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Lsi01G009750 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTACATTGGTTGAAGTGCTTTTCAAGATTCCCATCATCTTCAATGCGTAGTTCGTCGACTTTCATACATTCTAATTTATAATAAATCTGATGTGATTCTCAATTTGGCTGTGTCCTTCTTTGATGACCCTTTATTCCAAACCCTCTAATTCACTCCATTTTATAGTAACCAAAGGGAAGCAAGCTAAGCTAAGGTCGCTCCCTGCTGTCCTTCTACCCTCCCGCCAAAAGGAAACAAAGTGAAAAAAAAAAAGAAAAAAAAGAAAAAAAAAAAGTTTCCAAACACTCCCACGAACCATAGCTGTATTGGACAAAAATGGACGGAAGAATAGTGTCAAAAGCAAAATTCTATGGATAGAGACGTAGGGAAAAAGCAAAACCCAAACACCCTTCTTACTGTGTTGTACTGTTCATAATGAAGGAAAGAAGTTGCAGTTCTTCCCACAATTTCAGTGCGTTTCCAAGCCCTGGAGTCCCAAATTACTGGGAAATTAATGTCATGAACCAAAGGGGTTGCAGCTCCGAGCGAATACCTCAGCCTAATAGCAACACCCGCCGGAGAAATGCCTCTGTCGCCGCCTTGACGCCCTTTTTCGGTAGGACACTGCCCTCCAAATGGGAGGATGCCGAGCGATGGATTAGTAGCCCTGTTATGGGCAATGGGTTCAGCAGGACTTTGCAGTCTCACCTACAGAGAAGACCCAAGTCCAAGAGTGGCCCTATTGGGTCGCCTGGAGTTTCTAATTACTCCCATTATTCACCTGCAATTCCAACACTCGAGAATGGGGCTTTTGCCGCCTCCAAATTAGGCTCTGCTCTTTCCACTGGAGTCTTAGTGGCTGATGGGGTTTCTATCTGCTATGGCGGTAGCATTGAAAGGGGACAATCTTACCCAGAGTGTACCATCCAACGATTAGTTTCTGCACCCAGATGGTCAAATATACTGAGCGAGTCGCCGCTGCCTAGCTTTCAAGGTATCTCTTTCTTCACCCTTTATTTTCTGGGTAGTTTTGAAGCAATCTGTATAGTTTTGGCTGAACTGGAAGTCATTTGTCTTTAGTATTAAATAATGCTCATGTTGGTTGCTTGTATTAATTGTTAATGTTAAGTACAGTACAGTTTCTATGCGACAGTGATTGAGTGGAAAATAAAGTCTCTCTAACTTTCATATCTGCTTAGAAGTTAGATCACAGTAATATTAGGCTGGGATTAAGTTGTCTCTTCATCTTCATTCTTAAAGAGCTCAACATTGTGGAGATCCATTTTGTTGAGATATTGAAGATAGTTAGAAATTGGTGGTTCTCAAGATGTTCTTTGTGGCACTTGTATCATATCCACAGATGAAAAATATGGTGGTTCCGATGAGACAATGGATTCAGGCGTTGTTTCACAGAGGAATATGGCAACACAAATGAGCAGTGAAGATTTCACACCTTTATCTCCTCAGGGGAATGGTTCCATTTCCTCTTCATCCCCTTCAACACGTCAATCTATGGTTGTAAAAGAGAGCGACCATTGTTCTAAACAAGAAGTGAGAGATGTTGAGGTAGACAAGGGAGCCACGGTGATGCAGAGATTCAAAGGGCATAAACTCAGATTGACCGACGAAAACTTTCCACACCTTGGAAACTTGGATGAGAATGTTGCGGAAGCTGGAGCTTCATCTCTGGATATTGCAGAGGCAGCTATTCAGGTTTCCAAGTAGGGTGTTCTTTTCATCATTTTTAAGTGCTGTTAATTTTAGAGAAAATTTTATGTTCTAATTTTGTCCTTATTTGAATGTATAAAAAATCTAACGTAGAAGTTTTAATTTCGTTGGATTGATCTTGAACTTAACTAAATGGTAAAATTGATACTCTTTATTATCTGATTTGGTAACGTTTCATAGGAATTTACATACAAGCGTGGACTACTTTTTTGAATCCTAGTTTTGTAGTTGTGTTGCTCAATTATCTTGCTTGCTTTTTGAGTGTTTTGGTGTTGTTTGAGCCTAGTTGTTATCTGTTGAATTCCCAGACTAAGATTGGTTGTTTTTGTTGTTGGATTTAGCCATTTTGTATCCGGGCAGTAGTTGTTGTGTTGATTGGATTTGAAGTGATGTTTTAGTTCTTGGTTTGTTTATTAGCACTTTTCTAAGTTGGTTTTGAGAGAAAATATTGATTTACCAATCATTCAAGTTCAGGATTCAATTCATTAGAATTAAACCTTTCAATTTAACTAACTCAACTAAGTACATGAATCCAAAAACAAACAAACAAATTTACTTTTTCTTTAGTTCTCTCTACTATATTAAAAATCAATGCCAGTCACAGGGTTCAAACTTCCAACATTGCTTTATCTTGATCTCCGTTCTCTTTTAGATTGATATTTTTGTCTACATACCTAAAAGATTTTAAGCTTCCCATGACCTGTAAAATCAATTATCTACCATATATCCTTGAACTAGAATTCCCGGTCTTTGCTTAGGAAATAANAATTAAATTATTACAAATATTGATAACATAAATGACTAAATTGTAACCTGTTAAAATTTACGACTAAATTATTACAAATTAAAAAATATATATAAACTAAATTATTACAAATCAAAATTTAAGTACTAAATCTTTATTTAAATAAAAGTCCACAAACCAAAAGTGAATATTAACCTTAGAATTATAATGCTATATTGAAAGATGAAAGAGGGAGACAAAAAAAAAAAAAAAAAAAAAAAAGTATCCACTAATTCGAATTGTAATGTTTAGGTTGCAGAGAGAAGAAGCCAAGATAACAGCATGGGAGAATTTGCAGAAGGCGAAAGCTGAAGCTGCAATTCGCAAACTCGAGGTTAGGCCTGTTTTTAGCTTCAACATGTGCAACTTTCACTCTGTTTTATTGGAAAAAGAAATGGAGAGAGAAAATAGAGAAATCCTAGAATGTTATAAGAAGTTGCTCCTGGTGAAAGGTTAAAGCAGCTTCTTCTATTGGTGGATTTCTTTTCCCCAACATTGCATTTGAATTCAAAACAATAGAATTGTCATGAATGTTGATCTTGGTCAAATTAGAATGGCAATGTACTAGAACTAGAAGAAGCTATGTGGTTCACTGACGATGAGCCTTGTTGATTCAGATGAAACTTGAAAAGGCAAGATCATCATCAATGGATAAGATATTGAAGAAGCTGAGGAAGGCACAGATGAAAGCACACAAAATGAGGAACTCACCTGCAGGCGACCGAAACCAGAGAGTTCAAAACACTGACAACTTTCTCCCATTTCACAAGCACGTATGGATTGGTTCCCTCAAGCGTTGGTTCATCTGCCATGCTTCCTGATTTCTCAAGGTAGCATTTGATGGTTTCGTCGTCTTAGAAATTTACACTAGCTTAGCTTGGTTGGTTCTGTGTCGTTGTAGATCTTGCACTGTACACTTGTTCTAGAAGAAGGAAGTAATAATAGCTGGCTTATGGCTGTTGAGCAGGAAATATTGATGTACCTCATGTTTTGAATTGCCACCCAATTTGATATCAGGTTGTAGAAAAAGGCTGAAATAGAGTACTGTCCAGCAATGGCTGAGACATGCCATACAAATTAAGGACTCATTTAATGAGAGATTAGTTGAGTTAGGTTCAAACTAATTCTGATCACTCTCAATAATTTATTATAAAAACAGTGGTTGATGTAAGCAACCAAAAGAATGAGCAAAACAATTGCAATAGACGAGATGAGAGTTTTCACATTGGATCATTGGGCCTTCCACCTTTGATCTTAAAAACCCCACTTTCACAGAACAGGGAATTGAGTTTTATCATACTTTAATATTAATTATCACGTTAATGTCTTCATTATTTCCAGACGATTACTAAAAAGGTAATTTACCTTATAATTAAAGTACTAATAGTTCTAACATAGGATTCTATATTTGAAATGTTAACTTGAGCATAATGTATGAGGTAAGTACGTACAAATGTTCACCCATCCTTGTGTTTGAACTCAGAAAAAGAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAATACAATTTTATACCTTGACATTGATATATATAATTGGGCAAATTGATTACTGAAGTTTATAATTTAAAAATTGTGATGGATAATAAGTCTTTATTTTATTTTAAGTTCAACAATATTATGTAAGGCGGAGAAATTTGATCTCTCATAATTGAT