FHPFDKDL LKNKSQEV P LNGRCIYLVGMMGSGKTTIG
Sbjct: 61  SVETSCYRENISDLTLETEIFHPFDKDLLLKNKSQEVRPLLNGRCIYLVGMMGSGKTTIG 120

Query: 121 KILAKELGYTFSDSDILVEQEVGGTSVAEIFKLHGEVFFRDKETEVLRKLSLMHGFVIST 180
           KILA+ELGYTFSDSD LVEQ+VGGTSVA+IFKLHGEVFFRDKETEVL+KLSLMHGFVIST
Sbjct: 121 KILARELGYTFSDSDTLVEQDVGGTSVADIFKLHGEVFFRDKETEVLKKLSLMHGFVIST 180

Query: 181 GGVRVVLFDCRKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTKVVSWVL 240
           GG  VV     KYM+NGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAY K      
Sbjct: 181 GGGIVVRPINWKYMRNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYMK------ 240

Query: 241 LIGRSSRELVMLDPNTYLNLLILIQAFRRLSILLEERGDAYANANAKVCLGSLAAKLGLS 300
                                    AFRRLS+LLEERGDAYANANAKVCLGSLA KLGLS
Sbjct: 241 -------------------------AFRRLSVLLEERGDAYANANAKVCLGSLADKLGLS 300

Query: 301 DVCNLTPADIAIEVPLFLPHLASFVLAMFALVQIQHFLEQEDDYSTS 348
           DVCNLTPADIAIE                ALVQI+HFLEQ+DDY+T+
Sbjct: 301 DVCNLTPADIAIE----------------ALVQIRHFLEQKDDYATT 300

[Close]

BLAST of Lsi01G010590 vs. NCBI nr
Match: XP_022950653.1 (shikimate kinase 1, chloroplastic-like [Cucurbita moschata] >XP_022950654.1 shikimate kinase 1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 486.5 bits (1251), Expect = 1.9e-133
Identity = 266/347 (76.66%), Postives = 270/347 (77.81%), Query Frame = 0


Query: 1   MEANVGHLQHLSNRIDFGTFVRKPSGLVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRTV 60
           MEAN+GHLQ+LS RID G FV KPSG VRFLQPISDQ K   LVSAFQQPLRL NRCRTV
Sbjct: 1   MEANLGHLQYLSIRIDSGMFVTKPSGSVRFLQPISDQHKPLPLVSAFQQPLRLPNRCRTV 60

Query: 61  SVEASCYRENISGLTLETENFHPFDKDLHLKNKSQEVLPHLNGRCIYLVGMMGSGKTTIG 120
           S  ASCYRENISGLTLETENFHPFD+DL LKNKS EV PHLNGRCIYLVGMMGSGKTTIG
Sbjct: 61  SFGASCYRENISGLTLETENFHPFDEDLLLKNKSHEVQPHLNGRCIYLVGMMGSGKTTIG 120

Query: 121 KILAKELGYTFSDSDILVEQEVGGTSVAEIFKLHGEVFFRDKETEVLRKLSLMHGFVIST 180
           KILAKEL YTFSDSD LVEQEVGGTSVAEIFKLHGE FFRDKETEVLRKLSLMHGFVIST
Sbjct: 121 KILAKELSYTFSDSDTLVEQEVGGTSVAEIFKLHGEGFFRDKETEVLRKLSLMHGFVIST 180

Query: 181 GGVRVVLFDCRKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTKVVSWVL 240
           GG  VV     KYMQ GISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTK      
Sbjct: 181 GGGIVVRPINWKYMQKGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTK------ 240

Query: 241 LIGRSSRELVMLDPNTYLNLLILIQAFRRLSILLEERGDAYANANAKVCLGSLAAKLGLS 300
                                    AFRRLSIL EERGDAY NANAKVCLGSLAAKLGLS
Sbjct: 241 -------------------------AFRRLSILQEERGDAYTNANAKVCLGSLAAKLGLS 300

Query: 301 DVCNLTPADIAIEVPLFLPHLASFVLAMFALVQIQHFLEQEDDYSTS 348
           DVCNLTPADIA+E                ALVQIQ FLEQED YSTS
Sbjct: 301 DVCNLTPADIALE----------------ALVQIQTFLEQEDGYSTS 300

[Close]

BLAST of Lsi01G010590 vs. NCBI nr
Match: XP_022977943.1 (shikimate kinase 1, chloroplastic-like [Cucurbita maxima] >XP_022977944.1 shikimate kinase 1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 486.5 bits (1251), Expect = 1.9e-133
Identity = 266/347 (76.66%), Postives = 269/347 (77.52%), Query Frame = 0


Query: 1   MEANVGHLQHLSNRIDFGTFVRKPSGLVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRTV 60
           MEAN+GHLQ+LS RID G FV KPSG VRFLQPISDQ K   LVSAFQQPLRL NRCRTV
Sbjct: 1   MEANLGHLQYLSVRIDSGMFVTKPSGSVRFLQPISDQHKPLPLVSAFQQPLRLPNRCRTV 60

Query: 61  SVEASCYRENISGLTLETENFHPFDKDLHLKNKSQEVLPHLNGRCIYLVGMMGSGKTTIG 120
           S  ASCYRENISGLTLETENFHPFDKDL LKNKS EV PHLNGRCIYLVGMMGSGKTTIG
Sbjct: 61  SFGASCYRENISGLTLETENFHPFDKDLLLKNKSHEVQPHLNGRCIYLVGMMGSGKTTIG 120

Query: 121 KILAKELGYTFSDSDILVEQEVGGTSVAEIFKLHGEVFFRDKETEVLRKLSLMHGFVIST 180
           KILAKEL YTFSDSD LVEQEVGGTSVAEIFKLHGE FFRDKETEVLRKLSLMHGFVIST
Sbjct: 121 KILAKELSYTFSDSDTLVEQEVGGTSVAEIFKLHGEGFFRDKETEVLRKLSLMHGFVIST 180

Query: 181 GGVRVVLFDCRKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTKVVSWVL 240
           GG  VV     KYMQ GISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTK      
Sbjct: 181 GGGIVVRPINWKYMQKGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTK------ 240

Query: 241 LIGRSSRELVMLDPNTYLNLLILIQAFRRLSILLEERGDAYANANAKVCLGSLAAKLGLS 300
                                    AFRRLSIL EERGDAY NANAKVCLGSLAAKLG S
Sbjct: 241 -------------------------AFRRLSILQEERGDAYTNANAKVCLGSLAAKLGFS 300

Query: 301 DVCNLTPADIAIEVPLFLPHLASFVLAMFALVQIQHFLEQEDDYSTS 348
           DVCNLTPADIA+E                ALVQIQ FLEQED YSTS
Sbjct: 301 DVCNLTPADIALE----------------ALVQIQTFLEQEDGYSTS 300

[Close]

BLAST of Lsi01G010590 vs. TAIR 10
Match: AT2G21940.4 (shikimate kinase 1 )

HSP 1 Score: 272.7 bits (696), Expect = 4.1e-73
Identity = 162/343 (47.23%), Postives = 207/343 (60.35%), Query Frame = 0


Query: 1   MEANVGHLQHLSNRIDFGTFVRKPS-GLVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRT 60
           MEA +       + +D      KP  G +R+ Q +   ++  GL  A  QP R +++ R 
Sbjct: 1   MEAAITQRIQYPSWVDCRKVECKPQRGSLRYSQQVKVDRRFRGLSLARLQPERRNDQRRA 60

Query: 61  VSVEASCYRENISGLTLETENFHPFDKDLHLKNKSQEVLPHLNGRCIYLVGMMGSGKTTI 120
           VS   SC   N SG  LET + +PFD+D+ LK K++EV P+LNGR +YLVGMMGSGKTT+
Sbjct: 61  VSPAVSCSDNNSSGALLETGSVYPFDEDI-LKRKAEEVKPYLNGRSMYLVGMMGSGKTTV 120

Query: 121 GKILAKELGYTFSDSDILVEQEVGGTSVAEIFKLHGEVFFRDKETEVLRKLSLMHGFVIS 180
           GK+++K LGYTF D D L+EQ + GTSVAEIF  HGE FFR KET+ L+KLS  +  V+S
Sbjct: 121 GKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFRGKETDALKKLSSRYQVVVS 180

Query: 181 TGGVRVVLFDCRKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTKVVSWV 240
           TGG  V+     KYM  GISIWLDVPLEALA RIAAVGTDSRPLLH ESG+AY+      
Sbjct: 181 TGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHDESGDAYS------ 240

Query: 241 LLIGRSSRELVMLDPNTYLNLLILIQAFRRLSILLEERGDAYANANAKVCLGSLAAKLGL 300
                                     AF+RLS + +ERG+AY NANA+V L ++AAK G 
Sbjct: 241 -------------------------VAFKRLSAIWDERGEAYTNANARVSLENIAAKRGY 295

Query: 301 SDVCNLTPADIAIEVPLFLPHLASFVLAMFALVQIQHFLEQED 343
            +V +LTP +IAIE                A  Q+  FLE+E+
Sbjct: 301 KNVSDLTPTEIAIE----------------AFEQVLSFLEKEE 295

[Close]

BLAST of Lsi01G010590 vs. TAIR 10
Match: AT2G21940.1 (shikimate kinase 1 )

HSP 1 Score: 268.1 bits (684), Expect = 1.0e-71
Identity = 162/343 (47.23%), Postives = 207/343 (60.35%), Query Frame = 0


Query: 1   MEANVGHLQHLSNRIDFGTFVRKPS-GLVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRT 60
           MEA +       + +D      KP  G +R+ Q +   ++  GL  A  QP R +++ R 
Sbjct: 1   MEAAITQRIQYPSWVDCRKVECKPQRGSLRYSQQVKVDRRFRGLSLARLQPERRNDQRRA 60

Query: 61  VSVEASCYRENISGLTLETENFHPFDKDLHLKNKSQEVLPHLNGRCIYLVGMMGSGKTTI 120
           VS   SC   N S L LET + +PFD+D+ LK K++EV P+LNGR +YLVGMMGSGKTT+
Sbjct: 61  VSPAVSCSDNNSSAL-LETGSVYPFDEDI-LKRKAEEVKPYLNGRSMYLVGMMGSGKTTV 120

Query: 121 GKILAKELGYTFSDSDILVEQEVGGTSVAEIFKLHGEVFFRDKETEVLRKLSLMHGFVIS 180
           GK+++K LGYTF D D L+EQ + GTSVAEIF  HGE FFR KET+ L+KLS  +  V+S
Sbjct: 121 GKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFRGKETDALKKLSSRYQVVVS 180

Query: 181 TGGVRVVLFDCRKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTKVVSWV 240
           TGG  V+     KYM  GISIWLDVPLEALA RIAAVGTDSRPLLH ESG+AY+      
Sbjct: 181 TGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHDESGDAYS------ 240

Query: 241 LLIGRSSRELVMLDPNTYLNLLILIQAFRRLSILLEERGDAYANANAKVCLGSLAAKLGL 300
                                     AF+RLS + +ERG+AY NANA+V L ++AAK G 
Sbjct: 241 -------------------------VAFKRLSAIWDERGEAYTNANARVSLENIAAKRGY 294

Query: 301 SDVCNLTPADIAIEVPLFLPHLASFVLAMFALVQIQHFLEQED 343
            +V +LTP +IAIE                A  Q+  FLE+E+
Sbjct: 301 KNVSDLTPTEIAIE----------------AFEQVLSFLEKEE 294

[Close]

BLAST of Lsi01G010590 vs. TAIR 10
Match: AT2G21940.2 (shikimate kinase 1 )

HSP 1 Score: 268.1 bits (684), Expect = 1.0e-71
Identity = 162/343 (47.23%), Postives = 207/343 (60.35%), Query Frame = 0


Query: 1   MEANVGHLQHLSNRIDFGTFVRKPS-GLVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRT 60
           MEA +       + +D      KP  G +R+ Q +   ++  GL  A  QP R +++ R 
Sbjct: 1   MEAAITQRIQYPSWVDCRKVECKPQRGSLRYSQQVKVDRRFRGLSLARLQPERRNDQRRA 60

Query: 61  VSVEASCYRENISGLTLETENFHPFDKDLHLKNKSQEVLPHLNGRCIYLVGMMGSGKTTI 120
           VS   SC   N S L LET + +PFD+D+ LK K++EV P+LNGR +YLVGMMGSGKTT+
Sbjct: 61  VSPAVSCSDNNSSAL-LETGSVYPFDEDI-LKRKAEEVKPYLNGRSMYLVGMMGSGKTTV 120

Query: 121 GKILAKELGYTFSDSDILVEQEVGGTSVAEIFKLHGEVFFRDKETEVLRKLSLMHGFVIS 180
           GK+++K LGYTF D D L+EQ + GTSVAEIF  HGE FFR KET+ L+KLS  +  V+S
Sbjct: 121 GKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFRGKETDALKKLSSRYQVVVS 180

Query: 181 TGGVRVVLFDCRKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTKVVSWV 240
           TGG  V+     KYM  GISIWLDVPLEALA RIAAVGTDSRPLLH ESG+AY+      
Sbjct: 181 TGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHDESGDAYS------ 240

Query: 241 LLIGRSSRELVMLDPNTYLNLLILIQAFRRLSILLEERGDAYANANAKVCLGSLAAKLGL 300
                                     AF+RLS + +ERG+AY NANA+V L ++AAK G 
Sbjct: 241 -------------------------VAFKRLSAIWDERGEAYTNANARVSLENIAAKRGY 294

Query: 301 SDVCNLTPADIAIEVPLFLPHLASFVLAMFALVQIQHFLEQED 343
            +V +LTP +IAIE                A  Q+  FLE+E+
Sbjct: 301 KNVSDLTPTEIAIE----------------AFEQVLSFLEKEE 294

[Close]

BLAST of Lsi01G010590 vs. TAIR 10
Match: AT2G21940.5 (shikimate kinase 1 )

HSP 1 Score: 268.1 bits (684), Expect = 1.0e-71
Identity = 162/343 (47.23%), Postives = 207/343 (60.35%), Query Frame = 0


Query: 1   MEANVGHLQHLSNRIDFGTFVRKPS-GLVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRT 60
           MEA +       + +D      KP  G +R+ Q +   ++  GL  A  QP R +++ R 
Sbjct: 1   MEAAITQRIQYPSWVDCRKVECKPQRGSLRYSQQVKVDRRFRGLSLARLQPERRNDQRRA 60

Query: 61  VSVEASCYRENISGLTLETENFHPFDKDLHLKNKSQEVLPHLNGRCIYLVGMMGSGKTTI 120
           VS   SC   N S L LET + +PFD+D+ LK K++EV P+LNGR +YLVGMMGSGKTT+
Sbjct: 61  VSPAVSCSDNNSSAL-LETGSVYPFDEDI-LKRKAEEVKPYLNGRSMYLVGMMGSGKTTV 120

Query: 121 GKILAKELGYTFSDSDILVEQEVGGTSVAEIFKLHGEVFFRDKETEVLRKLSLMHGFVIS 180
           GK+++K LGYTF D D L+EQ + GTSVAEIF  HGE FFR KET+ L+KLS  +  V+S
Sbjct: 121 GKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFRGKETDALKKLSSRYQVVVS 180

Query: 181 TGGVRVVLFDCRKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTKVVSWV 240
           TGG  V+     KYM  GISIWLDVPLEALA RIAAVGTDSRPLLH ESG+AY+      
Sbjct: 181 TGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHDESGDAYS------ 240

Query: 241 LLIGRSSRELVMLDPNTYLNLLILIQAFRRLSILLEERGDAYANANAKVCLGSLAAKLGL 300
                                     AF+RLS + +ERG+AY NANA+V L ++AAK G 
Sbjct: 241 -------------------------VAFKRLSAIWDERGEAYTNANARVSLENIAAKRGY 294

Query: 301 SDVCNLTPADIAIEVPLFLPHLASFVLAMFALVQIQHFLEQED 343
            +V +LTP +IAIE                A  Q+  FLE+E+
Sbjct: 301 KNVSDLTPTEIAIE----------------AFEQVLSFLEKEE 294

[Close]

BLAST of Lsi01G010590 vs. TAIR 10
Match: AT2G21940.3 (shikimate kinase 1 )

HSP 1 Score: 249.6 bits (636), Expect = 3.7e-66
Identity = 147/303 (48.51%), Postives = 188/303 (62.05%), Query Frame = 0


Query: 1   MEANVGHLQHLSNRIDFGTFVRKPS-GLVRFLQPISDQQKLPGLVSAFQQPLRLSNRCRT 60
           MEA +       + +D      KP  G +R+ Q +   ++  GL  A  QP R +++ R 
Sbjct: 1   MEAAITQRIQYPSWVDCRKVECKPQRGSLRYSQQVKVDRRFRGLSLARLQPERRNDQRRA 60

Query: 61  VSVEASCYRENISGLTLETENFHPFDKDLHLKNKSQEVLPHLNGRCIYLVGMMGSGKTTI 120
           VS   SC   N S L LET + +PFD+D+ LK K++EV P+LNGR +YLVGMMGSGKTT+
Sbjct: 61  VSPAVSCSDNNSSAL-LETGSVYPFDEDI-LKRKAEEVKPYLNGRSMYLVGMMGSGKTTV 120

Query: 121 GKILAKELGYTFSDSDILVEQEVGGTSVAEIFKLHGEVFFRDKETEVLRKLSLMHGFVIS 180
           GK+++K LGYTF D D L+EQ + GTSVAEIF  HGE FFR KET+ L+KLS  +  V+S
Sbjct: 121 GKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFRGKETDALKKLSSRYQVVVS 180

Query: 181 TGGVRVVLFDCRKYMQNGISIWLDVPLEALAKRIAAVGTDSRPLLHHESGNAYTKVVSWV 240
           TGG  V+     KYM  GISIWLDVPLEALA RIAAVGTDSRPLLH ESG+AY+      
Sbjct: 181 TGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHDESGDAYS------ 240

Query: 241 LLIGRSSRELVMLDPNTYLNLLILIQAFRRLSILLEERGDAYANANAKVCLGSLAAKLGL 300
                                     AF+RLS + +ERG+AY NANA+V L S+++   L
Sbjct: 241 -------------------------VAFKRLSAIWDERGEAYTNANARVSLESMSSSSIL 270

Query: 301 SDV 303
           S +
Sbjct: 301 SAI 270

The following BLAST results are available for this feature:

BLAST of Lsi01G010590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJ05	1.4e-70	47.23	Shikimate kinase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SK1 PE=1 SV...	[more]
Q00497	5.9e-69	45.03	Shikimate kinase, chloroplastic OS=Solanum lycopersicum OX=4081 GN=SK PE=1 SV=1	[more]
Q8GY88	5.0e-60	45.11	Shikimate kinase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SK2 PE=1 SV...	[more]
Q7X7H9	8.6e-60	49.45	Shikimate kinase 3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SK...	[more]
Q5NTH4	8.0e-58	54.15	Shikimate kinase 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SK...	[more]

BLAST of Lsi01G010590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFZ0	3.0e-140	78.10	Shikimate kinase OS=Cucumis sativus OX=3659 GN=Csa_6G487590 PE=3 SV=1	[more]
A0A1S3B0E4	9.6e-139	77.52	Shikimate kinase OS=Cucumis melo OX=3656 GN=LOC103484699 PE=3 SV=1	[more]
A0A6J1IRL7	9.3e-134	76.66	Shikimate kinase OS=Cucurbita maxima OX=3661 GN=LOC111478085 PE=3 SV=1	[more]
A0A6J1GFH0	9.3e-134	76.66	Shikimate kinase OS=Cucurbita moschata OX=3662 GN=LOC111453690 PE=3 SV=1	[more]
A0A6J1KYG4	3.5e-133	75.50	Shikimate kinase OS=Cucurbita maxima OX=3661 GN=LOC111497498 PE=3 SV=1	[more]

BLAST of Lsi01G010590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880852.1	3.9e-142	79.54	shikimate kinase 1, chloroplastic [Benincasa hispida]	[more]
XP_011657796.1	6.2e-140	78.10	shikimate kinase 1, chloroplastic [Cucumis sativus] >XP_011657799.1 shikimate ki...	[more]
XP_008440145.1	2.0e-138	77.52	PREDICTED: shikimate kinase 1, chloroplastic [Cucumis melo]	[more]
XP_022950653.1	1.9e-133	76.66	shikimate kinase 1, chloroplastic-like [Cucurbita moschata] >XP_022950654.1 shik...	[more]
XP_022977943.1	1.9e-133	76.66	shikimate kinase 1, chloroplastic-like [Cucurbita maxima] >XP_022977944.1 shikim...	[more]

BLAST of Lsi01G010590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21940.4	4.1e-73	47.23	shikimate kinase 1	[more]
AT2G21940.1	1.0e-71	47.23	shikimate kinase 1	[more]
AT2G21940.2	1.0e-71	47.23	shikimate kinase 1	[more]
AT2G21940.5	1.0e-71	47.23	shikimate kinase 1	[more]
AT2G21940.3	3.7e-66	48.51	shikimate kinase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01100	SHIKIMTKNASE	coord: 197..214 score: 32.05 coord: 177..186 score: 53.85 coord: 106..121 score: 59.62 coord: 159..167 score: 56.41 coord: 130..143 score: 37.36
None	No IPR available	PANTHER	PTHR21087	SHIKIMATE KINASE	coord: 54..344
None	No IPR available	PANTHER	PTHR21087:SF16	SHIKIMATE KINASE 1, CHLOROPLASTIC	coord: 54..344
IPR031322	Shikimate kinase/gluconokinase	PFAM	PF01202	SKI	coord: 112..229 e-value: 2.5E-37 score: 128.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 88..317 e-value: 1.1E-54 score: 187.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 104..221
IPR000623	Shikimate kinase/Threonine synthase-like 1	HAMAP	MF_00109	Shikimate_kinase	coord: 103..319 score: 22.247746
IPR000623	Shikimate kinase/Threonine synthase-like 1	CDD	cd00464	SK	coord: 106..235 e-value: 3.14716E-47 score: 155.406

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G010590.1	Lsi01G010590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008652	cellular amino acid biosynthetic process
biological_process	GO:0009423	chorismate biosynthetic process
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004765	shikimate kinase activity