
Lsi01G009880 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATAGGCTGTTGGAGTTGAAAATCTTAACTCGTGTATTGCACGTGAGAAGAAAGTGCAGCATCATATATATATATATATATATAAAGATTATGAGATATGTAGAGAGAAAAAAATGGGTTTTTTTTTCTGTAAAGGGAAATCCAATTTTTCTGCCCCGTCGGTTGCTGGAAGACAAAAGACATTCAAACACACATGCAAGCCACAATAAAAATCAGTATTATTATTAATTTTGTACAAATTCATTGGGCCGCCATTTACTTTGCCTTTTCTAATAATATAATATATCATTTAAACATCGCAAAATTCCCTCCTTCTGGCTTGTCTTCTCGCAGCTCTGTGTGTGTATTATTAAAATATATATATATATATATGGCCAAGGCCAAGTTGGATCCTAAAAAGACAGCCTTTTTTTTAACGTTATATAAATACTAAGAAAAACAAGTGGTTGTATTAAATTTAATAGAATAATCAAAAGAAATGAGACGACAGCAAAACAGCAAGTGAGCGACTTTCCCTAAGCCTCGGAACTCTCCTTCTCTCTCTCCCACTTGACCTTTTATTTTACCTTAATTTTCGGTAACCGCCACAGAATCTGCTCATTTCCTTTTACTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTCTATTGATGAAATGAAATGGGTAGGCATCATTCAGTCATTTAATTGAATAGATGGAAAACCCTTTTCTTCTTTTTGCAAAGGTTCATTCTTCTTCAAGATTTTGGACAGTGGGGTTCCGGACAACTTTGATTTGATTAATTTCACTTCAATGAATTGAGAAGACTTTCTTAACATATCATTTTCCTTTTTCAAATAAAAAATATATATATATATATATATATATATAACTATTTAGTAGTTATACACAACATTACATTATATATACTTTTTGTAAGCGCTTATATTTATATATTAATAGAATAAATTCCACTATCCCAATAAGTGTACTCAAAAAGTGGAGAGACCTATTAACAAAAGATCCAGAGTAAAAGAAGTCCATTCGCATAAGGGAGGGGTAGCCCTTGTTAGTTTTTTAAAAAAGCAAAAAGACAATTTACAAATTGAGAGTGTAAAATAGTCTTTAACAAAATGAACGGCACAAAATTGATAGAGAGAAAGATAGTGGGAATGTTGTTGGGAGTGGAAAAGGGTGCATGCGGAATAGTGGAGGAAAGGACACTTTAAAATATATATCAAAAGAAAAAATTACATTTTTATTATTATAATTATTATTTTGCGTTAATGAAAAGGCAGAATATAGCCCTAGAGCTGTTCCAAAGGTTAATTAAAAGAGAGAGAGAGAGAGATTAACCAAAGATCTTTAAAACTGAAAGAGAGGGTCCTAAACCTTTGGAAATATCTCTCAAAGTGAAGACCCCTATAACCTACCCCTACCTACTTCGTACTACCCTACCCTACCATAATGTATATATATACTTTTTTTAAAAAAACATTACATTATTAATTCAAAAAGTGAAGCATATGAGAGAATATCGACAACTAACAATAGCTAAAGTATTGCATATTTATTATTATTTTAAGGGTTTCTCTTATATAGTTGTTATAGGCCATCCATATTACTATTTCTCTTTCTTATTTAATTATTTAATTATTTAATTATTTATTTATTTATTTAACTCATATACTCCCAAATTCCCCAAGTCTACTACCCATATATATAGAAGGTTAGTAGTACACTCAAATTAGATCTCTCCTTTCAACTTCAAAAACACAAGGCAAAAAAATTCTCTCCTTTCTTTCTCTTTCATTTTTCTCTCTGAATATATATTATTATTGTTGTTATTTTTTTTAACAGATTATTGTTGTTATATAAAATGATGAAGAGAAGTGGTAGGGTTTGTGGGGTTTGTGTTATGATTATTGTTTTGGTTTTGTGTTTAACCCATGAGGGGGTTTACGTAGAATGCCGGCATTTGAAGGCCACAAGATGCAAGAAATGCTCCAAATTGGTCAGTGTTCCGCCGCAGCCGGTTAATCGGAATTCCGCCGGAAATGGTCAACAATTTATGACGAACAAAGCAGAATTACCTCAAGATTTTCGTCCCACATCGCCTGGCCATAGTCCTGGAGTTGGCCACCATATCAACAATTGA ATGCATAGGCTGTTGGAGTTGAAAATCTTAACTCGTGTATTGCACGGAAATCCAATTTTTCTGCCCCGTCGGTTGCTGGAAGACAAAAGACATTCAAACACACATGCAAGCCACAATAAAAATCAATTATTGTTGTTATATAAAATGATGAAGAGAAGTGGTAGGGTTTGTGGGGTTTGTGTTATGATTATTGTTTTGGTTTTGTGTTTAACCCATGAGGGGGTTTACGTAGAATGCCGGCATTTGAAGGCCACAAGATGCAAGAAATGCTCCAAATTGGTCAGTGTTCCGCCGCAGCCGGTTAATCGGAATTCCGCCGGAAATGGTCAACAATTTATGACGAACAAAGCAGAATTACCTCAAGATTTTCGTCCCACATCGCCTGGCCATAGTCCTGGAGTTGGCCACCATATCAACAATTGA ATGCATAGGCTGTTGGAGTTGAAAATCTTAACTCGTGTATTGCACGGAAATCCAATTTTTCTGCCCCGTCGGTTGCTGGAAGACAAAAGACATTCAAACACACATGCAAGCCACAATAAAAATCAATTATTGTTGTTATATAAAATGATGAAGAGAAGTGGTAGGGTTTGTGGGGTTTGTGTTATGATTATTGTTTTGGTTTTGTGTTTAACCCATGAGGGGGTTTACGTAGAATGCCGGCATTTGAAGGCCACAAGATGCAAGAAATGCTCCAAATTGGTCAGTGTTCCGCCGCAGCCGGTTAATCGGAATTCCGCCGGAAATGGTCAACAATTTATGACGAACAAAGCAGAATTACCTCAAGATTTTCGTCCCACATCGCCTGGCCATAGTCCTGGAGTTGGCCACCATATCAACAATTGA MHRLLELKILTRVLHGNPIFLPRRLLEDKRHSNTHASHNKNQLLLLYKMMKRSGRVCGVCVMIIVLVLCLTHEGVYVECRHLKATRCKKCSKLVSVPPQPVNRNSAGNGQQFMTNKAELPQDFRPTSPGHSPGVGHHINN Homology
