Lsi01G010220 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G010220
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Mitochodrial transcription termination factor
Location	chr01: 8459610 .. 8460758 (+)
RNA-Seq Expression	Lsi01G010220
Synteny	Lsi01G010220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATCCAGAGTTGTGGATTATTTCAAGCTCTGCTATTTACTATCTTCCAGGCAAGCATTTGTTTCCATTTTAGTGAACCAACCTTTAGAAGCTTGGCAAAAATTAAAGGTTGCCACTTGTTCAACAGTAAGTGTCAAACAAGTTGAAGAGGAGGTGGGAGAAGGGGCGGTGGCACATGCCAATGACCCTACTGAAGTTTTCCAGAGATGGGGTTGTACTGACAATGATATTGCACAAATCTTTGCACGTGGGCCTTCTCTGCGCAGGAGTGACTTAAACCAACTACAAAAAAAACTCCACCTGCTACAAGGCCTAGGGATCACATCTCCCGACCTTGTGAAGATCGTTAATTGTCGTCCCCGGTTTCTCAAATGTCGGATCAACAACAACTTCGATGAGCGGATTGAGTTTTTCTTGAAAATGTTTGAATCTAAAGAAGTTCTTGTCAAAGCCATTGTAAGAAACCCCTCACTTTTGACTTATGATTTCCATAATAGTGTCAAACCTGTAATTTCCCAGTATGAAGAAATTGGTCTTAGTAAAAAGGATTTGATTCCCATGCTTATATCTCGCCCCACATTGATTCCAAGATCTTCATTTAATGATGAGAAGATGGAATACATACAAAAAACAGGGCTTTCAAAGGGTGACAAGATGTTCAAATACGTCGTTACAATCATTGGTATCTCACGACTTGAAACGATCCGTCAAAAAGTAGCCAATTTGGAAAAGTTTGGTTTTACAGAAGATGAGACATTTGCTCTGCTTGGACGATCTCCCCTTATCTTGACTCTATCAGTCGATAAAGTGCAAAGGAACATGACTTTCATCTTGTGCACGTTGAAGTTACCTGCTAAAGTTATTCTTAACTACCCATTTCTATTATATTTTAACCTGGAAGCTGTCTTGAAGCCACGGGTGCTTCTCTCAGGGAAGATGGAGGAAATGGGTCTCCATCTGCAGATCAAAGGCCGTTCAATGCTCAGGGCTCTTAGGATGACAGAGAAGAGATTCTTGAAGAAATTTGTTTACAGTCAACCAAAAGATGTTGCTGATGAGTTGATGCAGTTCTATCAAAGTGCAAAAGGCATTAAGCGTTTGGCCGAAACCTCAAGGAAGAACTGTCCTAGGGGATTTCCTTTCTGA

mRNA sequence

ATGAAATCCAGAGTTGTGGATTATTTCAAGCTCTGCTATTTACTATCTTCCAGGCAAGCATTTGTTTCCATTTTAGTGAACCAACCTTTAGAAGCTTGGCAAAAATTAAAGGTTGCCACTTGTTCAACAGTAAGTGTCAAACAAGTTGAAGAGGAGGTGGGAGAAGGGGCGGTGGCACATGCCAATGACCCTACTGAAGTTTTCCAGAGATGGGGTTGTACTGACAATGATATTGCACAAATCTTTGCACGTGGGCCTTCTCTGCGCAGGAGTGACTTAAACCAACTACAAAAAAAACTCCACCTGCTACAAGGCCTAGGGATCACATCTCCCGACCTTGTGAAGATCGTTAATTGTCGTCCCCGGTTTCTCAAATGTCGGATCAACAACAACTTCGATGAGCGGATTGAGTTTTTCTTGAAAATGTTTGAATCTAAAGAAGTTCTTGTCAAAGCCATTGTAAGAAACCCCTCACTTTTGACTTATGATTTCCATAATAGTGTCAAACCTGTAATTTCCCAGTATGAAGAAATTGGTCTTAGTAAAAAGGATTTGATTCCCATGCTTATATCTCGCCCCACATTGATTCCAAGATCTTCATTTAATGATGAGAAGATGGAATACATACAAAAAACAGGGCTTTCAAAGGGTGACAAGATGTTCAAATACGTCGTTACAATCATTGGTATCTCACGACTTGAAACGATCCGTCAAAAAGTAGCCAATTTGGAAAAGTTTGGTTTTACAGAAGATGAGACATTTGCTCTGCTTGGACGATCTCCCCTTATCTTGACTCTATCAGTCGATAAAGTGCAAAGGAACATGACTTTCATCTTGTGCACGTTGAAGTTACCTGCTAAAGTTATTCTTAACTACCCATTTCTATTATATTTTAACCTGGAAGCTGTCTTGAAGCCACGGGTGCTTCTCTCAGGGAAGATGGAGGAAATGGGTCTCCATCTGCAGATCAAAGGCCGTTCAATGCTCAGGGCTCTTAGGATGACAGAGAAGAGATTCTTGAAGAAATTTGTTTACAGTCAACCAAAAGATGTTGCTGATGAGTTGATGCAGTTCTATCAAAGTGCAAAAGGCATTAAGCGTTTGGCCGAAACCTCAAGGAAGAACTGTCCTAGGGGATTTCCTTTCTGA

Coding sequence (CDS)

ATGAAATCCAGAGTTGTGGATTATTTCAAGCTCTGCTATTTACTATCTTCCAGGCAAGCATTTGTTTCCATTTTAGTGAACCAACCTTTAGAAGCTTGGCAAAAATTAAAGGTTGCCACTTGTTCAACAGTAAGTGTCAAACAAGTTGAAGAGGAGGTGGGAGAAGGGGCGGTGGCACATGCCAATGACCCTACTGAAGTTTTCCAGAGATGGGGTTGTACTGACAATGATATTGCACAAATCTTTGCACGTGGGCCTTCTCTGCGCAGGAGTGACTTAAACCAACTACAAAAAAAACTCCACCTGCTACAAGGCCTAGGGATCACATCTCCCGACCTTGTGAAGATCGTTAATTGTCGTCCCCGGTTTCTCAAATGTCGGATCAACAACAACTTCGATGAGCGGATTGAGTTTTTCTTGAAAATGTTTGAATCTAAAGAAGTTCTTGTCAAAGCCATTGTAAGAAACCCCTCACTTTTGACTTATGATTTCCATAATAGTGTCAAACCTGTAATTTCCCAGTATGAAGAAATTGGTCTTAGTAAAAAGGATTTGATTCCCATGCTTATATCTCGCCCCACATTGATTCCAAGATCTTCATTTAATGATGAGAAGATGGAATACATACAAAAAACAGGGCTTTCAAAGGGTGACAAGATGTTCAAATACGTCGTTACAATCATTGGTATCTCACGACTTGAAACGATCCGTCAAAAAGTAGCCAATTTGGAAAAGTTTGGTTTTACAGAAGATGAGACATTTGCTCTGCTTGGACGATCTCCCCTTATCTTGACTCTATCAGTCGATAAAGTGCAAAGGAACATGACTTTCATCTTGTGCACGTTGAAGTTACCTGCTAAAGTTATTCTTAACTACCCATTTCTATTATATTTTAACCTGGAAGCTGTCTTGAAGCCACGGGTGCTTCTCTCAGGGAAGATGGAGGAAATGGGTCTCCATCTGCAGATCAAAGGCCGTTCAATGCTCAGGGCTCTTAGGATGACAGAGAAGAGATTCTTGAAGAAATTTGTTTACAGTCAACCAAAAGATGTTGCTGATGAGTTGATGCAGTTCTATCAAAGTGCAAAAGGCATTAAGCGTTTGGCCGAAACCTCAAGGAAGAACTGTCCTAGGGGATTTCCTTTCTGA

