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Lsi01G009450 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGAACAGAGAAACGCCGAATCTAAATTCGCCGGCGATGCCCAGCCTCAGGATCTCCTCTTTATTTCTAATCATCCTGCTAATGGCCTCCCCACGGTTATTTCTTCTTCTAGATTGCAGACCGCTCCGGCCCGGTTCAACAATCGAGCGCCACCCTGTTCATAATGCCTCGGCTATTGCCGCCCACAACCCGGAAACAGCTGTATCGCCGCCGATAGATTCCGGTAGCAGCCGGATCGGAGGCGACGACGGCGGCGTAGCTTTTACTTTTGCTTCGGGGCCCAGCAGAAAGGGTGCTGGCCATTAA ATGCCGAACAGAGAAACGCCGAATCTAAATTCGCCGGCGATGCCCAGCCTCAGGATCTCCTCTTTATTTCTAATCATCCTGCTAATGGCCTCCCCACGGTTATTTCTTCTTCTAGATTGCAGACCGCTCCGGCCCGGTTCAACAATCGAGCGCCACCCTGTTCATAATGCCTCGGCTATTGCCGCCCACAACCCGGAAACAGCTGTATCGCCGCCGATAGATTCCGGTAGCAGCCGGATCGGAGGCGACGACGGCGGCGTAGCTTTTACTTTTGCTTCGGGGCCCAGCAGAAAGGGTGCTGGCCATTAA ATGCCGAACAGAGAAACGCCGAATCTAAATTCGCCGGCGATGCCCAGCCTCAGGATCTCCTCTTTATTTCTAATCATCCTGCTAATGGCCTCCCCACGGTTATTTCTTCTTCTAGATTGCAGACCGCTCCGGCCCGGTTCAACAATCGAGCGCCACCCTGTTCATAATGCCTCGGCTATTGCCGCCCACAACCCGGAAACAGCTGTATCGCCGCCGATAGATTCCGGTAGCAGCCGGATCGGAGGCGACGACGGCGGCGTAGCTTTTACTTTTGCTTCGGGGCCCAGCAGAAAGGGTGCTGGCCATTAA MPNRETPNLNSPAMPSLRISSLFLIILLMASPRLFLLLDCRPLRPGSTIERHPVHNASAIAAHNPETAVSPPIDSGSSRIGGDDGGVAFTFASGPSRKGAGH Homology
BLAST of Lsi01G009450 vs. ExPASy TrEMBL
Match: A0A5D3CR30 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004480 PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 5.0e-27 Identity = 73/104 (70.19%), Postives = 79/104 (75.96%), Query Frame = 0
BLAST of Lsi01G009450 vs. NCBI nr
Match: TYK12856.1 (hypothetical protein E5676_scaffold255G004480 [Cucumis melo var. makuwa]) HSP 1 Score: 130.2 bits (326), Expect = 1.0e-26 Identity = 73/104 (70.19%), Postives = 79/104 (75.96%), Query Frame = 0
BLAST of Lsi01G009450 vs. NCBI nr
Match: KAE8647506.1 (hypothetical protein Csa_003725 [Cucumis sativus]) HSP 1 Score: 116.3 bits (290), Expect = 1.5e-22 Identity = 66/106 (62.26%), Postives = 78/106 (73.58%), Query Frame = 0
BLAST of Lsi01G009450 vs. NCBI nr
Match: KAG6604156.1 (hypothetical protein SDJN03_04765, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 100.1 bits (248), Expect = 1.1e-17 Identity = 60/95 (63.16%), Postives = 69/95 (72.63%), Query Frame = 0
BLAST of Lsi01G009450 vs. NCBI nr
Match: KAG6595007.1 (hypothetical protein SDJN03_11560, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 80.5 bits (197), Expect = 9.3e-12 Identity = 46/89 (51.69%), Postives = 58/89 (65.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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