Lsi01G010010 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi01G010010
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	RPW8 domain-containing protein
Location	chr01: 8272140 .. 8272748 (-)
RNA-Seq Expression	Lsi01G010010
Synteny	Lsi01G010010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGGGCGGAATTGGTAGCCGGGGCGGCTTTGGGTGCTTTATTAGGAGAGTTACTGAAACGGGTGATTAATTTGATGGAAAAGGCCATTAATTTCAAACCTGTGCTTGCAGAAATCAAAAGCCAGGTAGAGTTTTTAATGCCATTGATGAAGCAGGTGGATGAGCTTGGTGAGGATTTCCAGCTGGAATATTCTAACACTTTGAAGGAAGTCGTACATCAAGGGAAGCAACTGATTATGGAGTGCGATGCTGCCAAACAACGTTTTCTCAAATATCATAAGTTCCCATCTTACACCAAAAGGCTTCGCAAATTGGATGCTCAACTTGAAAGGGCCTCACTCAATTTATTGTTGCAATTGAGTGTACAACACATGAAGAAATTACAAACTTTGGAAATCAATAATAATCGACATGGTCGACCTCGGTTATTGGCATCTAAGATCGTCGATAAAGGCAAGATCGTCATCAAGAAAATATTTATGGGCGAGAGTAGTATTAATAATAATGATTGTAGTTGTGGTCTCCACGGTTACGTTCCAAATTACCCAACAACCAAGCTGCCCTTACTGTTTTACCACGACAAGCGACTCAAAGGTAAACAATAA

mRNA sequence

ATGGAGGGGGCGGAATTGGTAGCCGGGGCGGCTTTGGGTGCTTTATTAGGAGAGTTACTGAAACGGGTGATTAATTTGATGGAAAAGGCCATTAATTTCAAACCTGTGCTTGCAGAAATCAAAAGCCAGGTAGAGTTTTTAATGCCATTGATGAAGCAGGTGGATGAGCTTGGTGAGGATTTCCAGCTGGAATATTCTAACACTTTGAAGGAAGTCGTACATCAAGGGAAGCAACTGATTATGGAGTGCGATGCTGCCAAACAACGTTTTCTCAAATATCATAAGTTCCCATCTTACACCAAAAGGCTTCGCAAATTGGATGCTCAACTTGAAAGGGCCTCACTCAATTTATTGTTGCAATTGAGTGTACAACACATGAAGAAATTACAAACTTTGGAAATCAATAATAATCGACATGGTCGACCTCGGTTATTGGCATCTAAGATCGTCGATAAAGGCAAGATCGTCATCAAGAAAATATTTATGGGCGAGAGTAGTATTAATAATAATGATTGTAGTTGTGGTCTCCACGGTTACGTTCCAAATTACCCAACAACCAAGCTGCCCTTACTGTTTTACCACGACAAGCGACTCAAAGGTAAACAATAA

Coding sequence (CDS)

ATGGAGGGGGCGGAATTGGTAGCCGGGGCGGCTTTGGGTGCTTTATTAGGAGAGTTACTGAAACGGGTGATTAATTTGATGGAAAAGGCCATTAATTTCAAACCTGTGCTTGCAGAAATCAAAAGCCAGGTAGAGTTTTTAATGCCATTGATGAAGCAGGTGGATGAGCTTGGTGAGGATTTCCAGCTGGAATATTCTAACACTTTGAAGGAAGTCGTACATCAAGGGAAGCAACTGATTATGGAGTGCGATGCTGCCAAACAACGTTTTCTCAAATATCATAAGTTCCCATCTTACACCAAAAGGCTTCGCAAATTGGATGCTCAACTTGAAAGGGCCTCACTCAATTTATTGTTGCAATTGAGTGTACAACACATGAAGAAATTACAAACTTTGGAAATCAATAATAATCGACATGGTCGACCTCGGTTATTGGCATCTAAGATCGTCGATAAAGGCAAGATCGTCATCAAGAAAATATTTATGGGCGAGAGTAGTATTAATAATAATGATTGTAGTTGTGGTCTCCACGGTTACGTTCCAAATTACCCAACAACCAAGCTGCCCTTACTGTTTTACCACGACAAGCGACTCAAAGGTAAACAATAA