Protein sequence

MKSRVVDYFKLCYLLSSRQAFVSILVNQPLEAWQKLKVATCSTVSVKQVEEEVGEGAVAHANDPTEVFQRWGCTDNDIAQIFARGPSLRRSDLNQLQKKLHLLQGLGITSPDLVKIVNCRPRFLKCRINNNFDERIEFFLKMFESKEVLVKAIVRNPSLLTYDFHNSVKPVISQYEEIGLSKKDLIPMLISRPTLIPRSSFNDEKMEYIQKTGLSKGDKMFKYVVTIIGISRLETIRQKVANLEKFGFTEDETFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNLEAVLKPRVLLSGKMEEMGLHLQIKGRSMLRALRMTEKRFLKKFVYSQPKDVADELMQFYQSAKGIKRLAETSRKNCPRGFPF

Homology

[Close]

BLAST of Lsi01G010220 vs. ExPASy TrEMBL
Match: A0A6J1E035 (uncharacterized protein LOC111024679 OS=Momordica charantia OX=3673 GN=LOC111024679 PE=3 SV=1)

HSP 1 Score: 653.3 bits (1684), Expect = 6.3e-184
Identity = 334/382 (87.43%), Postives = 357/382 (93.46%), Query Frame = 0


Query: 1   MKSRVVDYFKLCYLLSSRQAFVSILVNQPLEAWQKLKVATCSTVSVKQVEEEVGEGAVAH 60
           MK++V  +FKL YLL SRQAF SIL NQPLEA Q L+VATCSTVS  QV E VG+G +AH
Sbjct: 1   MKTKVEAFFKLRYLLCSRQAFASILRNQPLEASQNLRVATCSTVSANQV-EGVGKGTLAH 60

Query: 61  ANDPTEVFQRWGCTDNDIAQIFARGPSLRRSDLNQLQKKLHLLQGLGITSPDLVKIVNCR 120
           AND +EVF+RWGCTDNDIA+IFARGPSLRRSDL QLQ KLHLL+GLGITSPDLVKI+NCR
Sbjct: 61  ANDSSEVFRRWGCTDNDIAKIFARGPSLRRSDLKQLQNKLHLLKGLGITSPDLVKIINCR 120

Query: 121 PRFLKCRINNNFDERIEFFLKMFESKEVLVKAIVRNPSLLTYDFHNSVKPVISQYEEIGL 180
           PRFLKCRINNNF +RIEFFLKMFESKEVL+KAIVRNPSLLTYDFHN +KPVIS YEE+GL
Sbjct: 121 PRFLKCRINNNFHDRIEFFLKMFESKEVLIKAIVRNPSLLTYDFHNRIKPVISLYEEMGL 180

Query: 181 SKKDLIPMLISRPTLIPRSSFNDEKMEYIQKTGLSKGDKMFKYVVTIIGISRLETIRQKV 240
           SKKDLI MLISRPTLIPRSSFNDEK+EYIQKTGLSKGDKM+KYVVTI+GISRLETIRQKV
Sbjct: 181 SKKDLILMLISRPTLIPRSSFNDEKLEYIQKTGLSKGDKMYKYVVTIMGISRLETIRQKV 240

Query: 241 ANLEKFGFTEDETFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNL 300
           ANLEKFGFT+DE FALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNL
Sbjct: 241 ANLEKFGFTDDEIFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNL 300

Query: 301 EAVLKPRVLLSGKMEEMGLHLQIKGRSMLRALRMTEKRFLKKFVYSQPKDVADELMQFYQ 360
           EAVLKPRVLLSGKMEEMGLHLQIKGR+MLRALRMTEKRFLK FV SQPK VADELM+FYQ
Sbjct: 301 EAVLKPRVLLSGKMEEMGLHLQIKGRAMLRALRMTEKRFLKTFVNSQPKVVADELMEFYQ 360

Query: 361 SAKGIKRLAETSRKNCPRGFPF 383
           SAKG+KRLAETS+KNC RGFPF
Sbjct: 361 SAKGVKRLAETSKKNCCRGFPF 381

[Close]

BLAST of Lsi01G010220 vs. ExPASy TrEMBL
Match: A0A6J1IQK9 (uncharacterized protein LOC111478530 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478530 PE=3 SV=1)

HSP 1 Score: 637.5 bits (1643), Expect = 3.6e-179
Identity = 328/382 (85.86%), Postives = 347/382 (90.84%), Query Frame = 0


Query: 1   MKSRVVDYFKLCYLLSSRQAFVSILVNQPLEAWQKLKVATCSTVSVKQVEEEVGEGAVAH 60
           MKSR V  FKLCYLL SRQAF SILVN      QKLKVA+CSTVS KQVEEEVGEG +AH
Sbjct: 1   MKSRAVGCFKLCYLLPSRQAFASILVN------QKLKVASCSTVSAKQVEEEVGEGPLAH 60

Query: 61  ANDPTEVFQRWGCTDNDIAQIFARGPSLRRSDLNQLQKKLHLLQGLGITSPDLVKIVNCR 120
           AND TEVF+RWGC D+DIAQIFARGPSLRRSDLNQLQ KL LLQGLGITSPDLVKI+NC 
Sbjct: 61  ANDSTEVFRRWGCADDDIAQIFARGPSLRRSDLNQLQDKLQLLQGLGITSPDLVKIINCY 120

Query: 121 PRFLKCRINNNFDERIEFFLKMFESKEVLVKAIVRNPSLLTYDFHNSVKPVISQYEEIGL 180
           PRFLKCRINNNF ERIEFFLKMFESKEVL+KAIVRNP LLT DFHN +KP ISQYEE+GL
Sbjct: 121 PRFLKCRINNNFHERIEFFLKMFESKEVLIKAIVRNPLLLTSDFHNKIKPAISQYEELGL 180

