Lsi01G010110 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G010110
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	cyclin-H1-1
Location	chr01: 8382127 .. 8391392 (-)
RNA-Seq Expression	Lsi01G010110
Synteny	Lsi01G010110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTTGGCAATTTCCGATCAAATTAGTGCACACCCTCCGGCCCAACGCGCGCACATTGTTCGCAGCCACACAAAGCTCTCGCGTCTCTTGTTTCTCTCTCGAGCCGCCCGCTCACCACATCACAGGTGCGGCTCATACTGTTCATCTTTCTTCAACTATCCTTCAACGCTACTTGAAATTGCCGACTCCAGCTTTTTCTCAATTTCCTCAAGTAATTGAATCACTGCCGTGGCTGCTGTACTTAATTAAACAGCATATCTGACTGGTGGCGGCACTAAGGTTTCTGAGTAACCATGGCCGATTTCCAGACCTCGACTCAACGAGCCAAATGGATCTTGTCTCCTCAGGATCTGGTACTTTTCTCTTCCATTATTGTTTGGTTTTTTCTTTTATCTCGCGGTGGTTTGGGAAAACATGTATACTGCTACTGCTGGTACTAGATTCTCGTTGGCTTCTGACCAAAAGAACTTCCAGTAAACTTAGAATTTGATTATTTGAGATATTTCTTTCTCTCAATTTCCATGATATGTACAGTTTCATTGGATGATATTTTGTTTGTTTAGATTGCTTTATTAAGCAACTGGAGTTTCTTACTTCTATGGTACTTGTGCCAAGTGTATAGTCTTATTTTAATTGCTTTAGTTGGACGCGTTAGTTTTATTGTTATCTGTTCTATGACTTAAGGAGGACGTAACAAATTAGAAATGCGGAGTAGAGAATTAATTTAAAATTTGGTGCAGCATGTGGTCTTCCAGATGACAACTCTGAAGTGAACTTCATTTGATAAATTAGCTGGACGATTGTTGGCTTTTGAGGAGTTTTACTGGTTTTTAGGACTCGATGCAGAGTCAATGATGTATCTAAACTGTCAATTTACTGTTATGATAGAAAGTATGATCATTTCGATTCCCATGTTGTACAGGTTTACAGGTACAAAGCTGCTAACCAGAGAGCAATAGAAGCTCTGGATAAGGTATGAATAGAATGATATGATACTTAACCGGCCTTATCTACTGTACTAAATCTTAAACATCAGTTTTATCATGCTTCATTTCTTCCCAGAACTCTAAATTACTAACAGAAATTCCCTTCTTCACTTAATGTATTTGCCCCACTAAAAGCATTTGGCGTCTTCTTTGTAGATTTAGTTTTAATCTCTCTGTCAACTAAACCTCCTCTTGGTGTAGTTTGGAGCAACACTAATGGAAGTAGATGCTGACGGATCATTGTCATATCCAGACCCTCAGATGAATTCAAAAGATAATGGTAACTGCTCTTCTGCTGCTCTTTTGCAAGAACTTAAAACTTTTAACTTTAGTATTAAATCTTTATGTCTAAATACCAACTCTTGGTATGATAGTTTTTTTTAATGTCAGCTGACAAACATTCTCGCCCCAAATCGTTGAGTATTGAAGAAGAGCAATTTATGCGAGTATTTTACGAAAACAAACTTCAAGAAGTATGCAACAATTTTCATTTTCCTCATAAAATCCAGGTATTCAGATAAGATAAGCTGATTGTATGACCTGTATTTCTTTCCCATAAAGCTTTTTATGTATTTTAAATATATTTTGTTTATATGAATCCTTCTTTGCATGTTTTTCCTTATTTTTGTTGACTATGTGCAGGCAACAGCTCTAATATATTTTAAAAGATTCTACCTACAATGGTCCGTGATGCAACATAATCCAAAAAATGTGATGTAAGAGTTTAGATGTACATATGCTTGAAGCTTCCTTTTATTTACTGTGTTACAATAATTTGACTTTGCTGAAAATCATTTAGAGGTATGAATGTAGTTGAAATGCCTAGCACTAGATTATTATTATTATTATTTTTTGGGACTGCCTAGCAGTAGAAAAATTGCTTGGACGTGGGATGTACATTTGATATTACACATCGTCTTAGGAAATTTTGCTCCCTGCAACTTATTTCCCTCTCATTGTCACTTATTACTATCATACAAGCCGTGGAGTAGGTTTTTGATGTGGCTAACTGTCTCCTACACAGGTTAACCTGCATTTATGCAGCTTGTAAGATAGAAGAAAATCACGTCTCAGCTGAGGAGCTTGGTAAGGGGATTTCACAGGATCATCAAATTATTCTCAATTATGAGATGATAGTTTATCAGGCATGGATGTGCCACATAACTTGTTTTTATCTTAGGGTGCGCTTGGATTGATTTTTTAAGTGTTTAAATAAGTGTTTATAAGTGCAAAAAAAAGTGTGTATAAACACTTAGAAAGTCAATCCAAACAGGCCCTACTTCACTTCATTTATTTTTGCTGTGTTTTTTCTCCTCCTCTTCTCTTATTTCTGTCTCTGTTTTTCTAGAGTTTGGAATTTGATCTTATTGTTTATGCACCTTACCGATCAGTTGAAGGCTATATAAATGATATTGAGGTAAATAGTCTTTTTCTTTTTCTTCTTTTTTAACGTAGATTCTATAGGCAATGCTTAAACAAGATACATCTATTGTTTCTTGGGCATTCTTTACCTTCTTATAACATTGGTTACTACTTTTTCTTCTCTTTCATTGATGTTGCACTCGATGATAAATGGTGCATATTTTCAGGAACTCTTCCATGAGAATGCTGAAATGCTTCAAATGCTGAAGGTAATTGGCCTCATTGTTCAATGTTATTGATGTACTGTAGTATGGGTATTTCCAGTCTTCCAGTTTTTATAGTAGACCTGTTTGATCAAAGAAATCCAGTGCATATGTTGACAAGAAATAAACGCATTGATCAGACAAATAAAACAAGGGGCAGCTAGGAGTCACCCTTAAAACGTCGCCTAGGGGGTGTTTGGCCCCCCAAGTTGGGTTGGGTTGGGTGGGTAAAAAAAACCCACTCACCATTTGGTTCACCAATAATTAATGATGTTTATTACCTCATTATTCGCATTAACTCACATTTCTCACCTCGTTATTCGTGTCAACTCCTCCAATTACTCCCCACCTATAATAATTACCAACTCAACTCAACTCAACTCACTTCTTTTCACAGCAACCAAACACCCCCTGGTAAGTAATTGTTTTTACTTAAGATAGCTTCACAACTTTCTCAACTTCAATTGTTGTAAGATCTGCACGTATTCTTTGGGATTTTCAGAAGTATATTTAGGAAGAAAATAGAGTGAGATGAGAAGTGACTTCTGTTAGGAAAAACGTCACCCTTTTAATTTTATTAGGCAGCAAATTTTCTATTATGTTTTGTTACACATGTGAAGTTGCACTCTCGTATGCTTGTAATATGGTTTTTTCTTTAGTTCAAACTAGGGGTGGGGTGGGTTTCTAGCCTCTAACCTTTAGGATAGTTTATTGGTTGACATACTTATAACATAGTTACATCAAGAAATAGTCGATATTTTTTATCTGTTTCTGTTTTTCTTTTAGCTTTATTTGATATCTTTGATTATTTACATAATAGATTTCGAACAAAATTGTCTCATTGTAATTTACATAGAAGTCCACTATTTATATAAAAATTACTTTTTGTTGATTTTATTTGTGGCTTCTGCAGGAAACAGCATCATTAGAGGTTGATAAAATTATGTTAACGGATGCCCCACTTCTCTTCCCCCCTGGGCAGGTGCTTATTTTCTATTATACTTCCAGTACTAATTTTCTACTTTAGGACTTGAAGCTTTCTACCTTGATTCTTTAAATGTCTTGGTAAGTGAGTACTGGATTGAGCTTAAACTTTTGAATTTACCTTAGGCTAATCATTTCTTCAATTTAACACGTCTAGATGGCGTTCTGTTTCGTGGTTCAATAAAGAAGCTCAGCTTTTATAGTTGACATGTCTGGATCATATCGATGTTCAGAAGTTGCAAAACTAAGTTGTGACTTAGTTTATTTGACAAACCACAGTAATCTATCCCTTCAAGTATGAGAGTTTGTATCTTAAATAGTAGATCAAATAGGTGAAATTTCCATGGAGAGGAAGAGGAATGGCTGGCCCCTGGGTTATGCATAAAATAACTTGATGACGAACATGATATAGCAACGCATAGAAACTAGGTTTATGCTGCCAATGAATCCTAGGAAAGTGGAGTGTGGAATTTTGTTAACATGCCCTTTCAGGGAGGGAGGGAGGGGGGACTATTAACATGCCCTTTCAGGGAGGTGGAGTTTTGTTAAAGGTCTCGGTTCATTCCTCTTTAGGTTCCTATTCAGTAATTATATTTTATAATTTGATAACTTTATCACGTACTATTTAATCGGTCTTATTGATCACATGCAGTTAGCATTGGCTGCATTGCGCAGATCAAATGAAGTTCATGGAGTTATTGACTTCGATAGGTGAAAATTTTACTTATCTACATTCGTTGTGTTATTTAAAAATTTCCATGTCACAGAAATTTACACTGGTGGATTTGTTTTCTTATCCTCTTAGAGAGTTCTTTAGAGATTGAAATTCTGTTGAAGTCCTTGTATTTGGTTGGTAGTCTTTTTTGGCCTTCTAATGTCCTTTTATTTATTTATTTATTTAATTTTTTTTTAAAAAAAATGAGAAATGGTGGAGAATTACTTTGTAATCGTCCTTTGGTGTGTTAACATTTAACAATTTGAGCCTTCTTATAAGTTTGGCTCCTTTGTCTGGGTGCAAGTGTACATCTCTCTTTAGTTCTTTTAATCTCGCATCTCTTTTGACGAATTGGAGAAGTCTCTTGTAACTCCGATGGCTTGGGCTTTTGCCATTTTTTTTGTAAATTTCTTACATCAAAGAAATTTGTTATTTATTTATTTATTTATTTTTAGGGCTCTTTTCAAATATAGAAAAATAAACTAAACTATTTACAAATATAGAAAAATTTTATAGTCTATCACTGATAGATCGCGATAGAATTCTATCGCGGTCTATTACTGATAGACAGTGAAATTTTTCTATATTTGTAAATAGTTTGATATTTTTTCTGTTTATAGTAATTTCCCTTATTTTTATTTTTATTATTATTGTTATTTTAAAAAAACTCTGCCTCTTCTGGATTTTTTTTTTTTTTTGTATGAAAGTGAAACTATGATCTTAATTTTATGCTGGTTGTGTCGAACCCTGTGGAGGGTAGGGGTTCAGTCATTAGGAACACGTGGTTAAATAATTAGGCTCTTTTGTGAAATGGTTTTGGCATTTCTTCATGGAGCCAAATGGCCGCAGTGGAGGATTATTGTAAGTATGCCCCTTTTAATAGGTTGACGGGTTCTAGCAAAAACCTCTACTTCACTTTTGCTTCGGGCTTTCTCTTGTTTTCTCTGTCAGTTAAATGCTCTATTGGGGACGACTTAAGTGCCTATTTTTGGGAGGATTCTTAGGCAAGAGAAAGACCCTTTTGTGCTTTGTTTCCACATGTTTATCATTTGTATGATTAGAGGAAGCATTCAACAGCCTTTGTTTTGCCCTCTTTGGATAATTCTTCCTCACTTTCCCTGAATTTTTACTGCCCCCTCCTTGAGTGAGAGGCAGTTGAAGCTGTCAGTCTCCTTTTATTATTTTTTACCAGGTGACTTGTCATGGGCGAAGGGATTCTAGACTTTGGGTTCTTAAGCCTTTTGAAGGTTGCTCTTGGAGCTATTTTTTCATATCTTTTTTACCCCCCCAAGGAGCCTTTGTGTTCACTCTTTAGAATCTTAAAATTCCTAAGAATGTGAAGTTGTTTGCATGACAAGTGAACGCTATAGACTTGTTTATTTTGTTTGTAGGCGTAAAGGTGTGTTCTTTGCAGGAAGTAGGAGGAGAACCTGGCCATCTTTTATGGGAGTGCCCTTTTGTTTGATTCTTTTGGAGTCAGTTTTTGAAGACTTTCGGGGTTGTTATAGCTCGTAACATAGGGTGTTGTATGCTTGTGGAAGTTTTTCTAAATCCTCATTTTTACAATAAAGGAAGTGATATGAAAATCCTAGAAATTTGTAAATTAAGAACCCTTTAGTTGAACCCCTAACAAGTTCTCAAACCCTCAAATCAATTGACGTCAATTCAAAGGAAAATATTAGAATTAGATTACCTTTTGATCGAAGACCAAGAGATAAGAACTAGTCCTCTACTCAAGGTTTGAACGCTCCACAAATAGGTCGATCAATCTTACCTGAATGCTCAAGCATGCAACCCTAGATCAAGAATTGCAAAAGGTTGGTGATGAATCTCTGTCATCAACACAAAGGAAAATTATCATTCCCAAAATTCAAAATCCAAAAACTATCCTCAACAACCTAATGGTCATGCTTTAAATAGTCTCTCAATAAAAAAAACTCTAATGCATCATAGTTCAATAATAAAAGAAAAAAATAACCCAACTTAAAATACCATAACAATGATAAAAATAGAAAATACTAAAATTACATCAAAATTATTAAATAAAACATAAATAATAATTTGATGCCCCGGACGGTTCATATCATCCTCTCCTCCTTTTGACGGATTCGTCCTTGAATCCATTTCAAAGCCTTGTAAAGCAGTTTAAAGTCATCAGAAGAAAATGATGTTAATTTCCTAGCACTTCTCTTTATGATCTCCCTTGTAAAGCAATGTTGTGGTCATGAGATGTCAAAGGTTGACATTGTCTTGGACTCCATCTAATTTGGAAATTGGAAAGAATATCGGTACTTTTAATCCTCATTCAATTTGTGACCATCCAAGGAACTAAGACCAATTTTTGCGCTTTGCTTCAAAATCAATGCTTTAGCCTCCTGCAAAAATTCAAAAGAGAAACTAGGCGAACTTGGTTGAAGCTCACCTGTTAGAAAACAAACTCTTTTGTGAAAAAGGTCTTAAATCTTTCTTGTTAAATGTTATGAAAACCCTAGCAATTTAAAAATTAAGAACCCTTTAGTTGAACCCCTAACAACATTCTAAAACCCCCCAAATCATTTGACGTCAATCCAAAGGAAAGGATTAGAGTTGGATTACCTTTTGATCGAAGACCAAGAGATAAGAAAAACTAGTCGTCTACTCAAGGTTTGAACACTCCACAAGCAAGTTGATCGATCTTACCTAAATGCTCAAGCATGCAACCCTAGATCAAGAATTGCAAAAGGTTGGTGATGAATCTTTGTAATCAACACAAAGGAAAATTATCATTCCCAAAATTCAAAATCCAAAAACTATCCTCAACAACTTAATGTCAGACTTTAAATAGTCTCCCAAAAAAGGAACCCTAATACATCATAGTTCATAATAAAAGACAAAAATAACCCTACGTAAAATACCATAAAAAAGATAAAAATAAAAAAATGCTAAAATTACATCAAAATTAGGAAATAAACATAAATAATAATTTGATGCCCGGGACGGTTCATATCAGGAAGAGTTGTGGTTGTGGTAGACTTGTTTCTTTGCCACTTTGGGGCATTTGGCTTGAAAGAAATATTAGGATCTTTTGAGGGGTTGAGGGATCAGTGTGGTGCTTTGGGAGACGTGAAATACTTATCTTTGTGGGCGTTCTATAATTGAACTTTTTGTATTCCGTCTTATGATTAGCTTTAGGATCTCTCTCTCTCTCTTATTGTATGCCCTATATATTCTTTCATTTCTCTTCATGGAAGGTCTTCTTAAAAGGAAAAATTATGCTGCTTTCATTTATAGAAATCTGATCATGTTTAATTATTTATTGAATAATTAAAAAAATAAAATAAAATAAAAATTTCATCTCTTATTTTGGAAAGTGGCAACATGCTGTTGTTTCCATTCCTTTTATGCAATCAATCACTTATTCTTCTCAGTTTATGTGTAGCTACCTGGATAGTATCCTCTCTCGCCAGAATTCTGCACATACAATTTCCGAGCTCTACGAGCGTATAAATTCAATTGAATCATTGGTATGAAATTGTCTTTTCTTTTAACTGATTGAATTAGCAATCTAAAATTTAGACTGTAGTAGTAGTAATAGGAAGGCATAAATTTGTGTGCTTTTTGTACAGGTTAATAGATATGCCTTCCCTTCAGAAAAGGATTTAAAGCACATCAACCGAAAATTAAAATCTTGCTGGGGGCTGGGCTCCAATGACGAGTATTTTATACAATCTTGTGATACCTTAAAAAGAATTAGTCTACCTCTTGCTTAGTTTAGTACCCTCAAATTTTGTTTCCCAGCTGCTAATTACAAATTCCATCCAAAATTGGCAGGAGTAAGAAAAGGGAGAAGAAATCAAAGCACAAATCAAAGAAGAGCTCAAATGAAATGCCAAATATGCCTTTGCACAATTAGCTGTATGTCTGTCTTCCACCCGTCATGTTTTTCTGCGGTTTTACTGGTTTTCAATGGTGAATACGGATACAAATTACTATGTTTATCAGTTGTGTTTAAAGTACTGTACTATTTTAGAAGAAATAAGGGGAAAAAAAAACACAGGTAATAACCATTTGAATGAAAAATGGTAGTGGTAGCAAAAATTCTAGAAATTATTATTATTATTTCTTTGAAAGAGAACAATTGTTACTACATATCTCTCTCTTTTAAGATACACTTTCCTTTGCCTTTGAAATATTTTGTAAAGAACACATTTTATCCACTATAAAAGAAGATTAATGTTTCACACCTCCCTCACTCACTCACTCCATCTCTCACTCTCATCGAGTAAAAAATGAAAGAATACAAGGACTTAGAAAGAAAGACATACAAACGAAGAGTCGACAACACAAGGAGGCAAACTAAGAAAGAGCCTCCTTTCGAGTAGAATACAAGGACTTTGTTTCGTTTTCTATGCCACAGAATGTTTACAAGTTAAGATCCTCGGTGTAAAATTCGGAACATTTCTGCTAATAATTAGTCTGCTGGATGGTAGCATTGGTAGGTACTCTTAGCTTCCCTTGCTTCTGCTGACAGTATTTTCTTTCATTCAGGTAGCTCAGCCTTGGCGTTGGGTAATGAGTTTGGTATATGAAACCAACATCCTTGAGCCGCGTTCAACATGAAAATATGGAAAAGGAAAACATCATATCAAAGCACAGATAAAATTTGCCCCCTCTTTGGTACTCATTCTCTGATTTTATTCTTTTCTTCAGTCAGCAATATTTCTGGTCGGTGACCAAGAAATTTCTGCCATGTAATGATAACATTGCGACAAATTTTTGAATTTCAGACTTATTCTGTCCTAGATTTTATTTCTCATTTTGTTTTTGTTCTATCAATGGAAGAGCTTTTTCATATCTCCCCCTTTCCTTTGGAATGCGGGAGGAAATCTCATTTTCCTAATTTTAATTCTTTTTTTGGGTTCTATTCTAATTTCTTTCTCCATTGAATATATCTTACCATAAAGAAAGAAAGAAAG