Protein sequence

MEGAELVAGAALGALLGELLKRVINLMEKAINFKPVLAEIKSQVEFLMPLMKQVDELGEDFQLEYSNTLKEVVHQGKQLIMECDAAKQRFLKYHKFPSYTKRLRKLDAQLERASLNLLLQLSVQHMKKLQTLEINNNRHGRPRLLASKIVDKGKIVIKKIFMGESSINNNDCSCGLHGYVPNYPTTKLPLLFYHDKRLKGKQ

Homology

[Close]

BLAST of Lsi01G010010 vs. ExPASy Swiss-Prot
Match: Q84WJ0 (Protein DA1-related 5 OS=Arabidopsis thaliana OX=3702 GN=DAR5 PE=2 SV=2)

HSP 1 Score: 46.2 bits (108), Expect = 5.1e-04
Identity = 37/129 (28.68%), Postives = 69/129 (53.49%), Query Frame = 0


Query: 4   AELVAGAALGALLGELLKRVINLMEKAINFKPVLAEIKSQVEFLMPLMKQVD--ELGEDF 63
           A LV GAALGA L E+ K VI   +K  +FKP+  ++ S +E L+P+  ++D  + G + 
Sbjct: 7   ASLVGGAALGAPLSEIFKLVIEEAKKVKDFKPLSQDLASTMERLVPIFNEIDMMQQGSNR 66

Query: 64  QLEYSNTLKEVVHQGKQLIMECDAAKQRFLKYHKFPSYTKRLRKLDAQLERASLNLLLQL 123
                  L E + +  +++ +C  ++ ++    K   YT+ ++ ++    +    + LQL
Sbjct: 67  GTSELKVLTETMERAGEMVHKC--SRIQWYSIAKKALYTREIKAINQDFLK-FCQIELQL 126

Query: 124 SVQHMKKLQ 131
            +QH  +LQ
Sbjct: 127 -IQHRNQLQ 131

[Close]

BLAST of Lsi01G010010 vs. ExPASy TrEMBL
Match: A0A1S3B0M1 (uncharacterized protein LOC103484755 OS=Cucumis melo OX=3656 GN=LOC103484755 PE=3 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 3.6e-45
Identity = 116/210 (55.24%), Postives = 143/210 (68.10%), Query Frame = 0


Query: 1   MEGAELVAGAALGALLGELLKRVINLMEKAINFKPVLAEIKSQVEFLMPLMKQVDELGED 60
           M G EL+ GAALGALLGELLKRV+NLMEK ++FKP L  +KSQVEFLMPLM QVDELGED
Sbjct: 1   MVGEELLVGAALGALLGELLKRVLNLMEKTVHFKPELEGLKSQVEFLMPLMDQVDELGED 60

Query: 61  FQLEYSN---TLKEVVHQGKQLIMECD--AAKQRFLKYHKFPSYTKRLRKLDAQLERASL 120
           F+L YS+    LK ++++GKQLI EC+  A +    +Y K P YTK+LR+LDA+L+RA  
Sbjct: 61  FKLRYSDQTLKLKILINKGKQLIEECNYVAIQSTLSRYSKIPRYTKKLRRLDAELKRAES 120

Query: 121 NLLLQLSVQHMKKLQTLEINNNRHGRPRLLASKIVDKGKI----VIKKIFMGESSINNND 180
           NL L+L VQ M KLQ LE N N  GR      +I D+ K+    ++  +F GES INNN+
Sbjct: 121 NLRLELCVQQM-KLQALENNYNNGGR----RGRIRDRAKLFVTNILDNLFRGESGINNNE 180

Query: 181 CSCGLHGYVPNYPTTKLPLLFYHDKRLKGK 202
                          KLPLLFYHD+RLKGK
Sbjct: 181 YK------------IKLPLLFYHDRRLKGK 193

[Close]

BLAST of Lsi01G010010 vs. ExPASy TrEMBL
Match: A0A0A0KFQ5 (RPW8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G490150 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 4.9e-42
Identity = 116/219 (52.97%), Postives = 143/219 (65.30%), Query Frame = 0


Query: 5   ELVAGAALGALLGELLKRVINLMEKAINFKPVLAEIKSQVEFLMPLMKQVDELGEDFQLE 64
           EL+ GAALGALLGELLK V+NLMEK+++FKP L  +KSQ+EFL PL+ QVDELGEDF+L 
Sbjct: 5   ELLVGAALGALLGELLKGVMNLMEKSVHFKPELELLKSQIEFLQPLVDQVDELGEDFKLR 64