Query: 181 SKKDLIPMLISRPTLIPRSSFNDEKMEYIQKTGLSKGDKMFKYVVTIIGISRLETIRQKV 240
           S+KDLI ML+SRPTLIPRSSFNDEKM YIQKTGL+ GDKM+KY+VTIIGISRLETIRQKV
Sbjct: 181 SRKDLILMLLSRPTLIPRSSFNDEKMGYIQKTGLTHGDKMYKYIVTIIGISRLETIRQKV 240

Query: 241 ANLEKFGFTEDETFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNL 300
           ANLEKFGFTEDETF LLGRSPLILTLSVDKVQRNMTFILCTL+LPAK+ILNYPFL+Y NL
Sbjct: 241 ANLEKFGFTEDETFTLLGRSPLILTLSVDKVQRNMTFILCTLRLPAKIILNYPFLVYLNL 300

Query: 301 EAVLKPRVLLSGKMEEMGLHLQIKGRSMLRALRMTEKRFLKKFVYSQPKDVADELMQFYQ 360
           E VLKPRVLLS KMEEMGLH+QIKG  MLRALRMTEKRFLK+FV SQPKDVADELMQFYQ
Sbjct: 301 EEVLKPRVLLSEKMEEMGLHIQIKGGLMLRALRMTEKRFLKRFVNSQPKDVADELMQFYQ 360

Query: 361 SAKGIKRLAETSRKNCPRGFPF 383
           SAKGIKRLAETSRK+  RGFPF
Sbjct: 361 SAKGIKRLAETSRKSHRRGFPF 376

[Close]

BLAST of Lsi01G010220 vs. ExPASy TrEMBL
Match: A0A6J1IUG6 (uncharacterized protein LOC111478530 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478530 PE=3 SV=1)

HSP 1 Score: 637.5 bits (1643), Expect = 3.6e-179
Identity = 328/382 (85.86%), Postives = 347/382 (90.84%), Query Frame = 0


Query: 1   MKSRVVDYFKLCYLLSSRQAFVSILVNQPLEAWQKLKVATCSTVSVKQVEEEVGEGAVAH 60
           MKSR V  FKLCYLL SRQAF SILVN      QKLKVA+CSTVS KQVEEEVGEG +AH
Sbjct: 73  MKSRAVGCFKLCYLLPSRQAFASILVN------QKLKVASCSTVSAKQVEEEVGEGPLAH 132

Query: 61  ANDPTEVFQRWGCTDNDIAQIFARGPSLRRSDLNQLQKKLHLLQGLGITSPDLVKIVNCR 120
           AND TEVF+RWGC D+DIAQIFARGPSLRRSDLNQLQ KL LLQGLGITSPDLVKI+NC 
Sbjct: 133 ANDSTEVFRRWGCADDDIAQIFARGPSLRRSDLNQLQDKLQLLQGLGITSPDLVKIINCY 192

Query: 121 PRFLKCRINNNFDERIEFFLKMFESKEVLVKAIVRNPSLLTYDFHNSVKPVISQYEEIGL 180
           PRFLKCRINNNF ERIEFFLKMFESKEVL+KAIVRNP LLT DFHN +KP ISQYEE+GL
Sbjct: 193 PRFLKCRINNNFHERIEFFLKMFESKEVLIKAIVRNPLLLTSDFHNKIKPAISQYEELGL 252

Query: 181 SKKDLIPMLISRPTLIPRSSFNDEKMEYIQKTGLSKGDKMFKYVVTIIGISRLETIRQKV 240
           S+KDLI ML+SRPTLIPRSSFNDEKM YIQKTGL+ GDKM+KY+VTIIGISRLETIRQKV
Sbjct: 253 SRKDLILMLLSRPTLIPRSSFNDEKMGYIQKTGLTHGDKMYKYIVTIIGISRLETIRQKV 312

Query: 241 ANLEKFGFTEDETFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNL 300
           ANLEKFGFTEDETF LLGRSPLILTLSVDKVQRNMTFILCTL+LPAK+ILNYPFL+Y NL
Sbjct: 313 ANLEKFGFTEDETFTLLGRSPLILTLSVDKVQRNMTFILCTLRLPAKIILNYPFLVYLNL 372

Query: 301 EAVLKPRVLLSGKMEEMGLHLQIKGRSMLRALRMTEKRFLKKFVYSQPKDVADELMQFYQ 360
           E VLKPRVLLS KMEEMGLH+QIKG  MLRALRMTEKRFLK+FV SQPKDVADELMQFYQ
Sbjct: 373 EEVLKPRVLLSEKMEEMGLHIQIKGGLMLRALRMTEKRFLKRFVNSQPKDVADELMQFYQ 432

Query: 361 SAKGIKRLAETSRKNCPRGFPF 383
           SAKGIKRLAETSRK+  RGFPF
Sbjct: 433 SAKGIKRLAETSRKSHRRGFPF 448

[Close]

BLAST of Lsi01G010220 vs. ExPASy TrEMBL
Match: A0A6J1BYX5 (uncharacterized protein LOC111005954 OS=Momordica charantia OX=3673 GN=LOC111005954 PE=3 SV=1)

HSP 1 Score: 637.5 bits (1643), Expect = 3.6e-179
Identity = 324/382 (84.82%), Postives = 351/382 (91.88%), Query Frame = 0


Query: 1   MKSRVVDYFKLCYLLSSRQAFVSILVNQPLEAWQKLKVATCSTVSVKQVEEEVGEGAVAH 60
           MK++V  +FKL YL  SRQAF SIL  QPLE  Q L+VATCSTVS  QV E  GEG +AH
Sbjct: 1   MKTKVEAFFKLRYLQCSRQAFASILRKQPLETSQNLRVATCSTVSANQV-EGAGEGTLAH 60

Query: 61  ANDPTEVFQRWGCTDNDIAQIFARGPSLRRSDLNQLQKKLHLLQGLGITSPDLVKIVNCR 120
           AND ++VF+RWGCTDNDIA+IFARGPSL RSDLNQLQ KLHLL+GLGITSPDLVKI+NCR
Sbjct: 61  ANDSSDVFRRWGCTDNDIAKIFARGPSLLRSDLNQLQNKLHLLKGLGITSPDLVKIINCR 120

Query: 121 PRFLKCRINNNFDERIEFFLKMFESKEVLVKAIVRNPSLLTYDFHNSVKPVISQYEEIGL 180
           PRFLKCRINNNF ERI FFLK+FESKEVL+KAIVRNPSLLTYDFHN +KPVIS YEE+GL
Sbjct: 121 PRFLKCRINNNFHERIAFFLKIFESKEVLIKAIVRNPSLLTYDFHNRIKPVISLYEEMGL 180

Query: 181 SKKDLIPMLISRPTLIPRSSFNDEKMEYIQKTGLSKGDKMFKYVVTIIGISRLETIRQKV 240
           SKKDLI MLISRP+LIPRSSFNDEK++YIQKTGLSKGDKM+KYVVTI+GISRLETIRQKV
Sbjct: 181 SKKDLILMLISRPSLIPRSSFNDEKLKYIQKTGLSKGDKMYKYVVTIMGISRLETIRQKV 240

Query: 241 ANLEKFGFTEDETFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNL 300
           ANLEKFGFT+DE FALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVIL+YPFL YFNL
Sbjct: 241 ANLEKFGFTDDEIFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILSYPFLFYFNL 300

Query: 301 EAVLKPRVLLSGKMEEMGLHLQIKGRSMLRALRMTEKRFLKKFVYSQPKDVADELMQFYQ 360
           +A+LKPRVLLSGKMEEMGLHLQIKG +MLRALRMTEKRFLK FV SQPKDVADELM+FYQ
Sbjct: 301 DAILKPRVLLSGKMEEMGLHLQIKGHAMLRALRMTEKRFLKTFVNSQPKDVADELMEFYQ 360

Query: 361 SAKGIKRLAETSRKNCPRGFPF 383
           SAKGIKRLAETS+KNC RGFPF
Sbjct: 361 SAKGIKRLAETSKKNCSRGFPF 381

[Close]

BLAST of Lsi01G010220 vs. ExPASy TrEMBL
Match: A0A6J1GFZ6 (uncharacterized protein LOC111453817 OS=Cucurbita moschata OX=3662 GN=LOC111453817 PE=3 SV=1)

HSP 1 Score: 622.5 bits (1604), Expect = 1.2e-174
Identity = 323/382 (84.55%), Postives = 343/382 (89.79%), Query Frame = 0


Query: 1   MKSRVVDYFKLCYLLSSRQAFVSILVNQPLEAWQKLKVATCSTVSVKQVEEEVGEGAVAH 60
           MKSR V  FKLCYLLSSRQAF SILVN      QKLKVA+CSTVS KQVEE+VGE  +AH
Sbjct: 1   MKSRAVGCFKLCYLLSSRQAFASILVN------QKLKVASCSTVSAKQVEEKVGERPLAH 60

Query: 61  ANDPTEVFQRWGCTDNDIAQIFARGPSLRRSDLNQLQKKLHLLQGLGITSPDLVKIVNCR 120
           AND TEVF+RWGC D+DIAQIFAR PSLRRSDLN LQ KL LLQG+GITSPDLVKI+NC 
Sbjct: 61  ANDSTEVFRRWGCADDDIAQIFARRPSLRRSDLNLLQDKLQLLQGVGITSPDLVKIINCH 120

Query: 121 PRFLKCRINNNFDERIEFFLKMFESKEVLVKAIVRNPSLLTYDFHNSVKPVISQYEEIGL 180
           PRFLK RINNNF ERIEFFLKMFESKE L+KAIV+NP LLTYDFHN +KP ISQYEE+GL
Sbjct: 121 PRFLKGRINNNFHERIEFFLKMFESKEALIKAIVKNPLLLTYDFHNKIKPAISQYEELGL 180

Query: 181 SKKDLIPMLISRPTLIPRSSFNDEKMEYIQKTGLSKGDKMFKYVVTIIGISRLETIRQKV 240
           S+KDLI ML+SRPTLIPRSSFNDEKM YIQKTGL+ GDKM+KY+VTIIGISRLETIRQKV
Sbjct: 181 SRKDLILMLLSRPTLIPRSSFNDEKMGYIQKTGLTHGDKMYKYIVTIIGISRLETIRQKV 240

Query: 241 ANLEKFGFTEDETFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNL 300
           A+LEKFGFTEDETF LLGRSPLILTLSVDKVQRNMTFILCTLKLPAK ILNYPFLLY NL
Sbjct: 241 AHLEKFGFTEDETFTLLGRSPLILTLSVDKVQRNMTFILCTLKLPAKSILNYPFLLYLNL 300

Query: 301 EAVLKPRVLLSGKMEEMGLHLQIKGRSMLRALRMTEKRFLKKFVYSQPKDVADELMQFYQ 360
           EAVLKPRVLLSGKMEEMGL +QIKG  MLRALRMTEKRFL+ FV SQPKDVADELMQFYQ
Sbjct: 301 EAVLKPRVLLSGKMEEMGLDIQIKGGLMLRALRMTEKRFLESFVNSQPKDVADELMQFYQ 360

Query: 361 SAKGIKRLAETSRKNCPRGFPF 383
           SAKGIKRLAETSRK+  RGFPF
Sbjct: 361 SAKGIKRLAETSRKSHRRGFPF 376

[Close]

BLAST of Lsi01G010220 vs. NCBI nr
Match: XP_022158121.1 (uncharacterized protein LOC111024679 [Momordica charantia])

HSP 1 Score: 653.3 bits (1684), Expect = 1.3e-183
Identity = 334/382 (87.43%), Postives = 357/382 (93.46%), Query Frame = 0


Query: 1   MKSRVVDYFKLCYLLSSRQAFVSILVNQPLEAWQKLKVATCSTVSVKQVEEEVGEGAVAH 60
           MK++V  +FKL YLL SRQAF SIL NQPLEA Q L+VATCSTVS  QV E VG+G +AH
Sbjct: 1   MKTKVEAFFKLRYLLCSRQAFASILRNQPLEASQNLRVATCSTVSANQV-EGVGKGTLAH 60

Query: 61  ANDPTEVFQRWGCTDNDIAQIFARGPSLRRSDLNQLQKKLHLLQGLGITSPDLVKIVNCR 120
           AND +EVF+RWGCTDNDIA+IFARGPSLRRSDL QLQ KLHLL+GLGITSPDLVKI+NCR
Sbjct: 61  ANDSSEVFRRWGCTDNDIAKIFARGPSLRRSDLKQLQNKLHLLKGLGITSPDLVKIINCR 120

Query: 121 PRFLKCRINNNFDERIEFFLKMFESKEVLVKAIVRNPSLLTYDFHNSVKPVISQYEEIGL 180
           PRFLKCRINNNF +RIEFFLKMFESKEVL+KAIVRNPSLLTYDFHN +KPVIS YEE+GL
Sbjct: 121 PRFLKCRINNNFHDRIEFFLKMFESKEVLIKAIVRNPSLLTYDFHNRIKPVISLYEEMGL 180