mRNA sequence

GTTTTTGGCAATTTCCGATCAAATTAGTGCACACCCTCCGGCCCAACGCGCGCACATTGTTCGCAGCCACACAAAGCTCTCGCGTCTCTTGTTTCTCTCTCGAGCCGCCCGCTCACCACATCACAGCATATCTGACTGGTGGCGGCACTAAGGTTTCTGAGTAACCATGGCCGATTTCCAGACCTCGACTCAACGAGCCAAATGGATCTTGTCTCCTCAGGATCTGATTGCTTTATTAAGCAACTGGAGTTTCTTACTTCTATGGTTTACAGGTACAAAGCTGCTAACCAGAGAGCAATAGAAGCTCTGGATAAGTTTGGAGCAACACTAATGGAAGTAGATGCTGACGGATCATTGTCATATCCAGACCCTCAGATGAATTCAAAAGATAATGCTGACAAACATTCTCGCCCCAAATCGTTGAGTATTGAAGAAGAGCAATTTATGCGAGTATTTTACGAAAACAAACTTCAAGAAGTATGCAACAATTTTCATTTTCCTCATAAAATCCAGGCAACAGCTCTAATATATTTTAAAAGATTCTACCTACAATGGTCCGTGATGCAACATAATCCAAAAAATAGTTTGGAATTTGATCTTATTGTTTATGCACCTTACCGATCAGTTGAAGGCTATATAAATGATATTGAGGAACTCTTCCATGAGAATGCTGAAATGCTTCAAATGCTGAAGGAAACAGCATCATTAGAGGTTGATAAAATTATGTTAACGGATGCCCCACTTCTCTTCCCCCCTGGGCAGTTAGCATTGGCTGCATTGCGCAGATCAAATGAAGTTCATGGAGTTATTGACTTCGATAGCTACCTGGATAGTATCCTCTCTCGCCAGAATTCTGCACATACAATTTCCGAGCTCTACGAGCGTATAAATTCAATTGAATCATTGGTTAATAGATATGCCTTCCCTTCAGAAAAGGATTTAAAGCACATCAACCGAAAATTAAAATCTTGCTGGGGGCTGGGCTCCAATGACGAGAGTAAGAAAAGGGAGAAGAAATCAAAGCACAAATCAAAGAAGAGCTCAAATGAAATGCCAAATATGCCTTTGCACAATTAGCTGTAGCTCAGCCTTGGCGTTGGGTAATGAGTTTGGTATATGAAACCAACATCCTTGAGCCGCGTTCAACATGAAAATATGGAAAAGGAAAACATCATATCAAAGCACAGATAAAATTTGCCCCCTCTTTGGTACTCATTCTCTGATTTTATTCTTTTCTTCAGTCAGCAATATTTCTGGTCGGTGACCAAGAAATTTCTGCCATGTAATGATAACATTGCGACAAATTTTTGAATTTCAGACTTATTCTGTCCTAGATTTTATTTCTCATTTTGTTTTTGTTCTATCAATGGAAGAGCTTTTTCATATCTCCCCCTTTCCTTTGGAATGCGGGAGGAAATCTCATTTTCCTAATTTTAATTCTTTTTTTGGGTTCTATTCTAATTTCTTTCTCCATTGAATATATCTTACCATAAAGAAAGAAAGAAAG

Coding sequence (CDS)

ATGGATCTTGTCTCCTCAGGATCTGATTGCTTTATTAAGCAACTGGAGTTTCTTACTTCTATGGTTTACAGGTACAAAGCTGCTAACCAGAGAGCAATAGAAGCTCTGGATAAGTTTGGAGCAACACTAATGGAAGTAGATGCTGACGGATCATTGTCATATCCAGACCCTCAGATGAATTCAAAAGATAATGCTGACAAACATTCTCGCCCCAAATCGTTGAGTATTGAAGAAGAGCAATTTATGCGAGTATTTTACGAAAACAAACTTCAAGAAGTATGCAACAATTTTCATTTTCCTCATAAAATCCAGGCAACAGCTCTAATATATTTTAAAAGATTCTACCTACAATGGTCCGTGATGCAACATAATCCAAAAAATAGTTTGGAATTTGATCTTATTGTTTATGCACCTTACCGATCAGTTGAAGGCTATATAAATGATATTGAGGAACTCTTCCATGAGAATGCTGAAATGCTTCAAATGCTGAAGGAAACAGCATCATTAGAGGTTGATAAAATTATGTTAACGGATGCCCCACTTCTCTTCCCCCCTGGGCAGTTAGCATTGGCTGCATTGCGCAGATCAAATGAAGTTCATGGAGTTATTGACTTCGATAGCTACCTGGATAGTATCCTCTCTCGCCAGAATTCTGCACATACAATTTCCGAGCTCTACGAGCGTATAAATTCAATTGAATCATTGGTTAATAGATATGCCTTCCCTTCAGAAAAGGATTTAAAGCACATCAACCGAAAATTAAAATCTTGCTGGGGGCTGGGCTCCAATGACGAGAGTAAGAAAAGGGAGAAGAAATCAAAGCACAAATCAAAGAAGAGCTCAAATGAAATGCCAAATATGCCTTTGCACAATTAG

Protein sequence

MDLVSSGSDCFIKQLEFLTSMVYRYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKNSLEFDLIVYAPYRSVEGYINDIEELFHENAEMLQMLKETASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDFDSYLDSILSRQNSAHTISELYERINSIESLVNRYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSKKSSNEMPNMPLHN

Homology

[Close]

BLAST of Lsi01G010110 vs. ExPASy Swiss-Prot
Match: Q8W5S1 (Cyclin-H1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCH1-1 PE=1 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 3.0e-82
Identity = 172/309 (55.66%), Postives = 212/309 (68.61%), Query Frame = 0


Query: 24  RYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMR 83
           RYKAANQRA++ L+K G T +EVDA GSL+YP  ++ S D ADK  +P  LS +EE+FMR
Sbjct: 23  RYKAANQRAVQMLEKCGTTQVEVDASGSLTYPKDKVGSGDQADKKLKP--LSADEERFMR 82

Query: 84  VFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPK----------------- 143
            FYE K+QEVC+ F FPHKIQATAL YFKRFYLQWSVMQH+PK                 
Sbjct: 83  AFYEAKVQEVCSAFAFPHKIQATALQYFKRFYLQWSVMQHHPKEIMLTCVYAACKIEENH 142

Query: 144 -------------------------NSLEFDLIVYAPYRSVEGYINDIEELFH---ENAE 203
                                     SLEFDLIVYAPYR++EG++N++EE      +  +
Sbjct: 143 VSAEEIGKGINQDHRIILKYEMAVLQSLEFDLIVYAPYRAIEGFVNNMEEFLQARDDEIQ 202

Query: 204 MLQMLKETASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDFDSYLDSILSRQNS 263
            L+ L + A+ E DK+MLTDAPLLFPPGQLALA+LR +N V GVIDFD YL++I+S+ NS
Sbjct: 203 KLESLLKGATAEADKVMLTDAPLLFPPGQLALASLRIANGVLGVIDFDRYLENIVSQPNS 262

Query: 264 AHTISELYERINSIESLVNRYAFPSEKDLKHINRKLKSCWG-LGSNDESKKREKKSKHKS 287
            HT SEL + +++IE LV  Y  PSEKD+KHINRKLKSC G   S+DESKKREK+SKHKS
Sbjct: 263 EHTTSELTKLLDNIEYLVKNYKCPSEKDMKHINRKLKSCLGHSSSHDESKKREKRSKHKS 322

[Close]

BLAST of Lsi01G010110 vs. ExPASy Swiss-Prot
Match: Q10D80 (Cyclin-H1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCH1-1 PE=1 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 3.4e-70
Identity = 151/306 (49.35%), Postives = 200/306 (65.36%), Query Frame = 0


Query: 24  RYKAANQRAIEALDKFGATLMEVD-ADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFM 83
           R+ AANQRA E L ++G T ++VD  DGSLSYP+P   + D+    S  K LS EEE+ M
Sbjct: 23  RWGAANQRATETLVQYGTTRLKVDPVDGSLSYPEP---APDHVVGSSGVKPLSCEEERLM 82

Query: 84  RVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKN--------------- 143
           RVFYE K+QEVC+ F FPHKIQATA+IYFKRFYLQWSVM+H+PK+               
Sbjct: 83  RVFYEQKIQEVCSAFKFPHKIQATAIIYFKRFYLQWSVMEHHPKHIMLTCIYSSCKVEEN 142