TCTACATTGGTTGAAGTGCTTTTCAAGATTCCCATCATCTTCAATGCGTAGTTCGTCGACTTTCATACATTCTAATTTATAATAAATCTGATGTGATTCTCAATTTGGCTGTGTCCTTCTTTGATGACCCTTTATTCCAAACCCTCTAATTCACTCCATTTTATAGTAACCAAAGGGAAGCAAGCTAAGCTAAGGTCGCTCCCTGCTGTCCTTCTACCCTCCCGCCAAAAGGAAACAAAGTGAAAAAAAAAAAGAAAAAAAAGAAAAAAAAAAAGTTTCCAAACACTCCCACGAACCATAGCTGTATTGGACAAAAATGGACGGAAGAATAGTGTCAAAAGCAAAATTCTATGGATAGAGACGTAGGGAAAAAGCAAAACCCAAACACCCTTCTTACTGTGTTGTACTGTTCATAATGAAGGAAAGAAGTTGCAGTTCTTCCCACAATTTCAGTGCGTTTCCAAGCCCTGGAGTCCCAAATTACTGGGAAATTAATGTCATGAACCAAAGGGGTTGCAGCTCCGAGCGAATACCTCAGCCTAATAGCAACACCCGCCGGAGAAATGCCTCTGTCGCCGCCTTGACGCCCTTTTTCGGTAGGACACTGCCCTCCAAATGGGAGGATGCCGAGCGATGGATTAGTAGCCCTGTTATGGGCAATGGGTTCAGCAGGACTTTGCAGTCTCACCTACAGAGAAGACCCAAGTCCAAGAGTGGCCCTATTGGGTCGCCTGGAGTTTCTAATTACTCCCATTATTCACCTGCAATTCCAACACTCGAGAATGGGGCTTTTGCCGCCTCCAAATTAGGCTCTGCTCTTTCCACTGGAGTCTTAGTGGCTGATGGGGTTTCTATCTGCTATGGCGGTAGCATTGAAAGGGGACAATCTTACCCAGAGTGTACCATCCAACGATTAGTTTCTGCACCCAGATGGTCAAATATACTGAGCGAGTCGCCGCTGCCTAGCTTTCAAGATGAAAAATATGGTGGTTCCGATGAGACAATGGATTCAGGCGTTGTTTCACAGAGGAATATGGCAACACAAATGAGCAGTGAAGATTTCACACCTTTATCTCCTCAGGGGAATGGTTCCATTTCCTCTTCATCCCCTTCAACACGTCAATCTATGGTTGTAAAAGAGAGCGACCATTGTTCTAAACAAGAAGTGAGAGATGTTGAGGTAGACAAGGGAGCCACGGTGATGCAGAGATTCAAAGGGCATAAACTCAGATTGACCGACGAAAACTTTCCACACCTTGGAAACTTGGATGAGAATGTTGCGGAAGCTGGAGCTTCATCTCTGGATATTGCAGAGGCAGCTATTCAGGTTTCCAAGTTGCAGAGAGAAGAAGCCAAGATAACAGCATGGGAGAATTTGCAGAAGGCGAAAGCTGAAGCTGCAATTCGCAAACTCGAGATGAAACTTGAAAAGGCAAGATCATCATCAATGGATAAGATATTGAAGAAGCTGAGGAAGGCACAGATGAAAGCACACAAAATGAGGAACTCACCTGCAGGCGACCGAAACCAGAGAGTTCAAAACACTGACAACTTTCTCCCATTTCACAAGCACGTATGGATTGGTTCCCTCAAGCGTTGGTTCATCTGCCATGCTTCCTGATTTCTCAAGGTAGCATTTGATGGTTTCGTCGTCTTAGAAATTTACACTAGCTTAGCTTGGTTGGTTCTGTGTCGTTGTAGATCTTGCACTGTACACTTGTTCTAGAAGAAGGAAGTAATAATAGCTGGCTTATGGCTGTTGAGCAGGAAATATTGATGTACCTCATGTTTTGAATTGCCACCCAATTTGATATCAGGTTGTAGAAAAAGGCTGAAATAGAGTACTGTCCAGCAATGGCTGAGACATGCCATACAAATTAAGGACTCATTTAATGAGAGATTAGTTGAGTTAGGTTCAAACTAATTCTGATCACTCTCAATAATTTATTATAAAAACAGTGGTTGATGTAAGCAACCAAAAGAATGAGCAAAACAATTGCAATAGACGAGATGAGAGTTTTCACATTGGATCATTGGGCCTTCCACCTTTGATCTTAAAAACCCCACTTTCACAGAACAGGGAATTGAGTTTTATCATACTTTAATATTAATTATCACGTTAATGTCTTCATTATTTCCAGACGATTACTAAAAAGGTAATTTACCTTATAATTAAAGTACTAATAGTTCTAACATAGGATTCTATATTTGAAATGTTAACTTGAGCATAATGTATGAGGTAAGTACGTACAAATGTTCACCCATCCTTGTGTTTGAACTCAGAAAAAGAAAAAAAAAAAAAAAATACAATTTTATACCTTGACATTGATATATATAATTGGGCAAATTGATTACTGAAGTTTATAATTTAAAAATTGTGATGGATAATAAGTCTTTATTTTATTTTAAGTTCAACAATATTATGTAAGGCGGAGAAATTTGATCTCTCATAATTGAT ATGAAGGAAAGAAGTTGCAGTTCTTCCCACAATTTCAGTGCGTTTCCAAGCCCTGGAGTCCCAAATTACTGGGAAATTAATGTCATGAACCAAAGGGGTTGCAGCTCCGAGCGAATACCTCAGCCTAATAGCAACACCCGCCGGAGAAATGCCTCTGTCGCCGCCTTGACGCCCTTTTTCGGTAGGACACTGCCCTCCAAATGGGAGGATGCCGAGCGATGGATTAGTAGCCCTGTTATGGGCAATGGGTTCAGCAGGACTTTGCAGTCTCACCTACAGAGAAGACCCAAGTCCAAGAGTGGCCCTATTGGGTCGCCTGGAGTTTCTAATTACTCCCATTATTCACCTGCAATTCCAACACTCGAGAATGGGGCTTTTGCCGCCTCCAAATTAGGCTCTGCTCTTTCCACTGGAGTCTTAGTGGCTGATGGGGTTTCTATCTGCTATGGCGGTAGCATTGAAAGGGGACAATCTTACCCAGAGTGTACCATCCAACGATTAGTTTCTGCACCCAGATGGTCAAATATACTGAGCGAGTCGCCGCTGCCTAGCTTTCAAGATGAAAAATATGGTGGTTCCGATGAGACAATGGATTCAGGCGTTGTTTCACAGAGGAATATGGCAACACAAATGAGCAGTGAAGATTTCACACCTTTATCTCCTCAGGGGAATGGTTCCATTTCCTCTTCATCCCCTTCAACACGTCAATCTATGGTTGTAAAAGAGAGCGACCATTGTTCTAAACAAGAAGTGAGAGATGTTGAGGTAGACAAGGGAGCCACGGTGATGCAGAGATTCAAAGGGCATAAACTCAGATTGACCGACGAAAACTTTCCACACCTTGGAAACTTGGATGAGAATGTTGCGGAAGCTGGAGCTTCATCTCTGGATATTGCAGAGGCAGCTATTCAGGTTTCCAAGTTGCAGAGAGAAGAAGCCAAGATAACAGCATGGGAGAATTTGCAGAAGGCGAAAGCTGAAGCTGCAATTCGCAAACTCGAGATGAAACTTGAAAAGGCAAGATCATCATCAATGGATAAGATATTGAAGAAGCTGAGGAAGGCACAGATGAAAGCACACAAAATGAGGAACTCACCTGCAGGCGACCGAAACCAGAGAGTTCAAAACACTGACAACTTTCTCCCATTTCACAAGCACGTATGGATTGGTTCCCTCAAGCGTTGGTTCATCTGCCATGCTTCCTGA MKERSCSSSHNFSAFPSPGVPNYWEINVMNQRGCSSERIPQPNSNTRRRNASVAALTPFFGRTLPSKWEDAERWISSPVMGNGFSRTLQSHLQRRPKSKSGPIGSPGVSNYSHYSPAIPTLENGAFAASKLGSALSTGVLVADGVSICYGGSIERGQSYPECTIQRLVSAPRWSNILSESPLPSFQDEKYGGSDETMDSGVVSQRNMATQMSSEDFTPLSPQGNGSISSSSPSTRQSMVVKESDHCSKQEVRDVEVDKGATVMQRFKGHKLRLTDENFPHLGNLDENVAEAGASSLDIAEAAIQVSKLQREEAKITAWENLQKAKAEAAIRKLEMKLEKARSSSMDKILKKLRKAQMKAHKMRNSPAGDRNQRVQNTDNFLPFHKHVWIGSLKRWFICHAS Homology
BLAST of Lsi01G009750 vs. ExPASy Swiss-Prot
Match: Q7XII4 (Remorin 4.1 OS=Oryza sativa subsp. japonica OX=39947 GN=REM4.1 PE=1 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 9.1e-05 Identity = 37/116 (31.90%), Postives = 58/116 (50.00%), Query Frame = 0
BLAST of Lsi01G009750 vs. ExPASy TrEMBL
Match: A0A1S3B0Q2 (uncharacterized protein LOC103484775 OS=Cucumis melo OX=3656 GN=LOC103484775 PE=3 SV=1) HSP 1 Score: 714.5 bits (1843), Expect = 2.4e-202 Identity = 368/402 (91.54%), Postives = 383/402 (95.27%), Query Frame = 0
BLAST of Lsi01G009750 vs. ExPASy TrEMBL
Match: A0A0A0KLC7 (Remorin_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G490900 PE=3 SV=1) HSP 1 Score: 714.1 bits (1842), Expect = 3.2e-202 Identity = 370/402 (92.04%), Postives = 384/402 (95.52%), Query Frame = 0
BLAST of Lsi01G009750 vs. ExPASy TrEMBL
Match: A0A6J1HEJ0 (uncharacterized protein LOC111463248 OS=Cucurbita moschata OX=3662 GN=LOC111463248 PE=3 SV=1) HSP 1 Score: 694.9 bits (1792), Expect = 2.0e-196 Identity = 357/401 (89.03%), Postives = 370/401 (92.27%), Query Frame = 0
BLAST of Lsi01G009750 vs. ExPASy TrEMBL
Match: A0A6J1KX88 (uncharacterized protein LOC111497187 OS=Cucurbita maxima OX=3661 GN=LOC111497187 PE=3 SV=1) HSP 1 Score: 691.4 bits (1783), Expect = 2.2e-195 Identity = 354/401 (88.28%), Postives = 370/401 (92.27%), Query Frame = 0
BLAST of Lsi01G009750 vs. ExPASy TrEMBL
Match: A0A6J1BT18 (uncharacterized protein LOC111005291 OS=Momordica charantia OX=3673 GN=LOC111005291 PE=3 SV=1) HSP 1 Score: 670.6 bits (1729), Expect = 4.0e-189 Identity = 347/404 (85.89%), Postives = 369/404 (91.34%), Query Frame = 0
BLAST of Lsi01G009750 vs. NCBI nr
Match: XP_038883869.1 (uncharacterized protein LOC120074722 isoform X1 [Benincasa hispida]) HSP 1 Score: 756.1 bits (1951), Expect = 1.5e-214 Identity = 383/401 (95.51%), Postives = 392/401 (97.76%), Query Frame = 0
BLAST of Lsi01G009750 vs. NCBI nr
Match: XP_038883870.1 (uncharacterized protein LOC120074722 isoform X2 [Benincasa hispida]) HSP 1 Score: 722.6 bits (1864), Expect = 1.8e-204 Identity = 371/401 (92.52%), Postives = 379/401 (94.51%), Query Frame = 0
BLAST of Lsi01G009750 vs. NCBI nr
Match: XP_008440279.1 (PREDICTED: uncharacterized protein LOC103484775 [Cucumis melo]) HSP 1 Score: 714.5 bits (1843), Expect = 5.0e-202 Identity = 368/402 (91.54%), Postives = 383/402 (95.27%), Query Frame = 0
BLAST of Lsi01G009750 vs. NCBI nr
Match: XP_004141913.1 (uncharacterized protein LOC101216077 [Cucumis sativus] >KGN48526.1 hypothetical protein Csa_003791 [Cucumis sativus]) HSP 1 Score: 714.1 bits (1842), Expect = 6.5e-202 Identity = 370/402 (92.04%), Postives = 384/402 (95.52%), Query Frame = 0
BLAST of Lsi01G009750 vs. NCBI nr
Match: KAG7027057.1 (Remorin 4.1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 696.4 bits (1796), Expect = 1.4e-196 Identity = 356/401 (88.78%), Postives = 371/401 (92.52%), Query Frame = 0
BLAST of Lsi01G009750 vs. TAIR 10
Match: AT4G36970.1 (Remorin family protein ) HSP 1 Score: 201.1 bits (510), Expect = 1.7e-51 Identity = 166/399 (41.60%), Postives = 223/399 (55.89%), Query Frame = 0
BLAST of Lsi01G009750 vs. TAIR 10
Match: AT1G45207.2 (Remorin family protein ) HSP 1 Score: 189.1 bits (479), Expect = 6.8e-48 Identity = 159/408 (38.97%), Postives = 215/408 (52.70%), Query Frame = 0
BLAST of Lsi01G009750 vs. TAIR 10
Match: AT2G02170.1 (Remorin family protein ) HSP 1 Score: 65.1 bits (157), Expect = 1.5e-10 Identity = 87/347 (25.07%), Postives = 146/347 (42.07%), Query Frame = 0
BLAST of Lsi01G009750 vs. TAIR 10
Match: AT2G02170.2 (Remorin family protein ) HSP 1 Score: 65.1 bits (157), Expect = 1.5e-10 Identity = 87/347 (25.07%), Postives = 146/347 (42.07%), Query Frame = 0
BLAST of Lsi01G009750 vs. TAIR 10
Match: AT1G30320.1 (Remorin family protein ) HSP 1 Score: 48.5 bits (114), Expect = 1.4e-05 Identity = 71/316 (22.47%), Postives = 141/316 (44.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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