Query: 181 SKKDLIPMLISRPTLIPRSSFNDEKMEYIQKTGLSKGDKMFKYVVTIIGISRLETIRQKV 240
           SKKDLI MLISRPTLIPRSSFNDEK+EYIQKTGLSKGDKM+KYVVTI+GISRLETIRQKV
Sbjct: 181 SKKDLILMLISRPTLIPRSSFNDEKLEYIQKTGLSKGDKMYKYVVTIMGISRLETIRQKV 240

Query: 241 ANLEKFGFTEDETFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNL 300
           ANLEKFGFT+DE FALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNL
Sbjct: 241 ANLEKFGFTDDEIFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNL 300

Query: 301 EAVLKPRVLLSGKMEEMGLHLQIKGRSMLRALRMTEKRFLKKFVYSQPKDVADELMQFYQ 360
           EAVLKPRVLLSGKMEEMGLHLQIKGR+MLRALRMTEKRFLK FV SQPK VADELM+FYQ
Sbjct: 301 EAVLKPRVLLSGKMEEMGLHLQIKGRAMLRALRMTEKRFLKTFVNSQPKVVADELMEFYQ 360

Query: 361 SAKGIKRLAETSRKNCPRGFPF 383
           SAKG+KRLAETS+KNC RGFPF
Sbjct: 361 SAKGVKRLAETSKKNCCRGFPF 381

[Close]

BLAST of Lsi01G010220 vs. NCBI nr
Match: XP_038881817.1 (uncharacterized protein LOC120073205, partial [Benincasa hispida])

HSP 1 Score: 642.5 bits (1656), Expect = 2.3e-180
Identity = 329/364 (90.38%), Postives = 344/364 (94.51%), Query Frame = 0


Query: 19  QAFVSILVNQPLEAWQKLKVATCSTVSVKQVEEEVGEGAVAHANDPTEVFQRWGCTDNDI 78
           QAFVSILV+QPLEAWQ LKVATCSTVSVKQVE+EVGEGA+AHAND TEVF+RWGCTDNDI
Sbjct: 49  QAFVSILVSQPLEAWQTLKVATCSTVSVKQVEKEVGEGALAHANDFTEVFRRWGCTDNDI 108

Query: 79  AQIFARGPSLRRSDLNQLQKKLHLLQGLGITSPDLVKIVNCRPRFLKCRINNNFDERIEF 138
           AQIFARGPSLRRSDLNQLQ KLHLLQGLGITSPDLVKI+NCRPRFLKC INNNF E+IE 
Sbjct: 109 AQIFARGPSLRRSDLNQLQNKLHLLQGLGITSPDLVKIINCRPRFLKCWINNNFHEQIES 168

Query: 139 FLKMFESKEVLVKAIVRNPSLLTYDFHNSVKPVISQYEEIGLSKKDLIPMLISRPTLIPR 198
           FLK+FESKEVLVKAIVRNPSLLTYDFH+ VK VISQYEE+GLSKKDLI MLISRPTLIPR
Sbjct: 169 FLKIFESKEVLVKAIVRNPSLLTYDFHSRVKSVISQYEEMGLSKKDLILMLISRPTLIPR 228

Query: 199 SSFNDEKMEYIQKTGLSKGDKMFKYVVTIIGISRLETIRQKVANLEKFGFTEDETFALLG 258
           +SFNDEKMEYIQKTGLS+GDKMFKYVVTIIGISRLETIR KVANLEKFGFTEDE FALLG
Sbjct: 229 TSFNDEKMEYIQKTGLSQGDKMFKYVVTIIGISRLETIRHKVANLEKFGFTEDEIFALLG 288

Query: 259 RSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNLEAVLKPRVLLSGKMEEMG 318
           RSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNL+AVLKPRV L GKMEEMG
Sbjct: 289 RSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNLDAVLKPRVHLLGKMEEMG 348

Query: 319 LHLQIKGRSMLRALRMTEKRFLKKFVYSQPKDVADELMQFYQSAKGIKRLAETSRKNCPR 378
           LH+QIKG  +LRALRMTEKRFLKKF+YSQPKDVADELMQFYQ AKGIKRL ETSRK   R
Sbjct: 349 LHMQIKGHPLLRALRMTEKRFLKKFIYSQPKDVADELMQFYQIAKGIKRLGETSRKISYR 408

Query: 379 GFPF 383
           GFPF
Sbjct: 409 GFPF 412

[Close]

BLAST of Lsi01G010220 vs. NCBI nr
Match: XP_022978595.1 (uncharacterized protein LOC111478530 isoform X2 [Cucurbita maxima])

HSP 1 Score: 637.5 bits (1643), Expect = 7.4e-179
Identity = 328/382 (85.86%), Postives = 347/382 (90.84%), Query Frame = 0


Query: 1   MKSRVVDYFKLCYLLSSRQAFVSILVNQPLEAWQKLKVATCSTVSVKQVEEEVGEGAVAH 60
           MKSR V  FKLCYLL SRQAF SILVN      QKLKVA+CSTVS KQVEEEVGEG +AH
Sbjct: 1   MKSRAVGCFKLCYLLPSRQAFASILVN------QKLKVASCSTVSAKQVEEEVGEGPLAH 60

Query: 61  ANDPTEVFQRWGCTDNDIAQIFARGPSLRRSDLNQLQKKLHLLQGLGITSPDLVKIVNCR 120
           AND TEVF+RWGC D+DIAQIFARGPSLRRSDLNQLQ KL LLQGLGITSPDLVKI+NC 
Sbjct: 61  ANDSTEVFRRWGCADDDIAQIFARGPSLRRSDLNQLQDKLQLLQGLGITSPDLVKIINCY 120

Query: 121 PRFLKCRINNNFDERIEFFLKMFESKEVLVKAIVRNPSLLTYDFHNSVKPVISQYEEIGL 180
           PRFLKCRINNNF ERIEFFLKMFESKEVL+KAIVRNP LLT DFHN +KP ISQYEE+GL
Sbjct: 121 PRFLKCRINNNFHERIEFFLKMFESKEVLIKAIVRNPLLLTSDFHNKIKPAISQYEELGL 180

Query: 181 SKKDLIPMLISRPTLIPRSSFNDEKMEYIQKTGLSKGDKMFKYVVTIIGISRLETIRQKV 240
           S+KDLI ML+SRPTLIPRSSFNDEKM YIQKTGL+ GDKM+KY+VTIIGISRLETIRQKV
Sbjct: 181 SRKDLILMLLSRPTLIPRSSFNDEKMGYIQKTGLTHGDKMYKYIVTIIGISRLETIRQKV 240

Query: 241 ANLEKFGFTEDETFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNL 300
           ANLEKFGFTEDETF LLGRSPLILTLSVDKVQRNMTFILCTL+LPAK+ILNYPFL+Y NL
Sbjct: 241 ANLEKFGFTEDETFTLLGRSPLILTLSVDKVQRNMTFILCTLRLPAKIILNYPFLVYLNL 300

Query: 301 EAVLKPRVLLSGKMEEMGLHLQIKGRSMLRALRMTEKRFLKKFVYSQPKDVADELMQFYQ 360
           E VLKPRVLLS KMEEMGLH+QIKG  MLRALRMTEKRFLK+FV SQPKDVADELMQFYQ
Sbjct: 301 EEVLKPRVLLSEKMEEMGLHIQIKGGLMLRALRMTEKRFLKRFVNSQPKDVADELMQFYQ 360

Query: 361 SAKGIKRLAETSRKNCPRGFPF 383
           SAKGIKRLAETSRK+  RGFPF
Sbjct: 361 SAKGIKRLAETSRKSHRRGFPF 376

[Close]

BLAST of Lsi01G010220 vs. NCBI nr
Match: XP_022133358.1 (uncharacterized protein LOC111005954 [Momordica charantia])

HSP 1 Score: 637.5 bits (1643), Expect = 7.4e-179
Identity = 324/382 (84.82%), Postives = 351/382 (91.88%), Query Frame = 0


Query: 1   MKSRVVDYFKLCYLLSSRQAFVSILVNQPLEAWQKLKVATCSTVSVKQVEEEVGEGAVAH 60
           MK++V  +FKL YL  SRQAF SIL  QPLE  Q L+VATCSTVS  QV E  GEG +AH
Sbjct: 1   MKTKVEAFFKLRYLQCSRQAFASILRKQPLETSQNLRVATCSTVSANQV-EGAGEGTLAH 60

Query: 61  ANDPTEVFQRWGCTDNDIAQIFARGPSLRRSDLNQLQKKLHLLQGLGITSPDLVKIVNCR 120
           AND ++VF+RWGCTDNDIA+IFARGPSL RSDLNQLQ KLHLL+GLGITSPDLVKI+NCR
Sbjct: 61  ANDSSDVFRRWGCTDNDIAKIFARGPSLLRSDLNQLQNKLHLLKGLGITSPDLVKIINCR 120

Query: 121 PRFLKCRINNNFDERIEFFLKMFESKEVLVKAIVRNPSLLTYDFHNSVKPVISQYEEIGL 180
           PRFLKCRINNNF ERI FFLK+FESKEVL+KAIVRNPSLLTYDFHN +KPVIS YEE+GL
Sbjct: 121 PRFLKCRINNNFHERIAFFLKIFESKEVLIKAIVRNPSLLTYDFHNRIKPVISLYEEMGL 180

Query: 181 SKKDLIPMLISRPTLIPRSSFNDEKMEYIQKTGLSKGDKMFKYVVTIIGISRLETIRQKV 240
           SKKDLI MLISRP+LIPRSSFNDEK++YIQKTGLSKGDKM+KYVVTI+GISRLETIRQKV
Sbjct: 181 SKKDLILMLISRPSLIPRSSFNDEKLKYIQKTGLSKGDKMYKYVVTIMGISRLETIRQKV 240

Query: 241 ANLEKFGFTEDETFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNL 300
           ANLEKFGFT+DE FALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVIL+YPFL YFNL
Sbjct: 241 ANLEKFGFTDDEIFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILSYPFLFYFNL 300

Query: 301 EAVLKPRVLLSGKMEEMGLHLQIKGRSMLRALRMTEKRFLKKFVYSQPKDVADELMQFYQ 360
           +A+LKPRVLLSGKMEEMGLHLQIKG +MLRALRMTEKRFLK FV SQPKDVADELM+FYQ
Sbjct: 301 DAILKPRVLLSGKMEEMGLHLQIKGHAMLRALRMTEKRFLKTFVNSQPKDVADELMEFYQ 360

Query: 361 SAKGIKRLAETSRKNCPRGFPF 383
           SAKGIKRLAETS+KNC RGFPF
Sbjct: 361 SAKGIKRLAETSKKNCSRGFPF 381

[Close]

BLAST of Lsi01G010220 vs. NCBI nr
Match: XP_022978594.1 (uncharacterized protein LOC111478530 isoform X1 [Cucurbita maxima])

HSP 1 Score: 637.5 bits (1643), Expect = 7.4e-179
Identity = 328/382 (85.86%), Postives = 347/382 (90.84%), Query Frame = 0


Query: 1   MKSRVVDYFKLCYLLSSRQAFVSILVNQPLEAWQKLKVATCSTVSVKQVEEEVGEGAVAH 60
           MKSR V  FKLCYLL SRQAF SILVN      QKLKVA+CSTVS KQVEEEVGEG +AH
Sbjct: 73  MKSRAVGCFKLCYLLPSRQAFASILVN------QKLKVASCSTVSAKQVEEEVGEGPLAH 132

Query: 61  ANDPTEVFQRWGCTDNDIAQIFARGPSLRRSDLNQLQKKLHLLQGLGITSPDLVKIVNCR 120
           AND TEVF+RWGC D+DIAQIFARGPSLRRSDLNQLQ KL LLQGLGITSPDLVKI+NC 
Sbjct: 133 ANDSTEVFRRWGCADDDIAQIFARGPSLRRSDLNQLQDKLQLLQGLGITSPDLVKIINCY 192

Query: 121 PRFLKCRINNNFDERIEFFLKMFESKEVLVKAIVRNPSLLTYDFHNSVKPVISQYEEIGL 180
           PRFLKCRINNNF ERIEFFLKMFESKEVL+KAIVRNP LLT DFHN +KP ISQYEE+GL
Sbjct: 193 PRFLKCRINNNFHERIEFFLKMFESKEVLIKAIVRNPLLLTSDFHNKIKPAISQYEELGL 252

Query: 181 SKKDLIPMLISRPTLIPRSSFNDEKMEYIQKTGLSKGDKMFKYVVTIIGISRLETIRQKV 240
           S+KDLI ML+SRPTLIPRSSFNDEKM YIQKTGL+ GDKM+KY+VTIIGISRLETIRQKV
Sbjct: 253 SRKDLILMLLSRPTLIPRSSFNDEKMGYIQKTGLTHGDKMYKYIVTIIGISRLETIRQKV 312

Query: 241 ANLEKFGFTEDETFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNL 300
           ANLEKFGFTEDETF LLGRSPLILTLSVDKVQRNMTFILCTL+LPAK+ILNYPFL+Y NL
Sbjct: 313 ANLEKFGFTEDETFTLLGRSPLILTLSVDKVQRNMTFILCTLRLPAKIILNYPFLVYLNL 372

Query: 301 EAVLKPRVLLSGKMEEMGLHLQIKGRSMLRALRMTEKRFLKKFVYSQPKDVADELMQFYQ 360
           E VLKPRVLLS KMEEMGLH+QIKG  MLRALRMTEKRFLK+FV SQPKDVADELMQFYQ
Sbjct: 373 EEVLKPRVLLSEKMEEMGLHIQIKGGLMLRALRMTEKRFLKRFVNSQPKDVADELMQFYQ 432

Query: 361 SAKGIKRLAETSRKNCPRGFPF 383
           SAKGIKRLAETSRK+  RGFPF
Sbjct: 433 SAKGIKRLAETSRKSHRRGFPF 448

[Close]

BLAST of Lsi01G010220 vs. TAIR 10
Match: AT1G79220.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 362.1 bits (928), Expect = 5.6e-100
Identity = 180/333 (54.05%), Postives = 251/333 (75.38%), Query Frame = 0


Query: 52  EVGEGAVAH--ANDPTEVFQRWGCTDNDIAQIFARGPSLRRSDLNQLQKKLHLLQGLGIT 111
           EVGE        + P +V +RWGC D++I+++F R P+L+R+++ QL+ KL LL+ LGIT
Sbjct: 69  EVGEKEKVRDITSSPLQVLRRWGCDDDEISKLFTRRPALQRANVAQLEFKLSLLKPLGIT 128

Query: 112 SPDLVKIVNCRPRFLKCRINNNFDERIEFFLKMFESKEVLVKAIVRNPSLLTYDFHNSVK 171
           S DLVKI+NCRPRF  CR+    DERI +F+++  SKEVL + I+RNPSL+ YD  + +K
Sbjct: 129 SSDLVKILNCRPRFFSCRL--VLDERINYFMEILGSKEVLRRVIIRNPSLMLYDLDDKIK 188

Query: 172 PVISQYEEIGLSKKDLIPMLISRPTLIPRSSFNDEKMEYIQKTGLSKGDKMFKYVVTIIG 231
           P I  Y+ +G S++DL+ MLISRPTLIPR++FN+EK EYI+KTG+++  KMFKYV  IIG
Sbjct: 189 PAIEYYKGLGFSQQDLVAMLISRPTLIPRTNFNNEKFEYIEKTGVTRESKMFKYVAVIIG 248

Query: 232 ISRLETIRQKVANLEKFGFTEDETFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVI 291
           +SR+ETI +KV NLEKFGF+E+E + L G+ P++L+LSV+KVQRNMTF++ ++KLPA  +
Sbjct: 249 VSRMETIEEKVRNLEKFGFSEEEIWHLYGKCPILLSLSVEKVQRNMTFVIASMKLPAHSV 308

Query: 292 LNYPFLLYFNLEAVLKPRVLLSGKMEEMGLHLQIKGRSMLRALRMTEKRFLKKFVYSQPK 351
           + +P LL  NLE+ LKPR  L  ++ EM L   IK  S+ RA+RM+EKRFLK +V   P+
Sbjct: 309 VKHPCLLLLNLESRLKPRADLVKRVLEMRLKPLIKEVSIFRAVRMSEKRFLKVYVMCHPQ 368

Query: 352 DVADELMQFYQSAKGIKRLAETSRKNCPRGFPF 383
           D+A ELM+FY+ +K +KRLAE S+K   +GFPF
Sbjct: 369 DIATELMEFYEKSKNMKRLAEKSKKYIRKGFPF 399

[Close]

BLAST of Lsi01G010220 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 77.0 bits (188), Expect = 3.6e-14
Identity = 69/273 (25.27%), Postives = 126/273 (46.15%), Query Frame = 0


Query: 96  LQKKLHLLQGLGITSPDLVKIVNCRPRFLKCRINNNFDERIEFFLKMFESKEVLVKAIVR 155
           L+ KL   + +G T   L K V+     +   +       +E    +   K   +  I+ 
Sbjct: 107 LEPKLRFFKDIGFTGSGLGKFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILS 166

Query: 156 NPS--LLTYDFHNSVKPVISQYEEIGLSKKDLIPMLISRPTLIPRSSFNDEKME-YIQKT 215
                LL+ D +  + P IS  E  G+    L  +L  +P +    + ++EK+  Y+ + 
Sbjct: 167 RCGWLLLSRDPNLFLLPNISYLETCGIVGSQLASLLRRQPRIF---NLSEEKLRGYVSRA 226

Query: 216 ---GLSKGDKMFKYVVTIIGISRLETIRQKVANLEKFGFTEDETFALLGRSPLILTLSVD 275
              G +   +M  + V  +     +T  +KV      GF+EDE   ++ RSP ++  S D
Sbjct: 227 LDLGFTLNSRMLVHAVISLSSLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSED 286

Query: 276 KVQRNMTFILCTLKLPAKVILNYPFLLYFNLEAVLKPRVLLSGKMEEMGLHL--QIKGRS 335
           K+     F L  + L  + +   P +L +NLE  + PR+ +   + E GL L  + K ++
Sbjct: 287 KLTLGFEFYLKRMGLEREALAKRPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKN 346

Query: 336 MLRALRMTEKRFLKKFVYSQPKDVADELMQFYQ 361
           M+  + MTE+ FL+K+V     ++A+EL+  Y+
Sbjct: 347 MVGIVEMTEEAFLEKYVVRFGDEIAEELLVAYK 376

[Close]

BLAST of Lsi01G010220 vs. TAIR 10
Match: AT1G62110.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 59.3 bits (142), Expect = 7.8e-09
Identity = 46/206 (22.33%), Postives = 92/206 (44.66%), Query Frame = 0


Query: 67  VFQRWGCTDNDIAQIFARGPSLRRSDLNQ-LQKKLHLLQGLGITSPDLVKIVNCRPRFLK 126
           +F+ +G T++ I+ I    P L   D  + L  KL  L+  G +SP+L +IV+  P+ L 
Sbjct: 90  LFRSYGFTNSQISSIITDYPRLLLIDAEKSLDIKLQFLESRGASSPELTQIVSTVPKILG 149

Query: 127 CRINNNFDERIEFFLKMFESKEVLVKAIVRNPSLLTYDFHNSVKPVISQYEEIGLSKKDL 186
            +   +     +F  ++ E+ +      +  P        N ++ V S   ++G+ +K L
Sbjct: 150 MKEGKSLGRYYDFVKEIIEADKSSKYETLCQPLPEANRQGNKIRNV-SVLRDLGVPQKLL 209