BLAST of Lsi01G009880 vs. ExPASy Swiss-Prot
Match: P0DN97 (Precursor of CEP8 OS=Arabidopsis thaliana OX=3702 GN=CEP8 PE=2 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 7.8e-04 Identity = 24/78 (30.77%), Postives = 43/78 (55.13%), Query Frame = 0
BLAST of Lsi01G009880 vs. ExPASy TrEMBL
Match: A0A0A0KGB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490770 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 8.6e-22 Identity = 55/72 (76.39%), Postives = 60/72 (83.33%), Query Frame = 0
BLAST of Lsi01G009880 vs. ExPASy TrEMBL
Match: A0A061DGB8 (tRNA Delta(2)-isopentenylpyrophosphate transferase, putative OS=Theobroma cacao OX=3641 GN=TCM_000584 PE=3 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 4.4e-10 Identity = 44/93 (47.31%), Postives = 58/93 (62.37%), Query Frame = 0
BLAST of Lsi01G009880 vs. ExPASy TrEMBL
Match: A0A2C9URG2 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G126300 PE=3 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 9.9e-10 Identity = 43/88 (48.86%), Postives = 55/88 (62.50%), Query Frame = 0
BLAST of Lsi01G009880 vs. ExPASy TrEMBL
Match: A0A1R3K4N2 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_11385 PE=3 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 1.7e-09 Identity = 41/91 (45.05%), Postives = 57/91 (62.64%), Query Frame = 0
BLAST of Lsi01G009880 vs. ExPASy TrEMBL
Match: B9S8I9 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0601250 PE=3 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 3.8e-09 Identity = 42/90 (46.67%), Postives = 50/90 (55.56%), Query Frame = 0
BLAST of Lsi01G009880 vs. NCBI nr
Match: KAE8647497.1 (hypothetical protein Csa_004238, partial [Cucumis sativus]) HSP 1 Score: 146.4 bits (368), Expect = 1.9e-31 Identity = 74/96 (77.08%), Postives = 82/96 (85.42%), Query Frame = 0
BLAST of Lsi01G009880 vs. NCBI nr
Match: KAG6595044.1 (hypothetical protein SDJN03_11597, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 126.7 bits (317), Expect = 1.6e-25 Identity = 61/99 (61.62%), Postives = 74/99 (74.75%), Query Frame = 0
BLAST of Lsi01G009880 vs. NCBI nr
Match: EOX91365.1 (TRNA Delta(2)-isopentenylpyrophosphate transferase, putative [Theobroma cacao]) HSP 1 Score: 74.3 bits (181), Expect = 9.2e-10 Identity = 44/93 (47.31%), Postives = 58/93 (62.37%), Query Frame = 0
BLAST of Lsi01G009880 vs. NCBI nr
Match: OAY33803.1 (hypothetical protein MANES_13G126300v8 [Manihot esculenta]) HSP 1 Score: 73.2 bits (178), Expect = 2.0e-09 Identity = 43/88 (48.86%), Postives = 55/88 (62.50%), Query Frame = 0
BLAST of Lsi01G009880 vs. NCBI nr
Match: OMP02045.1 (hypothetical protein COLO4_11385 [Corchorus olitorius]) HSP 1 Score: 72.4 bits (176), Expect = 3.5e-09 Identity = 41/91 (45.05%), Postives = 57/91 (62.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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