Query: 65  YSN-TLKEVVHQGKQLIMEC-DAAKQRFL-KYHKFP-SYTKRLRKLDAQLERASLNLLLQ 124
           YS+ TLK ++ +GKQLI EC DAA Q  L +Y K    YTK LR+LDA+L+RA  NL L+
Sbjct: 65  YSDQTLKILIRKGKQLIRECNDAAIQNTLSRYFKIQLCYTKDLRRLDAELKRAGSNLRLE 124

Query: 125 LSVQHMKKLQTLEINNNRHGRPRLLASKIVDKGKIVI------------------KKIFM 184
           L VQ MKKLQ LEIN N  GR      +I+D+ K+++                   K+F 
Sbjct: 125 LYVQQMKKLQALEINYNNDGR----YGRILDRAKLIVTSILTHVGYNFTFVTNILDKLFS 184

Query: 185 GESSINNNDCSCGLHGYVPNYPTTKLPLLFYHDKRLKGK 202
           GES  NNN  +             KLPLLFYHD+RLKGK
Sbjct: 185 GESGSNNNKYN------------IKLPLLFYHDQRLKGK 207

[Close]

BLAST of Lsi01G010010 vs. ExPASy TrEMBL
Match: A0A1S3B199 (uncharacterized protein LOC103484756 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484756 PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 1.4e-33
Identity = 98/202 (48.51%), Postives = 126/202 (62.38%), Query Frame = 0


Query: 5   ELVAGAALGALLGELLKRVINLMEKAINFKPVLAEIKSQVEFLMPLMKQVDELGEDFQLE 64
           +L+ GAA+GALL +LL  V+ L+EKA++FKP L  +KSQV FLM LM QVDELGEDF+L 
Sbjct: 5   DLLGGAAVGALLAQLLNEVMKLIEKAVHFKPELEGLKSQVGFLMRLMDQVDELGEDFKLR 64

Query: 65  YSN---TLKEVVHQGKQLIMECD--AAKQRFLKYHKFPSYTKRLRKLDAQLERASLNLLL 124
           Y +    LK ++++GKQLI EC+  A +    +Y K P YTK+LRKLDA+L+ A  NL+L
Sbjct: 65  YFDQTLKLKILINKGKQLIEECNDVAIQSTLSRYSKIPRYTKKLRKLDAELKSAQSNLML 124

Query: 125 QLSVQHMKKLQTLEINNNRHGRPRLLASKIVDKGKIVIKKIFMGESSINNNDCSCGLHGY 184
            LSVQ   +L  LE N N +GR ++L            K+ F  E    NN+        
Sbjct: 125 ALSVQ---QLLALERNYNNNGRTQILD-----------KRPFRSEGGSTNNEYK------ 180

Query: 185 VPNYPTTKLPLLFYHDKRLKGK 202
                  KLPLLFYHDKRLKGK
Sbjct: 185 ------IKLPLLFYHDKRLKGK 180

[Close]

BLAST of Lsi01G010010 vs. ExPASy TrEMBL
Match: A0A6J1IPW2 (uncharacterized protein LOC111478854 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478854 PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 2.7e-32
Identity = 88/198 (44.44%), Postives = 124/198 (62.63%), Query Frame = 0


Query: 6   LVAGAALGALLGELLKRVINLMEKAINFKPVLAEIKSQVEFLMPLMKQVDELGEDFQLEY 65
           LV GA LGAL GELLK ++NL EK+I+FKPVL +I++ +EFL  +++Q+D+    F    
Sbjct: 5   LVNGAVLGALFGELLKGILNLAEKSIHFKPVLEDIRAHLEFLSLVIQQLDDEHSGFLASP 64

Query: 66  SNT--LKEVVHQGKQLIMECDAAKQRFLKYHKFPSYTKRLRKLDAQLERASLNLLLQLSV 125
            NT  L+ V+  GK+LI +C+   Q  L +HK P YTK+LR+L+A+  RAS NLLLQ++V
Sbjct: 65  ENTKSLRGVIENGKKLIGKCEGVDQSILNFHKAPFYTKKLRQLNAEFGRASQNLLLQMNV 124

Query: 126 QHMKKLQTLEINNNRHGRPRLLASKIVDKGKIVIKKIFMGESSINNNDCSCGLHGYVPNY 185
           Q +++   + +N N  GR  LL    ++K              + +  C C + G +PN 
Sbjct: 125 QQLRR---IPMNGNGSGRSVLLLQNTMEK--------------VTSIGCCCSVFGDLPN- 183

Query: 186 PTTKLPLLFYHDKRLKGK 202
              KLPLLFYHDKRLKGK
Sbjct: 185 -QIKLPLLFYHDKRLKGK 183

[Close]

BLAST of Lsi01G010010 vs. ExPASy TrEMBL
Match: A0A6J1IMX9 (uncharacterized protein LOC111478854 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478854 PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 2.7e-32
Identity = 88/198 (44.44%), Postives = 124/198 (62.63%), Query Frame = 0


Query: 6   LVAGAALGALLGELLKRVINLMEKAINFKPVLAEIKSQVEFLMPLMKQVDELGEDFQLEY 65
           LV GA LGAL GELLK ++NL EK+I+FKPVL +I++ +EFL  +++Q+D+    F    
Sbjct: 5   LVNGAVLGALFGELLKGILNLAEKSIHFKPVLEDIRAHLEFLSLVIQQLDDEHSGFLASP 64

Query: 66  SNT--LKEVVHQGKQLIMECDAAKQRFLKYHKFPSYTKRLRKLDAQLERASLNLLLQLSV 125
            NT  L+ V+  GK+LI +C+   Q  L +HK P YTK+LR+L+A+  RAS NLLLQ++V
Sbjct: 65  ENTKSLRGVIENGKKLIGKCEGVDQSILNFHKAPFYTKKLRQLNAEFGRASQNLLLQMNV 124

Query: 126 QHMKKLQTLEINNNRHGRPRLLASKIVDKGKIVIKKIFMGESSINNNDCSCGLHGYVPNY 185
           Q +++   + +N N  GR  LL    ++K              + +  C C + G +PN 
Sbjct: 125 QQLRR---IPMNGNGSGRSVLLLQNTMEK--------------VTSIGCCCSVFGDLPN- 183

Query: 186 PTTKLPLLFYHDKRLKGK 202
              KLPLLFYHDKRLKGK
Sbjct: 185 -QIKLPLLFYHDKRLKGK 183

[Close]

BLAST of Lsi01G010010 vs. NCBI nr
Match: XP_008440239.1 (PREDICTED: uncharacterized protein LOC103484755 [Cucumis melo])

HSP 1 Score: 191.4 bits (485), Expect = 7.4e-45
Identity = 116/210 (55.24%), Postives = 143/210 (68.10%), Query Frame = 0


Query: 1   MEGAELVAGAALGALLGELLKRVINLMEKAINFKPVLAEIKSQVEFLMPLMKQVDELGED 60
           M G EL+ GAALGALLGELLKRV+NLMEK ++FKP L  +KSQVEFLMPLM QVDELGED
Sbjct: 1   MVGEELLVGAALGALLGELLKRVLNLMEKTVHFKPELEGLKSQVEFLMPLMDQVDELGED 60

Query: 61  FQLEYSN---TLKEVVHQGKQLIMECD--AAKQRFLKYHKFPSYTKRLRKLDAQLERASL 120
           F+L YS+    LK ++++GKQLI EC+  A +    +Y K P YTK+LR+LDA+L+RA  
Sbjct: 61  FKLRYSDQTLKLKILINKGKQLIEECNYVAIQSTLSRYSKIPRYTKKLRRLDAELKRAES 120

Query: 121 NLLLQLSVQHMKKLQTLEINNNRHGRPRLLASKIVDKGKI----VIKKIFMGESSINNND 180
           NL L+L VQ M KLQ LE N N  GR      +I D+ K+    ++  +F GES INNN+
Sbjct: 121 NLRLELCVQQM-KLQALENNYNNGGR----RGRIRDRAKLFVTNILDNLFRGESGINNNE 180

Query: 181 CSCGLHGYVPNYPTTKLPLLFYHDKRLKGK 202
                          KLPLLFYHD+RLKGK
Sbjct: 181 YK------------IKLPLLFYHDRRLKGK 193

[Close]

BLAST of Lsi01G010010 vs. NCBI nr
Match: XP_031742634.1 (uncharacterized protein LOC101219966 isoform X2 [Cucumis sativus])

HSP 1 Score: 181.0 bits (458), Expect = 1.0e-41
Identity = 116/219 (52.97%), Postives = 143/219 (65.30%), Query Frame = 0


Query: 5   ELVAGAALGALLGELLKRVINLMEKAINFKPVLAEIKSQVEFLMPLMKQVDELGEDFQLE 64
           EL+ GAALGALLGELLK V+NLMEK+++FKP L  +KSQ+EFL PL+ QVDELGEDF+L 
Sbjct: 43  ELLVGAALGALLGELLKGVMNLMEKSVHFKPELELLKSQIEFLQPLVDQVDELGEDFKLR 102

Query: 65  YSN-TLKEVVHQGKQLIMEC-DAAKQRFL-KYHKFP-SYTKRLRKLDAQLERASLNLLLQ 124
           YS+ TLK ++ +GKQLI EC DAA Q  L +Y K    YTK LR+LDA+L+RA  NL L+
Sbjct: 103 YSDQTLKILIRKGKQLIRECNDAAIQNTLSRYFKIQLCYTKDLRRLDAELKRAGSNLRLE 162

Query: 125 LSVQHMKKLQTLEINNNRHGRPRLLASKIVDKGKIVI------------------KKIFM 184
           L VQ MKKLQ LEIN N  GR      +I+D+ K+++                   K+F 
Sbjct: 163 LYVQQMKKLQALEINYNNDGR----YGRILDRAKLIVTSILTHVGYNFTFVTNILDKLFS 222

Query: 185 GESSINNNDCSCGLHGYVPNYPTTKLPLLFYHDKRLKGK 202
           GES  NNN  +             KLPLLFYHD+RLKGK
Sbjct: 223 GESGSNNNKYN------------IKLPLLFYHDQRLKGK 245

[Close]

BLAST of Lsi01G010010 vs. NCBI nr
Match: XP_004142014.3 (uncharacterized protein LOC101219966 isoform X1 [Cucumis sativus] >KAE8647495.1 hypothetical protein Csa_002781 [Cucumis sativus])

HSP 1 Score: 181.0 bits (458), Expect = 1.0e-41
Identity = 116/219 (52.97%), Postives = 143/219 (65.30%), Query Frame = 0


Query: 5   ELVAGAALGALLGELLKRVINLMEKAINFKPVLAEIKSQVEFLMPLMKQVDELGEDFQLE 64
           EL+ GAALGALLGELLK V+NLMEK+++FKP L  +KSQ+EFL PL+ QVDELGEDF+L 
Sbjct: 43  ELLVGAALGALLGELLKGVMNLMEKSVHFKPELELLKSQIEFLQPLVDQVDELGEDFKLR 102

Query: 65  YSN-TLKEVVHQGKQLIMEC-DAAKQRFL-KYHKFP-SYTKRLRKLDAQLERASLNLLLQ 124
           YS+ TLK ++ +GKQLI EC DAA Q  L +Y K    YTK LR+LDA+L+RA  NL L+
Sbjct: 103 YSDQTLKILIRKGKQLIRECNDAAIQNTLSRYFKIQLCYTKDLRRLDAELKRAGSNLRLE 162

Query: 125 LSVQHMKKLQTLEINNNRHGRPRLLASKIVDKGKIVI------------------KKIFM 184
           L VQ MKKLQ LEIN N  GR      +I+D+ K+++                   K+F 
Sbjct: 163 LYVQQMKKLQALEINYNNDGR----YGRILDRAKLIVTSILTHVGYNFTFVTNILDKLFS 222

Query: 185 GESSINNNDCSCGLHGYVPNYPTTKLPLLFYHDKRLKGK 202
           GES  NNN  +             KLPLLFYHD+RLKGK
Sbjct: 223 GESGSNNNKYN------------IKLPLLFYHDQRLKGK 245

[Close]

BLAST of Lsi01G010010 vs. NCBI nr
Match: XP_008440240.1 (PREDICTED: uncharacterized protein LOC103484756 isoform X1 [Cucumis melo])

HSP 1 Score: 152.9 bits (385), Expect = 2.9e-33
Identity = 98/202 (48.51%), Postives = 126/202 (62.38%), Query Frame = 0


Query: 5   ELVAGAALGALLGELLKRVINLMEKAINFKPVLAEIKSQVEFLMPLMKQVDELGEDFQLE 64
           +L+ GAA+GALL +LL  V+ L+EKA++FKP L  +KSQV FLM LM QVDELGEDF+L 
Sbjct: 5   DLLGGAAVGALLAQLLNEVMKLIEKAVHFKPELEGLKSQVGFLMRLMDQVDELGEDFKLR 64

Query: 65  YSN---TLKEVVHQGKQLIMECD--AAKQRFLKYHKFPSYTKRLRKLDAQLERASLNLLL 124
           Y +    LK ++++GKQLI EC+  A +    +Y K P YTK+LRKLDA+L+ A  NL+L
Sbjct: 65  YFDQTLKLKILINKGKQLIEECNDVAIQSTLSRYSKIPRYTKKLRKLDAELKSAQSNLML 124

Query: 125 QLSVQHMKKLQTLEINNNRHGRPRLLASKIVDKGKIVIKKIFMGESSINNNDCSCGLHGY 184
            LSVQ   +L  LE N N +GR ++L            K+ F  E    NN+        
Sbjct: 125 ALSVQ---QLLALERNYNNNGRTQILD-----------KRPFRSEGGSTNNEYK------ 180

Query: 185 VPNYPTTKLPLLFYHDKRLKGK 202
                  KLPLLFYHDKRLKGK
Sbjct: 185 ------IKLPLLFYHDKRLKGK 180

[Close]

BLAST of Lsi01G010010 vs. NCBI nr
Match: XP_022979122.1 (uncharacterized protein LOC111478854 isoform X2 [Cucurbita maxima])

HSP 1 Score: 148.7 bits (374), Expect = 5.5e-32
Identity = 88/198 (44.44%), Postives = 124/198 (62.63%), Query Frame = 0


Query: 6   LVAGAALGALLGELLKRVINLMEKAINFKPVLAEIKSQVEFLMPLMKQVDELGEDFQLEY 65
           LV GA LGAL GELLK ++NL EK+I+FKPVL +I++ +EFL  +++Q+D+    F    
Sbjct: 5   LVNGAVLGALFGELLKGILNLAEKSIHFKPVLEDIRAHLEFLSLVIQQLDDEHSGFLASP 64

Query: 66  SNT--LKEVVHQGKQLIMECDAAKQRFLKYHKFPSYTKRLRKLDAQLERASLNLLLQLSV 125
            NT  L+ V+  GK+LI +C+   Q  L +HK P YTK+LR+L+A+  RAS NLLLQ++V
Sbjct: 65  ENTKSLRGVIENGKKLIGKCEGVDQSILNFHKAPFYTKKLRQLNAEFGRASQNLLLQMNV 124

Query: 126 QHMKKLQTLEINNNRHGRPRLLASKIVDKGKIVIKKIFMGESSINNNDCSCGLHGYVPNY 185
           Q +++   + +N N  GR  LL    ++K              + +  C C + G +PN 
Sbjct: 125 QQLRR---IPMNGNGSGRSVLLLQNTMEK--------------VTSIGCCCSVFGDLPN- 183

Query: 186 PTTKLPLLFYHDKRLKGK 202
              KLPLLFYHDKRLKGK
Sbjct: 185 -QIKLPLLFYHDKRLKGK 183

[Close]

BLAST of Lsi01G010010 vs. TAIR 10
Match: AT5G66630.1 (DA1-related protein 5 )

HSP 1 Score: 46.2 bits (108), Expect = 3.6e-05
Identity = 37/129 (28.68%), Postives = 69/129 (53.49%), Query Frame = 0


Query: 4   AELVAGAALGALLGELLKRVINLMEKAINFKPVLAEIKSQVEFLMPLMKQVD--ELGEDF 63
           A LV GAALGA L E+ K VI   +K  +FKP+  ++ S +E L+P+  ++D  + G + 
Sbjct: 7   ASLVGGAALGAPLSEIFKLVIEEAKKVKDFKPLSQDLASTMERLVPIFNEIDMMQQGSNR 66

Query: 64  QLEYSNTLKEVVHQGKQLIMECDAAKQRFLKYHKFPSYTKRLRKLDAQLERASLNLLLQL 123
                  L E + +  +++ +C  ++ ++    K   YT+ ++ ++    +    + LQL
Sbjct: 67  GTSELKVLTETMERAGEMVHKC--SRIQWYSIAKKALYTREIKAINQDFLK-FCQIELQL 126

Query: 124 SVQHMKKLQ 131
            +QH  +LQ
Sbjct: 127 -IQHRNQLQ 131

[Close]

BLAST of Lsi01G010010 vs. TAIR 10
Match: AT5G66910.1 (Disease resistance protein (CC-NBS-LRR class) family )

HSP 1 Score: 41.6 bits (96), Expect = 8.9e-04
Identity = 33/131 (25.19%), Postives = 73/131 (55.73%), Query Frame = 0


Query: 9   GAALGALLGELLKRVINLMEKAINFKPVLAEIKSQVEFLMPLMKQVDELGEDFQLEYSNT 68
           G+  GAL+ E LK +I+  +K + FK V  E+ S +E L+P++K+++ + +  +L+    
Sbjct: 12  GSVAGALVSEGLKVLISEAKKVLAFKSVSNELASTMESLLPVIKEIESMQDGMELQ---D 71

Query: 69  LKEVVHQGKQLIMECDAAKQRFLKYHKFPSYTKRLRKLDAQ-LERASLNLLLQLSVQHMK 128
           LK+ + +   L+ +C   ++  +       YT+++ +++ + L+   + L L L    +K
Sbjct: 72  LKDTIDKALLLVEKCSHVEKWNIILKS--KYTRKVEEINRKMLKFCQVQLQLLLFRNQLK 131

Query: 129 KLQTLE--INN 137
            + ++E  +NN
Sbjct: 132 SMPSMEAILNN 137

The following BLAST results are available for this feature:

BLAST of Lsi01G010010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84WJ0	5.1e-04	28.68	Protein DA1-related 5 OS=Arabidopsis thaliana OX=3702 GN=DAR5 PE=2 SV=2	[more]

BLAST of Lsi01G010010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B0M1	3.6e-45	55.24	uncharacterized protein LOC103484755 OS=Cucumis melo OX=3656 GN=LOC103484755 PE=...	[more]
A0A0A0KFQ5	4.9e-42	52.97	RPW8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G490150 PE=3 S...	[more]
A0A1S3B199	1.4e-33	48.51	uncharacterized protein LOC103484756 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1IPW2	2.7e-32	44.44	uncharacterized protein LOC111478854 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1IMX9	2.7e-32	44.44	uncharacterized protein LOC111478854 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Lsi01G010010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440239.1	7.4e-45	55.24	PREDICTED: uncharacterized protein LOC103484755 [Cucumis melo]	[more]
XP_031742634.1	1.0e-41	52.97	uncharacterized protein LOC101219966 isoform X2 [Cucumis sativus]	[more]
XP_004142014.3	1.0e-41	52.97	uncharacterized protein LOC101219966 isoform X1 [Cucumis sativus] >KAE8647495.1 ...	[more]
XP_008440240.1	2.9e-33	48.51	PREDICTED: uncharacterized protein LOC103484756 isoform X1 [Cucumis melo]	[more]
XP_022979122.1	5.5e-32	44.44	uncharacterized protein LOC111478854 isoform X2 [Cucurbita maxima]	[more]

BLAST of Lsi01G010010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66630.1	3.6e-05	28.68	DA1-related protein 5	[more]
AT5G66910.1	8.9e-04	25.19	Disease resistance protein (CC-NBS-LRR class) family	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008808	Powdery mildew resistance protein, RPW8 domain	PFAM	PF05659	RPW8	coord: 4..129 e-value: 3.8E-19 score: 68.7
IPR008808	Powdery mildew resistance protein, RPW8 domain	PROSITE	PS51153	RPW8	coord: 1..163 score: 10.236588
None	No IPR available	PANTHER	PTHR36766:SF3	PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8	coord: 4..130
IPR039203	Disease resistance protein, RPW8-like	PANTHER	PTHR36766	PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8	coord: 4..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G010010.1	Lsi01G010010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050832	defense response to fungus