Query: 187 IPMLISRPTLIPRSSFNDEKMEYIQKTGLSKGDKMFKYVVTIIGISRLETIRQKVANLEK 246
             +LIS    +      +E ++ + + G       F   +  +     +TI ++V   + 
Sbjct: 210 FSLLISDAQPVCGKENFEESLKKVVEMGFDPTTSKFVQALRAVYRFTDKTIEERVNVYKG 269

Query: 247 FGFTEDETFALLGRSPLILTLSVDKV 272
           FGF  ++ +A+  + P  L  S  K+
Sbjct: 270 FGFAVEDVWAMFKKCPYFLNSSEKKI 294

[Close]

BLAST of Lsi01G010220 vs. TAIR 10
Match: AT2G34620.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 57.0 bits (136), Expect = 3.9e-08
Identity = 69/286 (24.13%), Postives = 118/286 (41.26%), Query Frame = 0


Query: 77  DIAQIFARGPSLRRSDLNQLQKKLHLLQGLGITSPDLVKIVNCRPRFLKCRINNNFDERI 136
           D  +  +  P L  + L+ +Q  LH LQ  GI   DL +I+   P+ L        D R 
Sbjct: 68  DSGKALSLNPCLCSAPLDSIQSVLHFLQSKGIYPNDLPRILGMCPKIL------TSDVRT 127

Query: 137 EFF-LKMFESKEVLV------KAIVRNPSLLTYDFHNSVKPVISQYEEIGLSKKDLIPML 196
           E + + MF S ++ V      + I + P LL     + +KP +   + +GL  KDL  + 
Sbjct: 128 ELYPVFMFLSNDLHVPENAFRRVIKKCPRLLISSVEDQLKPALFYLQRLGL--KDLEALA 187

Query: 197 ISRPTLIPRSSFNDEKMEYIQKTGLSKGDKMFKYVVTIIGISRLE-TIRQKVANLEKFGF 256
              P L+                                 +S +E T+  K+  LE  GF
Sbjct: 188 YQDPILL---------------------------------VSSVEHTLIPKLRFLESIGF 247

Query: 257 TEDETFALLGRSPLILTLSVD-KVQRNMTFILCTLKLPAKVILNYPFLLYFNLEAVLKPR 316
           +  E   ++ R P + T S++   +  + + +  +K   + +  +P    F+LE  +KPR
Sbjct: 248 SRPEAIGMILRCPALFTFSIENNFKPKLDYFMSEIKGKLENLKEFPQYFAFSLEKRIKPR 302

Query: 317 VLLSGKMEEMGLHLQIKGRSMLRALRMTEKRFLKKFVYSQPKDVAD 354
            L S    E GL L +        L+ T++ F  + + + P  VA+
Sbjct: 308 HLES---MERGLELPLS-----LMLKSTDEEF--EQLLTNPSSVAN 302

[Close]

BLAST of Lsi01G010220 vs. TAIR 10
Match: AT4G14605.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 45.4 bits (106), Expect = 1.2e-04
Identity = 55/210 (26.19%), Postives = 101/210 (48.10%), Query Frame = 0


Query: 162 YDFHNSVKPVISQYEEIGLSKKDLIPMLISRPTLIPRSSFNDEK--MEYIQKTGLSKGD- 221
           Y     +KPV+    ++G+ K D+  +L  RP +   S  ++ K  M +++  G+ K   
Sbjct: 226 YSLDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQW 285

Query: 222 -KMFKYVVTIIGISRLETIRQKVANLEKFGFTEDETFALLGRSPLILTLSV-DKVQRNMT 281
            K+      I+  SR + +   V  L + G TE++   +L R P I++ SV DK++  M 
Sbjct: 286 AKIISRFPAILTYSR-QKLTSTVEFLSQTGLTEEQIGRILTRCPNIMSYSVEDKLRPTME 345

Query: 282 FILCTLKLPAKVILN-YPFLLYFNLEAVLKPRV---LLSG-KMEEMGLHLQIKGRSMLRA 341
           +   +L +   V+L+  P     ++E+ LKP     L  G  ++E+G+ +   G     +
Sbjct: 346 YFR-SLNVDVAVLLHRCPQTFGLSIESNLKPVTEFFLEKGFGLDEIGIMISRYGALYTFS 405

Query: 342 LRMTEKRFLKKFVYSQPKDV-ADELMQFYQ 361
           L+   +  + K+ Y Q  D    EL++F Q
Sbjct: 406 LK---ENVMPKWDYFQTMDYPKSELVKFPQ 430

The following BLAST results are available for this feature:

BLAST of Lsi01G010220 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi01G010220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E035	6.3e-184	87.43	uncharacterized protein LOC111024679 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1IQK9	3.6e-179	85.86	uncharacterized protein LOC111478530 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1IUG6	3.6e-179	85.86	uncharacterized protein LOC111478530 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1BYX5	3.6e-179	84.82	uncharacterized protein LOC111005954 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A6J1GFZ6	1.2e-174	84.55	uncharacterized protein LOC111453817 OS=Cucurbita moschata OX=3662 GN=LOC1114538...	[more]

BLAST of Lsi01G010220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158121.1	1.3e-183	87.43	uncharacterized protein LOC111024679 [Momordica charantia]	[more]
XP_038881817.1	2.3e-180	90.38	uncharacterized protein LOC120073205, partial [Benincasa hispida]	[more]
XP_022978595.1	7.4e-179	85.86	uncharacterized protein LOC111478530 isoform X2 [Cucurbita maxima]	[more]
XP_022133358.1	7.4e-179	84.82	uncharacterized protein LOC111005954 [Momordica charantia]	[more]
XP_022978594.1	7.4e-179	85.86	uncharacterized protein LOC111478530 isoform X1 [Cucurbita maxima]	[more]

BLAST of Lsi01G010220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G79220.1	5.6e-100	54.05	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	3.6e-14	25.27	Mitochondrial transcription termination factor family protein	[more]
AT1G62110.1	7.8e-09	22.33	Mitochondrial transcription termination factor family protein	[more]
AT2G34620.1	3.9e-08	24.13	Mitochondrial transcription termination factor family protein	[more]
AT4G14605.1	1.2e-04	26.19	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 254..285 e-value: 150.0 score: 10.3 coord: 114..146 e-value: 48.0 score: 12.8 coord: 218..249 e-value: 220.0 score: 9.0 coord: 286..320 e-value: 330.0 score: 7.6 coord: 150..181 e-value: 0.23 score: 20.5 coord: 79..109 e-value: 430.0 score: 6.7
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 67..194 e-value: 1.8E-21 score: 76.4 coord: 125..340 e-value: 6.4E-33 score: 114.0
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 35..382
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 121..353 e-value: 9.4E-37 score: 128.6
None	No IPR available	PANTHER	PTHR13068:SF112	MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN	coord: 35..382

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G010220.1	Lsi01G010220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding