Lsi01G010380 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G010380
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	CASP-like protein
Location	chr01: 8564844 .. 8566738 (+)
RNA-Seq Expression	Lsi01G010380
Synteny	Lsi01G010380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAGCTGCCGGGGGCATTGGGCACAAGCGCAAGCTTGGCCCTCCGTCTTGGTCAGGCGATCTTTGCCTCGGCTTCCCTCTTCTTCATGTGTCTCGAAATTGAATTCTATAGCTACACGGCTTTCTGGTAATCTGAATTTCTTTTTGGCCCTGTTCCTTCAGTTCCTAATTTCTCTTATTGGGTTGTTTTTGTTTTGGTTTTCTGATCATGATTGGACTAAGACAATCCTTAAATCGGCTTAATCTTGCTGTAATTAGCAAATTGTGTTGTATGCATTTCGTAAATTAGTGTGTCAAATGTTTGTTACTGCCTATTAGGAATTCTATGTCATGGGGATTGATTAATGGATTGTAGACAACCATGTGTTTTCCCATCAAGTTGTGAATTTAGATACTTCTGAAGTCATAGTACAATAACCTAGGAGCTTCTTCATATCTGATGTTATCTGAGGTAAGATAGTTATCATGTGAAATTAGTCGAAGAGAGTTTAAATATTAGTTTGTTTGGAGCATTTCTTTTCTATTTCTATCTTTAACAGGGTAAAAAGTATATAAACAAAGATTAGCCGATTCAAGGTGTGTTATTATACTACTGGAATCATTTCAAACTCAGTTACAATTTGCAGAATGGAAGTCCAACAACAAGTATGTTTCTTAGGAAGTGAGATTTGGTAATGAACTTTGTATTTGAAACGATAGCTCTAAATGTATGTCTAGTTGCAAAAGTGTTAACATGATGAACTTTCCTTTTGTTAAAATGAGTGTGATTTCCCCTCAATAATCCATGGACTGCAATGGGGCACATTCCTCTGATCAAACAAAGTTTTCTGATATAGATAGATTAGCATTGTCTAGTATTCTAGTTTTTAAGTAATTAAGTGACTGTTTGGAGCACTAAGTTGGTTTCTATAGTCAGTGACTATGTTAGTCTGTGAGTTATTAGTCTGTGTTTGGAGTGCATGCTATTTTAGTTTGAGTTACAAATGAAGAGAGATAATAGTTACAAAATAGTAAACTTCGTAGACAATGAGAGTTTTCAAATAGTTTTGCTGTAGCTAAATGTGGATTATAATAGTTGAAGTTTATAATTCAAAACTTCAACTATTATAATAGATGGTCCAAACATTGAGAGCCCACTCTATCTAAGGCAAGTTGGGGGCCCAATCGCCCCCTAAGAGGTTACATTTTCTAATTGTAAGGAGCAAATTTCCTGTTTCCATCCAACATCAAGCTTAATATGTTTGGGGTTAGAATGGTGTGTTAATGGTGACAATATCTGTTATTTGGATAAATTTGCATCTTAGGAGGACTTCTGAAAGATGTTCATCCAGGAGAGCATAATATATGATGAAAACTTGAGCTAATTTTCTGTTGTTTTCCCTGATCATACATACACCTGCAAAAATATATGAAGATCCAAAATCTCAAGAAAACTTTGTCATTGCTCATGTTGATTCCCTCAGCTATCTGGTGACAGTCATGGGTTTGATGGTTCCATGGAGTCTGACATTGGCAGTAGTAGATGGATATTCTGTTTTTGTTAGGCATTTACCTCCTCAAACAAGAGTAACATCGATCATCGTCACCGGAGATTGGGTACGGGAAATCTCGTCCACGAAACAAAATATAACATCTTTGTTCTTTCTCCTTCTGGTAGAAAATGAAAGAAAAACATTTAACATTTGCTCTGTCATAGGTTCTATCATTTCTCTCCTTGGGTGCTGCTTGCTCGACAGCCAGTGTCGCTGATATCTTGCTCGAAGCCGGGATTTCGTATTGTTCTGCAAAGCTTTGCAGTAGATATCGGCTTTCTGCAGCAATGGCATTCTTGTCATGGTTTCTTTCTTTGATTTCTTCCCTCTTCAATCTCTGGCTTCTTCCTTCTTTGTAG

mRNA sequence

ATGGAAGAGCTGCCGGGGGCATTGGGCACAAGCGCAAGCTTGGCCCTCCGTCTTGGTCAGGCGATCTTTGCCTCGGCTTCCCTCTTCTTCATGTGTCTCGAAATTGAATTCTATAGCTACACGGCTTTCTGCTATCTGGTGACAGTCATGGGTTTGATGGTTCCATGGAGTCTGACATTGGCAGTAGTAGATGGATATTCTGTTTTTGTTAGGCATTTACCTCCTCAAACAAGAGTAACATCGATCATCGTCACCGGAGATTGGGTTCTATCATTTCTCTCCTTGGGTGCTGCTTGCTCGACAGCCAGTGTCGCTGATATCTTGCTCGAAGCCGGGATTTCGTATTGTTCTGCAAAGCTTTGCAGTAGATATCGGCTTTCTGCAGCAATGGCATTCTTGTCATGGTTTCTTTCTTTGATTTCTTCCCTCTTCAATCTCTGGCTTCTTCCTTCTTTGTAG

Coding sequence (CDS)

ATGGAAGAGCTGCCGGGGGCATTGGGCACAAGCGCAAGCTTGGCCCTCCGTCTTGGTCAGGCGATCTTTGCCTCGGCTTCCCTCTTCTTCATGTGTCTCGAAATTGAATTCTATAGCTACACGGCTTTCTGCTATCTGGTGACAGTCATGGGTTTGATGGTTCCATGGAGTCTGACATTGGCAGTAGTAGATGGATATTCTGTTTTTGTTAGGCATTTACCTCCTCAAACAAGAGTAACATCGATCATCGTCACCGGAGATTGGGTTCTATCATTTCTCTCCTTGGGTGCTGCTTGCTCGACAGCCAGTGTCGCTGATATCTTGCTCGAAGCCGGGATTTCGTATTGTTCTGCAAAGCTTTGCAGTAGATATCGGCTTTCTGCAGCAATGGCATTCTTGTCATGGTTTCTTTCTTTGATTTCTTCCCTCTTCAATCTCTGGCTTCTTCCTTCTTTGTAG

Protein sequence

MEELPGALGTSASLALRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTLAVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKLCSRYRLSAAMAFLSWFLSLISSLFNLWLLPSL

Homology

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BLAST of Lsi01G010380 vs. ExPASy Swiss-Prot
Match: D7LTJ4 (CASP-like protein ARALYDRAFT_485429 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_485429 PE=3 SV=2)

HSP 1 Score: 170.2 bits (430), Expect = 1.7e-41
Identity = 87/152 (57.24%), Postives = 110/152 (72.37%), Query Frame = 0


Query: 1   MEELPGALGTSASLALRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL 60
           ME +PG+ GTSAS ALR GQ IF++ASL FMC + +FY +T FCYL TVM ++ PWS+ L
Sbjct: 1   MENVPGSFGTSASFALRFGQTIFSAASLIFMCFDYDFYDFTTFCYLATVMAIVTPWSILL 60

Query: 61  AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL 120
           A+ D YSV V+ LP + RV SI+  GD+VLSFLSLG AC+ AS  ++L  A    C   L
Sbjct: 61  ALTDTYSVLVKLLPQELRVLSIVFAGDFVLSFLSLGGACAVASATELLASADGKICDGNL 120

Query: 121 CSRYRLSAAMAFLSWFLSLISSLFNLWLLPSL 153
           C +Y++SAA+AFL WFL L S+LFN W LPSL
Sbjct: 121 CIQYQVSAALAFLCWFLLLASALFNFWSLPSL 152

[Close]

BLAST of Lsi01G010380 vs. ExPASy Swiss-Prot
Match: P0CB17 (CASP-like protein 5C2 OS=Arabidopsis thaliana OX=3702 GN=At3g50810 PE=2 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 6.6e-41
Identity = 86/152 (56.58%), Postives = 109/152 (71.71%), Query Frame = 0


Query: 1   MEELPGALGTSASLALRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL 60
           ME +PG+ GTSAS ALR GQ IF++ASL FMC + +FY +T FCYL  VM ++ PWS+ L
Sbjct: 1   MEHVPGSFGTSASFALRFGQTIFSAASLIFMCFDFDFYDFTTFCYLAMVMAIVTPWSILL 60

Query: 61  AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL 120
           A+ D YSV V+ LP + RV SI+  GD+VLSFLSLG AC+ AS  ++L  A    C   L
Sbjct: 61  ALTDTYSVLVKLLPQELRVLSIVFAGDFVLSFLSLGGACAVASATELLASADGKICDGSL 120

Query: 121 CSRYRLSAAMAFLSWFLSLISSLFNLWLLPSL 153
           C +Y++SAA+AFL WFL L S+LFN W LPSL
Sbjct: 121 CIQYQVSAALAFLCWFLLLASALFNFWSLPSL 152

[Close]

BLAST of Lsi01G010380 vs. ExPASy Swiss-Prot
Match: Q66GI1 (CASP-like protein 5C1 OS=Arabidopsis thaliana OX=3702 GN=At4g37235 PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 6.2e-39
Identity = 92/154 (59.74%), Postives = 113/154 (73.38%), Query Frame = 0


Query: 1   MEELPGALGTSASLALRLGQAIFASASLFFMCL--EIEFYSYTAFCYLVTVMGLMVPWSL 60
           M     + GTS+S  LRLGQ +F+SASL FMC   + +FY+YT FCYLVTVMGL+ PWS+
Sbjct: 1   MVRTTASFGTSSSFVLRLGQTLFSSASLLFMCFNDDEDFYAYTTFCYLVTVMGLVTPWSV 60

Query: 61  TLAVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSA 120
           TLA+++ YS+ V+ LP Q  V S+IV GD+VLSFLSLG ACSTASVA +L++AG      
Sbjct: 61  TLALMEAYSILVKKLPMQATVISVIVAGDFVLSFLSLGGACSTASVAVLLMDAG-----E 120

Query: 121 KLCSRYRLSAAMAFLSWFLSLISSLFNLWLLPSL 153
           K C RY+LSA MAFLS FLS  S+ FN  LLPSL
Sbjct: 121 KQCDRYKLSATMAFLSSFLSFASTFFNFCLLPSL 149

[Close]

BLAST of Lsi01G010380 vs. ExPASy Swiss-Prot
Match: Q10EJ2 (CASP-like protein 5C1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0767900 PE=2 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.4e-38
Identity = 85/146 (58.22%), Postives = 112/146 (76.71%), Query Frame = 0


Query: 6   GALGTSASLALRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTLAVVDG 65
           GA+G++ SL LR+GQA+F+SASL FM + +EF+SYTAFC+LVT+MGL++PWS TLA++D 
Sbjct: 10  GAVGSAGSLGLRVGQAVFSSASLLFMSVGVEFFSYTAFCFLVTIMGLVIPWSCTLAMIDV 69

Query: 66  YSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKLCSRYR 125
           YS+ V        V  I+V GDWVL+ LSL AA S+A+V D+LL+   S+CS + C RY+
Sbjct: 70  YSILVGCPLRVPGVMVIVVIGDWVLAILSLAAASSSAAVIDLLLQFHGSHCSPRFCGRYQ 129

Query: 126 LSAAMAFLSWFLSLISSLFNLWLLPS 152
           LSA MAFLSWFL+  SSLFNLW + S
Sbjct: 130 LSAMMAFLSWFLTAASSLFNLWFIAS 155

[Close]

BLAST of Lsi01G010380 vs. ExPASy Swiss-Prot
Match: B8BPI2 (CASP-like protein 5C1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_38237 PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.0e-37
Identity = 84/146 (57.53%), Postives = 111/146 (76.03%), Query Frame = 0


Query: 6   GALGTSASLALRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTLAVVDG 65
           GA+G++ SL LR+ QA+F+SASL FM + +EF+SYTAFC+LVT+MGL++PWS TLA++D 
Sbjct: 10  GAVGSAGSLGLRVEQAVFSSASLLFMSVGVEFFSYTAFCFLVTIMGLVIPWSCTLAMIDV 69

Query: 66  YSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKLCSRYR 125
           YS+ V        V  I+V GDWVL+ LSL AA S+A+V D+LL+   S+CS + C RY+
Sbjct: 70  YSILVGCPLRVPGVMVIVVIGDWVLAILSLAAASSSAAVIDLLLQFHGSHCSPRFCGRYQ 129

Query: 126 LSAAMAFLSWFLSLISSLFNLWLLPS 152
           LSA MAFLSWFL+  SSLFNLW + S
Sbjct: 130 LSAMMAFLSWFLTAASSLFNLWFIAS 155

[Close]

BLAST of Lsi01G010380 vs. ExPASy TrEMBL
Match: A0A5D3CP47 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005330 PE=3 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 6.8e-73
Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MEELPGALGTSASLALRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL 60
           MEELPGALGTSASLALRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL
Sbjct: 1   MEELPGALGTSASLALRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL 60

Query: 61  AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL 120
           AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL
Sbjct: 61  AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL 120

Query: 121 CSRYRLSAAMAFLSWFLSLISSLFNLWLLPSL 153
           CSRYRLSA MAFLSWFLSL+SSLFNLWLLPSL
Sbjct: 121 CSRYRLSAGMAFLSWFLSLVSSLFNLWLLPSL 152

[Close]

BLAST of Lsi01G010380 vs. ExPASy TrEMBL
Match: A0A0A0KG19 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G488330 PE=3 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 6.8e-73
Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MEELPGALGTSASLALRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL 60
           MEELPGALGTSASLALRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL
Sbjct: 1   MEELPGALGTSASLALRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL 60

Query: 61  AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL 120
           AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL
Sbjct: 61  AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL 120

Query: 121 CSRYRLSAAMAFLSWFLSLISSLFNLWLLPSL 153
           CSRYRLSA MAFLSWFLSL+SSLFNLWLLPSL
Sbjct: 121 CSRYRLSAGMAFLSWFLSLVSSLFNLWLLPSL 152

[Close]

BLAST of Lsi01G010380 vs. ExPASy TrEMBL
Match: A0A1S3B191 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103484722 PE=3 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 6.8e-73
Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MEELPGALGTSASLALRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL 60
           MEELPGALGTSASLALRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL
Sbjct: 1   MEELPGALGTSASLALRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL 60

Query: 61  AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL 120
           AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL
Sbjct: 61  AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL 120

Query: 121 CSRYRLSAAMAFLSWFLSLISSLFNLWLLPSL 153
           CSRYRLSA MAFLSWFLSL+SSLFNLWLLPSL
Sbjct: 121 CSRYRLSAGMAFLSWFLSLVSSLFNLWLLPSL 152

[Close]

BLAST of Lsi01G010380 vs. ExPASy TrEMBL
Match: A0A6J1BSG8 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111005297 PE=3 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 7.6e-72
Identity = 147/152 (96.71%), Postives = 150/152 (98.68%), Query Frame = 0


Query: 1   MEELPGALGTSASLALRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL 60
           MEELPGALGTSASLALRLGQ +FA+ASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL
Sbjct: 1   MEELPGALGTSASLALRLGQTVFATASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL 60

Query: 61  AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL 120
           AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILL AGISYCSAKL
Sbjct: 61  AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLRAGISYCSAKL 120

Query: 121 CSRYRLSAAMAFLSWFLSLISSLFNLWLLPSL 153
           CSRYRLSAAMAFLSWFLSL+SSLFNLWLLPSL
Sbjct: 121 CSRYRLSAAMAFLSWFLSLVSSLFNLWLLPSL 152

[Close]

BLAST of Lsi01G010380 vs. ExPASy TrEMBL
Match: A0A6J1GCS9 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111453015 PE=3 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 9.9e-72
Identity = 148/152 (97.37%), Postives = 150/152 (98.68%), Query Frame = 0


Query: 1   MEELPGALGTSASLALRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL 60
           MEELPGALGTSASLALRLGQAIFASASL FMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL
Sbjct: 1   MEELPGALGTSASLALRLGQAIFASASLVFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL 60

Query: 61  AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL 120
           AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL
Sbjct: 61  AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL 120

Query: 121 CSRYRLSAAMAFLSWFLSLISSLFNLWLLPSL 153
           C+RYRLSA MAFLSWFLSL+SSLFNLWLLPSL
Sbjct: 121 CNRYRLSAVMAFLSWFLSLVSSLFNLWLLPSL 152

[Close]

BLAST of Lsi01G010380 vs. NCBI nr
Match: XP_038883818.1 (CASP-like protein ARALYDRAFT_485429 [Benincasa hispida])

HSP 1 Score: 283.9 bits (725), Expect = 8.3e-73
Identity = 151/152 (99.34%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MEELPGALGTSASLALRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL 60
           MEELPGALGTSASLALRLGQ+IFASASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL
Sbjct: 1   MEELPGALGTSASLALRLGQSIFASASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL 60

Query: 61  AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL 120
           AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL
Sbjct: 61  AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL 120

Query: 121 CSRYRLSAAMAFLSWFLSLISSLFNLWLLPSL 153
           CSRYRLSAAMAFLSWFLSLISSLFNLWLLPSL
Sbjct: 121 CSRYRLSAAMAFLSWFLSLISSLFNLWLLPSL 152

[Close]

BLAST of Lsi01G010380 vs. NCBI nr
Match: XP_004141947.1 (CASP-like protein ARALYDRAFT_485429 [Cucumis sativus] >XP_008440180.1 PREDICTED: CASP-like protein ARALYDRAFT_485429 [Cucumis melo] >KGN48463.1 hypothetical protein Csa_003565 [Cucumis sativus] >TYK12938.1 CASP-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 283.1 bits (723), Expect = 1.4e-72
Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MEELPGALGTSASLALRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL 60
           MEELPGALGTSASLALRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL
Sbjct: 1   MEELPGALGTSASLALRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL 60

Query: 61  AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL 120
           AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL
Sbjct: 61  AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL 120

Query: 121 CSRYRLSAAMAFLSWFLSLISSLFNLWLLPSL 153
           CSRYRLSA MAFLSWFLSL+SSLFNLWLLPSL
Sbjct: 121 CSRYRLSAGMAFLSWFLSLVSSLFNLWLLPSL 152

[Close]

BLAST of Lsi01G010380 vs. NCBI nr
Match: XP_022132440.1 (CASP-like protein ARALYDRAFT_485429 [Momordica charantia])

HSP 1 Score: 279.6 bits (714), Expect = 1.6e-71
Identity = 147/152 (96.71%), Postives = 150/152 (98.68%), Query Frame = 0


Query: 1   MEELPGALGTSASLALRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL 60
           MEELPGALGTSASLALRLGQ +FA+ASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL
Sbjct: 1   MEELPGALGTSASLALRLGQTVFATASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL 60

Query: 61  AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL 120
           AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILL AGISYCSAKL
Sbjct: 61  AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLRAGISYCSAKL 120

Query: 121 CSRYRLSAAMAFLSWFLSLISSLFNLWLLPSL 153
           CSRYRLSAAMAFLSWFLSL+SSLFNLWLLPSL
Sbjct: 121 CSRYRLSAAMAFLSWFLSLVSSLFNLWLLPSL 152

[Close]

BLAST of Lsi01G010380 vs. NCBI nr
Match: XP_022949698.1 (CASP-like protein ARALYDRAFT_485429 [Cucurbita moschata] >XP_023544965.1 CASP-like protein ARALYDRAFT_485429 [Cucurbita pepo subsp. pepo] >KAG7034379.1 CASP-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 279.3 bits (713), Expect = 2.0e-71
Identity = 148/152 (97.37%), Postives = 150/152 (98.68%), Query Frame = 0


Query: 1   MEELPGALGTSASLALRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL 60
           MEELPGALGTSASLALRLGQAIFASASL FMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL
Sbjct: 1   MEELPGALGTSASLALRLGQAIFASASLVFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL 60

Query: 61  AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL 120
           AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL
Sbjct: 61  AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL 120

Query: 121 CSRYRLSAAMAFLSWFLSLISSLFNLWLLPSL 153
           C+RYRLSA MAFLSWFLSL+SSLFNLWLLPSL
Sbjct: 121 CNRYRLSAVMAFLSWFLSLVSSLFNLWLLPSL 152

[Close]

BLAST of Lsi01G010380 vs. NCBI nr
Match: XP_022978850.1 (CASP-like protein ARALYDRAFT_485429 [Cucurbita maxima])

HSP 1 Score: 278.5 bits (711), Expect = 3.5e-71
Identity = 147/152 (96.71%), Postives = 150/152 (98.68%), Query Frame = 0


Query: 1   MEELPGALGTSASLALRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL 60
           MEE+PGALGTSASLALRLGQAIFASASL FMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL
Sbjct: 1   MEEMPGALGTSASLALRLGQAIFASASLVFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL 60

Query: 61  AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL 120
           AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL
Sbjct: 61  AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL 120

Query: 121 CSRYRLSAAMAFLSWFLSLISSLFNLWLLPSL 153
           C+RYRLSA MAFLSWFLSL+SSLFNLWLLPSL
Sbjct: 121 CNRYRLSAVMAFLSWFLSLVSSLFNLWLLPSL 152

[Close]

BLAST of Lsi01G010380 vs. TAIR 10
Match: AT3G50810.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 168.3 bits (425), Expect = 4.7e-42
Identity = 86/152 (56.58%), Postives = 109/152 (71.71%), Query Frame = 0


Query: 1   MEELPGALGTSASLALRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL 60
           ME +PG+ GTSAS ALR GQ IF++ASL FMC + +FY +T FCYL  VM ++ PWS+ L
Sbjct: 1   MEHVPGSFGTSASFALRFGQTIFSAASLIFMCFDFDFYDFTTFCYLAMVMAIVTPWSILL 60

Query: 61  AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL 120
           A+ D YSV V+ LP + RV SI+  GD+VLSFLSLG AC+ AS  ++L  A    C   L
Sbjct: 61  ALTDTYSVLVKLLPQELRVLSIVFAGDFVLSFLSLGGACAVASATELLASADGKICDGSL 120

Query: 121 CSRYRLSAAMAFLSWFLSLISSLFNLWLLPSL 153
           C +Y++SAA+AFL WFL L S+LFN W LPSL
Sbjct: 121 CIQYQVSAALAFLCWFLLLASALFNFWSLPSL 152

[Close]

BLAST of Lsi01G010380 vs. TAIR 10
Match: AT4G37235.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 161.8 bits (408), Expect = 4.4e-40
Identity = 92/154 (59.74%), Postives = 113/154 (73.38%), Query Frame = 0


Query: 1   MEELPGALGTSASLALRLGQAIFASASLFFMCL--EIEFYSYTAFCYLVTVMGLMVPWSL 60
           M     + GTS+S  LRLGQ +F+SASL FMC   + +FY+YT FCYLVTVMGL+ PWS+
Sbjct: 1   MVRTTASFGTSSSFVLRLGQTLFSSASLLFMCFNDDEDFYAYTTFCYLVTVMGLVTPWSV 60

Query: 61  TLAVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSA 120
           TLA+++ YS+ V+ LP Q  V S+IV GD+VLSFLSLG ACSTASVA +L++AG      
Sbjct: 61  TLALMEAYSILVKKLPMQATVISVIVAGDFVLSFLSLGGACSTASVAVLLMDAG-----E 120

Query: 121 KLCSRYRLSAAMAFLSWFLSLISSLFNLWLLPSL 153
           K C RY+LSA MAFLS FLS  S+ FN  LLPSL
Sbjct: 121 KQCDRYKLSATMAFLSSFLSFASTFFNFCLLPSL 149

[Close]

BLAST of Lsi01G010380 vs. TAIR 10
Match: AT1G49405.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 154.1 bits (388), Expect = 9.2e-38
Identity = 84/152 (55.26%), Postives = 111/152 (73.03%), Query Frame = 0


Query: 1   MEELPGALGTSASLALRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL 60
           M E+PG++GT+ASL+LRLGQ + A  SL FM + + FY +TAFCYLVT+M L +PW+LTL
Sbjct: 1   MVEVPGSVGTTASLSLRLGQMVLAFGSLLFMTIGVRFYQFTAFCYLVTIMSLAIPWNLTL 60

Query: 61  AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL 120
           A+VD Y V ++    + R+   I  GDWV+S L+L +A S ASV DI L +  S C   +
Sbjct: 61  AMVDIYCVILQQPFQKPRILLAISIGDWVVSVLALASASSAASVVDI-LRSNESSCPPTI 120

Query: 121 CSRYRLSAAMAFLSWFLSLISSLFNLWLLPSL 153
           C+RY+ +A +AFL+WFLSL SSLFNLWLLPSL
Sbjct: 121 CNRYQFAATLAFLTWFLSLSSSLFNLWLLPSL 151

[Close]

BLAST of Lsi01G010380 vs. TAIR 10
Match: AT2G28370.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 105.1 bits (261), Expect = 4.9e-23
Identity = 63/151 (41.72%), Postives = 91/151 (60.26%), Query Frame = 0


Query: 1   MEELPGALGTSASLALRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL 60
           M+++ G  GT   LALR  Q +FA+A+L  M    +F S TAFCYLV   GL   WSL L
Sbjct: 29  MDDMEGMPGTLLGLALRFFQFLFAAAALCVMASTSDFPSVTAFCYLVAATGLQSLWSLAL 88

Query: 61  AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL 120
           A+VD Y++ V+      R+ S+   GD V S L+  AAC++A +  +L++  ++ C+   
Sbjct: 89  AMVDVYAIMVKRSLQNRRLVSLFAIGDGVTSTLTFAAACASAGIT-VLIDNDLNSCAQNH 148

Query: 121 CSRYRLSAAMAFLSWFLSLISSLFNLWLLPS 152
           C ++  S A+AF+SWF +L S LFN W L S
Sbjct: 149 CVQFETSTALAFISWFAALPSFLFNFWSLAS 178

[Close]

BLAST of Lsi01G010380 vs. TAIR 10
Match: AT3G23200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 104.0 bits (258), Expect = 1.1e-22
Identity = 63/152 (41.45%), Postives = 90/152 (59.21%), Query Frame = 0


Query: 1   MEELPGALGTSASLALRLGQAIFASASLFFMCLEIEFYSYTAFCYLVTVMGLMVPWSLTL 60
           M ++PG  GT   L LR+ Q +FA+ S+ +M     F+S+TAFCYL+  MGL V WS  L
Sbjct: 1   MIDIPGTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFCYLIAAMGLQVIWSFGL 60

Query: 61  AVVDGYSVFVRHLPPQTRVTSIIVTGDWVLSFLSLGAACSTASVADILLEAGISYCSAKL 120
           A++D +++  +       + S+ V GDWV S LSL  A S+A +  +L    +  CS + 
Sbjct: 61  AILDTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGIT-VLYFGDLGSCSFEA 120

Query: 121 -CSRYRLSAAMAFLSWFLSLISSLFNLWLLPS 152
            C +Y+LS A+AFL W    +SSL  LWLL S
Sbjct: 121 ECWKYQLSVALAFLCWITIAVSSLTTLWLLAS 151

The following BLAST results are available for this feature:

BLAST of Lsi01G010380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
D7LTJ4	1.7e-41	57.24	CASP-like protein ARALYDRAFT_485429 OS=Arabidopsis lyrata subsp. lyrata OX=81972...	[more]
P0CB17	6.6e-41	56.58	CASP-like protein 5C2 OS=Arabidopsis thaliana OX=3702 GN=At3g50810 PE=2 SV=1	[more]
Q66GI1	6.2e-39	59.74	CASP-like protein 5C1 OS=Arabidopsis thaliana OX=3702 GN=At4g37235 PE=2 SV=1	[more]
Q10EJ2	2.4e-38	58.22	CASP-like protein 5C1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0767900 P...	[more]
B8BPI2	2.0e-37	57.53	CASP-like protein 5C1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_38237 PE=2 S...	[more]

BLAST of Lsi01G010380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CP47	6.8e-73	98.68	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00...	[more]
A0A0A0KG19	6.8e-73	98.68	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G488330 PE=3 SV=1	[more]
A0A1S3B191	6.8e-73	98.68	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103484722 PE=3 SV=1	[more]
A0A6J1BSG8	7.6e-72	96.71	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111005297 PE=3 SV=1	[more]
A0A6J1GCS9	9.9e-72	97.37	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111453015 PE=3 SV=1	[more]

BLAST of Lsi01G010380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883818.1	8.3e-73	99.34	CASP-like protein ARALYDRAFT_485429 [Benincasa hispida]	[more]
XP_004141947.1	1.4e-72	98.68	CASP-like protein ARALYDRAFT_485429 [Cucumis sativus] >XP_008440180.1 PREDICTED:...	[more]
XP_022132440.1	1.6e-71	96.71	CASP-like protein ARALYDRAFT_485429 [Momordica charantia]	[more]
XP_022949698.1	2.0e-71	97.37	CASP-like protein ARALYDRAFT_485429 [Cucurbita moschata] >XP_023544965.1 CASP-li...	[more]
XP_022978850.1	3.5e-71	96.71	CASP-like protein ARALYDRAFT_485429 [Cucurbita maxima]	[more]

BLAST of Lsi01G010380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50810.1	4.7e-42	56.58	Uncharacterised protein family (UPF0497)	[more]
AT4G37235.1	4.4e-40	59.74	Uncharacterised protein family (UPF0497)	[more]
AT1G49405.1	9.2e-38	55.26	Uncharacterised protein family (UPF0497)	[more]
AT2G28370.1	4.9e-23	41.72	Uncharacterised protein family (UPF0497)	[more]
AT3G23200.1	1.1e-22	41.45	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 9..137 e-value: 4.0E-21 score: 75.4
IPR045009	CASP-like protein 5	PANTHER	PTHR32021	CASP-LIKE PROTEIN 5B3	coord: 1..151
None	No IPR available	PANTHER	PTHR32021:SF30	CASP-LIKE PROTEIN 5C1	coord: 1..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G010380.1	Lsi01G010380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane