Lsi01G010520 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G010520
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	elongation of fatty acids protein 3-like
Location	chr01: 8715690 .. 8716628 (+)
RNA-Seq Expression	Lsi01G010520
Synteny	Lsi01G010520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGCCCGGAATCATCCCCATCAACGACTTCACCTACTGGCTGTCGGAGCACCCCTCCATCGTCGGATTCCGGTGGAGCCACACCCATTCATGGGGTTCCACTTGGTCCTTCCTCTTCTCTTCCATCGCCTTTTACCTCGCCTTCTCCACCACCGTCCACCTCTTCCTCAGCCTCCTCCTCCGCCCCGGCCGCCCTGTCCCTCTCGGTCCCATTCCAGCCATCCATTGCCTCTCCATGGCCCTAATCTCCACCCTAATCTCCGCCGGTATCCTCCTCTCCTCCGCTGCCGAGATCCGCGACACCCGATGGTTCTGGCGCCGGTCCAAAACCCCCTTCCAATGGCTCCTCTGTTTCCCCTTAGGCACTCGTCCTTCAGGACGCGTCTTCTTCTGGTCCTACATCTATTATTTGTCGCGATTCTTCCATATGTTCCGTACCATTTTCACCATTCTTCGCAGTCGGAGACTCTCCTTCTTCCAGCTCTTCAACCACTCGATCTCCACGTTTATGTCGTTCCTCTGGCTTGAATTTTCTCAGTCGTTTCAGGTTCTGGCGATTCTCTCGACTTCGGTGGTGTACGCGGTGGTTTACGGCTACAGATTCTGGACGGCGATTGGATTGCGAAGAGCTTGTTTCCCTTTTGTGGTGAATTGCCAATTCGTTCTGTTGGGTTGTAATTTAGCCTGCCATGTGGGTGTTTTGATGCTTCACTTCATGAAAGGCGGATGCAATGGAATTGGAGCTTGGAGTTTCAATTCTGTTCTCAACGGAGCCATTTTACTGCTTTTCCTCAACTTCTATCTCAAAATTCATCTGGGGAAAACAGAGGATTCTGTGAAGATCATAAAACACCAACAACCCTGTTCTGGAAATTTAGAGAATCAATCTCTGGTACGACTGTCCAAGGCCGAGAATTTCAAAGAGAAGTATTATTAA

mRNA sequence

ATGTCGCCCGGAATCATCCCCATCAACGACTTCACCTACTGGCTGTCGGAGCACCCCTCCATCGTCGGATTCCGGTGGAGCCACACCCATTCATGGGGTTCCACTTGGTCCTTCCTCTTCTCTTCCATCGCCTTTTACCTCGCCTTCTCCACCACCGTCCACCTCTTCCTCAGCCTCCTCCTCCGCCCCGGCCGCCCTGTCCCTCTCGGTCCCATTCCAGCCATCCATTGCCTCTCCATGGCCCTAATCTCCACCCTAATCTCCGCCGGTATCCTCCTCTCCTCCGCTGCCGAGATCCGCGACACCCGATGGTTCTGGCGCCGGTCCAAAACCCCCTTCCAATGGCTCCTCTGTTTCCCCTTAGGCACTCGTCCTTCAGGACGCGTCTTCTTCTGGTCCTACATCTATTATTTGTCGCGATTCTTCCATATGTTCCGTACCATTTTCACCATTCTTCGCAGTCGGAGACTCTCCTTCTTCCAGCTCTTCAACCACTCGATCTCCACGTTTATGTCGTTCCTCTGGCTTGAATTTTCTCAGTCGTTTCAGGTTCTGGCGATTCTCTCGACTTCGGTGGTGTACGCGGTGGTTTACGGCTACAGATTCTGGACGGCGATTGGATTGCGAAGAGCTTGTTTCCCTTTTGTGGTGAATTGCCAATTCGTTCTGTTGGGTTGTAATTTAGCCTGCCATGTGGGTGTTTTGATGCTTCACTTCATGAAAGGCGGATGCAATGGAATTGGAGCTTGGAGTTTCAATTCTGTTCTCAACGGAGCCATTTTACTGCTTTTCCTCAACTTCTATCTCAAAATTCATCTGGGGAAAACAGAGGATTCTGTGAAGATCATAAAACACCAACAACCCTGTTCTGGAAATTTAGAGAATCAATCTCTGGTACGACTGTCCAAGGCCGAGAATTTCAAAGAGAAGTATTATTAA

Coding sequence (CDS)

ATGTCGCCCGGAATCATCCCCATCAACGACTTCACCTACTGGCTGTCGGAGCACCCCTCCATCGTCGGATTCCGGTGGAGCCACACCCATTCATGGGGTTCCACTTGGTCCTTCCTCTTCTCTTCCATCGCCTTTTACCTCGCCTTCTCCACCACCGTCCACCTCTTCCTCAGCCTCCTCCTCCGCCCCGGCCGCCCTGTCCCTCTCGGTCCCATTCCAGCCATCCATTGCCTCTCCATGGCCCTAATCTCCACCCTAATCTCCGCCGGTATCCTCCTCTCCTCCGCTGCCGAGATCCGCGACACCCGATGGTTCTGGCGCCGGTCCAAAACCCCCTTCCAATGGCTCCTCTGTTTCCCCTTAGGCACTCGTCCTTCAGGACGCGTCTTCTTCTGGTCCTACATCTATTATTTGTCGCGATTCTTCCATATGTTCCGTACCATTTTCACCATTCTTCGCAGTCGGAGACTCTCCTTCTTCCAGCTCTTCAACCACTCGATCTCCACGTTTATGTCGTTCCTCTGGCTTGAATTTTCTCAGTCGTTTCAGGTTCTGGCGATTCTCTCGACTTCGGTGGTGTACGCGGTGGTTTACGGCTACAGATTCTGGACGGCGATTGGATTGCGAAGAGCTTGTTTCCCTTTTGTGGTGAATTGCCAATTCGTTCTGTTGGGTTGTAATTTAGCCTGCCATGTGGGTGTTTTGATGCTTCACTTCATGAAAGGCGGATGCAATGGAATTGGAGCTTGGAGTTTCAATTCTGTTCTCAACGGAGCCATTTTACTGCTTTTCCTCAACTTCTATCTCAAAATTCATCTGGGGAAAACAGAGGATTCTGTGAAGATCATAAAACACCAACAACCCTGTTCTGGAAATTTAGAGAATCAATCTCTGGTACGACTGTCCAAGGCCGAGAATTTCAAAGAGAAGTATTATTAA

Protein sequence

MSPGIIPINDFTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFSTTVHLFLSLLLRPGRPVPLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKTPFQWLLCFPLGTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRSRRLSFFQLFNHSISTFMSFLWLEFSQSFQVLAILSTSVVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFMKGGCNGIGAWSFNSVLNGAILLLFLNFYLKIHLGKTEDSVKIIKHQQPCSGNLENQSLVRLSKAENFKEKYY

Homology

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BLAST of Lsi01G010520 vs. ExPASy Swiss-Prot
Match: Q9SYY4 (Elongation of fatty acids protein 3-like OS=Arabidopsis thaliana OX=3702 GN=HOS3 PE=2 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 2.7e-105
Identity = 189/268 (70.52%), Postives = 222/268 (82.84%), Query Frame = 0


Query: 8   INDFTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFSTTVHLFLSLLLRPGRPV 67
           IN  TY+LSEHP IVGFRWS++ SWGSTWSFLF+SI+ Y+A S+++H+ LS + R  R V
Sbjct: 6   INSITYFLSEHPYIVGFRWSNSQSWGSTWSFLFTSISLYIAVSSSLHILLSAVRRSNRSV 65

Query: 68  PLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSK--TPFQWLLCFPLGTRP 127
           PLG IP IH L M+++S  I AGILLS+AAEIRDTRW WRRSK  TP QWLLCFPLGTRP
Sbjct: 66  PLGHIPEIHSLLMSILSATIFAGILLSAAAEIRDTRWLWRRSKTATPLQWLLCFPLGTRP 125

Query: 128 SGRVFFWSYIYYLSRFFHMFRTIFTILRSRRLSFFQLFNHSISTFMSFLWLEFSQSFQVL 187
           SGRVFFWSY++YL+RF HMFRTIF +LRSRRL+  QLF +S+  F SFLWLEFSQS+Q+L
Sbjct: 126 SGRVFFWSYVFYLTRFLHMFRTIFAVLRSRRLAVSQLFCNSVMAFTSFLWLEFSQSYQIL 185

Query: 188 AILSTSVVYAVVYGYRFWTAIGLRRACFP-FVVNCQFVLLGCNLACHVGVLMLHFMKGGC 247
           AILST++VY+VVYGYRFWT  GL  + FP FVVNCQ VL+GCNL  H GVL +H  KGGC
Sbjct: 186 AILSTTLVYSVVYGYRFWTGFGLPGSAFPSFVVNCQLVLVGCNLVSHAGVLTMHLFKGGC 245

Query: 248 NGIGAWSFNSVLNGAILLLFLNFYLKIH 273
           NGIGAW  NSVLNGAILLLFLNFY+++H
Sbjct: 246 NGIGAWGLNSVLNGAILLLFLNFYVRMH 273

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BLAST of Lsi01G010520 vs. ExPASy Swiss-Prot
Match: Q86JM5 (Putative elongation of fatty acids protein DDB_G0272012 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0272012 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 4.4e-07
Identity = 63/284 (22.18%), Postives = 118/284 (41.55%), Query Frame = 0


Query: 26  WSHTHSW---------GSTWSFLFSSIAFYLAFSTT-----------VHLFL------SL 85
           WS + SW          S WS LF  + F   F TT           + L+L        
Sbjct: 11  WSDSKSWDHLFQHNFKDSNWSELFDPVNFKFKFGTTPFSQFQILPSVISLYLVIIFSIKF 70

Query: 86  LLRPGRPVPLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKTPFQWLLCF 145
           L+R  +P  L  +  +H   + + S ++  GIL      I         ++ P  + +C 
Sbjct: 71  LMRNRKPFSLKYVSILHNAILCIWSLVMCVGILYEVIKRI--------TAEGPL-FTVCE 130

Query: 146 PLGTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRSRRLSFFQLFNHSISTFMSFLWLEFS 205
            +     G  ++WSYI+Y+S+F+ +  T+  +L+ + L F  +++H I  ++ + ++   
Sbjct: 131 TVSGFDKGPAYYWSYIFYISKFYELLDTVIIVLKKKPLIFLHVYHHCIVVWLCWYFMYSG 190

Query: 206 QSFQVLAILSTSVVYAVVYGYRFWTAIGLR---RACFPFVVNCQFVLLGCNLACHVGVLM 265
            + Q+  +   + V+  +Y + F T  G     +     +   QF+ LG     H   + 
Sbjct: 191 WNLQLWVVFLNTFVHVFMYYFYFQTGRGKTVWWKKYITMIQIIQFICLGIAGLLHSAAIN 250

Query: 266 LHFMKGGC-NGIGAWSFNSVLNGAILLLFLNFYLKIHLGKTEDS 280
           L+     C     A+    ++N + L LF  F++K +  K   S
Sbjct: 251 LN--SSPCFTHYPAFISAYLINFSFLFLFSQFFVKSYSNKPTSS 283

[Close]

BLAST of Lsi01G010520 vs. ExPASy Swiss-Prot
Match: Q54CJ4 (Elongation of fatty acids protein A OS=Dictyostelium discoideum OX=44689 GN=eloA PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 9.2e-05
Identity = 68/270 (25.19%), Postives = 118/270 (43.70%), Query Frame = 0


Query: 24  FRWSHTHSWGSTWSFLFSSIAFYLAFSTTVHLFLSLLLRPGRPVPLGPIPAIHCLSMALI 83
           FRW +  +  S   F       YLA    + +F    ++  + + L      H L + L+
Sbjct: 23  FRWKNEVTPFSNILFPIVCSFGYLALIYGLQIF----MKNKKEIKLHGFAMFHNLFLCLL 82

Query: 84  STLISAGILLSSAAEIRDTRWFWRRSKTPFQW----LLCFPLGTRPSGRVFFWSYIYYLS 143
           S L+  GI++  A             K  F      ++C P+    SG V F  YI+YLS
Sbjct: 83  SLLMFLGIVIPMA-------------KYSFPHGLYNIICKPI---DSGLVQFSYYIFYLS 142

Query: 144 RFFHMFRTIFTILRSRRLSFFQLFNHSISTFMSFLWLEFSQSFQVLAILSTSVVYAVVYG 203
           + +    TI  +LR + L F  +++H I+ ++ +  L++    Q + I +   V+ V+Y 
Sbjct: 143 KVYEFIDTIIQVLRKKSLLFLHVWHHFITLWLVWANLKYDTGCQWVDISANCFVHIVMYF 202

Query: 204 YRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFM-------KGGCNGIGAWS- 263
           Y F T  G+       +  CQ +    +++ H   L  HF           C+G  A S 
Sbjct: 203 YYFQTERGINPWWKKHITTCQIIQFIVDMSSH---LAWHFYDTQGNHNSNYCSGTWATSA 262

Query: 264 FNSVLNGAILLLFLNFYLKIHLGKTEDSVK 282
           F+  +  + L LF+ F++K +  K + S+K
Sbjct: 263 FSDFVILSFLGLFIQFFVKAY--KKKSSIK 267

[Close]

BLAST of Lsi01G010520 vs. ExPASy TrEMBL
Match: A0A1S3B0F3 (elongation of fatty acids protein 3-like OS=Cucumis melo OX=3656 GN=LOC103484706 PE=4 SV=1)

HSP 1 Score: 582.4 bits (1500), Expect = 1.1e-162
Identity = 292/316 (92.41%), Postives = 302/316 (95.57%), Query Frame = 0


Query: 1   MSPGIIPINDFTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFSTTVHLFLSLL 60
           MSPGIIPINDFTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFST +HLFL+LL
Sbjct: 1   MSPGIIPINDFTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFSTALHLFLTLL 60

Query: 61  LRPGRPVPLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKTPFQWLLCFP 120
           LRPGR VPLGPIPAIH LSMALISTLISAGILLSS AEIRDTRWFWRRSKTPFQWLLCFP
Sbjct: 61  LRPGRSVPLGPIPAIHSLSMALISTLISAGILLSSLAEIRDTRWFWRRSKTPFQWLLCFP 120

Query: 121 LGTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRSRRLSFFQLFNHSISTFMSFLWLEFSQ 180
           LGTRPSGRVFFWSYIYYLSRFFHMFRTIFTIL  RRLSFFQLFNHSISTFMSFLWLEFSQ
Sbjct: 121 LGTRPSGRVFFWSYIYYLSRFFHMFRTIFTILLRRRLSFFQLFNHSISTFMSFLWLEFSQ 180

Query: 181 SFQVLAILSTSVVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFM 240
           SFQVLAILSTSVVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVL+LHFM
Sbjct: 181 SFQVLAILSTSVVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLLLHFM 240

Query: 241 KGGCNGIGAWSFNSVLNGAILLLFLNFYLKIHLGKTEDSVKIIK---HQQPCSGNLENQS 300
           KGGCNGIGAWSFNSVLNGAILLLFLNFYLKIHLG TEDSVKIIK   HQ  CSGNL+NQS
Sbjct: 241 KGGCNGIGAWSFNSVLNGAILLLFLNFYLKIHLGDTEDSVKIIKHHHHQPACSGNLKNQS 300

Query: 301 L-VRLSKAENFKEKYY 313
           L  R+S+++NFKEK++
Sbjct: 301 LGRRMSESDNFKEKFH 316

[Close]

BLAST of Lsi01G010520 vs. ExPASy TrEMBL
Match: A0A0A0KL12 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G487670 PE=4 SV=1)

HSP 1 Score: 577.4 bits (1487), Expect = 3.6e-161
Identity = 289/316 (91.46%), Postives = 300/316 (94.94%), Query Frame = 0


Query: 1   MSPGIIPINDFTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFSTTVHLFLSLL 60
           MS GIIPINDFTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLA ST +HLFL+LL
Sbjct: 1   MSSGIIPINDFTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAISTALHLFLTLL 60

Query: 61  LRPGRPVPLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKTPFQWLLCFP 120
           LRPGR VPLGPIPAIH LSMALISTLISAGILLSS AEIRDTRWFWRRSKTPFQWLLCFP
Sbjct: 61  LRPGRSVPLGPIPAIHSLSMALISTLISAGILLSSLAEIRDTRWFWRRSKTPFQWLLCFP 120

Query: 121 LGTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRSRRLSFFQLFNHSISTFMSFLWLEFSQ 180
           LGTRPSGRVFFWSYIYYLSRFFHMFRTIFTIL  RRLSFFQLFNHSISTFMSF+WLEFSQ
Sbjct: 121 LGTRPSGRVFFWSYIYYLSRFFHMFRTIFTILLRRRLSFFQLFNHSISTFMSFMWLEFSQ 180

Query: 181 SFQVLAILSTSVVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFM 240
           SFQVLAILSTSVVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVL+LHFM
Sbjct: 181 SFQVLAILSTSVVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLLLHFM 240

Query: 241 KGGCNGIGAWSFNSVLNGAILLLFLNFYLKIHLGKTEDSVKIIK---HQQPCSGNLENQS 300
           KGGCNGIGAWSFNSVLNGAILLLFLNFYLKIHLG TEDSVKIIK   HQ PCSGNL+NQS
Sbjct: 241 KGGCNGIGAWSFNSVLNGAILLLFLNFYLKIHLGDTEDSVKIIKHHHHQPPCSGNLKNQS 300

Query: 301 L-VRLSKAENFKEKYY 313
           L  R+S+++N KEK++
Sbjct: 301 LGKRMSESQNIKEKFH 316

[Close]

BLAST of Lsi01G010520 vs. ExPASy TrEMBL
Match: A0A6J1HG46 (elongation of fatty acids protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111463259 PE=4 SV=1)

HSP 1 Score: 550.8 bits (1418), Expect = 3.6e-153
Identity = 275/310 (88.71%), Postives = 283/310 (91.29%), Query Frame = 0


Query: 1   MSPGIIPINDFTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFSTTVHLFLSLL 60
           M  GI+PI D TYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSI FYLA S  +HLFLSLL
Sbjct: 1   MKAGIMPITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLALSIAIHLFLSLL 60

Query: 61  LRPGRPVPLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKTPFQWLLCFP 120
           LRPGRPVPLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKTP QWLLCFP
Sbjct: 61  LRPGRPVPLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKTPLQWLLCFP 120

Query: 121 LGTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRSRRLSFFQLFNHSISTFMSFLWLEFSQ 180
           LGTRPSGRVFFWSYIYYLSRFFHMFRTIFTILR R LSFFQLFNHSISTFMSFLWLEFSQ
Sbjct: 121 LGTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRRRELSFFQLFNHSISTFMSFLWLEFSQ 180

Query: 181 SFQVLAILSTSVVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFM 240
           SFQVLAILSTS++YAVVYGYRFWTAIGLRRACFPFV+NCQ  LLGCNLACHVGVLMLHFM
Sbjct: 181 SFQVLAILSTSLLYAVVYGYRFWTAIGLRRACFPFVMNCQIALLGCNLACHVGVLMLHFM 240

Query: 241 KGGCNGIGAWSFNSVLNGAILLLFLNFYLKIHLGKTEDSVKIIKHQQPCSGNLENQSLVR 300
           KGGCNGIGAW FNSVLNGAILLLFLNFYLKIH+GKT+  VKI+K QQPCSGNLE      
Sbjct: 241 KGGCNGIGAWGFNSVLNGAILLLFLNFYLKIHVGKTKSCVKIMK-QQPCSGNLE------ 300

Query: 301 LSKAENFKEK 311
              AEN KEK
Sbjct: 301 ---AENLKEK 300

[Close]

BLAST of Lsi01G010520 vs. ExPASy TrEMBL
Match: A0A6J1KPE4 (elongation of fatty acids protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111497497 PE=4 SV=1)

HSP 1 Score: 547.7 bits (1410), Expect = 3.1e-152
Identity = 270/298 (90.60%), Postives = 280/298 (93.96%), Query Frame = 0


Query: 1   MSPGIIPINDFTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFSTTVHLFLSLL 60
           M  GI+PI D TYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSI FYLAFS  +HLFLSLL
Sbjct: 1   MQAGIMPITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLAFSIAIHLFLSLL 60

Query: 61  LRPGRPVPLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKTPFQWLLCFP 120
           LRPGRPVPLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKTP QWLLCFP
Sbjct: 61  LRPGRPVPLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKTPLQWLLCFP 120

Query: 121 LGTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRSRRLSFFQLFNHSISTFMSFLWLEFSQ 180
           LGTRPSGRVFFWSYIYYLSRFFHMFRTIFTILR R+LSFFQLFNHSISTFMSFLWLEFSQ
Sbjct: 121 LGTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRRRQLSFFQLFNHSISTFMSFLWLEFSQ 180

Query: 181 SFQVLAILSTSVVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFM 240
           SFQVLAILSTS++YAVVYGYRFWTAIGLRRACFPFV+NCQ  LLGCNLACHVGVLMLHFM
Sbjct: 181 SFQVLAILSTSLLYAVVYGYRFWTAIGLRRACFPFVMNCQIALLGCNLACHVGVLMLHFM 240

Query: 241 KGGCNGIGAWSFNSVLNGAILLLFLNFYLKIHLGKTEDSVKIIKHQQPCSGNLENQSL 299
           KGGCNGI AW FNSVLNGAILLLFLNFYLKIH+GKT+  VKI+K QQPCSGNLE + L
Sbjct: 241 KGGCNGIRAWGFNSVLNGAILLLFLNFYLKIHVGKTKSCVKIMK-QQPCSGNLEVEHL 297

[Close]

BLAST of Lsi01G010520 vs. ExPASy TrEMBL
Match: A0A6J1IMF1 (elongation of fatty acids protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111478367 PE=4 SV=1)

HSP 1 Score: 538.1 bits (1385), Expect = 2.4e-149
Identity = 267/289 (92.39%), Postives = 272/289 (94.12%), Query Frame = 0


Query: 8   INDFTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFSTTVHLFLSLLLRPGRPV 67
           I+D  YWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAF+  VHLFLSLLL P R V
Sbjct: 3   IHDLVYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFAVAVHLFLSLLLSPDRTV 62

Query: 68  PLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKTPFQWLLCFPLGTRPSG 127
           PLGPIPAIHCLSMALISTLISAGILLSS AEIRDTRWFWRRSKTPFQWLLCFPLGTRPSG
Sbjct: 63  PLGPIPAIHCLSMALISTLISAGILLSSVAEIRDTRWFWRRSKTPFQWLLCFPLGTRPSG 122

Query: 128 RVFFWSYIYYLSRFFHMFRTIFTILRSRRLSFFQLFNHSISTFMSFLWLEFSQSFQVLAI 187
           RVFFWSYIYYLSRFFHMFRTIFTI   RRLS FQLFNHSISTFMSFLWLEFSQSFQVLAI
Sbjct: 123 RVFFWSYIYYLSRFFHMFRTIFTIFGHRRLSSFQLFNHSISTFMSFLWLEFSQSFQVLAI 182

Query: 188 LSTSVVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFMKGGCNGI 247
           LSTS+VYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFMKGGCNGI
Sbjct: 183 LSTSLVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFMKGGCNGI 242

Query: 248 GAWSFNSVLNGAILLLFLNFYLKIHLGKTEDSVKIIKHQQPCSGNLENQ 297
           GAW FNSVLNGAILLLFLNFYLKIHLGKT++SVKIIKH    SGNLENQ
Sbjct: 243 GAWVFNSVLNGAILLLFLNFYLKIHLGKTQESVKIIKHHPCSSGNLENQ 291

[Close]

BLAST of Lsi01G010520 vs. NCBI nr
Match: XP_038880984.1 (elongation of fatty acids protein 3-like [Benincasa hispida])

HSP 1 Score: 598.2 bits (1541), Expect = 4.1e-167
Identity = 297/314 (94.59%), Postives = 304/314 (96.82%), Query Frame = 0


Query: 1   MSPGIIP--INDFTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFSTTVHLFLS 60
           MSPGIIP  INDFTYWLSEHP+IVGFRWSHTHSWGSTWSFLFSSIAFYLAFST VHLFLS
Sbjct: 1   MSPGIIPININDFTYWLSEHPAIVGFRWSHTHSWGSTWSFLFSSIAFYLAFSTAVHLFLS 60

Query: 61  LLLRPGRPVPLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKTPFQWLLC 120
           LLLRPGRPVPLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKTPFQWLLC
Sbjct: 61  LLLRPGRPVPLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKTPFQWLLC 120

Query: 121 FPLGTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRSRRLSFFQLFNHSISTFMSFLWLEF 180
           FPLGTRPSGRVFFWSYIYYLSRFFHMFRTIFTILR RRLSFFQLFNHSISTFMSFLWLEF
Sbjct: 121 FPLGTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRRRRLSFFQLFNHSISTFMSFLWLEF 180

Query: 181 SQSFQVLAILSTSVVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLH 240
           SQSFQVLAILSTSVVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVL+LH
Sbjct: 181 SQSFQVLAILSTSVVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLLLH 240

Query: 241 FMKGGCNGIGAWSFNSVLNGAILLLFLNFYLKIHLGKTEDSVKIIKHQQPCSGNLENQSL 300
           FMKGGCNGIGAWS NSVLNGAILLLFLNFYLKIHLGKTEDS+KIIK  QPC GNLENQSL
Sbjct: 241 FMKGGCNGIGAWSLNSVLNGAILLLFLNFYLKIHLGKTEDSMKIIKPHQPCYGNLENQSL 300

Query: 301 VRLSKAENFKEKYY 313
            R+S+ ENFK+KY+
Sbjct: 301 GRVSEPENFKDKYH 314

[Close]

BLAST of Lsi01G010520 vs. NCBI nr
Match: XP_008440157.1 (PREDICTED: elongation of fatty acids protein 3-like [Cucumis melo])

HSP 1 Score: 582.4 bits (1500), Expect = 2.3e-162
Identity = 292/316 (92.41%), Postives = 302/316 (95.57%), Query Frame = 0


Query: 1   MSPGIIPINDFTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFSTTVHLFLSLL 60
           MSPGIIPINDFTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFST +HLFL+LL
Sbjct: 1   MSPGIIPINDFTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFSTALHLFLTLL 60

Query: 61  LRPGRPVPLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKTPFQWLLCFP 120
           LRPGR VPLGPIPAIH LSMALISTLISAGILLSS AEIRDTRWFWRRSKTPFQWLLCFP
Sbjct: 61  LRPGRSVPLGPIPAIHSLSMALISTLISAGILLSSLAEIRDTRWFWRRSKTPFQWLLCFP 120

Query: 121 LGTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRSRRLSFFQLFNHSISTFMSFLWLEFSQ 180
           LGTRPSGRVFFWSYIYYLSRFFHMFRTIFTIL  RRLSFFQLFNHSISTFMSFLWLEFSQ
Sbjct: 121 LGTRPSGRVFFWSYIYYLSRFFHMFRTIFTILLRRRLSFFQLFNHSISTFMSFLWLEFSQ 180

Query: 181 SFQVLAILSTSVVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFM 240
           SFQVLAILSTSVVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVL+LHFM
Sbjct: 181 SFQVLAILSTSVVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLLLHFM 240

Query: 241 KGGCNGIGAWSFNSVLNGAILLLFLNFYLKIHLGKTEDSVKIIK---HQQPCSGNLENQS 300
           KGGCNGIGAWSFNSVLNGAILLLFLNFYLKIHLG TEDSVKIIK   HQ  CSGNL+NQS
Sbjct: 241 KGGCNGIGAWSFNSVLNGAILLLFLNFYLKIHLGDTEDSVKIIKHHHHQPACSGNLKNQS 300

Query: 301 L-VRLSKAENFKEKYY 313
           L  R+S+++NFKEK++
Sbjct: 301 LGRRMSESDNFKEKFH 316

[Close]

BLAST of Lsi01G010520 vs. NCBI nr
Match: XP_031744113.1 (elongation of fatty acids protein 3-like [Cucumis sativus] >XP_031744114.1 elongation of fatty acids protein 3-like [Cucumis sativus] >KGN48446.1 hypothetical protein Csa_004078 [Cucumis sativus])

HSP 1 Score: 577.4 bits (1487), Expect = 7.4e-161
Identity = 289/316 (91.46%), Postives = 300/316 (94.94%), Query Frame = 0


Query: 1   MSPGIIPINDFTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFSTTVHLFLSLL 60
           MS GIIPINDFTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLA ST +HLFL+LL
Sbjct: 1   MSSGIIPINDFTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAISTALHLFLTLL 60

Query: 61  LRPGRPVPLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKTPFQWLLCFP 120
           LRPGR VPLGPIPAIH LSMALISTLISAGILLSS AEIRDTRWFWRRSKTPFQWLLCFP
Sbjct: 61  LRPGRSVPLGPIPAIHSLSMALISTLISAGILLSSLAEIRDTRWFWRRSKTPFQWLLCFP 120

Query: 121 LGTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRSRRLSFFQLFNHSISTFMSFLWLEFSQ 180
           LGTRPSGRVFFWSYIYYLSRFFHMFRTIFTIL  RRLSFFQLFNHSISTFMSF+WLEFSQ
Sbjct: 121 LGTRPSGRVFFWSYIYYLSRFFHMFRTIFTILLRRRLSFFQLFNHSISTFMSFMWLEFSQ 180

Query: 181 SFQVLAILSTSVVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFM 240
           SFQVLAILSTSVVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVL+LHFM
Sbjct: 181 SFQVLAILSTSVVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLLLHFM 240

Query: 241 KGGCNGIGAWSFNSVLNGAILLLFLNFYLKIHLGKTEDSVKIIK---HQQPCSGNLENQS 300
           KGGCNGIGAWSFNSVLNGAILLLFLNFYLKIHLG TEDSVKIIK   HQ PCSGNL+NQS
Sbjct: 241 KGGCNGIGAWSFNSVLNGAILLLFLNFYLKIHLGDTEDSVKIIKHHHHQPPCSGNLKNQS 300

Query: 301 L-VRLSKAENFKEKYY 313
           L  R+S+++N KEK++
Sbjct: 301 LGKRMSESQNIKEKFH 316

[Close]

BLAST of Lsi01G010520 vs. NCBI nr
Match: XP_023518252.1 (elongation of fatty acids protein 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 552.4 bits (1422), Expect = 2.6e-153
Identity = 271/298 (90.94%), Postives = 281/298 (94.30%), Query Frame = 0


Query: 1   MSPGIIPINDFTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFSTTVHLFLSLL 60
           M  GI+PI D TYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSI FYLAFS  +HLFLSLL
Sbjct: 1   MKAGIMPITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLAFSIAIHLFLSLL 60

Query: 61  LRPGRPVPLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKTPFQWLLCFP 120
           LRPGRPVPLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKTP QWLLCFP
Sbjct: 61  LRPGRPVPLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKTPLQWLLCFP 120

Query: 121 LGTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRSRRLSFFQLFNHSISTFMSFLWLEFSQ 180
           LGTRPSGRVFFWSYIYYLSRFFHMFRTIFTILR R LSFFQLFNHSISTFMSFLWLEFSQ
Sbjct: 121 LGTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRRRELSFFQLFNHSISTFMSFLWLEFSQ 180

Query: 181 SFQVLAILSTSVVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFM 240
           SFQVLAILSTS++YAVVYGYRFWTAIGLRRACFPFV+NCQ  LLGCNLACHVGVLMLHFM
Sbjct: 181 SFQVLAILSTSLLYAVVYGYRFWTAIGLRRACFPFVMNCQIALLGCNLACHVGVLMLHFM 240

Query: 241 KGGCNGIGAWSFNSVLNGAILLLFLNFYLKIHLGKTEDSVKIIKHQQPCSGNLENQSL 299
           KGGCNGIGAW FNSVLNGAILLLFLNFYLKIH+GKT+  VKI+K QQPCSGNLE ++L
Sbjct: 241 KGGCNGIGAWGFNSVLNGAILLLFLNFYLKIHVGKTKSCVKIMK-QQPCSGNLEGENL 297

[Close]

BLAST of Lsi01G010520 vs. NCBI nr
Match: XP_022962893.1 (elongation of fatty acids protein 3-like [Cucurbita moschata])

HSP 1 Score: 550.8 bits (1418), Expect = 7.4e-153
Identity = 275/310 (88.71%), Postives = 283/310 (91.29%), Query Frame = 0


Query: 1   MSPGIIPINDFTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFSTTVHLFLSLL 60
           M  GI+PI D TYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSI FYLA S  +HLFLSLL
Sbjct: 1   MKAGIMPITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLALSIAIHLFLSLL 60

Query: 61  LRPGRPVPLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKTPFQWLLCFP 120
           LRPGRPVPLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKTP QWLLCFP
Sbjct: 61  LRPGRPVPLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKTPLQWLLCFP 120

Query: 121 LGTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRSRRLSFFQLFNHSISTFMSFLWLEFSQ 180
           LGTRPSGRVFFWSYIYYLSRFFHMFRTIFTILR R LSFFQLFNHSISTFMSFLWLEFSQ
Sbjct: 121 LGTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRRRELSFFQLFNHSISTFMSFLWLEFSQ 180

Query: 181 SFQVLAILSTSVVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFM 240
           SFQVLAILSTS++YAVVYGYRFWTAIGLRRACFPFV+NCQ  LLGCNLACHVGVLMLHFM
Sbjct: 181 SFQVLAILSTSLLYAVVYGYRFWTAIGLRRACFPFVMNCQIALLGCNLACHVGVLMLHFM 240

Query: 241 KGGCNGIGAWSFNSVLNGAILLLFLNFYLKIHLGKTEDSVKIIKHQQPCSGNLENQSLVR 300
           KGGCNGIGAW FNSVLNGAILLLFLNFYLKIH+GKT+  VKI+K QQPCSGNLE      
Sbjct: 241 KGGCNGIGAWGFNSVLNGAILLLFLNFYLKIHVGKTKSCVKIMK-QQPCSGNLE------ 300

Query: 301 LSKAENFKEK 311
              AEN KEK
Sbjct: 301 ---AENLKEK 300

[Close]

BLAST of Lsi01G010520 vs. TAIR 10
Match: AT4G36830.1 (GNS1/SUR4 membrane protein family )

HSP 1 Score: 383.3 bits (983), Expect = 1.9e-106
Identity = 189/268 (70.52%), Postives = 222/268 (82.84%), Query Frame = 0


Query: 8   INDFTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFSTTVHLFLSLLLRPGRPV 67
           IN  TY+LSEHP IVGFRWS++ SWGSTWSFLF+SI+ Y+A S+++H+ LS + R  R V
Sbjct: 6   INSITYFLSEHPYIVGFRWSNSQSWGSTWSFLFTSISLYIAVSSSLHILLSAVRRSNRSV 65

Query: 68  PLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSK--TPFQWLLCFPLGTRP 127
           PLG IP IH L M+++S  I AGILLS+AAEIRDTRW WRRSK  TP QWLLCFPLGTRP
Sbjct: 66  PLGHIPEIHSLLMSILSATIFAGILLSAAAEIRDTRWLWRRSKTATPLQWLLCFPLGTRP 125

Query: 128 SGRVFFWSYIYYLSRFFHMFRTIFTILRSRRLSFFQLFNHSISTFMSFLWLEFSQSFQVL 187
           SGRVFFWSY++YL+RF HMFRTIF +LRSRRL+  QLF +S+  F SFLWLEFSQS+Q+L
Sbjct: 126 SGRVFFWSYVFYLTRFLHMFRTIFAVLRSRRLAVSQLFCNSVMAFTSFLWLEFSQSYQIL 185

Query: 188 AILSTSVVYAVVYGYRFWTAIGLRRACFP-FVVNCQFVLLGCNLACHVGVLMLHFMKGGC 247
           AILST++VY+VVYGYRFWT  GL  + FP FVVNCQ VL+GCNL  H GVL +H  KGGC
Sbjct: 186 AILSTTLVYSVVYGYRFWTGFGLPGSAFPSFVVNCQLVLVGCNLVSHAGVLTMHLFKGGC 245

Query: 248 NGIGAWSFNSVLNGAILLLFLNFYLKIH 273
           NGIGAW  NSVLNGAILLLFLNFY+++H
Sbjct: 246 NGIGAWGLNSVLNGAILLLFLNFYVRMH 273

[Close]

BLAST of Lsi01G010520 vs. TAIR 10
Match: AT1G75000.1 (GNS1/SUR4 membrane protein family )

HSP 1 Score: 337.4 bits (864), Expect = 1.2e-92
Identity = 170/265 (64.15%), Postives = 206/265 (77.74%), Query Frame = 0


Query: 11  FTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFSTTVHLFLSLLL---RPGRPV 70
           F Y+L+EHP+IV FRWS T S+ STWSFLF++++ Y+  + T+HL L + L      R  
Sbjct: 4   FNYYLAEHPTIVNFRWSPTQSYASTWSFLFTAVSSYIIAAVTLHLLLLITLSLSNRRRGF 63

Query: 71  PLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSK-TPFQWLLCFPLGTRPS 130
            LGPIPA+H L++++IS +I  GILLS+AAEIRDTRW WRR++ T  QW LCFP+GTR S
Sbjct: 64  SLGPIPALHSLTISIISAVIFVGILLSAAAEIRDTRWLWRRTRTTALQWFLCFPVGTRAS 123

Query: 131 GRVFFWSYIYYLSRFFHMFRTIFTILRSRRLSFFQLFNHSISTFMSFLWLEFSQSFQVLA 190
           GRVFFWSY +YLSRF H+FRT F+++R R+LSFFQL N S    +SFLWLE+SQSFQV+A
Sbjct: 124 GRVFFWSYAFYLSRFLHLFRTFFSVIRRRKLSFFQLINQSSLLCISFLWLEYSQSFQVVA 183

Query: 191 ILSTSVVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHFMK-GGCN 250
           IL T+V YAVVYGYRFWT IGLR ACFPFV NCQ +LLGC   CHVGVL +H +K GGCN
Sbjct: 184 ILLTTVSYAVVYGYRFWTEIGLRGACFPFVGNCQAILLGCMTVCHVGVLCIHLVKRGGCN 243

Query: 251 GIGAWSFNSVLNGAILLLFLNFYLK 271
           GIGAW FNSVLN  I LL+L FY K
Sbjct: 244 GIGAWLFNSVLNAVITLLYLKFYCK 268

[Close]

BLAST of Lsi01G010520 vs. TAIR 10
Match: AT3G06470.1 (GNS1/SUR4 membrane protein family )

HSP 1 Score: 134.4 bits (337), Expect = 1.6e-31
Identity = 89/276 (32.25%), Postives = 137/276 (49.64%), Query Frame = 0


Query: 9   NDFTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFSTTVHLFLSLLLRPG---- 68
           +  TYWL  HP I  F W    + GST         F+++   +V+L  + LLR      
Sbjct: 6   SSLTYWLVNHPYISNFTWIEGETLGST--------VFFVSVVVSVYLSATFLLRSAIDSL 65

Query: 69  ---RPVPLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKTPFQWLLCFPL 128
               P  L PI A+H L + L+S +++ G  LS  +    +    R     F   +CFP+
Sbjct: 66  PSLSPRILKPITAVHSLILCLLSLVMAVGCTLSITSSHASSDPMAR-----FLHAICFPV 125

Query: 129 GTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRS--RRLSFFQLFNHSISTFMSFLWLEFS 188
             +P+G +FFW+ ++YLS+      TI  IL    +RLSF  +++H+    M +LWL   
Sbjct: 126 DVKPNGPLFFWAQVFYLSKILEFGDTILIILGKSIQRLSFLHVYHHATVVVMCYLWLRTR 185

Query: 189 QSFQVLAILSTSVVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLMLHF 248
           QS   +A+++ S V+ ++YGY F  A+G R      V +CQ V    +      +L  H 
Sbjct: 186 QSMFPIALVTNSTVHVIMYGYYFLCAVGSRPKWKRLVTDCQIVQFVFSFGLSGWMLREHL 245

Query: 249 MKGGCNGIGAWSFNSVLNGAILLLFLNFYLKIHLGK 276
              GC GI  W FN+  N ++L LF NF+ K ++ K
Sbjct: 246 FGSGCTGIWGWCFNAAFNASLLALFSNFHSKNYVKK 268

[Close]

BLAST of Lsi01G010520 vs. TAIR 10
Match: AT3G06460.1 (GNS1/SUR4 membrane protein family )

HSP 1 Score: 121.7 bits (304), Expect = 1.0e-27
Identity = 85/262 (32.44%), Postives = 127/262 (48.47%), Query Frame = 0


Query: 12  TYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFSTTVHLFLSLLLRPGRPVPLGP 71
           TYWL  HP I  F W+   + GST  F+F  ++ YL+ +  +   +  L   G P  L P
Sbjct: 9   TYWLVHHPYIANFTWTEGETLGSTVFFVFVVVSLYLSATFLLRYTVDSLPTLG-PRILKP 68

Query: 72  IPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKTPFQWLLCFPLGTRPSGRVFF 131
           I A+H L + L+S  ++ G  LS  +            K      +CFPL  +P G +FF
Sbjct: 69  ITAVHSLILFLLSLTMAVGCTLSLISS--------SDPKARLFDAVCFPLDVKPKGPLFF 128

Query: 132 WSYIYYLSRFFHMFRTIFTILRS--RRLSFFQLFNHSISTFMSFLWLEFSQSFQVLAILS 191
           W+ ++YLS+      T+  IL    +RLSF  +++H+    + +LWL   QS   + ++ 
Sbjct: 129 WAQVFYLSKILEFVDTLLIILNKSIQRLSFLHVYHHATVVILCYLWLRTRQSMFPVGLVL 188

Query: 192 TSVVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVG-VLMLHFMKGGCNGIG 251
            S V+ ++YGY F  AIG R      V N Q V     +      +L  H+   GC GI 
Sbjct: 189 NSTVHVIMYGYYFLCAIGSRPKWKKLVTNFQMVQFAFGMGLGAAWMLPEHYFGSGCAGIW 248

Query: 252 AWSFNSVLNGAILLLFLNFYLK 271
              FN V   ++L LF NF+ K
Sbjct: 249 TVYFNGVFTASLLALFYNFHSK 261

The following BLAST results are available for this feature:

BLAST of Lsi01G010520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SYY4	2.7e-105	70.52	Elongation of fatty acids protein 3-like OS=Arabidopsis thaliana OX=3702 GN=HOS3...	[more]
Q86JM5	4.4e-07	22.18	Putative elongation of fatty acids protein DDB_G0272012 OS=Dictyostelium discoid...	[more]
Q54CJ4	9.2e-05	25.19	Elongation of fatty acids protein A OS=Dictyostelium discoideum OX=44689 GN=eloA...	[more]

BLAST of Lsi01G010520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B0F3	1.1e-162	92.41	elongation of fatty acids protein 3-like OS=Cucumis melo OX=3656 GN=LOC103484706...	[more]
A0A0A0KL12	3.6e-161	91.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G487670 PE=4 SV=1	[more]
A0A6J1HG46	3.6e-153	88.71	elongation of fatty acids protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1KPE4	3.1e-152	90.60	elongation of fatty acids protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1IMF1	2.4e-149	92.39	elongation of fatty acids protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]

BLAST of Lsi01G010520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880984.1	4.1e-167	94.59	elongation of fatty acids protein 3-like [Benincasa hispida]	[more]
XP_008440157.1	2.3e-162	92.41	PREDICTED: elongation of fatty acids protein 3-like [Cucumis melo]	[more]
XP_031744113.1	7.4e-161	91.46	elongation of fatty acids protein 3-like [Cucumis sativus] >XP_031744114.1 elong...	[more]
XP_023518252.1	2.6e-153	90.94	elongation of fatty acids protein 3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022962893.1	7.4e-153	88.71	elongation of fatty acids protein 3-like [Cucurbita moschata]	[more]

BLAST of Lsi01G010520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36830.1	1.9e-106	70.52	GNS1/SUR4 membrane protein family	[more]
AT1G75000.1	1.2e-92	64.15	GNS1/SUR4 membrane protein family	[more]
AT3G06470.1	1.6e-31	32.25	GNS1/SUR4 membrane protein family	[more]
AT3G06460.1	1.0e-27	32.44	GNS1/SUR4 membrane protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002076	ELO family	PFAM	PF01151	ELO	coord: 34..277 e-value: 3.9E-32 score: 111.8
IPR002076	ELO family	PANTHER	PTHR11157	FATTY ACID ACYL TRANSFERASE-RELATED	coord: 10..282
None	No IPR available	PANTHER	PTHR11157:SF11	ELONGATION OF FATTY ACIDS PROTEIN 3-LIKE	coord: 10..282

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G010520.1	Lsi01G010520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009922	fatty acid elongase activity