Query: 144 ---------------------------SLEFDLIVYAPYRSVEGYINDIEELF---HENA 203
                                      SL+FDLIVYAPYRS+EG+++D+E+     +   
Sbjct: 143 HVSAEELGKGIQQDHQIILNNEMIVLKSLDFDLIVYAPYRSIEGFVDDMEDFCRAGNGEH 202

Query: 204 EMLQMLKETASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDFDSYLDSILSRQN 263
           + LQ L++TA  +VDK+MLTDAPLL+ PGQLALAAL +SN++H +++F+ YL+S+ SRQ+
Sbjct: 203 QRLQDLRQTAISQVDKMMLTDAPLLYTPGQLALAALHKSNDMHKILNFERYLESVFSRQH 262

Query: 264 SAHTISELYERINSIESLVNRYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKS 284
           S   I +    IN I  LV +   P+ KD++HI+RKLK C    S DE KK+EKKSKHKS
Sbjct: 263 SDCPIEQFVGSINMINYLVEQLKIPTPKDMRHIDRKLKHCLDPSSQDEHKKKEKKSKHKS 322

[Close]

BLAST of Lsi01G010110 vs. ExPASy Swiss-Prot
Match: P51946 (Cyclin-H OS=Homo sapiens OX=9606 GN=CCNH PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 7.5e-17
Identity = 80/277 (28.88%), Postives = 129/277 (46.57%), Query Frame = 0


Query: 71  PKSLSIEEEQFMRVFYENKLQEVCNNFH--FPHKIQATALIYFKRFYLQWSVMQHNPK-- 130
           P  L   EE  +  +YE +L E C+ F    P  +  TA +YFKRFYL  SVM+++P+  
Sbjct: 45  PVFLEPHEEMTLCKYYEKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRII 104

Query: 131 -----------------------------------------------NSLEFDLIVYAPY 190
                                                            L F LIV+ PY
Sbjct: 105 MLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEKALEQILEYELLLIQQLNFHLIVHNPY 164

Query: 191 RSVEGYINDIEELFH--ENAEMLQMLKETASLEVDKIMLTDAPLLFPPGQLALAALRRSN 250
           R  EG++ D++  +   EN E   +L++TA   +++I LTDA LL+ P Q+AL A+  S 
Sbjct: 165 RPFEGFLIDLKTRYPILENPE---ILRKTADDFLNRIALTDAYLLYTPSQIALTAILSSA 224

Query: 251 EVHGVIDFDSYLDSILSRQNSAHTISELYERINSIESLVNRYAFPSEKDLKHINRKLKSC 284
              G I  +SYL   L  + +   +S+L + + S+ +LV +Y  P  +++  + +KL+ C
Sbjct: 225 SRAG-ITMESYLSESLMLKENRTCLSQLLDIMKSMRNLVKKYEPPRSEEVAVLKQKLERC 284

[Close]

BLAST of Lsi01G010110 vs. ExPASy Swiss-Prot
Match: Q4R7U4 (Cyclin-H OS=Macaca fascicularis OX=9541 GN=CCNH PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 7.5e-17
Identity = 80/277 (28.88%), Postives = 129/277 (46.57%), Query Frame = 0


Query: 71  PKSLSIEEEQFMRVFYENKLQEVCNNFH--FPHKIQATALIYFKRFYLQWSVMQHNPK-- 130
           P  L   EE  +  +YE +L E C+ F    P  +  TA +YFKRFYL  SVM+++P+  
Sbjct: 45  PVFLEPHEEMTLCKYYEKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRII 104

Query: 131 -----------------------------------------------NSLEFDLIVYAPY 190
                                                            L F LIV+ PY
Sbjct: 105 MLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEKALEQILEYELLLIQQLNFHLIVHNPY 164

Query: 191 RSVEGYINDIEELFH--ENAEMLQMLKETASLEVDKIMLTDAPLLFPPGQLALAALRRSN 250
           R  EG++ D++  +   EN E   +L++TA   +++I LTDA LL+ P Q+AL A+  S 
Sbjct: 165 RPFEGFLIDLKTRYPILENPE---ILRKTADDFLNRIALTDAYLLYTPSQIALTAILSSA 224

Query: 251 EVHGVIDFDSYLDSILSRQNSAHTISELYERINSIESLVNRYAFPSEKDLKHINRKLKSC 284
              G I  +SYL   L  + +   +S+L + + S+ +LV +Y  P  +++  + +KL+ C
Sbjct: 225 SRAG-ITMESYLSESLMLRENRTCLSQLLDIMKSMRNLVKKYEPPRSEEVAVLKQKLERC 284

[Close]

BLAST of Lsi01G010110 vs. ExPASy Swiss-Prot
Match: Q3ZBL9 (Cyclin-H OS=Bos taurus OX=9913 GN=CCNH PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 9.8e-17
Identity = 79/270 (29.26%), Postives = 127/270 (47.04%), Query Frame = 0


Query: 71  PKSLSIEEEQFMRVFYENKLQEVCNNFH--FPHKIQATALIYFKRFYLQWSVMQHNPK-- 130
           P  L   EE  +  +YE +L E C+ F    P  +  TA +YFKRFYL  SVM+++P+  
Sbjct: 45  PVFLEPHEEITLCKYYEKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRII 104

Query: 131 -----------------------------------------------NSLEFDLIVYAPY 190
                                                            L F LIV+ PY
Sbjct: 105 MLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEKTLEQILEYELLLIQQLNFHLIVHNPY 164

Query: 191 RSVEGYINDIEELFH--ENAEMLQMLKETASLEVDKIMLTDAPLLFPPGQLALAALRRSN 250
           R  EG++ D++  +   EN E   +L++TA   ++++ LTDA LL+ P Q+AL A+  S 
Sbjct: 165 RPFEGFLIDLKTRYPLLENPE---ILRKTADDFLNRVALTDAHLLYTPSQIALTAILSSA 224

Query: 251 EVHGVIDFDSYLDSILSRQNSAHTISELYERINSIESLVNRYAFPSEKDLKHINRKLKSC 284
              G I  +SYL   L  + +  ++S+L + + S+ +LV +Y  P  +++  + +KL+ C
Sbjct: 225 SRAG-ITMESYLSESLMLKENRTSLSQLLDIMKSMRNLVKKYEPPRPEEVAALKQKLERC 284

[Close]

BLAST of Lsi01G010110 vs. ExPASy TrEMBL
Match: A0A5D3CP29 (Cyclin-H1-1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005130 PE=3 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 3.9e-133
Identity = 254/310 (81.94%), Postives = 262/310 (84.52%), Query Frame = 0


Query: 24  RYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMR 83
           RYKAANQRAIEAL+KFGA+LMEVDADGSLSYPDPQ+N KD+ADKHSRPKSLSIEEEQFMR
Sbjct: 23  RYKAANQRAIEALEKFGASLMEVDADGSLSYPDPQINLKDHADKHSRPKSLSIEEEQFMR 82

Query: 84  VFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKN---------------- 143
           VFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKN                
Sbjct: 83  VFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKNVMLTCIYAACKIEENH 142

Query: 144 --------------------------SLEFDLIVYAPYRSVEGYINDIEELFHENAEMLQ 203
                                     SLEFDLIVYAPYRSVEGY+NDIEELFHENAEMLQ
Sbjct: 143 VSAEELGKGISQDHQIILNYEMIVYQSLEFDLIVYAPYRSVEGYVNDIEELFHENAEMLQ 202

Query: 204 MLKETASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDFDSYLDSILSRQNSAHT 263
           MLK TASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDF+SYLDSILSRQNS HT
Sbjct: 203 MLKATASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDFNSYLDSILSRQNSTHT 262

Query: 264 ISELYERINSIESLVNRYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSKKSS 292
           ISELYE IN+IESLVNRYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSK+SS
Sbjct: 263 ISELYEGINAIESLVNRYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSKRSS 322

[Close]

BLAST of Lsi01G010110 vs. ExPASy TrEMBL
Match: A0A1S3B075 (cyclin-H1-1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484743 PE=3 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 8.6e-133
Identity = 253/310 (81.61%), Postives = 262/310 (84.52%), Query Frame = 0


Query: 24  RYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMR 83
           RYKAANQRAIEAL+KFGA+LMEVDADGSLSYPDPQ+N KD+ADKHSRPKSLSIEEEQFMR
Sbjct: 23  RYKAANQRAIEALEKFGASLMEVDADGSLSYPDPQINLKDHADKHSRPKSLSIEEEQFMR 82

Query: 84  VFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKN---------------- 143
           VFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKN                
Sbjct: 83  VFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKNVMLTCIYAACKIEENH 142

Query: 144 --------------------------SLEFDLIVYAPYRSVEGYINDIEELFHENAEMLQ 203
                                     SLEFDLIVYAPYRSVEGY+NDIEELFHENAEMLQ
Sbjct: 143 VSAEELGKGISQDHQIILNYEMIVYQSLEFDLIVYAPYRSVEGYVNDIEELFHENAEMLQ 202

Query: 204 MLKETASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDFDSYLDSILSRQNSAHT 263
           MLK TASL+VDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDF+SYLDSILSRQNS HT
Sbjct: 203 MLKATASLDVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDFNSYLDSILSRQNSTHT 262

Query: 264 ISELYERINSIESLVNRYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSKKSS 292
           ISELYE IN+IESLVNRYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSK+SS
Sbjct: 263 ISELYEGINAIESLVNRYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSKRSS 322

[Close]

BLAST of Lsi01G010110 vs. ExPASy TrEMBL
Match: A0A0A0KJE5 (CYCLIN domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G490020 PE=3 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 2.8e-131
Identity = 252/310 (81.29%), Postives = 260/310 (83.87%), Query Frame = 0


Query: 24  RYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMR 83
           RY AANQRAIEAL+KFGA LMEVDADGSLSYPDPQ+NSKD+ADKHSRPKSLSIEEEQFMR
Sbjct: 23  RYNAANQRAIEALEKFGAALMEVDADGSLSYPDPQINSKDHADKHSRPKSLSIEEEQFMR 82

Query: 84  VFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKN---------------- 143
           VFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKN                
Sbjct: 83  VFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKNVMLTCIYAACKIEENH 142

Query: 144 --------------------------SLEFDLIVYAPYRSVEGYINDIEELFHENAEMLQ 203
                                     SLEFDLIVYAPYRSVEGY+NDIEELF+ENAEMLQ
Sbjct: 143 VSAEELGKGISQDHQIILNYEMIVYQSLEFDLIVYAPYRSVEGYVNDIEELFNENAEMLQ 202

Query: 204 MLKETASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDFDSYLDSILSRQNSAHT 263
           MLK TASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDF+SYLDSILSRQNS HT
Sbjct: 203 MLKVTASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDFNSYLDSILSRQNSTHT 262

Query: 264 ISELYERINSIESLVNRYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSKKSS 292
           ISELYE IN+IESLVNRYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSK+SS
Sbjct: 263 ISELYEGINAIESLVNRYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSKRSS 322

[Close]

BLAST of Lsi01G010110 vs. ExPASy TrEMBL
Match: A0A6J1KS71 (cyclin-H1-1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497153 PE=3 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 5.8e-129
Identity = 246/312 (78.85%), Postives = 258/312 (82.69%), Query Frame = 0


Query: 21  MVYRYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQ 80
           +V RYKAANQRAIEAL+KFGATLM VDADGSLSYPDP +NSK+NADKHSRPK LSIEEEQ
Sbjct: 20  LVGRYKAANQRAIEALEKFGATLMVVDADGSLSYPDPLINSKENADKHSRPKPLSIEEEQ 79

Query: 81  FMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKN------------- 140
           FMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKN             
Sbjct: 80  FMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKNVMLTCIYAACKIE 139

Query: 141 -----------------------------SLEFDLIVYAPYRSVEGYINDIEELFHENAE 200
                                        SLEFDLIVYAPYRSVEGY++D+EE+FHENAE
Sbjct: 140 ENHVSAEELGKGISQDHQIILNYEMIVYQSLEFDLIVYAPYRSVEGYVHDMEEVFHENAE 199

Query: 201 MLQMLKETASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDFDSYLDSILSRQNS 260
            LQMLKE ASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDF+ YLDSILSRQNS
Sbjct: 200 RLQMLKEAASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDFERYLDSILSRQNS 259

Query: 261 AHTISELYERINSIESLVNRYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSK 291
           AH ISELYER NSI+S +N+YAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSK
Sbjct: 260 AHIISELYERFNSIDSWINKYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSK 319

[Close]

BLAST of Lsi01G010110 vs. ExPASy TrEMBL
Match: A0A6J1HF25 (cyclin-H1-1 OS=Cucurbita moschata OX=3662 GN=LOC111463583 PE=3 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 1.7e-128
Identity = 245/312 (78.53%), Postives = 258/312 (82.69%), Query Frame = 0


Query: 21  MVYRYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQ 80
           +V RYKAANQRAIEAL+KFGATLM VDADGSLSYPDP +NSK+NADKHSRPK LSIEEEQ
Sbjct: 20  LVGRYKAANQRAIEALEKFGATLMVVDADGSLSYPDPLINSKENADKHSRPKPLSIEEEQ 79

Query: 81  FMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKN------------- 140
           FMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKN             
Sbjct: 80  FMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKNVMLTCIYAACKIE 139

Query: 141 -----------------------------SLEFDLIVYAPYRSVEGYINDIEELFHENAE 200
                                        SLEFDLIVYAPYRSVEGY++D+EE+FHENAE
Sbjct: 140 ENHVSAEELGKGISQDHQIILNYEMIVYQSLEFDLIVYAPYRSVEGYVHDMEEVFHENAE 199

Query: 201 MLQMLKETASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDFDSYLDSILSRQNS 260
            LQMLKETASLEVDKIMLTD PLLFPPGQLALAALRRSNEVHGVIDF+ YLDSILSRQNS
Sbjct: 200 RLQMLKETASLEVDKIMLTDGPLLFPPGQLALAALRRSNEVHGVIDFERYLDSILSRQNS 259

Query: 261 AHTISELYERINSIESLVNRYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSK 291
           AH ISELYER +SI+S +N+YAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSK
Sbjct: 260 AHIISELYERFSSIDSWINKYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSK 319

[Close]

BLAST of Lsi01G010110 vs. NCBI nr
Match: XP_038883649.1 (cyclin-H1-1 isoform X1 [Benincasa hispida])

HSP 1 Score: 495.0 bits (1273), Expect = 4.5e-136
Identity = 260/313 (83.07%), Postives = 267/313 (85.30%), Query Frame = 0


Query: 21  MVYRYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQ 80
           +V RYKAANQRAIEAL+KFGATLMEVDADGSLSYP+PQ+NSKDNADKHSRPKSLSIEE+Q
Sbjct: 20  LVCRYKAANQRAIEALEKFGATLMEVDADGSLSYPEPQINSKDNADKHSRPKSLSIEEDQ 79

Query: 81  FMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKN------------- 140
           FMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKN             
Sbjct: 80  FMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKNVMLTCIYAACKIE 139

Query: 141 -----------------------------SLEFDLIVYAPYRSVEGYINDIEELFHENAE 200
                                        SLEFDLIVYAPYRSVEGY+NDIEELFHENAE
Sbjct: 140 ENHVSAEELGKGISQDHQIILNYEMIVYQSLEFDLIVYAPYRSVEGYVNDIEELFHENAE 199

Query: 201 MLQMLKETASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDFDSYLDSILSRQNS 260
           MLQMLK TASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDF+SYLDSILSRQNS
Sbjct: 200 MLQMLKVTASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDFESYLDSILSRQNS 259

Query: 261 AHTISELYERINSIESLVNRYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSK 292
           AHTISELYERINSIESLVNRYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSK
Sbjct: 260 AHTISELYERINSIESLVNRYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSK 319

[Close]

BLAST of Lsi01G010110 vs. NCBI nr
Match: TYK12918.1 (cyclin-H1-1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 484.2 bits (1245), Expect = 8.0e-133
Identity = 254/310 (81.94%), Postives = 262/310 (84.52%), Query Frame = 0


Query: 24  RYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMR 83
           RYKAANQRAIEAL+KFGA+LMEVDADGSLSYPDPQ+N KD+ADKHSRPKSLSIEEEQFMR
Sbjct: 23  RYKAANQRAIEALEKFGASLMEVDADGSLSYPDPQINLKDHADKHSRPKSLSIEEEQFMR 82

Query: 84  VFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKN---------------- 143
           VFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKN                
Sbjct: 83  VFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKNVMLTCIYAACKIEENH 142

Query: 144 --------------------------SLEFDLIVYAPYRSVEGYINDIEELFHENAEMLQ 203
                                     SLEFDLIVYAPYRSVEGY+NDIEELFHENAEMLQ
Sbjct: 143 VSAEELGKGISQDHQIILNYEMIVYQSLEFDLIVYAPYRSVEGYVNDIEELFHENAEMLQ 202

Query: 204 MLKETASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDFDSYLDSILSRQNSAHT 263
           MLK TASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDF+SYLDSILSRQNS HT
Sbjct: 203 MLKATASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDFNSYLDSILSRQNSTHT 262

Query: 264 ISELYERINSIESLVNRYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSKKSS 292
           ISELYE IN+IESLVNRYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSK+SS
Sbjct: 263 ISELYEGINAIESLVNRYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSKRSS 322

[Close]

BLAST of Lsi01G010110 vs. NCBI nr
Match: XP_008440225.1 (PREDICTED: cyclin-H1-1 isoform X1 [Cucumis melo] >XP_008440226.1 PREDICTED: cyclin-H1-1 isoform X1 [Cucumis melo])

HSP 1 Score: 483.0 bits (1242), Expect = 1.8e-132
Identity = 253/310 (81.61%), Postives = 262/310 (84.52%), Query Frame = 0


Query: 24  RYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMR 83
           RYKAANQRAIEAL+KFGA+LMEVDADGSLSYPDPQ+N KD+ADKHSRPKSLSIEEEQFMR
Sbjct: 23  RYKAANQRAIEALEKFGASLMEVDADGSLSYPDPQINLKDHADKHSRPKSLSIEEEQFMR 82

Query: 84  VFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKN---------------- 143
           VFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKN                
Sbjct: 83  VFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKNVMLTCIYAACKIEENH 142

Query: 144 --------------------------SLEFDLIVYAPYRSVEGYINDIEELFHENAEMLQ 203
                                     SLEFDLIVYAPYRSVEGY+NDIEELFHENAEMLQ
Sbjct: 143 VSAEELGKGISQDHQIILNYEMIVYQSLEFDLIVYAPYRSVEGYVNDIEELFHENAEMLQ 202

Query: 204 MLKETASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDFDSYLDSILSRQNSAHT 263
           MLK TASL+VDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDF+SYLDSILSRQNS HT
Sbjct: 203 MLKATASLDVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDFNSYLDSILSRQNSTHT 262

Query: 264 ISELYERINSIESLVNRYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSKKSS 292
           ISELYE IN+IESLVNRYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSK+SS
Sbjct: 263 ISELYEGINAIESLVNRYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSKRSS 322

[Close]

BLAST of Lsi01G010110 vs. NCBI nr
Match: XP_004141934.1 (cyclin-H1-1 isoform X1 [Cucumis sativus] >KGN48487.1 hypothetical protein Csa_003417 [Cucumis sativus])

HSP 1 Score: 478.0 bits (1229), Expect = 5.7e-131
Identity = 252/310 (81.29%), Postives = 260/310 (83.87%), Query Frame = 0


Query: 24  RYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMR 83
           RY AANQRAIEAL+KFGA LMEVDADGSLSYPDPQ+NSKD+ADKHSRPKSLSIEEEQFMR
Sbjct: 23  RYNAANQRAIEALEKFGAALMEVDADGSLSYPDPQINSKDHADKHSRPKSLSIEEEQFMR 82

Query: 84  VFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKN---------------- 143
           VFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKN                
Sbjct: 83  VFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKNVMLTCIYAACKIEENH 142

Query: 144 --------------------------SLEFDLIVYAPYRSVEGYINDIEELFHENAEMLQ 203
                                     SLEFDLIVYAPYRSVEGY+NDIEELF+ENAEMLQ
Sbjct: 143 VSAEELGKGISQDHQIILNYEMIVYQSLEFDLIVYAPYRSVEGYVNDIEELFNENAEMLQ 202

Query: 204 MLKETASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDFDSYLDSILSRQNSAHT 263
           MLK TASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDF+SYLDSILSRQNS HT
Sbjct: 203 MLKVTASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDFNSYLDSILSRQNSTHT 262

Query: 264 ISELYERINSIESLVNRYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSKKSS 292
           ISELYE IN+IESLVNRYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSK+SS
Sbjct: 263 ISELYEGINAIESLVNRYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSKRSS 322

[Close]

BLAST of Lsi01G010110 vs. NCBI nr
Match: XP_023518875.1 (cyclin-H1-1 [Cucurbita pepo subsp. pepo] >XP_023518876.1 cyclin-H1-1 [Cucurbita pepo subsp. pepo] >XP_023518878.1 cyclin-H1-1 [Cucurbita pepo subsp. pepo] >XP_023518879.1 cyclin-H1-1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 472.2 bits (1214), Expect = 3.1e-129
Identity = 247/312 (79.17%), Postives = 259/312 (83.01%), Query Frame = 0


Query: 21  MVYRYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQ 80
           +V RYKAANQRAIEAL+KFGATLM VDADGSLSYPDP +NSK+NADKHSRPK LSIEEEQ
Sbjct: 20  LVGRYKAANQRAIEALEKFGATLMVVDADGSLSYPDPLINSKENADKHSRPKPLSIEEEQ 79

Query: 81  FMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKN------------- 140
           FMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKN             
Sbjct: 80  FMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKNVMLTCIYAACKIE 139

Query: 141 -----------------------------SLEFDLIVYAPYRSVEGYINDIEELFHENAE 200
                                        SLEFDLIVYAPYRSVEGY++D+EE+FHENAE
Sbjct: 140 ENHVSAEELGKGISQDHQIILNYEMIVYQSLEFDLIVYAPYRSVEGYVHDMEEVFHENAE 199

Query: 201 MLQMLKETASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDFDSYLDSILSRQNS 260
            LQMLKETASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDF+ YLDSILSRQNS
Sbjct: 200 RLQMLKETASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDFERYLDSILSRQNS 259

Query: 261 AHTISELYERINSIESLVNRYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSK 291
           AH ISELYER NSI+S +N+YAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSK
Sbjct: 260 AHIISELYERFNSIDSWINKYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSK 319

[Close]

BLAST of Lsi01G010110 vs. TAIR 10
Match: AT5G27620.1 (cyclin H;1 )

HSP 1 Score: 306.6 bits (784), Expect = 2.1e-83
Identity = 172/309 (55.66%), Postives = 212/309 (68.61%), Query Frame = 0


Query: 24  RYKAANQRAIEALDKFGATLMEVDADGSLSYPDPQMNSKDNADKHSRPKSLSIEEEQFMR 83
           RYKAANQRA++ L+K G T +EVDA GSL+YP  ++ S D ADK  +P  LS +EE+FMR
Sbjct: 23  RYKAANQRAVQMLEKCGTTQVEVDASGSLTYPKDKVGSGDQADKKLKP--LSADEERFMR 82

Query: 84  VFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPK----------------- 143
            FYE K+QEVC+ F FPHKIQATAL YFKRFYLQWSVMQH+PK                 
Sbjct: 83  AFYEAKVQEVCSAFAFPHKIQATALQYFKRFYLQWSVMQHHPKEIMLTCVYAACKIEENH 142

Query: 144 -------------------------NSLEFDLIVYAPYRSVEGYINDIEELFH---ENAE 203
                                     SLEFDLIVYAPYR++EG++N++EE      +  +
Sbjct: 143 VSAEEIGKGINQDHRIILKYEMAVLQSLEFDLIVYAPYRAIEGFVNNMEEFLQARDDEIQ 202

Query: 204 MLQMLKETASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDFDSYLDSILSRQNS 263
            L+ L + A+ E DK+MLTDAPLLFPPGQLALA+LR +N V GVIDFD YL++I+S+ NS
Sbjct: 203 KLESLLKGATAEADKVMLTDAPLLFPPGQLALASLRIANGVLGVIDFDRYLENIVSQPNS 262

Query: 264 AHTISELYERINSIESLVNRYAFPSEKDLKHINRKLKSCWG-LGSNDESKKREKKSKHKS 287
            HT SEL + +++IE LV  Y  PSEKD+KHINRKLKSC G   S+DESKKREK+SKHKS
Sbjct: 263 EHTTSELTKLLDNIEYLVKNYKCPSEKDMKHINRKLKSCLGHSSSHDESKKREKRSKHKS 322

The following BLAST results are available for this feature:

BLAST of Lsi01G010110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W5S1	3.0e-82	55.66	Cyclin-H1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCH1-1 PE=1 SV=1	[more]
Q10D80	3.4e-70	49.35	Cyclin-H1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCH1-1 PE=1 SV=1	[more]
P51946	7.5e-17	28.88	Cyclin-H OS=Homo sapiens OX=9606 GN=CCNH PE=1 SV=1	[more]
Q4R7U4	7.5e-17	28.88	Cyclin-H OS=Macaca fascicularis OX=9541 GN=CCNH PE=2 SV=1	[more]
Q3ZBL9	9.8e-17	29.26	Cyclin-H OS=Bos taurus OX=9913 GN=CCNH PE=2 SV=1	[more]

BLAST of Lsi01G010110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CP29	3.9e-133	81.94	Cyclin-H1-1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]
A0A1S3B075	8.6e-133	81.61	cyclin-H1-1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484743 PE=3 SV=1	[more]
A0A0A0KJE5	2.8e-131	81.29	CYCLIN domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G490020 PE=3...	[more]
A0A6J1KS71	5.8e-129	78.85	cyclin-H1-1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497153 PE=3 SV=1	[more]
A0A6J1HF25	1.7e-128	78.53	cyclin-H1-1 OS=Cucurbita moschata OX=3662 GN=LOC111463583 PE=3 SV=1	[more]

BLAST of Lsi01G010110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883649.1	4.5e-136	83.07	cyclin-H1-1 isoform X1 [Benincasa hispida]	[more]
TYK12918.1	8.0e-133	81.94	cyclin-H1-1 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_008440225.1	1.8e-132	81.61	PREDICTED: cyclin-H1-1 isoform X1 [Cucumis melo] >XP_008440226.1 PREDICTED: cycl...	[more]
XP_004141934.1	5.7e-131	81.29	cyclin-H1-1 isoform X1 [Cucumis sativus] >KGN48487.1 hypothetical protein Csa_00...	[more]
XP_023518875.1	3.1e-129	79.17	cyclin-H1-1 [Cucurbita pepo subsp. pepo] >XP_023518876.1 cyclin-H1-1 [Cucurbita ...	[more]

BLAST of Lsi01G010110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G27620.1	2.1e-83	55.66	cyclin H;1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR031658	Cyclin, C-terminal domain 2	PFAM	PF16899	Cyclin_C_2	coord: 138..236 e-value: 1.9E-11 score: 44.3
None	No IPR available	GENE3D	1.10.472.10		coord: 45..128 e-value: 9.3E-16 score: 59.9
None	No IPR available	GENE3D	1.10.472.10		coord: 136..238 e-value: 1.3E-27 score: 97.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 259..291
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..72
None	No IPR available	PANTHER	PTHR10026:SF8	CYCLIN-H	coord: 23..127
None	No IPR available	PANTHER	PTHR10026:SF8	CYCLIN-H	coord: 128..284
IPR043198	Cyclin/Cyclin-like subunit Ssn8	PANTHER	PTHR10026	CYCLIN	coord: 23..127
IPR043198	Cyclin/Cyclin-like subunit Ssn8	PANTHER	PTHR10026	CYCLIN	coord: 128..284
IPR013763	Cyclin-like	CDD	cd00043	CYCLIN	coord: 82..126 e-value: 4.70628E-6 score: 42.2257
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 68..126
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 138..259

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G010110.1	Lsi01G010110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division
biological_process	GO:0070816	phosphorylation of RNA polymerase II C-terminal domain
biological_process	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0070985	transcription factor TFIIK complex
molecular_function	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity